CmoCh04G023960 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G023960
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr04: 17856613 .. 17860011 (+)
RNA-Seq ExpressionCmoCh04G023960
SyntenyCmoCh04G023960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTTCTTCGCCAAAAACTGTCAACATTTATTCTCTCATCGTCCAAAATTTCCTTCTGTTCATCTATACGAAAACTTACCTCAATTGCAGCTGCAGATGAACTTATCAACAACGATGCAATCGTAAATTCAATATGCGATTCATTCACAAGACGCGAAAGCTGGGACACTCTAACTCGAAAATTCGAGACTCTGGAACTAAACGATTCGTTGGTCCAAAAAGTCTTGCTCAAATTCCAGCAGCTTGTTGATGCCAAACGCGCTCTAGGGTTCTTCCACTGGTCGGCTAAGAGGAAGAATTTCAATCATGGGTTTCAATCTTATGGTATTATGATTCATATTCTAGTGAAAGCTCGGTTGGTTATTGATGCTCGAGCTTTGCTCGAATCAATTTTGAAGAAAAATGAAGGTAGCTCTTTCAATTTCTCTATTGTAGATTCTCTATTGGATACTTATGAGGTGACTGATTCATCCCCATTTGTGTTCGATTTATTGATTCAAACTTGTGCTAAATTGAGATTGATTGATTTTGCTTTGAATATGAGTGCCCATTTGGAGGAACGTGGGTTCTCGTTGAGTTTGATAAGTTTCAATACTTTGCTTCATGTTGTGGAAAAATCTGACGAGAATCGTAAGGTTTGGAAGATTTATGAGCAAATGATTAGGAAAAGAGTTTACCCCAATGTGATTACTGTTAGGATCATGATCAATTCGTTGTGTAAGGAAGGTAAATTGCAAGAAATTTCTGATATGTTGAGTAGAATCCATGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATGGCTGTTTGATTTACAGGATTTTGGAGGAGGGGAGAGTTGAAGATGGTGTAATGTTGTTGAAGAGAATGTTGCAGAAAAACATGATTCTTGACGATATTGCTTATTCATTGATTCTCTATGCTAAACTGAAAATTGGGAATATAAAATCTGCACAGGAAGTGTTTGATGAAATGTCTAAAAGAGGATTTCAGGCAAATTCTTTCATTTATACATTGTTCATTGGCGCACATTGTAGAGGTGGAAGGATTGAAGAAGCTCATTGCTTGATGGAAGAGATGGAAAACATGGGTTTGAAGCCATATCCTGAAACCTTCAATCTTCTCATTGAAGGGTGTAGAGATTCAGAAGAAAGCTTGAGAATGTGTGAGAAAATGTTAGAAAGAGGGTTTGTTCCCAGTTGTTCATCTTTCAATGTGGCAATAGCTAAGATTTGTGAGGAAGGAGATGTGAAAAAGGCTAATGAAATGTTAACCACTTTATTAGATAAAGGGTTCTTGCCTGATGAAACCACTTACATCAATCTAATCATAGGATATGGGAAAATTGGTGAAACTCAGGAGATTCTTAAGCTATATTATGAAATGGATGCTAGATTACTGTCTCCTGGCGTGTCGGTTTTCTTTGCACTGATTGGGAGCTTTTGTCAATCTGGGAAACTAGAAGAAGCAGAGAAATATTTGAAGATTATGAAAGATAGGTCTATACAACCAAGTGTATCTATATATCAAACATTATCCTTGTTCTACTTGAAGAAGGGTAATAGAGCAAAGGCTCTAGAACACTATAATGAGATGATGTTCAATGGATAGAAGCTTTGTTTGTTTCTAAGCATTTGCAGGTTTTTATATGGAACTGACACGTCGATATGATATTCGTTCTCTTCTCTGGCAGAGTACTTGATGTTGAAAGAAGCTTACTCATTCGAAAGGTAAATTGGTGCCTTCTATTTATTTATGCCTATACTTTTACTTGGAAAGAAATCAGAGCTCTTCTGAATTCAATGGTTAGAAGTAAGTTACTGTGTCTTGATTTAGCCTGGCTGTAACAGCAAAGTCGTGATTTAGCCGAGCTGTTACAGCCCAAGTCCTGATTTAGCCCTAGATGTAACAACACAATTCCACTGCTAGTAGATATTGTCCACTTTGAATCGTTATATATCGTTATCAGTCTCACGGTTTTAAAACGCGCATGCTAGGAGAGGTTTCCACATTTTATAAGGAATACTTTGTTTTACTCTCCAACTGATGTGAGATTTCACATTGCCCTTCTACGATAAGAAAGGGCCAATTCGAATGGAACTTTTATCTTCAAGAAAACAGTGTTTATGCTTTTTTATGGGCTATTTTTGCTGATTCTTGAGGTTAAGTTTCTGCTTGAAGAAGGGTAATAGAGCAAAAGGTCTAGATGAGATGATGTTCTATGGATAGAAGCTTTATTTGTTTCAAGCATTTGCAGGTTTTTATATGGAATTGACTCGTTGATACTCGTTCTCTTTTCTGGCAGAGTACTCTATGTTTACCGACGCTTACTCATTCGAAGGTAATACACGTACTTTTACTTCGAAAGAAATCAGAGCTTTTGTTAGAAGTAAGTTATTGAGTCTTGATTTAGCCTAGCCATTCTATGATGAGGAAGGGTTCAATTCAAATGGAACTTTATCTTCAAGAAAACAGTGGTCATGCTTTTTTATTGGTAGTTTGTGCTGATTCTTGAGGTTAAGTTTTTGCATTTTTAGTCGATATATGAATTCCTTCTTATTAGTGTAGCTTGCACGGTCTAGTTGGCCTAATCCAATGAGCACCGGTCGATCTCAACCTCAGTTAATAAGTGTTGATCGGCCTCGGCCTCAGTCAATAGGAACTTTTAGGAATCACATACCTCTATAATGCTATGATATTGTTCAGTTTAAACTTAAGCTCTCATGACTTTGCTTTTGGTTTCCCCAAAATGCCTCGTACCAATGAAGATATATTCCTTTCTTATAAACCTAAATCCATGATCAACCCTCCCAACAATCCTCAATAGGAGCTGGTTTCCTTAACCGATTGGTTCCACTTAAATTCTGGTGTTTAATGTTCATCGTCTCCTTCTTCATTTAGTTTTGCTTTTCCATATTCTTGCTCATTTTGTTGAATGTGGAAATGACTTCAACTATTGTTACCAAAATTTGAAGAATGCAACGCATCTGATCTTCATGTGACAACAACGGTAAAATTTGTTTGAGAAAGGGAGGAAGAACAAGGCCTACAAAACAAAAGAAATATATACACTAATGTGATAGTGGCACATGCTCGCTTGAAGGTCAACCTTGACCTCTTCCGTGAGGTTGTTCATAGGGTCAGTCACAACCTCTTGTCGAGGCCAACCACATGTCTTATCTTCTTATTTGTTCCATGATTTGCTCTCCTTATTTGTTCGGTTCGGTTCGATTTGACTCGGGTTACTCTTTTCTTTATTGGTTTTGCCTAGATCCAATTTTAGCCCAAATAAAAAGTACACCATGCATTCTAGAGAATCAAAAAAACAACTACAACAATAAGGTATTAAAAATTAAGTTTAAAACTAATAAAAAATTAAAATAGAAAATATTGCCA

mRNA sequence

ATGGCATTTCTTCGCCAAAAACTGTCAACATTTATTCTCTCATCGTCCAAAATTTCCTTCTGTTCATCTATACGAAAACTTACCTCAATTGCAGCTGCAGATGAACTTATCAACAACGATGCAATCGTAAATTCAATATGCGATTCATTCACAAGACGCGAAAGCTGGGACACTCTAACTCGAAAATTCGAGACTCTGGAACTAAACGATTCGTTGGTCCAAAAAGTCTTGCTCAAATTCCAGCAGCTTGTTGATGCCAAACGCGCTCTAGGGTTCTTCCACTGGTCGGCTAAGAGGAAGAATTTCAATCATGGGTTTCAATCTTATGGTATTATGATTCATATTCTAGTGAAAGCTCGGTTGGTTATTGATGCTCGAGCTTTGCTCGAATCAATTTTGAAGAAAAATGAAGGTAGCTCTTTCAATTTCTCTATTGTAGATTCTCTATTGGATACTTATGAGGTGACTGATTCATCCCCATTTGTGTTCGATTTATTGATTCAAACTTGTGCTAAATTGAGATTGATTGATTTTGCTTTGAATATGAGTGCCCATTTGGAGGAACGTGGGTTCTCGTTGAGTTTGATAAGTTTCAATACTTTGCTTCATGTTGTGGAAAAATCTGACGAGAATCGTAAGGTTTGGAAGATTTATGAGCAAATGATTAGGAAAAGAGTTTACCCCAATGTGATTACTGTTAGGATCATGATCAATTCGTTGTGTAAGGAAGGTAAATTGCAAGAAATTTCTGATATGTTGAGTAGAATCCATGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATGGCTGTTTGATTTACAGGATTTTGGAGGAGGGGAGAGTTGAAGATGGTGTAATGTTGTTGAAGAGAATGTTGCAGAAAAACATGATTCTTGACGATATTGCTTATTCATTGATTCTCTATGCTAAACTGAAAATTGGGAATATAAAATCTGCACAGGAAGTGTTTGATGAAATGTCTAAAAGAGGATTTCAGGCAAATTCTTTCATTTATACATTGTTCATTGGCGCACATTGTAGAGGTGGAAGGATTGAAGAAGCTCATTGCTTGATGGAAGAGATGGAAAACATGGGTTTGAAGCCATATCCTGAAACCTTCAATCTTCTCATTGAAGGGTGTAGAGATTCAGAAGAAAGCTTGAGAATGTGTGAGAAAATGTTAGAAAGAGGGTTTGTTCCCAGTTGTTCATCTTTCAATGTGGCAATAGCTAAGATTTGTGAGGAAGGAGATGTGAAAAAGGCTAATGAAATGTTAACCACTTTATTAGATAAAGGGTTCTTGCCTGATGAAACCACTTACATCAATCTAATCATAGGATATGGGAAAATTGGTGAAACTCAGGAGATTCTTAAGCTATATTATGAAATGGATGCTAGATTACTGTCTCCTGGCGTGTCGGTTTTCTTTGCACTGATTGGGAGCTTTTGTCAATCTGGGAAACTAGAAGAAGCAGAGAAATATTTGAAGATTATGAAAGATAGGTCTATACAACCAAGTGTATCTATATATCAAACATTATCCTTGTTCTACTTGAAGAAGGGTAATAGAGCAAAGGCTCTAGAACACTATAATGAGATGATAGTACTTGATGTTGAAAGAAGCTTACTCATTCGAAAGAGTACTCTATGTTTACCGACGCTTACTCATTCGAAGGTAATACACGTACTTTTACTTCGAAAGAAATCAGAGCTTTTGTTAGAAGTAAGTTATTGAGTCTTGATTTAGCCTAGCCATTCTATGATGAGGAAGGGTTCAATTCAAATGGAACTTTATCTTCAAGAAAACAGTGGTCATGCTTTTTTATTGGTAGTTTGTGCTGATTCTTGAGGTTAAGTTTTTGCATTTTTAGTCGATATATGAATTCCTTCTTATTAGTGTAGCTTGCACGGTCTAGTTGGCCTAATCCAATGAGCACCGGTCGATCTCAACCTCAGTTAATAAGTGTTGATCGGCCTCGGCCTCAGTCAATAGGAACTTTTAGGAATCACATACCTCTATAATGCTATGATATTGTTCAGTTTAAACTTAAGCTCTCATGACTTTGCTTTTGGTTTCCCCAAAATGCCTCGTACCAATGAAGATATATTCCTTTCTTATAAACCTAAATCCATGATCAACCCTCCCAACAATCCTCAATAGGAGCTGGTTTCCTTAACCGATTGGTTCCACTTAAATTCTGGTGTTTAATGTTCATCGTCTCCTTCTTCATTTAGTTTTGCTTTTCCATATTCTTGCTCATTTTGTTGAATGTGGAAATGACTTCAACTATTGTTACCAAAATTTGAAGAATGCAACGCATCTGATCTTCATGTGACAACAACGGTAAAATTTGTTTGAGAAAGGGAGGAAGAACAAGGCCTACAAAACAAAAGAAATATATACACTAATGTGATAGTGGCACATGCTCGCTTGAAGGTCAACCTTGACCTCTTCCGTGAGGTTGTTCATAGGGTCAGTCACAACCTCTTGTCGAGGCCAACCACATGTCTTATCTTCTTATTTGTTCCATGATTTGCTCTCCTTATTTGTTCGGTTCGGTTCGATTTGACTCGGGTTACTCTTTTCTTTATTGGTTTTGCCTAGATCCAATTTTAGCCCAAATAAAAAGTACACCATGCATTCTAGAGAATCAAAAAAACAACTACAACAATAAGGTATTAAAAATTAAGTTTAAAACTAATAAAAAATTAAAATAGAAAATATTGCCA

Coding sequence (CDS)

ATGGCATTTCTTCGCCAAAAACTGTCAACATTTATTCTCTCATCGTCCAAAATTTCCTTCTGTTCATCTATACGAAAACTTACCTCAATTGCAGCTGCAGATGAACTTATCAACAACGATGCAATCGTAAATTCAATATGCGATTCATTCACAAGACGCGAAAGCTGGGACACTCTAACTCGAAAATTCGAGACTCTGGAACTAAACGATTCGTTGGTCCAAAAAGTCTTGCTCAAATTCCAGCAGCTTGTTGATGCCAAACGCGCTCTAGGGTTCTTCCACTGGTCGGCTAAGAGGAAGAATTTCAATCATGGGTTTCAATCTTATGGTATTATGATTCATATTCTAGTGAAAGCTCGGTTGGTTATTGATGCTCGAGCTTTGCTCGAATCAATTTTGAAGAAAAATGAAGGTAGCTCTTTCAATTTCTCTATTGTAGATTCTCTATTGGATACTTATGAGGTGACTGATTCATCCCCATTTGTGTTCGATTTATTGATTCAAACTTGTGCTAAATTGAGATTGATTGATTTTGCTTTGAATATGAGTGCCCATTTGGAGGAACGTGGGTTCTCGTTGAGTTTGATAAGTTTCAATACTTTGCTTCATGTTGTGGAAAAATCTGACGAGAATCGTAAGGTTTGGAAGATTTATGAGCAAATGATTAGGAAAAGAGTTTACCCCAATGTGATTACTGTTAGGATCATGATCAATTCGTTGTGTAAGGAAGGTAAATTGCAAGAAATTTCTGATATGTTGAGTAGAATCCATGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATGGCTGTTTGATTTACAGGATTTTGGAGGAGGGGAGAGTTGAAGATGGTGTAATGTTGTTGAAGAGAATGTTGCAGAAAAACATGATTCTTGACGATATTGCTTATTCATTGATTCTCTATGCTAAACTGAAAATTGGGAATATAAAATCTGCACAGGAAGTGTTTGATGAAATGTCTAAAAGAGGATTTCAGGCAAATTCTTTCATTTATACATTGTTCATTGGCGCACATTGTAGAGGTGGAAGGATTGAAGAAGCTCATTGCTTGATGGAAGAGATGGAAAACATGGGTTTGAAGCCATATCCTGAAACCTTCAATCTTCTCATTGAAGGGTGTAGAGATTCAGAAGAAAGCTTGAGAATGTGTGAGAAAATGTTAGAAAGAGGGTTTGTTCCCAGTTGTTCATCTTTCAATGTGGCAATAGCTAAGATTTGTGAGGAAGGAGATGTGAAAAAGGCTAATGAAATGTTAACCACTTTATTAGATAAAGGGTTCTTGCCTGATGAAACCACTTACATCAATCTAATCATAGGATATGGGAAAATTGGTGAAACTCAGGAGATTCTTAAGCTATATTATGAAATGGATGCTAGATTACTGTCTCCTGGCGTGTCGGTTTTCTTTGCACTGATTGGGAGCTTTTGTCAATCTGGGAAACTAGAAGAAGCAGAGAAATATTTGAAGATTATGAAAGATAGGTCTATACAACCAAGTGTATCTATATATCAAACATTATCCTTGTTCTACTTGAAGAAGGGTAATAGAGCAAAGGCTCTAGAACACTATAATGAGATGATAGTACTTGATGTTGAAAGAAGCTTACTCATTCGAAAGAGTACTCTATGTTTACCGACGCTTACTCATTCGAAGGTAATACACGTACTTTTACTTCGAAAGAAATCAGAGCTTTTGTTAGAAGTAAGTTATTGA

Protein sequence

MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLTRKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKARLVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFALNMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSLCKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDDIAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEEMENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMIVLDVERSLLIRKSTLCLPTLTHSKVIHVLLLRKKSELLLEVSY
Homology
[Close]
BLAST of CmoCh04G023960 vs. ExPASy Swiss-Prot
Match: Q3ECH5 (Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g66345 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.3e-134
Identity = 244/496 (49.19%), Postives = 343/496 (69.15%), Query Frame = 0 

Query: 42  IVNSICDSFTRRESWDTLTRKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKN 101
           +++ I  S    ++W+TL+ KF +++L+DSL++ +LL+F+    AK+AL FFHWS+  +N
Sbjct: 49  LIDYISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRN 108

Query: 102 FNHGFQSYGIMIHILVKARLVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPF 161
             HG +SY + IHILVKARL+IDARAL+ES L  +   S    +VDSLLDTYE++ S+P 
Sbjct: 109 LRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDS---DLVDSLLDTYEISSSTPL 168

Query: 162 VFDLLIQTCAKLRLIDFALNMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQM 221
           VFDLL+Q  AK+R ++   ++   L + GF+LS+I+ NTL+H   KS  +  VW+IYE  
Sbjct: 169 VFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECA 228

Query: 222 IRKRVYPNVITVRIMINSLCKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRV 281
           I KR+YPN IT+RIMI  LCKEG+L+E+ D+L RI G RC  S+IVN  L++R+LEE R+
Sbjct: 229 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 288

Query: 282 EDGVMLLKRMLQKNMILDDIAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLF 341
           E+ + LLKR+L KNM++D I YS+++YAK K G++ SA++VFDEM +RGF ANSF+YT+F
Sbjct: 289 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVF 348

Query: 342 IGAHCRGGRIEEAHCLMEEMENMGLKPYPETFNLLIEGCRD---SEESLRMCEKMLERGF 401
           +   C  G ++EA  L+ EME  G+ PY ETFN LI G       E+ L  CE M+ RG 
Sbjct: 349 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGL 408

Query: 402 VPSCSSFNVAIAKICEEGDVKKANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILK 461
           +PSCS+FN  +  + +  +V +ANE+LT  +DKGF+PDE TY +LI G+ +  +  + LK
Sbjct: 409 MPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALK 468

Query: 462 LYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYL 521
           L+YEM+ R +SPG  VF +LI   C  GK+E  EKYLKIMK R I+P+  IY  L   + 
Sbjct: 469 LFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQ 528

Query: 522 KKGNRAKALEHYNEMI 535
           K G++  A   YNEMI
Sbjct: 529 KIGDKTNADRVYNEMI 541

[Close]
BLAST of CmoCh04G023960 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-46
Identity = 128/459 (27.89%), Postives = 224/459 (48.80%), Query Frame = 0 

Query: 82  QLVDAKRALGFFHWSAKRKNF--NHGFQSYGIMIHILVKARLVIDARALLESILKKNEGS 141
           +LV  K AL F  W  K+     +H  Q   I  HILV+AR+   AR +L+ +   +  S
Sbjct: 46  RLVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKS 105

Query: 142 SFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFALNMSAHLEERGFSLSLISFN 201
           SF F    +L+ TY + +S+P V+D+LI+   +  +I  +L +   +   GF+ S+ + N
Sbjct: 106 SFVFG---ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCN 165

Query: 202 TLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSLCKEGKLQEISDMLSRIHGS 261
            +L  V KS E+  VW   ++M+++++ P+V T  I+IN LC EG  ++ S ++ ++  S
Sbjct: 166 AILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 225

Query: 262 RCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDDIAYSLILYAKLKIGNIKSA 321
             + +++    +++   ++GR +  + LL  M  K +  D   Y+++++   +   I   
Sbjct: 226 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 285

Query: 322 QEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEEMENMGLKPYPETFNLLIEG 381
             +  +M KR    N   Y   I      G++  A  L+ EM + GL P   TFN LI+G
Sbjct: 286 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 345

Query: 382 C---RDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTTLLDKGFLPD 441
                + +E+L+M   M  +G  PS  S+ V +  +C+  +   A      +   G    
Sbjct: 346 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 405

Query: 442 ETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYLK 501
             TY  +I G  K G   E + L  EM    + P +  + ALI  FC+ G+ + A++ + 
Sbjct: 406 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVC 465

Query: 502 IMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMIV 536
            +    + P+  IY TL     + G   +A+  Y  MI+
Sbjct: 466 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501

[Close]
BLAST of CmoCh04G023960 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.8e-45
Identity = 119/463 (25.70%), Postives = 227/463 (49.03%), Query Frame = 0 

Query: 76  VLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKARLVIDARALLESILKK 135
           +LLK Q   D    L F +W+   + F    +   I +HIL K +L   A+ L E +  K
Sbjct: 54  LLLKSQN--DQALILKFLNWANPHQFFT--LRCKCITLHILTKFKLYKTAQILAEDVAAK 113

Query: 136 NEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFALNMSAHLEERGFSLSL 195
                +   +  SL +TY++  S+  VFDL++++ ++L LID AL++    +  GF   +
Sbjct: 114 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGV 173

Query: 196 ISFNTLLHVVEKSDENRK-VWKIYEQMIRKRVYPNVITVRIMINSLCKEGKLQEISDMLS 255
           +S+N +L    +S  N      ++++M+  +V PNV T  I+I   C  G +     +  
Sbjct: 174 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 233

Query: 256 RIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDDIAYSLILYAKLKIG 315
           ++    C  +++    LI    +  +++DG  LL+ M  K +  + I+Y++++    + G
Sbjct: 234 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 293

Query: 316 NIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEEMENMGLKPYPETFN 375
            +K    V  EM++RG+  +   Y   I  +C+ G   +A  +  EM   GL P   T+ 
Sbjct: 294 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 353

Query: 376 LLIEG-CR--DSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTTLLDK 435
            LI   C+  +   ++   ++M  RG  P+  ++   +    ++G + +A  +L  + D 
Sbjct: 354 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 413

Query: 436 GFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEA 495
           GF P   TY  LI G+   G+ ++ + +  +M  + LSP V  +  ++  FC+S  ++EA
Sbjct: 414 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 473

Query: 496 EKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
            +  + M ++ I+P    Y +L   + ++    +A + Y EM+
Sbjct: 474 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512

[Close]
BLAST of CmoCh04G023960 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.6e-42
Identity = 134/489 (27.40%), Postives = 222/489 (45.40%), Query Frame = 0 

Query: 56  WDT--LTRKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMI 115
           WD   L + F+ L L    V +VL++ ++  D K A  FF WS  R  F H  +SY I+ 
Sbjct: 93  WDDPGLEKLFD-LTLAPIWVPRVLVELKE--DPKLAFKFFKWSMTRNGFKHSVESYCIVA 152

Query: 116 HILVKARLVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKL 175
           HIL  AR+  DA     S+LK+   S  +  + D L  T  V      VFD L      L
Sbjct: 153 HILFCARMYYDA----NSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDL 212

Query: 176 RLIDFALNMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITV 235
            +++ A+   + ++         S N LLH   K  +   V + ++ MI     P V T 
Sbjct: 213 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 272

Query: 236 RIMINSLCKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQ 295
            IMI+ +CKEG ++    +   +         +    +I    + GR++D V   + M  
Sbjct: 273 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 332

Query: 296 KNMILDDIAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEE 355
                D I Y+ ++    K G +    E + EM   G + N   Y+  + A C+ G +++
Sbjct: 333 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 392

Query: 356 AHCLMEEMENMGLKPYPETFNLLIE-GCR--DSEESLRMCEKMLERGFVPSCSSFNVAIA 415
           A     +M  +GL P   T+  LI+  C+  +  ++ R+  +ML+ G   +  ++   I 
Sbjct: 393 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 452

Query: 416 KICEEGDVKKANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSP 475
            +C+   +K+A E+   +   G +P+  +Y  LI G+ K       L+L  E+  R + P
Sbjct: 453 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 512

Query: 476 GVSVFFALIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHY 535
            + ++   I   C   K+E A+  +  MK+  I+ +  IY TL   Y K GN  + L   
Sbjct: 513 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 572

Query: 536 NEMIVLDVE 540
           +EM  LD+E
Sbjct: 573 DEMKELDIE 574

[Close]
BLAST of CmoCh04G023960 vs. ExPASy Swiss-Prot
Match: Q9LN69 (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana OX=3702 GN=At1g19290 PE=3 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 1.3e-41
Identity = 126/509 (24.75%), Postives = 243/509 (47.74%), Query Frame = 0 

Query: 65  TLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKARLVID 124
           +L+ +D L+  +L + +  ++ +  L  F+ ++K++ F   +++Y  M+HIL +AR    
Sbjct: 65  SLDFSDELLNSILRRLR--LNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQ 124

Query: 125 ARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFALNMSA 184
            ++ L  ++  N      F +   L+  ++    SP VFD++++  A+  L+  AL++  
Sbjct: 125 TKSYLCELVALNHS---GFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFD 184

Query: 185 HLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSLCKEG 244
           ++   G   SL+S N+LL  + +  EN     +Y+QMI   V P+V T  I++N+ C+ G
Sbjct: 185 NMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSG 244

Query: 245 KLQE------------------------------ISDM-----LSRIHGSR-CSASLIVN 304
            + +                              I D+     + R+   R  S +++  
Sbjct: 245 NVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTY 304

Query: 305 GCLIYRILEEGRVEDGVMLLKRMLQKNMILDDIAYSLILYAKLKIGNIKSAQEVFDEMSK 364
             LI    ++G +E+   + + + +K ++ D   Y +++    + G I+ A  V D M +
Sbjct: 305 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 364

Query: 365 RGFQANSFIYTLFIGAHCRGGRIEEAHCLMEEMENMGLKPYPETFNLLIEG-CRDS--EE 424
            G + N+ I    I  +C+ G++ EA  +   M +  LKP   T+N L++G CR    +E
Sbjct: 365 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 424

Query: 425 SLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTTLLDKGFLPDETTYINLII 484
           +L++C++M ++  VP+  ++N+ +      G       +   +L +G   DE +   L+ 
Sbjct: 425 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 484

Query: 485 GYGKIGETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYLKIMKDRSIQP 533
              K+G+  E +KL+  + AR L         +I   C+  K+ EA++ L  +     +P
Sbjct: 485 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 544

[Close]
BLAST of CmoCh04G023960 vs. ExPASy TrEMBL
Match: A0A6J1HAX5 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111461713 PE=4 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 1.1e-299
Identity = 533/534 (99.81%), Postives = 534/534 (100.00%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT
Sbjct: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL
Sbjct: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
           NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL
Sbjct: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE
Sbjct: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360

Query: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420
           MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK
Sbjct: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420

Query: 421 ANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG 480
           ANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG
Sbjct: 421 ANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG 480

Query: 481 SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
           SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEM+
Sbjct: 481 SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMM 534

[Close]
BLAST of CmoCh04G023960 vs. ExPASy TrEMBL
Match: A0A6J1JRQ4 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111487740 PE=4 SV=1)

HSP 1 Score: 1000.0 bits (2584), Expect = 4.2e-288
Identity = 515/535 (96.26%), Postives = 522/535 (97.57%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MAFLR+KLSTFILSSSKISFCSSIRKL SI AA ELINNDA+VNSICDSFTRRESWDTLT
Sbjct: 1   MAFLRRKLSTFILSSSKISFCSSIRKLNSITAAGELINNDAVVNSICDSFTRRESWDTLT 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKFETLELNDSLVQKVLLKFQQLVD+KRALGFFHWSAKRKNFNHG QSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDSKRALGFFHWSAKRKNFNHGVQSYGIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LV DARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL
Sbjct: 121 LVNDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
           NM AHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYP+VITVRIMINSL
Sbjct: 181 NMCAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPDVITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLI+YAKLKIGNIK AQEVFDEMSKRGFQANSFIYTLFIGAHCR GRIEEAHCLMEE
Sbjct: 301 IAYSLIVYAKLKIGNIKCAQEVFDEMSKRGFQANSFIYTLFIGAHCRDGRIEEAHCLMEE 360

Query: 361 MENMGLKPYPETFNLLI-EGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVK 420
           MENMGLKPYPETFNLLI EGC DSEESLR+CEKMLERGFVPSCSSFNVAIAKICEEGDVK
Sbjct: 361 MENMGLKPYPETFNLLIEEGCGDSEESLRLCEKMLERGFVPSCSSFNVAIAKICEEGDVK 420

Query: 421 KANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALI 480
           KANEMLT LLDKGFLPDETTY NLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALI
Sbjct: 421 KANEMLTILLDKGFLPDETTYTNLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALI 480

Query: 481 GSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
           GSFCQSGKLEEAEKY KIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEM+
Sbjct: 481 GSFCQSGKLEEAEKYFKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMM 535

[Close]
BLAST of CmoCh04G023960 vs. ExPASy TrEMBL
Match: A0A5D3DTQ8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003260 PE=4 SV=1)

HSP 1 Score: 881.3 bits (2276), Expect = 2.2e-252
Identity = 450/537 (83.80%), Postives = 486/537 (90.50%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MA LRQKLS  +LSSSKIS C SIRKL S   AD+LIN+DA VNSIC+SFTRR+SWD L+
Sbjct: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKF+ LELND LVQKVLLKFQQ VDAK ALGFFHWSAKRKNFNHG QSYGIMIHILVKAR
Sbjct: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LV+DARALL+SILKKNEG+SF++S+VDSLLD+Y+VT SSPFVFDLL+QTCAKLRLIDFAL
Sbjct: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
              +HLEERGFSLSLISFNTL+HV+EKSDENRKVWKIYEQMI KRVYPN ITVRIMINSL
Sbjct: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQE SDML+RIHGSRCSASLIVN CLIYRILEEGRVEDGVMLLKRMLQKNM+LDD
Sbjct: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLI+YAK+K G+I S  EVF+EMSKRGFQANSFIYTL IG HCRGG +EEAHCLM+E
Sbjct: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360

Query: 361 MENMGLKPYPETFNLLIEGCR---DSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGD 420
           MENMGLKPY ETFNLLIEGC     SEE LRMCEKMLERGF+PSCS FNVAIAKICEEGD
Sbjct: 361 MENMGLKPYSETFNLLIEGCAISGHSEEILRMCEKMLERGFLPSCSVFNVAIAKICEEGD 420

Query: 421 VKKANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFA 480
           VKKANE+LT LLDKGFLPDETTY NLIIGY K GE  EILKLYYEM+ARLLSPG+SVFFA
Sbjct: 421 VKKANELLTILLDKGFLPDETTYTNLIIGYRKSGEILEILKLYYEMEARLLSPGISVFFA 480

Query: 481 LIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
           LIGS CQSG+LEEAEKYLKI+KD S+ PS+SIYQ L LFYLKKGNRAKALE YNEM+
Sbjct: 481 LIGSLCQSGRLEEAEKYLKIVKDSSLTPSLSIYQALILFYLKKGNRAKALELYNEMM 537

[Close]
BLAST of CmoCh04G023960 vs. ExPASy TrEMBL
Match: A0A1S3CCN8 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499327 PE=4 SV=1)

HSP 1 Score: 881.3 bits (2276), Expect = 2.2e-252
Identity = 450/537 (83.80%), Postives = 486/537 (90.50%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MA LRQKLS  +LSSSKIS C SIRKL S   AD+LIN+DA VNSIC+SFTRR+SWD L+
Sbjct: 1   MALLRQKLSPIVLSSSKISLCLSIRKLISTPVADDLINDDATVNSICESFTRRQSWDALS 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKF+ LELND LVQKVLLKFQQ VDAK ALGFFHWSAKRKNFNHG QSYGIMIHILVKAR
Sbjct: 61  RKFQFLELNDLLVQKVLLKFQQPVDAKLALGFFHWSAKRKNFNHGSQSYGIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LV+DARALL+SILKKNEG+SF++S+VDSLLD+Y+VT SSPFVFDLL+QTCAKLRLIDFAL
Sbjct: 121 LVLDARALLQSILKKNEGNSFDYSVVDSLLDSYKVTGSSPFVFDLLVQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
              +HLEERGFSLSLISFNTL+HV+EKSDENRKVWKIYEQMI KRVYPN ITVRIMINSL
Sbjct: 181 CFCSHLEERGFSLSLISFNTLIHVLEKSDENRKVWKIYEQMIGKRVYPNAITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQE SDML+RIHGSRCSASLIVN CLIYRILEEGRVEDGVMLLKRMLQKNM+LDD
Sbjct: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLI+YAK+K G+I S  EVF+EMSKRGFQANSFIYTL IG HCRGG +EEAHCLM+E
Sbjct: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQE 360

Query: 361 MENMGLKPYPETFNLLIEGCR---DSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGD 420
           MENMGLKPY ETFNLLIEGC     SEE LRMCEKMLERGF+PSCS FNVAIAKICEEGD
Sbjct: 361 MENMGLKPYSETFNLLIEGCAISGHSEEILRMCEKMLERGFLPSCSVFNVAIAKICEEGD 420

Query: 421 VKKANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFA 480
           VKKANE+LT LLDKGFLPDETTY NLIIGY K GE  EILKLYYEM+ARLLSPG+SVFFA
Sbjct: 421 VKKANELLTILLDKGFLPDETTYTNLIIGYRKSGEILEILKLYYEMEARLLSPGISVFFA 480

Query: 481 LIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
           LIGS CQSG+LEEAEKYLKI+KD S+ PS+SIYQ L LFYLKKGNRAKALE YNEM+
Sbjct: 481 LIGSLCQSGRLEEAEKYLKIVKDSSLTPSLSIYQALILFYLKKGNRAKALELYNEMM 537

[Close]
BLAST of CmoCh04G023960 vs. ExPASy TrEMBL
Match: A0A0A0KRP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G423870 PE=4 SV=1)

HSP 1 Score: 870.2 bits (2247), Expect = 5.0e-249
Identity = 446/537 (83.05%), Postives = 484/537 (90.13%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MA LRQKLS  +L SSKIS C S+R L SI  AD+LIN+DA VNSICDS TRR+SWDTL+
Sbjct: 1   MALLRQKLSPIVL-SSKISLCLSMRNLISIPVADKLINDDATVNSICDSLTRRQSWDTLS 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKF+ LELND LVQKVLLKFQQ VDAKRALGFFHWSAKRKNFNHG QS+GIMIHILVKAR
Sbjct: 61  RKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKRKNFNHGPQSFGIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LV+DARALLESILKKNEG+SF++S+VDSL+D+YEVT SSPFVFDLL+QTCAKLRLIDFAL
Sbjct: 121 LVLDARALLESILKKNEGNSFDYSVVDSLMDSYEVTGSSPFVFDLLVQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
            + +HLEERGFSLSLISFNTL+HVVEKSDEN KVWKIYEQMIRKRVYPN ITVRIMINSL
Sbjct: 181 CVCSHLEERGFSLSLISFNTLIHVVEKSDENLKVWKIYEQMIRKRVYPNAITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQE SDML+RIHGSRCSASLIVN CLIYRILEEGRVEDG+ LLKRMLQKNM+LDD
Sbjct: 241 CKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLI+YAK+K G+I S  EVF+EMS+RGFQANSFIYTLFIG HCRGG++EEAHCLM+E
Sbjct: 301 IAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQE 360

Query: 361 MENMGLKPYPETFNLLIEGCR---DSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGD 420
           MENMGLKPYPETFNLLIEGC     SEE L MCEKMLERGF+PSCS FNVAI KICE+GD
Sbjct: 361 MENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIDKICEKGD 420

Query: 421 VKKANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFA 480
           VKKAN +LT LLDKGFLPDETTY NLIIGY K GE QEILKLYYEM ARLLSPGVSVFFA
Sbjct: 421 VKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEMGARLLSPGVSVFFA 480

Query: 481 LIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
           LIGS CQSG+LEEAEKYLKI+KD S+ P +SIYQ L L YLKKGNRAKALE YNEM+
Sbjct: 481 LIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILLYLKKGNRAKALELYNEMM 536

[Close]
BLAST of CmoCh04G023960 vs. NCBI nr
Match: XP_022961108.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1038.5 bits (2684), Expect = 2.2e-299
Identity = 533/534 (99.81%), Postives = 534/534 (100.00%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT
Sbjct: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL
Sbjct: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
           NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL
Sbjct: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE
Sbjct: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360

Query: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420
           MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK
Sbjct: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420

Query: 421 ANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG 480
           ANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG
Sbjct: 421 ANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG 480

Query: 481 SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
           SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEM+
Sbjct: 481 SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMM 534

[Close]
BLAST of CmoCh04G023960 vs. NCBI nr
Match: KAG7032723.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1033.1 bits (2670), Expect = 9.1e-298
Identity = 531/534 (99.44%), Postives = 532/534 (99.63%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT
Sbjct: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSY IMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYCIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL
Sbjct: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
           NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL
Sbjct: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE
Sbjct: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360

Query: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420
           MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK
Sbjct: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420

Query: 421 ANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG 480
           ANEMLTTLLDKGFLPDETTY NLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG
Sbjct: 421 ANEMLTTLLDKGFLPDETTYTNLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG 480

Query: 481 SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
           SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEM+
Sbjct: 481 SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMM 534

[Close]
BLAST of CmoCh04G023960 vs. NCBI nr
Match: KAG6602029.1 (DELLA protein GAI, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1023.8 bits (2646), Expect = 5.6e-295
Identity = 539/575 (93.74%), Postives = 540/575 (93.91%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MAFLRQKLSTFILSSSKISFCSSIRKL SIAAADELINNDAIVNSICDSFTRRESWDTLT
Sbjct: 1   MAFLRQKLSTFILSSSKISFCSSIRKLNSIAAADELINNDAIVNSICDSFTRRESWDTLT 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL
Sbjct: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
           NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL
Sbjct: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE
Sbjct: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360

Query: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420
           MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK
Sbjct: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420

Query: 421 ANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG 480
           ANEMLTTLLDKGFLPDETTYINLIIGYGKI ETQEILKLYYEMDARLLSPGVSVFFALIG
Sbjct: 421 ANEMLTTLLDKGFLPDETTYINLIIGYGKIVETQEILKLYYEMDARLLSPGVSVFFALIG 480

Query: 481 SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMIVLDVER 540
           SFCQSGKLEEAEKYLKIMKDR                                 VLDVER
Sbjct: 481 SFCQSGKLEEAEKYLKIMKDR---------------------------------VLDVER 540

Query: 541 SLLIRKSTLCLPTLTHSKVIHVLLLRKKSELLLEV 576
           SLLIRKSTLCLPTLTHSKVIHVLLLRKKSELLLE+
Sbjct: 541 SLLIRKSTLCLPTLTHSKVIHVLLLRKKSELLLEM 542

[Close]
BLAST of CmoCh04G023960 vs. NCBI nr
Match: XP_023550461.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1023.8 bits (2646), Expect = 5.6e-295
Identity = 525/534 (98.31%), Postives = 528/534 (98.88%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MAFLRQKLSTFILSSSKISFCSSIRKL SI AADELINNDAIVNSICDSFTRRESWDTLT
Sbjct: 1   MAFLRQKLSTFILSSSKISFCSSIRKLNSITAADELINNDAIVNSICDSFTRRESWDTLT 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL
Sbjct: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
           NM AHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL
Sbjct: 181 NMCAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLI+YAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCR GRIEEAHCLMEE
Sbjct: 301 IAYSLIVYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRDGRIEEAHCLMEE 360

Query: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420
           MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK
Sbjct: 361 MENMGLKPYPETFNLLIEGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKK 420

Query: 421 ANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG 480
           ANEMLT LLDKGFLPDETTY NLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG
Sbjct: 421 ANEMLTILLDKGFLPDETTYTNLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIG 480

Query: 481 SFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
           SFCQSG+LEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEM+
Sbjct: 481 SFCQSGRLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMM 534

[Close]
BLAST of CmoCh04G023960 vs. NCBI nr
Match: XP_022991025.1 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1000.0 bits (2584), Expect = 8.6e-288
Identity = 515/535 (96.26%), Postives = 522/535 (97.57%), Query Frame = 0 

Query: 1   MAFLRQKLSTFILSSSKISFCSSIRKLTSIAAADELINNDAIVNSICDSFTRRESWDTLT 60
           MAFLR+KLSTFILSSSKISFCSSIRKL SI AA ELINNDA+VNSICDSFTRRESWDTLT
Sbjct: 1   MAFLRRKLSTFILSSSKISFCSSIRKLNSITAAGELINNDAVVNSICDSFTRRESWDTLT 60

Query: 61  RKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKAR 120
           RKFETLELNDSLVQKVLLKFQQLVD+KRALGFFHWSAKRKNFNHG QSYGIMIHILVKAR
Sbjct: 61  RKFETLELNDSLVQKVLLKFQQLVDSKRALGFFHWSAKRKNFNHGVQSYGIMIHILVKAR 120

Query: 121 LVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180
           LV DARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL
Sbjct: 121 LVNDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFAL 180

Query: 181 NMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSL 240
           NM AHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYP+VITVRIMINSL
Sbjct: 181 NMCAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPDVITVRIMINSL 240

Query: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300
           CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD
Sbjct: 241 CKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDD 300

Query: 301 IAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEE 360
           IAYSLI+YAKLKIGNIK AQEVFDEMSKRGFQANSFIYTLFIGAHCR GRIEEAHCLMEE
Sbjct: 301 IAYSLIVYAKLKIGNIKCAQEVFDEMSKRGFQANSFIYTLFIGAHCRDGRIEEAHCLMEE 360

Query: 361 MENMGLKPYPETFNLLI-EGCRDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVK 420
           MENMGLKPYPETFNLLI EGC DSEESLR+CEKMLERGFVPSCSSFNVAIAKICEEGDVK
Sbjct: 361 MENMGLKPYPETFNLLIEEGCGDSEESLRLCEKMLERGFVPSCSSFNVAIAKICEEGDVK 420

Query: 421 KANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALI 480
           KANEMLT LLDKGFLPDETTY NLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALI
Sbjct: 421 KANEMLTILLDKGFLPDETTYTNLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALI 480

Query: 481 GSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
           GSFCQSGKLEEAEKY KIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEM+
Sbjct: 481 GSFCQSGKLEEAEKYFKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMM 535

[Close]
BLAST of CmoCh04G023960 vs. TAIR 10
Match: AT1G66345.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 481.5 bits (1238), Expect = 9.6e-136
Identity = 244/496 (49.19%), Postives = 343/496 (69.15%), Query Frame = 0 

Query: 42  IVNSICDSFTRRESWDTLTRKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKN 101
           +++ I  S    ++W+TL+ KF +++L+DSL++ +LL+F+    AK+AL FFHWS+  +N
Sbjct: 49  LIDYISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRN 108

Query: 102 FNHGFQSYGIMIHILVKARLVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPF 161
             HG +SY + IHILVKARL+IDARAL+ES L  +   S    +VDSLLDTYE++ S+P 
Sbjct: 109 LRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDS---DLVDSLLDTYEISSSTPL 168

Query: 162 VFDLLIQTCAKLRLIDFALNMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQM 221
           VFDLL+Q  AK+R ++   ++   L + GF+LS+I+ NTL+H   KS  +  VW+IYE  
Sbjct: 169 VFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECA 228

Query: 222 IRKRVYPNVITVRIMINSLCKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRV 281
           I KR+YPN IT+RIMI  LCKEG+L+E+ D+L RI G RC  S+IVN  L++R+LEE R+
Sbjct: 229 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 288

Query: 282 EDGVMLLKRMLQKNMILDDIAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLF 341
           E+ + LLKR+L KNM++D I YS+++YAK K G++ SA++VFDEM +RGF ANSF+YT+F
Sbjct: 289 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVF 348

Query: 342 IGAHCRGGRIEEAHCLMEEMENMGLKPYPETFNLLIEGCRD---SEESLRMCEKMLERGF 401
           +   C  G ++EA  L+ EME  G+ PY ETFN LI G       E+ L  CE M+ RG 
Sbjct: 349 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGL 408

Query: 402 VPSCSSFNVAIAKICEEGDVKKANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILK 461
           +PSCS+FN  +  + +  +V +ANE+LT  +DKGF+PDE TY +LI G+ +  +  + LK
Sbjct: 409 MPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALK 468

Query: 462 LYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYL 521
           L+YEM+ R +SPG  VF +LI   C  GK+E  EKYLKIMK R I+P+  IY  L   + 
Sbjct: 469 LFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQ 528

Query: 522 KKGNRAKALEHYNEMI 535
           K G++  A   YNEMI
Sbjct: 529 KIGDKTNADRVYNEMI 541

[Close]
BLAST of CmoCh04G023960 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 9.8e-48
Identity = 128/459 (27.89%), Postives = 224/459 (48.80%), Query Frame = 0 

Query: 82  QLVDAKRALGFFHWSAKRKNF--NHGFQSYGIMIHILVKARLVIDARALLESILKKNEGS 141
           +LV  K AL F  W  K+     +H  Q   I  HILV+AR+   AR +L+ +   +  S
Sbjct: 86  RLVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKS 145

Query: 142 SFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFALNMSAHLEERGFSLSLISFN 201
           SF F    +L+ TY + +S+P V+D+LI+   +  +I  +L +   +   GF+ S+ + N
Sbjct: 146 SFVFG---ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCN 205

Query: 202 TLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSLCKEGKLQEISDMLSRIHGS 261
            +L  V KS E+  VW   ++M+++++ P+V T  I+IN LC EG  ++ S ++ ++  S
Sbjct: 206 AILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 265

Query: 262 RCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDDIAYSLILYAKLKIGNIKSA 321
             + +++    +++   ++GR +  + LL  M  K +  D   Y+++++   +   I   
Sbjct: 266 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 325

Query: 322 QEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEEMENMGLKPYPETFNLLIEG 381
             +  +M KR    N   Y   I      G++  A  L+ EM + GL P   TFN LI+G
Sbjct: 326 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 385

Query: 382 C---RDSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTTLLDKGFLPD 441
                + +E+L+M   M  +G  PS  S+ V +  +C+  +   A      +   G    
Sbjct: 386 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 445

Query: 442 ETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYLK 501
             TY  +I G  K G   E + L  EM    + P +  + ALI  FC+ G+ + A++ + 
Sbjct: 446 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVC 505

Query: 502 IMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMIV 536
            +    + P+  IY TL     + G   +A+  Y  MI+
Sbjct: 506 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541

[Close]
BLAST of CmoCh04G023960 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 4.1e-46
Identity = 119/463 (25.70%), Postives = 227/463 (49.03%), Query Frame = 0 

Query: 76  VLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKARLVIDARALLESILKK 135
           +LLK Q   D    L F +W+   + F    +   I +HIL K +L   A+ L E +  K
Sbjct: 54  LLLKSQN--DQALILKFLNWANPHQFFT--LRCKCITLHILTKFKLYKTAQILAEDVAAK 113

Query: 136 NEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFALNMSAHLEERGFSLSL 195
                +   +  SL +TY++  S+  VFDL++++ ++L LID AL++    +  GF   +
Sbjct: 114 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGV 173

Query: 196 ISFNTLLHVVEKSDENRK-VWKIYEQMIRKRVYPNVITVRIMINSLCKEGKLQEISDMLS 255
           +S+N +L    +S  N      ++++M+  +V PNV T  I+I   C  G +     +  
Sbjct: 174 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 233

Query: 256 RIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQKNMILDDIAYSLILYAKLKIG 315
           ++    C  +++    LI    +  +++DG  LL+ M  K +  + I+Y++++    + G
Sbjct: 234 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 293

Query: 316 NIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEEAHCLMEEMENMGLKPYPETFN 375
            +K    V  EM++RG+  +   Y   I  +C+ G   +A  +  EM   GL P   T+ 
Sbjct: 294 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 353

Query: 376 LLIEG-CR--DSEESLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTTLLDK 435
            LI   C+  +   ++   ++M  RG  P+  ++   +    ++G + +A  +L  + D 
Sbjct: 354 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 413

Query: 436 GFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEA 495
           GF P   TY  LI G+   G+ ++ + +  +M  + LSP V  +  ++  FC+S  ++EA
Sbjct: 414 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 473

Query: 496 EKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHYNEMI 535
            +  + M ++ I+P    Y +L   + ++    +A + Y EM+
Sbjct: 474 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512

[Close]
BLAST of CmoCh04G023960 vs. TAIR 10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-43
Identity = 134/489 (27.40%), Postives = 222/489 (45.40%), Query Frame = 0 

Query: 56  WDT--LTRKFETLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMI 115
           WD   L + F+ L L    V +VL++ ++  D K A  FF WS  R  F H  +SY I+ 
Sbjct: 93  WDDPGLEKLFD-LTLAPIWVPRVLVELKE--DPKLAFKFFKWSMTRNGFKHSVESYCIVA 152

Query: 116 HILVKARLVIDARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKL 175
           HIL  AR+  DA     S+LK+   S  +  + D L  T  V      VFD L      L
Sbjct: 153 HILFCARMYYDA----NSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDL 212

Query: 176 RLIDFALNMSAHLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITV 235
            +++ A+   + ++         S N LLH   K  +   V + ++ MI     P V T 
Sbjct: 213 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 272

Query: 236 RIMINSLCKEGKLQEISDMLSRIHGSRCSASLIVNGCLIYRILEEGRVEDGVMLLKRMLQ 295
            IMI+ +CKEG ++    +   +         +    +I    + GR++D V   + M  
Sbjct: 273 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 332

Query: 296 KNMILDDIAYSLILYAKLKIGNIKSAQEVFDEMSKRGFQANSFIYTLFIGAHCRGGRIEE 355
                D I Y+ ++    K G +    E + EM   G + N   Y+  + A C+ G +++
Sbjct: 333 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 392

Query: 356 AHCLMEEMENMGLKPYPETFNLLIE-GCR--DSEESLRMCEKMLERGFVPSCSSFNVAIA 415
           A     +M  +GL P   T+  LI+  C+  +  ++ R+  +ML+ G   +  ++   I 
Sbjct: 393 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 452

Query: 416 KICEEGDVKKANEMLTTLLDKGFLPDETTYINLIIGYGKIGETQEILKLYYEMDARLLSP 475
            +C+   +K+A E+   +   G +P+  +Y  LI G+ K       L+L  E+  R + P
Sbjct: 453 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 512

Query: 476 GVSVFFALIGSFCQSGKLEEAEKYLKIMKDRSIQPSVSIYQTLSLFYLKKGNRAKALEHY 535
            + ++   I   C   K+E A+  +  MK+  I+ +  IY TL   Y K GN  + L   
Sbjct: 513 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 572

Query: 536 NEMIVLDVE 540
           +EM  LD+E
Sbjct: 573 DEMKELDIE 574

[Close]
BLAST of CmoCh04G023960 vs. TAIR 10
Match: AT1G19290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 9.5e-43
Identity = 126/509 (24.75%), Postives = 243/509 (47.74%), Query Frame = 0 

Query: 65  TLELNDSLVQKVLLKFQQLVDAKRALGFFHWSAKRKNFNHGFQSYGIMIHILVKARLVID 124
           +L+ +D L+  +L + +  ++ +  L  F+ ++K++ F   +++Y  M+HIL +AR    
Sbjct: 65  SLDFSDELLNSILRRLR--LNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQ 124

Query: 125 ARALLESILKKNEGSSFNFSIVDSLLDTYEVTDSSPFVFDLLIQTCAKLRLIDFALNMSA 184
            ++ L  ++  N      F +   L+  ++    SP VFD++++  A+  L+  AL++  
Sbjct: 125 TKSYLCELVALNHS---GFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFD 184

Query: 185 HLEERGFSLSLISFNTLLHVVEKSDENRKVWKIYEQMIRKRVYPNVITVRIMINSLCKEG 244
           ++   G   SL+S N+LL  + +  EN     +Y+QMI   V P+V T  I++N+ C+ G
Sbjct: 185 NMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSG 244

Query: 245 KLQE------------------------------ISDM-----LSRIHGSR-CSASLIVN 304
            + +                              I D+     + R+   R  S +++  
Sbjct: 245 NVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTY 304

Query: 305 GCLIYRILEEGRVEDGVMLLKRMLQKNMILDDIAYSLILYAKLKIGNIKSAQEVFDEMSK 364
             LI    ++G +E+   + + + +K ++ D   Y +++    + G I+ A  V D M +
Sbjct: 305 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 364

Query: 365 RGFQANSFIYTLFIGAHCRGGRIEEAHCLMEEMENMGLKPYPETFNLLIEG-CRDS--EE 424
            G + N+ I    I  +C+ G++ EA  +   M +  LKP   T+N L++G CR    +E
Sbjct: 365 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 424

Query: 425 SLRMCEKMLERGFVPSCSSFNVAIAKICEEGDVKKANEMLTTLLDKGFLPDETTYINLII 484
           +L++C++M ++  VP+  ++N+ +      G       +   +L +G   DE +   L+ 
Sbjct: 425 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 484

Query: 485 GYGKIGETQEILKLYYEMDARLLSPGVSVFFALIGSFCQSGKLEEAEKYLKIMKDRSIQP 533
              K+G+  E +KL+  + AR L         +I   C+  K+ EA++ L  +     +P
Sbjct: 485 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 544

The following BLAST results are available for this feature:
BLAST of CmoCh04G023960 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3ECH51.3e-13449.19Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidop... [more]
Q9LVQ51.4e-4627.89Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
Q9FIX35.8e-4525.70Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
P0C8941.6e-4227.40Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... [more]
Q9LN691.3e-4124.75Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis th... [more]
BLAST of CmoCh04G023960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HAX51.1e-29999.81pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbit... [more]
A0A6J1JRQ44.2e-28896.26pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucurbit... [more]
A0A5D3DTQ82.2e-25283.80Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CCN82.2e-25283.80pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Cucumis ... [more]
A0A0A0KRP75.0e-24983.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G423870 PE=4 SV=1[more]
BLAST of CmoCh04G023960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961108.12.2e-29999.81pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita ... [more]
KAG7032723.19.1e-29899.44Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6602029.15.6e-29593.74DELLA protein GAI, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023550461.15.6e-29598.31pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita ... [more]
XP_022991025.18.6e-28896.26pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucurbita ... [more]
BLAST of CmoCh04G023960 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G66345.19.6e-13649.19Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G55840.19.8e-4827.89Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G39710.14.1e-4625.70Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G02150.11.1e-4327.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G19290.19.5e-4324.75Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 70..265
e-value: 1.8E-19
score: 72.3
coord: 266..383
e-value: 1.3E-22
score: 82.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 384..548
e-value: 6.4E-28
score: 100.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 477..506
e-value: 5.1E-5
score: 21.2
coord: 337..368
e-value: 1.7E-6
score: 25.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 108..136
e-value: 0.25
score: 11.7
coord: 477..502
e-value: 1.5E-4
score: 21.8
coord: 439..464
e-value: 0.0098
score: 16.1
coord: 302..331
e-value: 0.042
score: 14.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 196..242
e-value: 2.2E-10
score: 40.6
coord: 334..380
e-value: 2.8E-9
score: 37.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 401..435
score: 8.856788
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 436..470
score: 9.382931
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..368
score: 12.112294
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 194..228
score: 8.834866
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 299..333
score: 9.744654
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 471..505
score: 10.490022
NoneNo IPR availablePANTHERPTHR45613:SF248PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIALcoord: 4..535
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 4..535
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 414..539
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 507..540
score: 8.5849

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G023960.1CmoCh04G023960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
molecular_function GO:0005515 protein binding