CmoCh04G023880 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G023880
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Voltage-dependent L-type calcium channel subunit
Location	Cmo_Chr04: 17793347 .. 17797026 (-)
RNA-Seq Expression	CmoCh04G023880
Synteny	CmoCh04G023880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGAAGTACGATTCCGATGATCGGAATGGCACCGTGCCGGTTGACGAACAAGATAGAACCAGTCACAAGTCCAAAGGAGTGTATAATATGGATCGGACAGTTTATGAAACCCTCCGCCGTCTGATCGCTGAGGTTTTCTCCCCCGATAAAGCTAAGGGTTCTTCATTGTTCCAGCGCGTTAAGGTCTCCATCACTGAGAATGGCCCTGCCGTTGAAAAGGCCTGCAGAAACATTGGTCGCGATGTTCTTTGCTGGACTCGCAGGGGCAGTCCTCTTAGAGCACTCCTTGTTATCTCCGTGAGTATTACTGATAATTCCAAAACTGGTGGTTGTCTGGACTTGTTTATTGTGTTTGAAATGCTTTCTGTTCAGTACTTAATGGTTAGATGGACTGTTGGAGATTTTGATTTTATCGCTTAAATGGTATTATCTCTGTTGTTTTTTGGTTCTTGTTTAATGGCAACGATTGATCTGGGCAGGATTTGTTGTTAGTAGGAATTTTTTTTCCTTAATAATGTATATTGTTTAACAATTTGATCAATGGCAAGTGCGGTGAGAGCTCGAGTGGTGGTGTTTTTGACGATCGGAGAAAATAATTTGCTGAGGTAATTTCCTCTTGTTTTGACCCATTTGCCAATGTTTTCAGCCTTCTTTCTTTTTGTAAACTCATTTTCAGCCACCATCTTCTGCTGTTTGGTCTTGTGGAGGGAGTTGATTTCTTCTTCCATGGCCATACGTTGCATTGGACCTGTAAGACTGGAGTGCTACTTAGGTGTTTCACTAATTCCCAATTGTCTTTGCCCTTGTTAATGGATGAGCAACCTTCTGAAGATGTAGCCCATTTTTCTATCCATTCCATAAACCATGGAGGGTATTGACTATATGAATTGAGTGAAGATTCTTGACTTCGTTCAAGTATTTGCTATCCTTTAGACTTTTTCTTTTCTTGTTTCATCTTGAATAGACAATATGTTCTTTTTGATGTCTAGTTTCTTGAGTTTTATTGTTTGGTTTCCCTGTTGTTGTTAAGACCTATCAACTATGTAAAATTCGAGCGGTTTTGTTTGAGATTGTTTTGGGGCCAGGCTCCTTTGCGTACAGCTCTTAGGAGCTTTGATTTCGATACTAGTGCTTGGTTCCAAAGATGGTGACAGGAAAAATGGAATTTTTTATTCATGAGAGAATAATATATTTAACCCTTTTAGTTTAGATGCATAGCCTAGAAGGATATACCTAATAGCCCAAGGGTCAAGTTTACTTCTTCTAGGAGAGTGATTATTGAAAAGATTTAACCCTTTTGTTTTAGGGGTACTCTCATGGATGGAGAAGATACGTGAAAGATTTTAAAATTGATAGATTCCGTATGGAGTTCTCTAAAGTTCTTTGTGATTTTGACTCATTTTTTATTTGTGCCAATTGTAAGAGTTGTTTGTACCCTTTTGGCATTGTTATGGGTCGTTGATATCTCACCTCCCCATCTCTGAGGATTCTGTTAATGAAAAATTTTCTATCTAAAAAAAATTATAAATGATGAGAAATTGATAGACATTTTACTAACAATGGAAAGAAAAAGTTCTGGCTCTTGAGGTTCGACTCAAGGAGGGTGCAACTGTTGGAAAGATATATATAACAAAAGTCGAGGGTACCAAATAGGTTTGATACTGATGAACGATGTGTACTGTAGCGTAGGTCCTCTGACTGCTCTTATCTGTTTTCTATCTGTTGCAAGATTTTTGTTGTAATAGTCCTCTCTATCTTTCAGACACAGACAAACTGAAGTCTTTTTATGTTCTCACCAGCTCCCTTCTTATTAGTAGTTACTTACATTTGGAATTGCTGCAGGTTGGGACAATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTTTCAACGCCGTTGTTATTTCTCTTCTTGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCACTTTTCTTTGCTTGCATAACGGCTGTTTACATCGGAGCATTAACAGTTGCTTTGTTTGTTATATCCACTGCAACAATCTCAGCAATTGTGGCAGTGGTGATTGCCGCAGGTAGCAATAATATCTACTCTTATCTAAGCCACGTTTCTCTAAAACCTCTTAACCTGTTGATATGAATGTGTACATGTTGGTTTGACATGGTTCGGTCTCCTCTTAAGGAATAACATGTGCATCAGTTTGCAGCTTTCTAGCTATATGCTTCTGCTTTCTCTTTCGTTGGGGTTCTCTACCACGATTTGAATTGTTTTCTGAATCATTTGTGTGCATTTAGCTTATGGGTATGGACGAAAATGTTAGGAACCACGAATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCCCTCGTGGCTTTTCTTTTGGTTTTTCCAAACGGCCTCATACCAATGGAGATAGTATTCATTATTTATAAACTCATCGATCAACCCTTTAATTAGTCGATGTGGGACTCTTCTCCCAACGATTCTCAACAATCCTCCCCTCGAACAAAGTACACCATAGAGTCTACCCTGAGGCCTATGAAGCCCTCAAACAGCCTCCCTTTAATCGAGGCTCGACTCCTTCTCTGGAGCCCTGGAACAAAGTACACGTTTTGTTCGACACTTGAGTTACTTTTGTCTACACCTTCGAGGCTCACAACTTCTTTGTTAAACATTTGAAGATTCAATTAGTATGACTAAGTTAAGGACATGACTCTGATACTATGATAGGAACCACGAATCGCCACAATGGTATGATATTGTCCATTTTGAGCATAAGCTCTGATGGCTTTTCTTTTGGTTTCTCCAAAAGGCCTCATACCAATAGAGATAGTATTCCTTATTTATAAACCCATGATCAACCCTTTAATTAGCCGATGTGAGACTCCTCTCTCAACAATTCTCAACAGGAAATGTTGTAAGCTACTGATTGAACTAGCGGATCGAGAGAAGTTTTGCTTCGCTTTCATTTAGACAAAGCCATATACTAGTCAATGACTTCCCATTGATTTTGTTTGTCTTCATGAGAGTAGACCTTGTGTCAATTGTGCACTATTGGAATTTCCGTACTTCAATTCTTTCTTTGCTCTAACATCTTGCATCTTCCAAATTCAGGTTGGATTGGATTCTTCTGTGTGGTATGGCTAGCAATGCGAAAAAGTTTTGGTATTGCTAAGCAGTCGATGAGCGCGGGCAGTTCAGCAATTTCAGCATTTTCTCATGCTAGACGTGCCCACAAAGATTAGGTATGTTTTTAGATGAGTTAAGTGAATGCTTTGAACTGGTGTATGTTATTGCTTCACACGTGTTTTCCCCTATTGAGAGTTACGTTTTGGAGGATCTGCTGCATATGTTGTGTTGACTTTGAAGTTGTTCTAGGTAGTGAAACCATAACATGTATTTGTAATGTAAATATTCTGTTAAATGTGTTGAGTCATACAATATAGTCCTACTATTTTATGGGTTCCTTTATTGGTGATGAAAGTATCTAGATTGAAGATAGAACTTCCCAGAACTGTCATAATCTAAGTAATATTTTGGCTTTAAGTTACTGCTATGTACTGTAATTGTGAAAATTTACAAGGATTTAAATTTGAAGTGTTCAATGAGGTGATGACTGATTGAATGAATTTGGATTTATGAAGTTCAAGGTTAGAAACAT

mRNA sequence

ATGGCGGAGAAGTACGATTCCGATGATCGGAATGGCACCGTGCCGGTTGACGAACAAGATAGAACCAGTCACAAGTCCAAAGGAGTGTATAATATGGATCGGACAGTTTATGAAACCCTCCGCCGTCTGATCGCTGAGGTTTTCTCCCCCGATAAAGCTAAGGGTTCTTCATTGTTCCAGCGCGTTAAGGTCTCCATCACTGAGAATGGCCCTGCCGTTGAAAAGGCCTGCAGAAACATTGGTCGCGATGTTCTTTGCTGGACTCGCAGGGGCAGTCCTCTTAGAGCACTCCTTGTTATCTCCGTGAGTATTACTGATAATTCCAAAACTGGTGGTTGTCTGGACTTGTTTATTGTGTTTGAAATGCTTTCTGTTCAGTACTTAATGGTTGGGACAATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTTTCAACGCCGTTGTTATTTCTCTTCTTGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCACTTTTCTTTGCTTGCATAACGGCTGTTTACATCGGAGCATTAACAGTTGCTTTGTTTGTTATATCCACTGCAACAATCTCAGCAATTGTGGCAGTGGTGATTGCCGCAGGTTGGATTGGATTCTTCTGTGTGGTATGGCTAGCAATGCGAAAAAGTTTTGGTATTGCTAAGCAGTCGATGAGCGCGGGCAGTTCAGCAATTTCAGCATTTTCTCATGCTAGACGTGCCCACAAAGATTAGGTATGTTTTTAGATGAGTTAAGTGAATGCTTTGAACTGGTGTATGTTATTGCTTCACACGTGTTTTCCCCTATTGAGAGTTACGTTTTGGAGGATCTGCTGCATATGTTGTGTTGACTTTGAAGTTGTTCTAGGTAGTGAAACCATAACATGTATTTGTAATGTAAATATTCTGTTAAATGTGTTGAGTCATACAATATAGTCCTACTATTTTATGGGTTCCTTTATTGGTGATGAAAGTATCTAGATTGAAGATAGAACTTCCCAGAACTGTCATAATCTAAGTAATATTTTGGCTTTAAGTTACTGCTATGTACTGTAATTGTGAAAATTTACAAGGATTTAAATTTGAAGTGTTCAATGAGGTGATGACTGATTGAATGAATTTGGATTTATGAAGTTCAAGGTTAGAAACAT

Coding sequence (CDS)

ATGGCGGAGAAGTACGATTCCGATGATCGGAATGGCACCGTGCCGGTTGACGAACAAGATAGAACCAGTCACAAGTCCAAAGGAGTGTATAATATGGATCGGACAGTTTATGAAACCCTCCGCCGTCTGATCGCTGAGGTTTTCTCCCCCGATAAAGCTAAGGGTTCTTCATTGTTCCAGCGCGTTAAGGTCTCCATCACTGAGAATGGCCCTGCCGTTGAAAAGGCCTGCAGAAACATTGGTCGCGATGTTCTTTGCTGGACTCGCAGGGGCAGTCCTCTTAGAGCACTCCTTGTTATCTCCGTGAGTATTACTGATAATTCCAAAACTGGTGGTTGTCTGGACTTGTTTATTGTGTTTGAAATGCTTTCTGTTCAGTACTTAATGGTTGGGACAATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTTTCAACGCCGTTGTTATTTCTCTTCTTGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCACTTTTCTTTGCTTGCATAACGGCTGTTTACATCGGAGCATTAACAGTTGCTTTGTTTGTTATATCCACTGCAACAATCTCAGCAATTGTGGCAGTGGTGATTGCCGCAGGTTGGATTGGATTCTTCTGTGTGGTATGGCTAGCAATGCGAAAAAGTTTTGGTATTGCTAAGCAGTCGATGAGCGCGGGCAGTTCAGCAATTTCAGCATTTTCTCATGCTAGACGTGCCCACAAAGATTAG

Protein sequence

MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

Homology

[Close]

BLAST of CmoCh04G023880 vs. ExPASy TrEMBL
Match: A0A6J1E7P4 (uncharacterized protein LOC111430635 OS=Cucurbita moschata OX=3662 GN=LOC111430635 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 9.5e-104
Identity = 223/251 (88.84%), Postives = 223/251 (88.84%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ
Sbjct: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVIS                   
Sbjct: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA
Sbjct: 121 ---------VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS
Sbjct: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 223

Query: 241 AFSHARRAHKD 252
           AFSHARRAHKD
Sbjct: 241 AFSHARRAHKD 223

[Close]

BLAST of CmoCh04G023880 vs. ExPASy TrEMBL
Match: A0A6J1JJZ4 (uncharacterized protein LOC111487608 OS=Cucurbita maxima OX=3661 GN=LOC111487608 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.2e-98
Identity = 214/251 (85.26%), Postives = 220/251 (87.65%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAEKYDSDDRNGTVPVDEQ+RTSHKSKG+++ D+TVYETLRRLIAEVFSPDKAKGSSLFQ
Sbjct: 1   MAEKYDSDDRNGTVPVDEQERTSHKSKGLHSEDQTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVSITENGPAVEKACRNIG DVLCWTRRGSPLRALLVIS                   
Sbjct: 61  RVKVSITENGPAVEKACRNIGCDVLCWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA
Sbjct: 121 ---------VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLA+RKSFGIAKQSMSAGSS IS
Sbjct: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIAKQSMSAGSSVIS 223

Query: 241 AFSHARRAHKD 252
           AFSHARRAHKD
Sbjct: 241 AFSHARRAHKD 223

[Close]

BLAST of CmoCh04G023880 vs. ExPASy TrEMBL
Match: A0A6J1CIE7 (uncharacterized protein LOC111011773 OS=Momordica charantia OX=3673 GN=LOC111011773 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.7e-81
Identity = 180/251 (71.71%), Postives = 202/251 (80.48%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           M E YDSDDRNG V V+E+D  S+ SKGV + D+TVYE LRRLIAE+F PD+ KG+SLF 
Sbjct: 1   MGEPYDSDDRNGAVTVEEEDGVSYSSKGVRSEDQTVYEPLRRLIAEIFFPDEFKGTSLFH 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVK+S+ ENGPAV +ACRN+GRDVL WTRRGSPLRALLVIS                   
Sbjct: 61  RVKLSVAENGPAVGQACRNVGRDVLRWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTIALLALTGLLIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA
Sbjct: 121 ---------VGTIALLALTGLLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           VYIGALTVA+FVISTAT SAIVAV++A GWIGFFCVVWLA+R+SFG AKQS+SA SSAIS
Sbjct: 181 VYIGALTVAVFVISTATFSAIVAVLVATGWIGFFCVVWLAVRRSFGFAKQSLSASSSAIS 223

Query: 241 AFSHARRAHKD 252
           AFS+ARRAHKD
Sbjct: 241 AFSYARRAHKD 223

[Close]

BLAST of CmoCh04G023880 vs. ExPASy TrEMBL
Match: A0A0A0KNC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G427940 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 3.3e-80
Identity = 179/251 (71.31%), Postives = 203/251 (80.88%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAE +DSDDRN TVPV+E+D +SH+SKGV   D+TVYE LRRLIAE+F PD+ KG SLF 
Sbjct: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKG-SLFH 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVS+T+NGPAV +ACRN GRDVL WTRRGSPLRALLVIS                   
Sbjct: 61  RVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTI LLA+TG LIFL FFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA
Sbjct: 121 ---------VGTIVLLAMTGSLIFLFFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           +Y+GAL VALFVISTATISAIVAVVIAAGWIGFFC+VWLA+RKSFG+AK+S+SA +SAIS
Sbjct: 181 IYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAIS 222

Query: 241 AFSHARRAHKD 252
           AFS+ARRAHKD
Sbjct: 241 AFSYARRAHKD 222

[Close]

BLAST of CmoCh04G023880 vs. ExPASy TrEMBL
Match: A0A5A7V6K3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00050 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 174/251 (69.32%), Postives = 199/251 (79.28%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAE +DSD RN TVPV+E+D +SH+SKG+   D+TVYE LRRLIAE+F PD+ KG SLF 
Sbjct: 1   MAEAHDSDARNTTVPVEEEDASSHQSKGLSIDDQTVYEPLRRLIAEIFFPDEIKG-SLFH 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVS+ +NGPAV +ACRN G DVL WTRRGSPLRALLVIS                   
Sbjct: 61  RVKVSVADNGPAVGQACRNFGHDVLSWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTI LLA+TG LIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA
Sbjct: 121 ---------VGTIVLLAMTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           +Y+GAL VALFVISTATISAIVAVVIAAGWIGFF +VWLA+ KSFG+AK+S+SA +SAIS
Sbjct: 181 IYVGALGVALFVISTATISAIVAVVIAAGWIGFFFMVWLAICKSFGLAKRSVSASNSAIS 222

Query: 241 AFSHARRAHKD 252
           AFS+ARRAHKD
Sbjct: 241 AFSYARRAHKD 222

[Close]

BLAST of CmoCh04G023880 vs. NCBI nr
Match: XP_022922733.1 (uncharacterized protein LOC111430635 [Cucurbita moschata])

HSP 1 Score: 386.3 bits (991), Expect = 2.0e-103
Identity = 223/251 (88.84%), Postives = 223/251 (88.84%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ
Sbjct: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVIS                   
Sbjct: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA
Sbjct: 121 ---------VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS
Sbjct: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 223

Query: 241 AFSHARRAHKD 252
           AFSHARRAHKD
Sbjct: 241 AFSHARRAHKD 223

[Close]

BLAST of CmoCh04G023880 vs. NCBI nr
Match: XP_023514904.1 (uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.7 bits (979), Expect = 4.8e-102
Identity = 220/251 (87.65%), Postives = 223/251 (88.84%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAEKYDSDDRNGTVPV+EQDRTSHKSKGVYNMD+TVYETLRRLIAEVFSPDKAKGSSLFQ
Sbjct: 1   MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDQTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVIS                   
Sbjct: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA
Sbjct: 121 ---------VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLA+RKSFGIAKQSMSAGSSAIS
Sbjct: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIAKQSMSAGSSAIS 223

Query: 241 AFSHARRAHKD 252
           AFSHARRAHKD
Sbjct: 241 AFSHARRAHKD 223

[Close]

BLAST of CmoCh04G023880 vs. NCBI nr
Match: KAG6602021.1 (hypothetical protein SDJN03_07254, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032716.1 hypothetical protein SDJN02_06766 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381.7 bits (979), Expect = 4.8e-102
Identity = 219/251 (87.25%), Postives = 223/251 (88.84%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAEKYDSDDRNGTVPV+EQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ
Sbjct: 1   MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVSITENGP+VEKACRNIGRDVLCWTRRGSPLRALLVIS                   
Sbjct: 61  RVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTIALLALTGLLIFLLFFLAATFNA+VISLLVSLAAVGGFLALFFACITA
Sbjct: 121 ---------VGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLA+RKSFGIAKQSMSAGSSAIS
Sbjct: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIAKQSMSAGSSAIS 223

Query: 241 AFSHARRAHKD 252
           AFSHARRAHKD
Sbjct: 241 AFSHARRAHKD 223

[Close]

BLAST of CmoCh04G023880 vs. NCBI nr
Match: XP_022990837.1 (uncharacterized protein LOC111487608 [Cucurbita maxima])

HSP 1 Score: 369.4 bits (947), Expect = 2.5e-98
Identity = 214/251 (85.26%), Postives = 220/251 (87.65%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAEKYDSDDRNGTVPVDEQ+RTSHKSKG+++ D+TVYETLRRLIAEVFSPDKAKGSSLFQ
Sbjct: 1   MAEKYDSDDRNGTVPVDEQERTSHKSKGLHSEDQTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVSITENGPAVEKACRNIG DVLCWTRRGSPLRALLVIS                   
Sbjct: 61  RVKVSITENGPAVEKACRNIGCDVLCWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA
Sbjct: 121 ---------VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLA+RKSFGIAKQSMSAGSS IS
Sbjct: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIAKQSMSAGSSVIS 223

Query: 241 AFSHARRAHKD 252
           AFSHARRAHKD
Sbjct: 241 AFSHARRAHKD 223

[Close]

BLAST of CmoCh04G023880 vs. NCBI nr
Match: XP_038906498.1 (uncharacterized protein LOC120092475 [Benincasa hispida])

HSP 1 Score: 317.8 bits (813), Expect = 8.5e-83
Identity = 182/251 (72.51%), Postives = 202/251 (80.48%), Query Frame = 0


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAE YDSDDRN T PV+E+D +SH+SKGV   D TVYE LRRLI E+F PD+ KGSSLFQ
Sbjct: 1   MAEAYDSDDRNATGPVEEEDASSHQSKGVRVEDHTVYEPLRRLIVEIFFPDETKGSSLFQ 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVS+ ENGPAV +ACRN GRDVLCWTRRGSPLRALLVIS                   
Sbjct: 61  RVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRALLVIS------------------- 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                    VGTI LLALTG LIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA
Sbjct: 121 ---------VGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           +YIGAL VALFVISTATISAIV VVIAAGW+GFFCVVWLA+RKSFG+AK+S++A +SAIS
Sbjct: 181 IYIGALAVALFVISTATISAIVGVVIAAGWVGFFCVVWLAVRKSFGLAKRSVTASNSAIS 223

Query: 241 AFSHARRAHKD 252
           AFS+ARRAHKD
Sbjct: 241 AFSYARRAHKD 223

[Close]

BLAST of CmoCh04G023880 vs. TAIR 10
Match: AT5G16550.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-41
Identity = 107/220 (48.64%), Postives = 139/220 (63.18%), Query Frame = 0


Query: 34  RTVYETLRRLIAEVFSPDKAKG--SSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRG 93
           +++Y  +   I  +  PD   G  SS  +RV+ S+ ENGP + +A    GR++L WTRRG
Sbjct: 49  KSLYSLICLTIGSILFPDSKTGDASSFLERVRNSVAENGPKLREASERTGREILLWTRRG 108

Query: 94  SPLRALLVISVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAA 153
           S LRALLVI+                            +GTI LL    L++F LFF+AA
Sbjct: 109 SSLRALLVIT----------------------------MGTIVLLTTMALVVFTLFFVAA 168

Query: 154 TFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWI 213
           T NA++ISLL+SLA  GGFLALFF C+T VYIGAL+VA FVISTAT+SA+V+V+IA+GWI
Sbjct: 169 TANAIIISLLISLAVAGGFLALFFLCLTGVYIGALSVAAFVISTATVSAVVSVLIASGWI 228

Query: 214 GFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD 252
           GFF  VWL  R S  +AKQS+S   SAIS  + +R  H+D
Sbjct: 229 GFFYAVWLGTRGSLRLAKQSVSVVGSAISGNTISRHQHQD 240

The following BLAST results are available for this feature:

BLAST of CmoCh04G023880 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G023880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7P4	9.5e-104	88.84	uncharacterized protein LOC111430635 OS=Cucurbita moschata OX=3662 GN=LOC1114306...	[more]
A0A6J1JJZ4	1.2e-98	85.26	uncharacterized protein LOC111487608 OS=Cucurbita maxima OX=3661 GN=LOC111487608...	[more]
A0A6J1CIE7	1.7e-81	71.71	uncharacterized protein LOC111011773 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A0A0KNC3	3.3e-80	71.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G427940 PE=4 SV=1	[more]
A0A5A7V6K3	1.9e-75	69.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmoCh04G023880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922733.1	2.0e-103	88.84	uncharacterized protein LOC111430635 [Cucurbita moschata]	[more]
XP_023514904.1	4.8e-102	87.65	uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo]	[more]
KAG6602021.1	4.8e-102	87.25	hypothetical protein SDJN03_07254, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022990837.1	2.5e-98	85.26	uncharacterized protein LOC111487608 [Cucurbita maxima]	[more]
XP_038906498.1	8.5e-83	72.51	uncharacterized protein LOC120092475 [Benincasa hispida]	[more]

BLAST of CmoCh04G023880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16550.1	1.0e-41	48.64	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR35508:SF1	VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT	coord: 13..250
None	No IPR available	PANTHER	PTHR35508	VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT	coord: 13..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G023880.1	CmoCh04G023880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane