
CmoCh04G020080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACATATTGACGGAACCATGTGTACACTTTCATCTATCTTTCTGGAATAGGCTCAAGCAACCCAAATGGCCTCGACCTTGAGCGAATCCTCCAGAATACCCACAAATGCTTCAAGGATTGTGTTGATAACCGGCGTGAGCAAAGGTTTAGGGAGAGCCCTAGCCTTGGAGTTAGCTAACCGTGGTCACACCATAATTGGCTGTTCACGTGACCAACCTAAACTTGATTCCCTTCGTCACCAACTTTCTTCCAATAACCACTTGCTCTTCAATGCTAATGTGGTAAGCAAATGCTCTAACCCAACGTCCTAAGTACTTAGAAAAGTGACTGAAAAGGTTTGTTTTGCAGAGATCAAACGATAGTGTTGAAGAGCTAACAAAAGCGGTTGTCCAAAACAAACTCGTTCCTGATATCATTGGTATTCCGCTCTCTTTTTTCATATAATTTCTTACTTCAACCAAAATTTGAGAAACTAAGCACTTTTTTCTGGATTATTGACAGTGAATAATGCCGCTGTTATTAATAGAAATAGGAACCTATGGGAGGTGGATGTCGAAGAATTTGATAATGTTATAGATACCAATGTCAAAGGGACAGCAAACGTATTGCGCCATTTCATTCCTCTTATGATTCAAAACAAGCATGGAATAATCATTAACATGTCTTCAACTGCCGGAAGAAATGGAATTGTACATGTAAGTCATTTATATTAAACTTTTATGGAAAGATTAGTGACTCCTGAAAATAGTTATTAACTTAATAAGTTTAGAAAAATGGTTAGTGATTTATGGAAGAGATTTGTGAGTAGTGGTGAGATTGTGGAGAAATTTAAGAAAATAGCTAGTGATTTATTGATGAGAATGTTGGTAGTTTTAACGGAAGTTTAGAAAATTTGTTAATGTTTACTCCTTTATAAATACTCACTAAATGTATTCCCTATTCACAACAACAAAGAAAATTGAAAAGCATAGTGCAAGTTGTTCTTTCTATATTTATTTCTTTCGATATATTTGAGTTGTGGGTCATATCCAACATTTGGTATTGGAGCTCGGATGCTAAAACAAAGTCACCATACAAAGTCGTCGGAGGAGATATGACGATGATAAAAGCGAAAAATAGGGGAATGTAACGATCCAGTACGCGTTACTTGTGAAGAGTAACTGCGCAACATGGTCAATAAAGATGCGTGTTAACTTACAGGCACAAGACGTGTGGGACGCCATCAAACATAGTGATGATGTTGAGGACCGTAATAGGATGACTCTTGCCACCATCAACCAAGTAGTCTCGGAGGACGTCCTTCTCATGTTGGTAGAGAAGGACTCGGCAAAGGCAGTGTTGGATACATTGCAAACAATACATGTGGTGTGGAACATGTCAAGGAAGCAAAGGTGCAGACCTTGAAAAGTGAGTTCGAGCTATTCCTCAAGATTCATGAAGATTGTTGCCTCCATTGATTAGTTCAGCAACCTCAAGAATATGTCGGTTGAGGAGGTCGTTGATCATCTTAAGGTCCATGAGGAGAGATTTCCTGGATATAAAAACAAAGAGGAGGAGAAATGCCTTTTACTCACACATGATGAGTGGCTCGCATGGACGCAAAAGAAAGATGTAGCTGACTCTTCTTTTTTAGGTACGAGGGGATGTGACAGCCATAACAAGGAAAATAAAGGTCGTGGATGTGGAAGTAGAGGAGGTCATGACAATAACTCACAAATCCATGACAATGCCAACCCTGGAAGGATGAGAATATGATCAAGTGTTACTCTTGTGGAAAATATGGACATTATGTGGTAGAGTGGTGCAACATGGAGTGCGGTGAGGAGGCAAATCTCACATTCATGGATGATGAAGAGCCCAAATTAATGTTGGCCAAGAAAATGCCAAACTTGTTGATGCTCAATAAAGAGAAGGTTATGACAAACATCCTAGCACATGGAGAAGACCAAATGAAGACTATCACGTGGTGCCTAGATAACGAAGTGAGCAATCACATGACTGGAGATAGAGAAAAGTTTAAGAAACTTGAGAAATTCATTGGAAACATGAAGTTTTGTGACGAATCAAAAGGCCCATCTTGTTTTAGTGTAAAAACGACGATCAACATTTATTGACCAAGGTGTATTACATGTTGTCTTTGACGAATGTGAGGAAATCGTTGACGGAGGAAAAAAGCCGAAGAAATTGTTGGGAGAAGAAAATAATGAAAAAACAAAGAGAAGACAATATTTGCACCGAAGACCCCATGGATTTCATTTCTCATTCAGTTGAGATATTTAAATAACGAATGAAAGAAATGGGCAACTTAATTAAGGCGCTTCCACACGACGTGGACTTTCCACTCACTCTAATTGTGGGTTTAAGAGAAAAATAGTTACCTAAAAAATAGTTAACTAAAAATTAGGATCACTTTCACTCAAAGGTAAGGATTTATCTAACAATCTCGTCCTAAAACCTTATCGTATATCTACCTTATTGTTTGAACTTTGATCTGAGCCCTATGGCTCGATGTCCCGGCAGCATGTCCTTCAGACTCAACCTCTTCTTCCAGCTCGCGCACCGCCAGTCCAGGTGGTTCACCTCCTCCTGGTAGGTCTTCCATCCTCTGGTACCTGGTCACCAGACCATCATTGTGATTGGCATCCAGCGTCGAATCCGCAGTACGTGGTGTTGCGAACTCCACTAGTTTAGGGGGTACAGCAGGAGTCGTGGTTGGTATTGATATAGGCGTATCCGGTGTAGCTGCTGGCGGTGGTGACGATTCTCTATGTTGTGCTTCTCCTTCTCCCGGTTCAGTGATGAGGTACTCCACCGTGAATTGATTTGGGTTTTGGTCTGTCGAGGTAAATTCTCCGCCTCGGTCCGTATTCTCAAAATACCTATATCTACTCCTGTGGTAATTGGTGCGTGATTTCGTAATACACCAATTTGTCCATTATTCGTAACTAAAATTATTTCTTTCTTTTCTGAAGCCCAAATAATTCGATTCAGAGGCAGGACACTAAGATTTAAGGTCATTTCTTCACTTTGCTCTCCGTTTCTTTCACTCAAAGGTAGGGATTTATCTAACATTACATACCGAGTTTGAAGAGTAGATTATTAGTCTTGGTCAAATTATAGAAGAATGTAGTAGAGTTGATTTAGTCGATTGGTTCTTTAAGATATTTGACAGAAACGAAGTTTTGTTGATGAAGGTAAAACGGTCGCAGAACCGCTTGTATAAGATACTACTGATCAACATCTTCCAAAAGTATCTATTAACATTGGCAACAAGAAAGGAGTGAAGAAATGAGTGGATTAGGAGAAAAAAGAATCGAATAACAGAGCAAGGAAGATAATAGAGACTACTTCAATCGGCAAAGAGAAACCTACAATTTGGTATGTTCATCAAACTTGTCATCTCAATCAGAGAAGTGGAAGAAATTACATAATGTGGAATTAAAATTTCTTATGAAGAAGACGAAAGTTGATAAGGGACCAAGCAACATTGATTTTATAGAGCAACGTGTAGATATTCTCACCAAGGCCCTAACAAGGGTTAAGTTTTATAGACATGTTGGAGTTATTCAAATTTTACTTAGTAATAATAGTTATGAATGAGCGGAGTAAGTTTAGAAAAATGGTAAGTGATTTATTTAGGAGGATTGTTGCCGTTCTCTTCCCTGTAAATAGTCATGAGATGTATGTTCACAGCAACAAAGAGAATGGAAAAGCATAGTGTTTAAGGTTTTTTGTTCTAAGAAACTCTCCCTTCAGATTGTTCTTTATACTTCATTTATTTGTTTCAATATATTTCAACTGAGAAAGTAGTATCCAACAAAGATGACATATGTTTAATTTTACTTTATCGCCAGATTGCACCATATTGTGCATCAAAATGGGCAGTTGAGGGGTTAAGCAAATCTGTAGCAAAAGAATTGCCGGAAGGAATGGCTGTTGTGACCTTAGATCCAGGCCTCATAAACACAGACATGCTCGTTTCATTTGCTGGCAGTTCAGCTTCAAAATATCTAACGCCTGAACGATGGTATGGATATCATCAAATCATATATTCAACACTGAAATTTTTATATAAGTATATCCTTTTGTGTGTACTTATACATTCATTATTCATTGTAATAAGGGCTATAAAAGCAGCGACATTAATTCTTGATCTCACCACATCAGACAATGGAGCTTCCCTCACAGTTAAGGATCCAACCGAGTTGTCCAGCCCATAATTTCTATGCCCTTGGATGACAATTAATTTGGTAAAGCATCATTGATAGAATGTTTAGATATTAGATAAATGAGAGTGATGAATGTATAAATGTGCATAATGTAAATTTACTATGTGTAATATGAAATGCATAAATATTGACACGAGATATTAGTTAAATTGATGTGCTGTAATTTGTGAGATGTTGTAGTAGAAATTGTGTTGATAGGATGTGTAGATGTATTTAGTTGTATTTACGATGGAG GACATATTGACGGAACCATGTGTACACTTTCATCTATCTTTCTGGAATAGGCTCAAGCAACCCAAATGGCCTCGACCTTGAGCGAATCCTCCAGAATACCCACAAATGCTTCAAGGATTGTGTTGATAACCGGCGTGAGCAAAGGTTTAGGGAGAGCCCTAGCCTTGGAGTTAGCTAACCGTGGTCACACCATAATTGGCTGTTCACGTGACCAACCTAAACTTGATTCCCTTCGTCACCAACTTTCTTCCAATAACCACTTGCTCTTCAATGCTAATGTGAGATCAAACGATAGTGTTGAAGAGCTAACAAAAGCGGTTGTCCAAAACAAACTCGTTCCTGATATCATTGTGAATAATGCCGCTGTTATTAATAGAAATAGGAACCTATGGGAGGTGGATGTCGAAGAATTTGATAATGTTATAGATACCAATGTCAAAGGGACAGCAAACGTATTGCGCCATTTCATTCCTCTTATGATTCAAAACAAGCATGGAATAATCATTAACATGTCTTCAACTGCCGGAAGAAATGGAATTGTACATATTGCACCATATTGTGCATCAAAATGGGCAGTTGAGGGGTTAAGCAAATCTGTAGCAAAAGAATTGCCGGAAGGAATGGCTGTTGTGACCTTAGATCCAGGCCTCATAAACACAGACATGCTCGTTTCATTTGCTGGCAGTTCAGCTTCAAAATATCTAACGCCTGAACGATGGGCTATAAAAGCAGCGACATTAATTCTTGATCTCACCACATCAGACAATGGAGCTTCCCTCACAGTTAAGGATCCAACCGAGTTGTCCAGCCCATAATTTCTATGCCCTTGGATGACAATTAATTTGGTAAAGCATCATTGATAGAATGTTTAGATATTAGATAAATGAGAGTGATGAATGTATAAATGTGCATAATGTAAATTTACTATGTGTAATATGAAATGCATAAATATTGACACGAGATATTAGTTAAATTGATGTGCTGTAATTTGTGAGATGTTGTAGTAGAAATTGTGTTGATAGGATGTGTAGATGTATTTAGTTGTATTTACGATGGAG