CmoCh04G020930 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G020930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cmo_Chr04: 12948680 .. 12949156 (-)
RNA-Seq Expression	CmoCh04G020930
Synteny	CmoCh04G020930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTTTCATTGCCACTTTCATGTTCCTCCTCGCCCTAACCAACGCTAAAAACGCCCCCCGTGACTACCTCGCGCTTCACAACCGTGCTCGAGCCCAGGTCGGCTTCGGTCCCATGCAATGGAGCAACACCATGGCCACATACTCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAATCGGGCCGTATGGAGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACAAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGTGGCTTGGATGTGCTAGAGTGCCCTGTAAGAATAATTCTCAATTTGTTGTTTGCAATTATGATCCTCCTAGTAACTATATTGGGAAAAAGCCTTATGGATCTTCTTTGTAA

mRNA sequence

ATGGCTGCTTTCATTGCCACTTTCATGTTCCTCCTCGCCCTAACCAACGCTAAAAACGCCCCCCGTGACTACCTCGCGCTTCACAACCGTGCTCGAGCCCAGGTCGGCTTCGGTCCCATGCAATGGAGCAACACCATGGCCACATACTCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAATCGGGCCGTATGGAGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACAAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGTGGCTTGGATGTGCTAGAGTGCCCTGTAAGAATAATTCTCAATTTGTTGTTTGCAATTATGATCCTCCTAGTAACTATATTGGGAAAAAGCCTTATGGATCTTCTTTGTAA

Coding sequence (CDS)

ATGGCTGCTTTCATTGCCACTTTCATGTTCCTCCTCGCCCTAACCAACGCTAAAAACGCCCCCCGTGACTACCTCGCGCTTCACAACCGTGCTCGAGCCCAGGTCGGCTTCGGTCCCATGCAATGGAGCAACACCATGGCCACATACTCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAATCGGGCCGTATGGAGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACAAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGTGGCTTGGATGTGCTAGAGTGCCCTGTAAGAATAATTCTCAATTTGTTGTTTGCAATTATGATCCTCCTAGTAACTATATTGGGAAAAAGCCTTATGGATCTTCTTTGTAA

Protein sequence

MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGDCAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRSSVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGSSL

Homology

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BLAST of CmoCh04G020930 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-49
Identity = 89/155 (57.42%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           +A FI TF  L+  + A+N+P+DYL  HN AR QVG GPM W N +A Y+Q YA +R GD
Sbjct: 8   VACFI-TFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGD 67

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           C MIHS GPYGEN+AA  +P+   A AVK+W ++K  YD+ SN C+GG CGHYTQ+VWR+
Sbjct: 68  CGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRN 127

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYG 156
           SV LGCARV   N   F+ CNYDPP N+IG++P+G
Sbjct: 128 SVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPFG 160

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BLAST of CmoCh04G020930 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.2e-42
Identity = 75/154 (48.70%), Postives = 107/154 (69.48%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           +  F+A    L+  + A+++P+DYL +HN+AR  VG GPMQW   +A Y+++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           C +IHS GPYGEN+A G   + +G  AV +W ++K  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPY 155
           SV LGCA+V C N    + CNYDP  NY+ +KPY
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

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BLAST of CmoCh04G020930 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.9e-41
Identity = 79/156 (50.64%), Postives = 111/156 (71.15%), Query Frame = 0


Query: 3   AFIATFMFLLAL---TNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKG 62
           + + T + +LA+     A+N+P+DYLA+HN ARAQVG GPM W   +A+ +Q YA  R G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 63  DCAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGE-CGHYTQMVW 122
           DC +IHS    GEN+A G   +FTG  AV+LW +++P Y++A+N+C+GG+ CGHYTQ+VW
Sbjct: 67  DCNLIHS--GAGENLAKG-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVW 126

Query: 123 RSSVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPY 155
           R+SV LGC R  C N   F+ CNYDP  N++G++PY
Sbjct: 127 RNSVRLGCGRARCNNGWWFISCNYDPVGNWVGERPY 159

[Close]

BLAST of CmoCh04G020930 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-40
Identity = 75/154 (48.70%), Postives = 101/154 (65.58%), Query Frame = 0


Query: 5   IATFMFLLALTN---AKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGDC 64
           ++T +  L +++   A+N+ +DYL  HN ARA VG  P+ W + +A Y+Q YA +   DC
Sbjct: 15  VSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADC 74

Query: 65  AMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGE-CGHYTQMVWRS 124
            ++HS G YGEN+A G     T A AV++W ++K  YDH SN C  G+ CGHYTQ+VWR+
Sbjct: 75  NLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 134

Query: 125 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPY 155
           SV +GCARV C N    V CNYDPP NY G+ PY
Sbjct: 135 SVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of CmoCh04G020930 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-40
Identity = 72/144 (50.00%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 11  LLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGDCAMIHSIGPY 70
           L+    A+++ +DY+  HN+AR+Q+G GPMQW   +A Y++ YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 71  GENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRSSVWLGCARVP 130
           GEN+A     + +G  AV LW N+K  Y++ +N C  G CGHYTQ+VWR+SV LGCA+V 
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGCAKVR 139

Query: 131 CKNNSQFVVCNYDPPSNYIGKKPY 155
           C N    + CNYDPP NY  +KPY
Sbjct: 140 CNNGGTIISCNYDPPGNYANQKPY 161

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BLAST of CmoCh04G020930 vs. ExPASy TrEMBL
Match: A0A6J1EPW6 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436562 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 4.4e-91
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD
Sbjct: 10  MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 69

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS
Sbjct: 70  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 129

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGSSL 159
           SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGSSL
Sbjct: 130 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGSSL 167

[Close]

BLAST of CmoCh04G020930 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.3e-79
Identity = 139/156 (89.10%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           M AFIATF+FLLALTNA+NAP DYL LHNRARAQVG GPMQWSNT+A Y+QAYAEKRKGD
Sbjct: 9   MVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHS GPYGENIAAGYYPEFTGADAVKLWAN+KPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRS 128

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGS 157
           SV LGCARVPCK NSQFVVCNYDPP NYIG+KPY S
Sbjct: 129 SVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS 164

[Close]

BLAST of CmoCh04G020930 vs. ExPASy TrEMBL
Match: A0A6J1H3H8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460070 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.6e-79
Identity = 138/156 (88.46%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           M AFIATF+FLLALTNA+NAP DYLALHNRARAQVG GPMQWSNT+A Y+QAYA+KRKGD
Sbjct: 40  MVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 99

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHS GPYGENIAAGYYPEFTGADAVKLW N+KPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 100 CAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRS 159

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGS 157
           SV LGCARVPCK NSQFVVCNYDPP NYIG+KPY S
Sbjct: 160 SVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS 195

[Close]

BLAST of CmoCh04G020930 vs. ExPASy TrEMBL
Match: A0A6J1EPC2 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436558 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.7e-79
Identity = 138/156 (88.46%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           M AFIATF+FLLALTNA+NAP DYL LHN+ARAQVG GPMQWSNT+A Y+QAYAEKRKGD
Sbjct: 9   MVAFIATFIFLLALTNAQNAPCDYLVLHNQARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHS GPYGENIAAGYYPEFTGADAVKLWAN+KPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRS 128

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGS 157
           SV LGCARVPCK NSQFVVCNYDPP NYIG+KPY S
Sbjct: 129 SVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS 164

[Close]

BLAST of CmoCh04G020930 vs. ExPASy TrEMBL
Match: A0A6J1H6J8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460079 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.5e-78
Identity = 138/156 (88.46%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           M AFIATF FLLALTNA+NAP DYLALHNRARAQVG GPMQWSNT+A Y+QAYAEKRKGD
Sbjct: 9   MVAFIATFTFLLALTNAQNAPSDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGD 68

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHS GPYGENIAAGYYPEFTGADAVKLW N+KPLYDHA NKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHALNKCVGGECGHYTQMVWRS 128

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGS 157
           SV LGCARVPCK NSQFVVCNYDPP NYIG+KPY S
Sbjct: 129 SVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS 164

[Close]

BLAST of CmoCh04G020930 vs. NCBI nr
Match: XP_022930076.1 (basic form of pathogenesis-related protein 1-like, partial [Cucurbita moschata])

HSP 1 Score: 343.6 bits (880), Expect = 9.1e-91
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD
Sbjct: 10  MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 69

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS
Sbjct: 70  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 129

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGSSL 159
           SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGSSL
Sbjct: 130 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGSSL 167

[Close]

BLAST of CmoCh04G020930 vs. NCBI nr
Match: XP_023542698.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 139/158 (87.97%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           MAAFIATFMF+LALTNA+NAPRDYLALHNR RAQVG GPMQWSNT+A Y+Q YAEKRKGD
Sbjct: 9   MAAFIATFMFVLALTNAQNAPRDYLALHNRVRAQVGVGPMQWSNTVAAYAQTYAEKRKGD 68

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHS GPYGENIAAGYYPEFTG DAVKLWA +KPLYD+ASNKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGVDAVKLWAKEKPLYDYASNKCVGGECGHYTQMVWRS 128

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGSSL 159
           SV LGCARVPCK NSQFVVCNYDPP NYIG KPYGSS+
Sbjct: 129 SVRLGCARVPCKGNSQFVVCNYDPPGNYIGDKPYGSSV 166

[Close]

BLAST of CmoCh04G020930 vs. NCBI nr
Match: XP_023522017.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.8 bits (782), Expect = 2.1e-79
Identity = 140/156 (89.74%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           MAAF+ATFMFLLALTNA+NAP DYLALHNRARAQVG  PMQWSNT+A Y+QAYAEKRKGD
Sbjct: 9   MAAFMATFMFLLALTNAQNAPSDYLALHNRARAQVGVDPMQWSNTVAAYAQAYAEKRKGD 68

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHS GPYGENIAAGYYPEFTGADAVKLWAN+KPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRS 128

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGS 157
           SV LGCARVPCK NSQFVVCNYDPP NYIG+KPY S
Sbjct: 129 SVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS 164

[Close]

BLAST of CmoCh04G020930 vs. NCBI nr
Match: XP_022930064.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022930070.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022954130.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 304.7 bits (779), Expect = 4.7e-79
Identity = 139/156 (89.10%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           M AFIATF+FLLALTNA+NAP DYL LHNRARAQVG GPMQWSNT+A Y+QAYAEKRKGD
Sbjct: 9   MVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHS GPYGENIAAGYYPEFTGADAVKLWAN+KPLYDHASNKC+GGECGHYTQMVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRS 128

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGS 157
           SV LGCARVPCK NSQFVVCNYDPP NYIG+KPY S
Sbjct: 129 SVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS 164

[Close]

BLAST of CmoCh04G020930 vs. NCBI nr
Match: XP_023521428.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.7 bits (779), Expect = 4.7e-79
Identity = 139/156 (89.10%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           MAAF+ATF+FLLALTNA+NAP DYLALHNRARAQVG GPMQWSNT+A Y+QAYAEKRKGD
Sbjct: 9   MAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGD 68

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           CAMIHS GPYGENIAAGYYPEFTGADAVKLWAN+KPLYDHASNKC+GGECGHYT MVWRS
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTHMVWRS 128

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPYGS 157
           SV LGCARVPCK NSQFVVCNYDPP NYIG+KPY S
Sbjct: 129 SVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDS 164

[Close]

BLAST of CmoCh04G020930 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 3.1e-44
Identity = 79/151 (52.32%), Postives = 100/151 (66.23%), Query Frame = 0


Query: 5   IATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGDCAMI 64
           I    FL+  TNA+N P+DYL  HN ARAQVG   + W  T+A Y+  Y+  RK DC ++
Sbjct: 11  IVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLV 70

Query: 65  HSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGG-ECGHYTQMVWRSSVW 124
           HS GPYGEN+A G    F+   AVKLW ++KP Y +A N C GG +C HYTQ+VWR SV 
Sbjct: 71  HSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVK 130

Query: 125 LGCARVPCKNNSQFVVCNYDPPSNYIGKKPY 155
           +GCARV C N   FV CNY+ P N++G+ PY
Sbjct: 131 IGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmoCh04G020930 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-43
Identity = 79/144 (54.86%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 13  ALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGDCAMIHSIGPYGE 72
           A  N    P++ L +HN+ARA VG GPM W+ T+ATY+Q+YA +R  DCAM HS+GP+GE
Sbjct: 34  ANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGE 93

Query: 73  NIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMG-GECGHYTQMVWRSSVWLGCARVPC 132
           N+AAG +   +G  A + W  +K  YD+ SN C G G CGHYTQ+VWR SV LGCA V C
Sbjct: 94  NLAAG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRC 153

Query: 133 KNNSQ-FVVCNYDPPSNYIGKKPY 155
           KN+   +V+C+YDPP NYIG++PY
Sbjct: 154 KNDEYIWVICSYDPPGNYIGQRPY 176

[Close]

BLAST of CmoCh04G020930 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 171.4 bits (433), Expect = 5.8e-43
Identity = 75/154 (48.70%), Postives = 107/154 (69.48%), Query Frame = 0


Query: 1   MAAFIATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGD 60
           +  F+A    L+  + A+++P+DYL +HN+AR  VG GPMQW   +A Y+++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  CAMIHSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRS 120
           C +IHS GPYGEN+A G   + +G  AV +W ++K  Y++A+N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVWLGCARVPCKNNSQFVVCNYDPPSNYIGKKPY 155
           SV LGCA+V C N    + CNYDP  NY+ +KPY
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh04G020930 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 7.6e-43
Identity = 77/151 (50.99%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 5   IATFMFLLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGDCAMI 64
           I  F+ L+    A+++P+D+LA+HNRARA+VG GP++W   +A Y++ YA +RKGDCAM 
Sbjct: 14  ITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMK 73

Query: 65  HSIGPYGENIAAGYYPEFTGADAVKLWANKKPLYDHASNKC-MGGECGHYTQMVWRSSVW 124
           HS G YGENIA       TG  AV +W +++  YD+ SN C    +CGHYTQ+VWR+S  
Sbjct: 74  HSSGSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSER 133

Query: 125 LGCARVPCKNNSQFVVCNYDPPSNYIGKKPY 155
           LGCA+V C N   F+ CNYDPP N++G+ PY
Sbjct: 134 LGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmoCh04G020930 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-41
Identity = 72/144 (50.00%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 11  LLALTNAKNAPRDYLALHNRARAQVGFGPMQWSNTMATYSQAYAEKRKGDCAMIHSIGPY 70
           L+    A+++ +DY+  HN+AR+Q+G GPMQW   +A Y++ YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 71  GENIAAGYYPEFTGADAVKLWANKKPLYDHASNKCMGGECGHYTQMVWRSSVWLGCARVP 130
           GEN+A     + +G  AV LW N+K  Y++ +N C  G CGHYTQ+VWR+SV LGCA+V 
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGCAKVR 139

Query: 131 CKNNSQFVVCNYDPPSNYIGKKPY 155
           C N    + CNYDPP NY  +KPY
Sbjct: 140 CNNGGTIISCNYDPPGNYANQKPY 161

The following BLAST results are available for this feature:

BLAST of CmoCh04G020930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	1.1e-49	57.42	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P33154	8.2e-42	48.70	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q04108	6.9e-41	50.64	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P08299	2.0e-40	48.70	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
Q9ZNS4	2.0e-40	50.00	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]

BLAST of CmoCh04G020930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPW6	4.4e-91	100.00	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EQJ7	2.3e-79	89.10	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H3H8	6.6e-79	88.46	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EPC2	8.7e-79	88.46	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H6J8	1.5e-78	88.46	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of CmoCh04G020930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930076.1	9.1e-91	100.00	basic form of pathogenesis-related protein 1-like, partial [Cucurbita moschata]	[more]
XP_023542698.1	1.2e-79	87.97	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023522017.1	2.1e-79	89.74	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930064.1	4.7e-79	89.10	basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_02293...	[more]
XP_023521428.1	4.7e-79	89.10	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh04G020930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50060.1	3.1e-44	52.32	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G19990.1	3.4e-43	54.86	pathogenesis-related protein-1-like	[more]
AT2G14610.1	5.8e-43	48.70	pathogenesis-related gene 1	[more]
AT4G33720.1	7.6e-43	50.99	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	1.4e-41	50.00	basic pathogenesis-related protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 87..100 score: 31.43 coord: 40..58 score: 29.53 coord: 110..126 score: 61.61 coord: 137..150 score: 50.98
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 12..154
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 40..58 score: 23.36 coord: 85..100 score: 24.22 coord: 109..128 score: 49.69
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 19..150 e-value: 4.1E-50 score: 182.5
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 25..142 e-value: 9.7E-21 score: 74.9
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 14..158 e-value: 3.9E-41 score: 142.7
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 13..154
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 12..154
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 21..154 e-value: 3.1524E-77 score: 224.05
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 111..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G020930.1	CmoCh04G020930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane