CmoCh04G021240 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G021240
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	mRNA decay activator protein ZFP36L2-like isoform X2
Location	Cmo_Chr04: 13959321 .. 13961390 (+)
RNA-Seq Expression	CmoCh04G021240
Synteny	CmoCh04G021240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTGCCCTACACGACGCCATACAACAAATGTTGACGCTAATTTCTCTCTCGCAATCCAACCCTCTCACCTGCGGATTCTAATCTCTGAATCATTCCAACTCCGAATTTTCATTTTCCAGGTACGTCTTCTACTCATTTCCTTGCACTCAAACCACACTCTTCCGGCTGCGTTCTGTTCCATCTCCAACAATTTCAAATCAATCTTCACGATATTTTGTATTCTGCCGGTGTGAGTTCCAATTGAAGTTGAGCCTTCACGTTTTCCATTTTGGACTCTGCACCGATCTGCACTTTCCTTTCAATTGACGACTTGTTCACAATGTGTGCATCTTAATTTGCGTTTTGAATGGAGCCCTAACATGTTTGATCCTATCACTTTGAATGAATTATTTTCTCTAGAAATGACTGGTTAGATCTTCTCTGTTCTCTGTTTTAGCCTCTGAATCTTATCATCCGCTATTTCTGTAAGTTTAATTCACCGATTCCTTGGAGAGTACTGCATCAGGATTGAACAAATCTCTGTTTCGAAATATTAGGGACATGAGCCTGGACATTAATTCTACGTCGCCAATGAACACTTCAAAATGCCGATAGATCTTCTTTTCTCTGTGCATAAAATCGCCTTTGATTAGTTTATCAATTTTCATCAGAAATTTCAGGTTCTTTTCCTGACTCATGGAAGATCGCCAGGGCAAGAGGAGCTCCAAAGCGTCAACTATCAAAGGCCTAAACGCTACGGTTCGGCCGATCAAAATTCAGATGGACAATCACCTCGTAATCGGCGGGACCGGACACTATCACCAAGAAACAAACTCCAAAATTCCAACAATTCTTGATCGTTACGCCGAGAAGCATGACCGTTCAACACCGATCGTAAGTTACTTCCGCTCTCGATCTCCTGTGGTAGGAAAATTACCATCCGTCGGCGACACATTTTCTACTCCGGTTGCGGACGTCATCAATGCCAACTACCGCTCCTCTATTATCAACCACTTCGCTAGCAGCACTTCCGGAAGCAGTAGCTTCGGTTCTCGGAGAGGAGGATCGTCTTTGTCGCCACTTTCGGCTATAGAGAATTTGGAAACGACACCTGTAAGGTCTCCACAAATTTATGGGACTCCATTGAAGGTCCATGAGGAAGTGATAGTAATGGATGAAATTTTGATCAGTTCGGTCCATGGAGGAGCGAAGACATTGAAGTCTGCCTTAGAGTCCGGAGGCGGCGGTGGTTCATCGTTAAGCAAAAATCAATACAGAACGGACATTTGCCGCTCCTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGGTTAGTTATCTTGTCCCCACTGTAATGGTACGATCTGTATAACTTCAATTTATATGCGGAGTACGCATACTTTTCTTCAAACAATTTTCTCAATCAGGCGCGTTAAATTTTTGGGAAAAACATTGATCTGTAATAAATGGAGTTGGGTTTTGTAATTTGTATGTGCTATTTGCAGTTTGCACATGGAAAGGAGGAGCTTCGGCCTGTTCATTTACCTCTTAAAACCAAACCTAAGGTAAGGTACGATCGACCTGTGATGATTAAATATAGTGCAAAATTTGTTGGAATAAAAAAAAATGTTAGATTTAGCATATTTCTTTGCTACTACAGTTTGGTGAACCATACTTGACGCACGGTCTCAAGTCCCGCAACAATCATTCACTAACAGGAATAGCTACAACAACGCAATCGAACTCATTCGATACCACCTTCAAAACTGAACTTAGCAGAAGAGGTCATTCAATAAATTCAATACACAACCTGAACACTGATTGGTCACCTGAAGATGATAGCATTGAAGCTATTGTCCCCGAAACAAAGTCCACAAGGGGAGATGTAGACCAATACATCCTTGAGGTTCTTTATGGTTCCACCACTGAGAGAGCCAAAAAGAGGCTTCCAGTTTTCGTTCAACTTTGCTCATCCCAACAAGAAGAATAGGGAGGGCCAAAGTTTTTTCCATCTTAAACTCATTTCTCGAAAATACATACACCATTTTGTTTTGAAACACTCATACTTAGCTTATGCGCAT