ATGGCCTCGACCTTGAGCGAATCCTCCAGAATACCCACAAATGCTTCAAGGATTGTGTTGATAACCGGCGTGAGCAAAGGTTTAGGGAGAGCCCTAGCCTTGGAGTTAGCTAACCGTGGTCACACCATAATTGGCTGTTCACGTGACCAACCTAAACTTGATTCCCTTCGTCACCAACTTTCTTCCAATAACCACTTGCTCTTCAATGCTAATGTGAGATCAAACGATAGTGTTGAAGAGCTAACAAAAGCGGTTGTCCAAAACAAACTCGTTCCTGATATCATTGTGAATAATGCCGCTGTTATTAATAGAAATAGGAACCTATGGGAGGTGGATGTCGAAGAATTTGATAATGTTATAGATACCAATGTCAAAGGGACAGCAAACGTATTGCGCCATTTCATTCCTCTTATGATTCAAAACAAGCATGGAATAATCATTAACATGTCTTCAACTGCCGGAAGAAATGGAATTGTACATATTGCACCATATTGTGCATCAAAATGGGCAGTTGAGGGGTTAAGCAAATCTGTAGCAAAAGAATTGCCGGAAGGAATGGCTGTTGTGACCTTAGATCCAGGCCTCATAAACACAGACATGCTCGTTTCATTTGCTGGCAGTTCAGCTTCAAAATATCTAACGCCTGAACGATGGGCTATAAAAGCAGCGACATTAATTCTTGATCTCACCACATCAGACAATGGAGCTTCCCTCACAGTTAAGGATCCAACCGAGTTGTCCAGCCCATAA MASTLSESSRIPTNASRIVLITGVSKGLGRALALELANRGHTIIGCSRDQPKLDSLRHQLSSNNHLLFNANVRSNDSVEELTKAVVQNKLVPDIIVNNAAVINRNRNLWEVDVEEFDNVIDTNVKGTANVLRHFIPLMIQNKHGIIINMSSTAGRNGIVHIAPYCASKWAVEGLSKSVAKELPEGMAVVTLDPGLINTDMLVSFAGSSASKYLTPERWAIKAATLILDLTTSDNGASLTVKDPTELSSP Homology
BLAST of CmoCh04G020080 vs. ExPASy Swiss-Prot
Match: Q9SY73 (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1g10310 PE=1 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.8e-81 Identity = 152/227 (66.96%), Postives = 185/227 (81.50%), Query Frame = 0
BLAST of CmoCh04G020080 vs. ExPASy Swiss-Prot
Match: Q5HGK2 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain COL) OX=93062 GN=fabG PE=3 SV=2) HSP 1 Score: 109.4 bits (272), Expect = 6.0e-23 Identity = 70/203 (34.48%), Postives = 115/203 (56.65%), Query Frame = 0
BLAST of CmoCh04G020080 vs. ExPASy Swiss-Prot
Match: P0A0H9 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=fabG PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.0e-23 Identity = 70/203 (34.48%), Postives = 115/203 (56.65%), Query Frame = 0
BLAST of CmoCh04G020080 vs. ExPASy Swiss-Prot
Match: P99093 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain N315) OX=158879 GN=fabG PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.0e-23 Identity = 70/203 (34.48%), Postives = 115/203 (56.65%), Query Frame = 0
BLAST of CmoCh04G020080 vs. ExPASy Swiss-Prot
Match: Q6GHK4 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=fabG PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.0e-23 Identity = 70/203 (34.48%), Postives = 115/203 (56.65%), Query Frame = 0
BLAST of CmoCh04G020080 vs. ExPASy TrEMBL
Match: A0A6J1F3V0 (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439762 PE=3 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 3.7e-132 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh04G020080 vs. ExPASy TrEMBL
Match: A0A6J1EY23 (NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439762 PE=3 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 3.7e-132 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh04G020080 vs. ExPASy TrEMBL
Match: A0A6J1JVJ6 (NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111490093 PE=3 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 2.1e-127 Identity = 239/249 (95.98%), Postives = 243/249 (97.59%), Query Frame = 0
BLAST of CmoCh04G020080 vs. ExPASy TrEMBL
Match: A0A6J1EQE4 (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436452 PE=3 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116 Identity = 221/249 (88.76%), Postives = 230/249 (92.37%), Query Frame = 0
BLAST of CmoCh04G020080 vs. ExPASy TrEMBL
Match: A0A6J1ETT9 (NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111436451 PE=3 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.8e-115 Identity = 219/249 (87.95%), Postives = 229/249 (91.97%), Query Frame = 0
BLAST of CmoCh04G020080 vs. NCBI nr
Match: XP_022933050.1 (NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 480.7 bits (1236), Expect = 7.6e-132 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh04G020080 vs. NCBI nr
Match: XP_022933051.1 (NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 480.7 bits (1236), Expect = 7.6e-132 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh04G020080 vs. NCBI nr
Match: XP_023530614.1 (NADPH-dependent pterin aldehyde reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 474.6 bits (1220), Expect = 5.4e-130 Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of CmoCh04G020080 vs. NCBI nr
Match: XP_022994347.1 (NADPH-dependent pterin aldehyde reductase-like [Cucurbita maxima]) HSP 1 Score: 464.9 bits (1195), Expect = 4.3e-127 Identity = 239/249 (95.98%), Postives = 243/249 (97.59%), Query Frame = 0
BLAST of CmoCh04G020080 vs. NCBI nr
Match: XP_023520970.1 (NADPH-dependent pterin aldehyde reductase-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 432.6 bits (1111), Expect = 2.4e-117 Identity = 223/249 (89.56%), Postives = 231/249 (92.77%), Query Frame = 0
BLAST of CmoCh04G020080 vs. TAIR 10
Match: AT1G10310.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 303.1 bits (775), Expect = 2.0e-82 Identity = 152/227 (66.96%), Postives = 185/227 (81.50%), Query Frame = 0
BLAST of CmoCh04G020080 vs. TAIR 10
Match: AT3G55290.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-14 Identity = 61/195 (31.28%), Postives = 103/195 (52.82%), Query Frame = 0
BLAST of CmoCh04G020080 vs. TAIR 10
Match: AT3G55290.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-14 Identity = 61/195 (31.28%), Postives = 103/195 (52.82%), Query Frame = 0
BLAST of CmoCh04G020080 vs. TAIR 10
Match: AT3G46170.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 3.1e-14 Identity = 61/193 (31.61%), Postives = 101/193 (52.33%), Query Frame = 0
BLAST of CmoCh04G020080 vs. TAIR 10
Match: AT3G55310.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 6.8e-14 Identity = 65/221 (29.41%), Postives = 109/221 (49.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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