mRNA sequence

CTCTTGCCCTACACGACGCCATACAACAAATGTTGACGCTAATTTCTCTCTCGCAATCCAACCCTCTCACCTGCGGATTCTAATCTCTGAATCATTCCAACTCCGAATTTTCATTTTCCAGAAATTTCAGGTTCTTTTCCTGACTCATGGAAGATCGCCAGGGCAAGAGGAGCTCCAAAGCGTCAACTATCAAAGGCCTAAACGCTACGGTTCGGCCGATCAAAATTCAGATGGACAATCACCTCGTAATCGGCGGGACCGGACACTATCACCAAGAAACAAACTCCAAAATTCCAACAATTCTTGATCGTTACGCCGAGAAGCATGACCGTTCAACACCGATCGTAAGTTACTTCCGCTCTCGATCTCCTGTGGTAGGAAAATTACCATCCGTCGGCGACACATTTTCTACTCCGGTTGCGGACGTCATCAATGCCAACTACCGCTCCTCTATTATCAACCACTTCGCTAGCAGCACTTCCGGAAGCAGTAGCTTCGGTTCTCGGAGAGGAGGATCGTCTTTGTCGCCACTTTCGGCTATAGAGAATTTGGAAACGACACCTGTAAGGTCTCCACAAATTTATGGGACTCCATTGAAGGTCCATGAGGAAGTGATAGTAATGGATGAAATTTTGATCAGTTCGGTCCATGGAGGAGCGAAGACATTGAAGTCTGCCTTAGAGTCCGGAGGCGGCGGTGGTTCATCGTTAAGCAAAAATCAATACAGAACGGACATTTGCCGCTCCTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGAGCTTCGGCCTGTTCATTTACCTCTTAAAACCAAACCTAAGGTAAGGTACGATCGACCTTTTGGTGAACCATACTTGACGCACGGTCTCAAGTCCCGCAACAATCATTCACTAACAGGAATAGCTACAACAACGCAATCGAACTCATTCGATACCACCTTCAAAACTGAACTTAGCAGAAGAGGTCATTCAATAAATTCAATACACAACCTGAACACTGATTGGTCACCTGAAGATGATAGCATTGAAGCTATTGTCCCCGAAACAAAGTCCACAAGGGGAGATGTAGACCAATACATCCTTGAGGTTCTTTATGGTTCCACCACTGAGAGAGCCAAAAAGAGGCTTCCAGTTTTCGTTCAACTTTGCTCATCCCAACAAGAAGAATAGGGAGGGCCAAAGTTTTTTCCATCTTAAACTCATTTCTCGAAAATACATACACCATTTTGTTTTGAAACACTCATACTTAGCTTATGCGCAT

Coding sequence (CDS)

ATGGAAGATCGCCAGGGCAAGAGGAGCTCCAAAGCGTCAACTATCAAAGGCCTAAACGCTACGGTTCGGCCGATCAAAATTCAGATGGACAATCACCTCGTAATCGGCGGGACCGGACACTATCACCAAGAAACAAACTCCAAAATTCCAACAATTCTTGATCGTTACGCCGAGAAGCATGACCGTTCAACACCGATCGTAAGTTACTTCCGCTCTCGATCTCCTGTGGTAGGAAAATTACCATCCGTCGGCGACACATTTTCTACTCCGGTTGCGGACGTCATCAATGCCAACTACCGCTCCTCTATTATCAACCACTTCGCTAGCAGCACTTCCGGAAGCAGTAGCTTCGGTTCTCGGAGAGGAGGATCGTCTTTGTCGCCACTTTCGGCTATAGAGAATTTGGAAACGACACCTGTAAGGTCTCCACAAATTTATGGGACTCCATTGAAGGTCCATGAGGAAGTGATAGTAATGGATGAAATTTTGATCAGTTCGGTCCATGGAGGAGCGAAGACATTGAAGTCTGCCTTAGAGTCCGGAGGCGGCGGTGGTTCATCGTTAAGCAAAAATCAATACAGAACGGACATTTGCCGCTCCTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGAGCTTCGGCCTGTTCATTTACCTCTTAAAACCAAACCTAAGGTAAGGTACGATCGACCTTTTGGTGAACCATACTTGACGCACGGTCTCAAGTCCCGCAACAATCATTCACTAACAGGAATAGCTACAACAACGCAATCGAACTCATTCGATACCACCTTCAAAACTGAACTTAGCAGAAGAGGTCATTCAATAAATTCAATACACAACCTGAACACTGATTGGTCACCTGAAGATGATAGCATTGAAGCTATTGTCCCCGAAACAAAGTCCACAAGGGGAGATGTAGACCAATACATCCTTGAGGTTCTTTATGGTTCCACCACTGAGAGAGCCAAAAAGAGGCTTCCAGTTTTCGTTCAACTTTGCTCATCCCAACAAGAAGAATAG

Protein sequence

MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKHDRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSRRGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALESGGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRPFGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDDSIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE

Homology

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BLAST of CmoCh04G021240 vs. ExPASy Swiss-Prot
Match: P23949 (mRNA decay activator protein ZFP36L2 OS=Mus musculus OX=10090 GN=Zfp36l2 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 5.9e-08
Identity = 36/113 (31.86%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 122 GGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALESG 181
           GGSS  P           ++ P        V +E    D     +       L    +  
Sbjct: 85  GGSSCGPAGGGGLASYGQLKEPSGGSGTALVTKESKFRDRSFSENGERSQHLLHLQQQQK 144

Query: 182 GGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPV--HLPLKTK 233
           GG GS ++  +Y+T++CR +E+SG+C++G KCQFAHG  ELR +  H   KT+
Sbjct: 145 GGSGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTE 197

[Close]

BLAST of CmoCh04G021240 vs. ExPASy Swiss-Prot
Match: Q5ISE2 (mRNA decay activator protein ZFP36L3 OS=Mus musculus OX=10090 GN=Zfp36l3 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.9e-08
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 183 GGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPV--HLPLKTKP 234
           G  S  +  +Y+T++CR +E+SG C++GHKCQFAHG  ELR +  H   KT+P
Sbjct: 113 GSSSLATSERYKTELCRPFEESGICKYGHKCQFAHGYRELRTLSRHPKYKTEP 165

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BLAST of CmoCh04G021240 vs. ExPASy Swiss-Prot
Match: P47974 (mRNA decay activator protein ZFP36L2 OS=Homo sapiens OX=9606 GN=ZFP36L2 PE=1 SV=3)

HSP 1 Score: 59.7 bits (143), Expect = 7.6e-08
Identity = 44/158 (27.85%), Postives = 71/158 (44.94%), Query Frame = 0


Query: 89  TPVADVINANYRSSIINHFASST------------SGSSSFGSRRGGSSLSPLSAIENLE 148
           TPVA   ++ +    +   ++S             S S  F     GSS    +A     
Sbjct: 38  TPVAAAPSSGFAPGFLRRHSASNLHALAHPAPSPGSCSPKFPGAANGSSCGSAAAGGPTS 97

Query: 149 TTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALESGGGGGSSLSKNQYRTD 208
              ++ P   G    +++E    D     +       L    +  GGGGS ++  +Y+T+
Sbjct: 98  YGTLKEPSGGGGTALLNKENKFRDRSFSENGDRSQHLLHLQQQQKGGGGSQINSTRYKTE 157

Query: 209 ICRSWEDSGSCRFGHKCQFAHGKEELRPV--HLPLKTK 233
           +CR +E+SG+C++G KCQFAHG  ELR +  H   KT+
Sbjct: 158 LCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTE 195

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BLAST of CmoCh04G021240 vs. ExPASy Swiss-Prot
Match: P47980 (Protein TIS11 OS=Drosophila melanogaster OX=7227 GN=Tis11 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 188 LSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRPF 242
           ++ ++Y+T++CR +E++G C++G KCQFAHG  ELR VH     K K  Y R F
Sbjct: 131 MNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNVH--RHPKYKTEYCRTF 182

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BLAST of CmoCh04G021240 vs. ExPASy Swiss-Prot
Match: Q07352 (mRNA decay activator protein ZFP36L1 OS=Homo sapiens OX=9606 GN=ZFP36L1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 27/66 (40.91%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 169 GGAKTLKSALESGGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPV--H 228
           GG + L +  + GGG    ++ ++Y+T++CR +E++G+C++G KCQFAHG  ELR +  H
Sbjct: 94  GGERLLPTQKQPGGG---QVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRH 153

Query: 229 LPLKTK 233
              KT+
Sbjct: 154 PKYKTE 156

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BLAST of CmoCh04G021240 vs. ExPASy TrEMBL
Match: A0A6J1EQM3 (uncharacterized protein LOC111436579 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436579 PE=4 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 4.6e-189
Identity = 343/349 (98.28%), Postives = 343/349 (98.28%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRP 240
           GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK      
Sbjct: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK------ 240

Query: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300
           FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD
Sbjct: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300

Query: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 350
           SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE
Sbjct: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 343

[Close]

BLAST of CmoCh04G021240 vs. ExPASy TrEMBL
Match: A0A6J1EPR1 (uncharacterized protein LOC111436459 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436459 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 1.7e-188
Identity = 342/349 (97.99%), Postives = 342/349 (97.99%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRP 240
           GGGGGSSLSKNQYR DICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK      
Sbjct: 181 GGGGGSSLSKNQYRADICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK------ 240

Query: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300
           FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD
Sbjct: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300

Query: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 350
           SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE
Sbjct: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 343

[Close]

BLAST of CmoCh04G021240 vs. ExPASy TrEMBL
Match: A0A6J1IEX1 (uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472616 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178
Identity = 323/349 (92.55%), Postives = 332/349 (95.13%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSKAS IKGLN TVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKASIIKGLNPTVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           DRSTPIVSYFRSRSPVVGKLPS GDTFSTPVADVINA+YRSSIINHFASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSAGDTFSTPVADVINASYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSA+ENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSAL+S
Sbjct: 121 RGGSSLSPLSALENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRP 240
           G GGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLP+KTKPK      
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPVKTKPK------ 240

Query: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300
           FGEPYLTHGLKSRNNHSLTGIA TTQSNS   TFKTEL+RRGHSINSIHNLNTDWSP+DD
Sbjct: 241 FGEPYLTHGLKSRNNHSLTGIAATTQSNSLYATFKTELNRRGHSINSIHNLNTDWSPDDD 300

Query: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 350
            IE +VPETKSTRGDVDQ+ILEVLYGSTTERAKKRLPVFVQLCSS+ EE
Sbjct: 301 GIEVVVPETKSTRGDVDQHILEVLYGSTTERAKKRLPVFVQLCSSRLEE 343

[Close]

BLAST of CmoCh04G021240 vs. ExPASy TrEMBL
Match: A0A6J1ICU5 (uncharacterized protein LOC111472626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472626 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 4.0e-177
Identity = 321/349 (91.98%), Postives = 330/349 (94.56%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSK S IKGLN TVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKPSIIKGLNPTVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           DRSTPIVSYFRSRSPVVGKLPS GDT STPVADVINA+YRSSIINHFASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSAGDTCSTPVADVINASYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSA+ENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSAL+S
Sbjct: 121 RGGSSLSPLSALENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRP 240
           G GGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLP+KTKPK      
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPVKTKPK------ 240

Query: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300
           FGEPYLTHGLKSRNNHSLTGIA TTQSNS   TFKTEL+RRGHSINSIHNLNTDWSP+DD
Sbjct: 241 FGEPYLTHGLKSRNNHSLTGIAATTQSNSLYATFKTELNRRGHSINSIHNLNTDWSPDDD 300

Query: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 350
            IE +VPETKSTRGDVDQ+ILEVLYGSTTERAKKRLPVFVQLCSS+ EE
Sbjct: 301 GIEVVVPETKSTRGDVDQHILEVLYGSTTERAKKRLPVFVQLCSSRLEE 343

[Close]

BLAST of CmoCh04G021240 vs. ExPASy TrEMBL
Match: A0A6J1EW18 (mRNA decay activator protein ZFP36L2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436579 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 1.1e-126
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK 235
           GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK
Sbjct: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK 234

[Close]

BLAST of CmoCh04G021240 vs. NCBI nr
Match: XP_022930093.1 (uncharacterized protein LOC111436579 isoform X1 [Cucurbita moschata] >XP_022930094.1 uncharacterized protein LOC111436579 isoform X1 [Cucurbita moschata])

HSP 1 Score: 670.2 bits (1728), Expect = 9.4e-189
Identity = 343/349 (98.28%), Postives = 343/349 (98.28%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRP 240
           GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK      
Sbjct: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK------ 240

Query: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300
           FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD
Sbjct: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300

Query: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 350
           SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE
Sbjct: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 343

[Close]

BLAST of CmoCh04G021240 vs. NCBI nr
Match: XP_022930016.1 (uncharacterized protein LOC111436459 isoform X1 [Cucurbita moschata] >XP_022930017.1 uncharacterized protein LOC111436459 isoform X1 [Cucurbita moschata])

HSP 1 Score: 668.3 bits (1723), Expect = 3.6e-188
Identity = 342/349 (97.99%), Postives = 342/349 (97.99%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRP 240
           GGGGGSSLSKNQYR DICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK      
Sbjct: 181 GGGGGSSLSKNQYRADICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK------ 240

Query: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300
           FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD
Sbjct: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300

Query: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 350
           SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE
Sbjct: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 343

[Close]

BLAST of CmoCh04G021240 vs. NCBI nr
Match: KAG7032491.1 (mRNA decay activator protein ZFP36L3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 647.1 bits (1668), Expect = 8.5e-182
Identity = 334/350 (95.43%), Postives = 337/350 (96.29%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSKAS IKGLNATVRPIKIQMDNHLVIGGTGHY QETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKASIIKGLNATVRPIKIQMDNHLVIGGTGHYQQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSAL+S
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRP 240
           G GGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEE+RPVHLPLKTKPK+     
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEEIRPVHLPLKTKPKL----- 240

Query: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRR-GHSINSIHNLNTDWSPED 300
            GEPYLTHGLKSRNNHSLTGIA TTQSNS DTTFKTELSRR GHSINSIHNLNTDWSPED
Sbjct: 241 -GEPYLTHGLKSRNNHSLTGIAATTQSNSLDTTFKTELSRREGHSINSIHNLNTDWSPED 300

Query: 301 DSIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 350
           DSIEAIVPETKSTRGDVDQYILE LYGSTTERAKKRLPVFVQLCSSQQEE
Sbjct: 301 DSIEAIVPETKSTRGDVDQYILEGLYGSTTERAKKRLPVFVQLCSSQQEE 344

[Close]

BLAST of CmoCh04G021240 vs. NCBI nr
Match: KAG6601766.1 (hypothetical protein SDJN03_06999, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 642.1 bits (1655), Expect = 2.7e-180
Identity = 335/359 (93.31%), Postives = 338/359 (94.15%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSKAS IKGLNATVRPIKIQMDNHLVIGGTGHY QETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKASIIKGLNATVRPIKIQMDNHLVIGGTGHYQQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSAL+S
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQ---------FAHGKEELRPVHLPLKT 240
           G GGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQ         FAHGKEE+RPVHLPLKT
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQVSYLVPTVMFAHGKEEIRPVHLPLKT 240

Query: 241 KPKVRYDRPFGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRR-GHSINSIHN 300
           KPK+      GEPYLTHGLKSRNNHSLTGIA TTQSNS DTTFKTELSRR GHSINSIHN
Sbjct: 241 KPKL------GEPYLTHGLKSRNNHSLTGIAATTQSNSLDTTFKTELSRREGHSINSIHN 300

Query: 301 LNTDWSPEDDSIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 350
           LNTDWSPEDDSIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE
Sbjct: 301 LNTDWSPEDDSIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 353

[Close]

BLAST of CmoCh04G021240 vs. NCBI nr
Match: XP_023536031.1 (uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536040.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 641.7 bits (1654), Expect = 3.6e-180
Identity = 328/349 (93.98%), Postives = 333/349 (95.42%), Query Frame = 0


Query: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60
           MEDRQGKRSSKA+ IKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH
Sbjct: 1   MEDRQGKRSSKAAIIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120
           +RSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR
Sbjct: 61  ERSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180
           RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSAL+S
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPKVRYDRP 240
           G GGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK      
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK------ 240

Query: 241 FGEPYLTHGLKSRNNHSLTGIATTTQSNSFDTTFKTELSRRGHSINSIHNLNTDWSPEDD 300
           FGEPYLTHGLKSRNNHSLTGIA TTQSNS D TFKTELSRRGHSINSIHNLNTDWSPEDD
Sbjct: 241 FGEPYLTHGLKSRNNHSLTGIAATTQSNSLDITFKTELSRRGHSINSIHNLNTDWSPEDD 300

Query: 301 SIEAIVPETKSTRGDVDQYILEVLYGSTTERAKKRLPVFVQLCSSQQEE 350
            IE +VPETKSTRGDVDQ+I EVLYGSTTER KKRL VFVQLCSSQQEE
Sbjct: 301 DIEVVVPETKSTRGDVDQHIHEVLYGSTTERTKKRLLVFVQLCSSQQEE 343

[Close]

BLAST of CmoCh04G021240 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06
Identity = 27/63 (42.86%), Postives = 33/63 (52.38%), Query Frame = 0


Query: 166 SVHGGAKTLKSALESGGGGGSS------LSKNQYRTDICRSWEDSGSCRFGHKCQFAHGK 223
           SV GG  +    +  GGGG  S      L  + ++T IC  WE +G C FG KC FAHG 
Sbjct: 228 SVGGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGA 287

[Close]

BLAST of CmoCh04G021240 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 50.4 bits (119), Expect = 3.3e-06
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 194 RTDICRSWEDSGSCRFGHKCQFAHGKEELRPV 226
           +T++C  W+++G+C +G  CQFAHG +ELRPV
Sbjct: 234 KTELCNKWQETGACCYGDNCQFAHGIDELRPV 265

[Close]

BLAST of CmoCh04G021240 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 50.1 bits (118), Expect = 4.3e-06
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 194 RTDICRSWEDSGSCRFGHKCQFAHGKEELRPV 226
           +T++C  W+++G+C +G  CQFAHG +ELRPV
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELRPV 255

[Close]

BLAST of CmoCh04G021240 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 50.1 bits (118), Expect = 4.3e-06
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 194 RTDICRSWEDSGSCRFGHKCQFAHGKEELRPV 226
           +T++C  W+++G+C +G  CQFAHG +ELRPV
Sbjct: 223 KTELCNKWQETGTCPYGDHCQFAHGIKELRPV 254

The following BLAST results are available for this feature:

BLAST of CmoCh04G021240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23949	5.9e-08	31.86	mRNA decay activator protein ZFP36L2 OS=Mus musculus OX=10090 GN=Zfp36l2 PE=1 SV...	[more]
Q5ISE2	5.9e-08	49.06	mRNA decay activator protein ZFP36L3 OS=Mus musculus OX=10090 GN=Zfp36l3 PE=1 SV...	[more]
P47974	7.6e-08	27.85	mRNA decay activator protein ZFP36L2 OS=Homo sapiens OX=9606 GN=ZFP36L2 PE=1 SV=...	[more]
P47980	1.3e-07	46.30	Protein TIS11 OS=Drosophila melanogaster OX=7227 GN=Tis11 PE=2 SV=2	[more]
Q07352	1.3e-07	40.91	mRNA decay activator protein ZFP36L1 OS=Homo sapiens OX=9606 GN=ZFP36L1 PE=1 SV=...	[more]

BLAST of CmoCh04G021240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQM3	4.6e-189	98.28	uncharacterized protein LOC111436579 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EPR1	1.7e-188	97.99	uncharacterized protein LOC111436459 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IEX1	1.2e-178	92.55	uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ICU5	4.0e-177	91.98	uncharacterized protein LOC111472626 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EW18	1.1e-126	100.00	mRNA decay activator protein ZFP36L2-like isoform X2 OS=Cucurbita moschata OX=36...	[more]

BLAST of CmoCh04G021240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930093.1	9.4e-189	98.28	uncharacterized protein LOC111436579 isoform X1 [Cucurbita moschata] >XP_0229300...	[more]
XP_022930016.1	3.6e-188	97.99	uncharacterized protein LOC111436459 isoform X1 [Cucurbita moschata] >XP_0229300...	[more]
KAG7032491.1	8.5e-182	95.43	mRNA decay activator protein ZFP36L3, partial [Cucurbita argyrosperma subsp. arg...	[more]
KAG6601766.1	2.7e-180	93.31	hypothetical protein SDJN03_06999, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023536031.1	3.6e-180	93.98	uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of CmoCh04G021240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32360.1	1.1e-06	42.86	Zinc finger (CCCH-type) family protein	[more]
AT1G66810.1	3.3e-06	53.13	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	4.3e-06	53.13	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.2	4.3e-06	53.13	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 192..219 e-value: 5.1E-6 score: 36.0
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 193..219 e-value: 3.5E-7 score: 30.0
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 192..220 score: 15.422161
None	No IPR available	GENE3D	4.10.1000.10		coord: 186..225 e-value: 9.6E-17 score: 62.1
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 11..341
None	No IPR available	PANTHER	PTHR12547:SF142	ZINC FINGER C-X8-C-X5-C-X3-H TYPE PROTEIN	coord: 11..341
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 192..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021240.1	CmoCh04G021240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding