CmoCh04G017880 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G017880
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	lisH domain-containing protein C1711.05 isoform X4
Location	Cmo_Chr04: 8988809 .. 8992379 (+)
RNA-Seq Expression	CmoCh04G017880
Synteny	CmoCh04G017880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGCTTCTGGTGGCTGCTCTGTGTTGTCATTCCATTCTATGGAGGTCAGCTTCTCGCATGTCAGCATGTTGCTTATGTTCACAGTGGCTGTTGCGGTCCTCATGGCTTCATCAGGACATAGACATTGGAAAATCATTAGGGAAAGCTTGTAAAAGCTCAGCCCTTCATGCCAATTAGAAATGAATCACATAATGTTGAAGCTTCTTGTACTGTTGTAGAGGAATAAGTAATGTTGGAAGAATGAATTCCATTGTTAATGACTGTAATTTGAGGAACATCTGCGCCGAAAGTTGTAGCTTCTGAAAGTCGAAACACTCGACTTCATTGGTGGATGATATCTTGAATGTAGCTATCAATCGTTCGGATGTGATTTAATAAAAGATTTGAACTTCTAAGTTCTCAGTTGAGTATTTACAGTGATATTAGTAATTCCGTTTAAGTTTAGATCATTCACATTAGTTAGACCTATAGATGAGCGATGAGACAAGATGAATTCGACTTGAAAAAGACATTTAAATTACTTAATCGAATGACTATTCTCCACTGCACCAACAAATTTTGAACTAGGAAAAAAAAACAGTAGAGGGTAGACTTTGACCAAGGTAAATGACGTGGCATTCCAGCTAGAGTGGGGAAAGGGCCGTACTAATCGTACACATCAGCATTAGTGGGCCAGCCGAAGGGAGCAGTTAAGGTTGGCGCGAAACGGAGCCATTGTTCGTTACTAATGGAAACTGAAAGCCGCGAGACTGTCGGAGCGCCTTCCATCTTTTATATTCTTTCTTCGCCCTCTCTGAAACCCTAATTTTTGGTTTCGCCCTTTTTCTTTTTCTCCGATTTGTTTTTGCTGTTTGTTTTTTTTCTTGTTTTCTCCTTCCAATGAAAGACAACGAATCTTGGAAGTCGGTTCCTGCATTGTTGTGCCTGCCGGGAACGGATTTCCGGGTATTAACGAAACTAATCTTTCTCTGTGTTCTTTTCTTTTGCCTAGATATTTTTGTTCGATGGTTCTTGCTTCTTGACGTTGATCTTTAATTTAACACAGGTTAAATCTCCATGGCTTTCGAGGATTTTTGTCGTCGGTGTCGCTTCCGGCGAGATTTAGCGGCAGTGGTTAGGTTTTGGAGTTAATTGGAACGCAAGGGGTTGCTTCTTGCGTGTTCCGATCCAAGTGAGTTTCTTATGAACTTCGGTTTTGTTTAGCTGATGATGCATGTCCATTTTAAAAAAACAACAGTGTTCATTGCTGAAAAGGGCTATGTTTCGTTAATCCTCACGTTTGTCGTTAACGATTGATTGATCGACTCCCCGTGTTTTCTCCTTCCTTTTTTCAGTTTTTTTTCCCCCGAGAAGGGAAGAACCTATTCCATTTATTCTGTTGTTTTCTTAAAAACTTATGCAGAACAGCATATTGCAAGCCATATAGTCTCTAATTATATAGCTATTGAATTGTCTAAAGGAGCAAAAGCTGCATTCATGGTTCTTATAAAAAGTCCTGTTGCTCCTGATAGAAGCCAAAGCAACTCACATTTAGAAACGGATTCAGGATCTATTGGTGGAAGTGGGAGAAAGCTTGAAACTATTGAAGAAGGCGAGAACAATAGAATATATGGCAGCGACGGGTAGATGTGAAGATACCGCTGGGGAAGGATTAGGCAGTACACATTCTGAAGATACTGCTGGGGAAGGATTTTCACTTTCCCCAACAGAGCAGCTGGCGTATGGGTCTTCATCATGTATAAACTTGTTGGAATTATCAGATCTCGTTCAAGTTGGCGAAAATGTTAACCGACCCGAAGCAGGCACAATTTTCTTGGGAAATCCCGATCATGATGTTTACCAGCTTCAATTTAAAGATGATGAGAGCGATGTTTCCAGCATTTGTTCTGCCAAATCAGAGAAGAGTAGCGGTTCTCAAGGTCCCACATCTGCATCTCAAGTTTATGATATTACCCATGAGTCTGGTGGAAATGCTATGTCTCCAACCCAATCCCCTCCTCTTCAGACAATGGATCGTGTGGGAGGATATGAATCATATGATCCGTCAAGAATTCCGTCTGCAGTTTTCCAAAGAAGTAGATCAACCACTCCATTGGAATGGAGTATTGCTTCAAATGAGTCCTTGTTTAGCATTCATGGTGGAGATGATAGTTTCTCCGGAGATAATTTGTCGATGTTGAGTGATTTAGGGAAGTCAGACGAGTTGCTTGTGTTTAACTCACCACCTGAAGTTATCACGTCAAGAGAAACTGAAATGAAGAGTGTCGAATACGAAGAGGAGCCTAAAGTGGCAGATAGCACAGAATATAACATTGAGGATAAAGAGGGTTTGGTTGCAGAAGATCTAAGTGGAAGAAACGTACTGCCTCCTGCATTATCATCGAATTCCTCTAGCAGATCTCGCCACTCTGAAAGAAGTCAATGCAGCTCAAATTCCTTCGCTTTCCCCATGTAAGTCTTTGCTCATTATCTATTTGCTAAAAAATCATTCTTGGAATTCATGTTTTCCAACTTCATGCTTACTGTCACTTCACTATGGCAACTTGTTAAAACATTAGGTTCTCGACCAAAAGGTCAGAGTTTCAAATTCTTATGCCTACTCGTTGAACTCAAAGAAGAAAAAAAAATTTGCTTGCTTTCGATTATTCTACAAAGGAACAGGCCTTCCCAGTGATACCAGTTCATAATGCCTTGGCCTTCTGCCTGCTTAATAGTCATCATGTGGTTTGCTTTTAGACTACTGTCTCTTCTCGTTTTTTCACACCTAACGAGCACAAAGATAGTCATCATGTGGTTTCTTCTTAGCCTTCTGCCTGCTTACCAGTTCAACATGCTAACTATAGCAACTGGTTAAGGCATTAAATTCTTGACCAAAAGGTAAGAGTTTGAAACTCTTTAGCCCTACCGGTTGAACTCAAAGGTGGGGGGAAAAAAAAAAGAAGAAAAAAATTGCTTTAGATTATTCTACCAAGGAATTGACCTTCCACGTGAATACCAGTTCATAATGCCTTCTCTTAGCCTTCTGCCTGCTTAATAGACATCATCTGGTTTCCTTTTAGGCTAGTATCTATTGTCGTTGTGCGTCCAAGAAGTACATTTTCTTTCAAGCTCCTTATCTTTTCTTCATGAATTTATTACAGAGATCTTAACTTACCAATTCTATGAGGTCGATGTCTCTTTGTTAGATCATTATCATCTGGAAACTACGTTGATATTGTCAAAAGAAAGTATAAGCATGAAATTAACCAGTACTCATTATCTGCAGTTTGGCCGATGAGGTGGCTCAGGATGGATCTGTGCTTGCGGATGATAAAATAGAAGGTGCTCCAGTCTCTACAAAATCTAATGCAAACTCTTGGTTTCCCTGCTGTTCATGTTCTTGTTACAAATGGAATTGCTATTCACGTTCTTGTTGCAAATGGACTTGCTGTTCATGTTCGTCTTGTTGCACATGGAACTGCTATAGTTGTAATTTTCGTCCTCACTGTCATTTTTGTCCTCGATGCCGTATTTTCTACCCTTGCCATTTTTGTCGTGGTTAAGTGGACAATGTCGCAGAAAAGACAA

mRNA sequence

ATGATAGCTTCTGGTGGCTGCTCTGTGTTGTCATTCCATTCTATGGAGGTCAGCTTCTCGCATGTCAGCATGTTGCTTATGTTCACAGTGGCTGTTGCGGTCCTCATGGCTTCATCAGGACATAGACATTGGAAAATCATTAGGGAAAGCTTGTTAAATCTCCATGGCTTTCGAGGATTTTTGTCGTCGGTGTCGCTTCCGGCGAGATTTAGCGGCAGTGAACAGCATATTGCAAGCCATATAGTCTCTAATTATATAGCTATTGAATTGTCTAAAGGAGCAAAAGCTGCATTCATGGATCTATTGGTGGAAGTGGGAGAAAGCTTGAAACTATTGAAGAAGGCGAGAACAATAGAATATATGGCAGCGACGGGTAGATGTGAAGATACCGCTGGGGAAGGATTAGGCAGTACACATTCTGAAGATACTGCTGGGGAAGGATTTTCACTTTCCCCAACAGAGCAGCTGGCGTATGGGTCTTCATCATGTATAAACTTGTTGGAATTATCAGATCTCGTTCAAGTTGGCGAAAATGTTAACCGACCCGAAGCAGGCACAATTTTCTTGGGAAATCCCGATCATGATGTTTACCAGCTTCAATTTAAAGATGATGAGAGCGATGTTTCCAGCATTTGTTCTGCCAAATCAGAGAAGAGTAGCGGTTCTCAAGGTCCCACATCTGCATCTCAAGTTTATGATATTACCCATGAGTCTGGTGGAAATGCTATGTCTCCAACCCAATCCCCTCCTCTTCAGACAATGGATCGTGTGGGAGGATATGAATCATATGATCCGTCAAGAATTCCGTCTGCAGTTTTCCAAAGAAGTAGATCAACCACTCCATTGGAATGGAGTATTGCTTCAAATGAGTCCTTGTTTAGCATTCATGGTGGAGATGATAGTTTCTCCGGAGATAATTTGTCGATGTTGAGTGATTTAGGGAAGTCAGACGAGTTGCTTGTGTTTAACTCACCACCTGAAGTTATCACGTCAAGAGAAACTGAAATGAAGAGTGTCGAATACGAAGAGGAGCCTAAAGTGGCAGATAGCACAGAATATAACATTGAGGATAAAGAGGGTTTGGTTGCAGAAGATCTAAGTGGAAGAAACGTACTGCCTCCTGCATTATCATCGAATTCCTCTAGCAGATCTCGCCACTCTGAAAGAAGTCAATGCAGCTCAAATTCCTTCGCTTTCCCCATTTTGGCCGATGAGGTGGCTCAGGATGGATCTTCTCTACAAAATCTAATGCAAACTCTTGGTTTCCCTGCTGTTCATGTTCTTGTTACAAATGGAATTGCTATTCACGTTCTTGTTGCAAATGGACTTGCTGTTCATGTTCGTCTTGTTGCACATGGAACTGCTATAGTTGTAATTTTCGTCCTCACTGTCATTTTTGTCCTCGATGCCGTATTTTCTACCCTTGCCATTTTTGTCGTGGTTAAGTGGACAATGTCGCAGAAAAGACAA

Coding sequence (CDS)

ATGATAGCTTCTGGTGGCTGCTCTGTGTTGTCATTCCATTCTATGGAGGTCAGCTTCTCGCATGTCAGCATGTTGCTTATGTTCACAGTGGCTGTTGCGGTCCTCATGGCTTCATCAGGACATAGACATTGGAAAATCATTAGGGAAAGCTTGTTAAATCTCCATGGCTTTCGAGGATTTTTGTCGTCGGTGTCGCTTCCGGCGAGATTTAGCGGCAGTGAACAGCATATTGCAAGCCATATAGTCTCTAATTATATAGCTATTGAATTGTCTAAAGGAGCAAAAGCTGCATTCATGGATCTATTGGTGGAAGTGGGAGAAAGCTTGAAACTATTGAAGAAGGCGAGAACAATAGAATATATGGCAGCGACGGGTAGATGTGAAGATACCGCTGGGGAAGGATTAGGCAGTACACATTCTGAAGATACTGCTGGGGAAGGATTTTCACTTTCCCCAACAGAGCAGCTGGCGTATGGGTCTTCATCATGTATAAACTTGTTGGAATTATCAGATCTCGTTCAAGTTGGCGAAAATGTTAACCGACCCGAAGCAGGCACAATTTTCTTGGGAAATCCCGATCATGATGTTTACCAGCTTCAATTTAAAGATGATGAGAGCGATGTTTCCAGCATTTGTTCTGCCAAATCAGAGAAGAGTAGCGGTTCTCAAGGTCCCACATCTGCATCTCAAGTTTATGATATTACCCATGAGTCTGGTGGAAATGCTATGTCTCCAACCCAATCCCCTCCTCTTCAGACAATGGATCGTGTGGGAGGATATGAATCATATGATCCGTCAAGAATTCCGTCTGCAGTTTTCCAAAGAAGTAGATCAACCACTCCATTGGAATGGAGTATTGCTTCAAATGAGTCCTTGTTTAGCATTCATGGTGGAGATGATAGTTTCTCCGGAGATAATTTGTCGATGTTGAGTGATTTAGGGAAGTCAGACGAGTTGCTTGTGTTTAACTCACCACCTGAAGTTATCACGTCAAGAGAAACTGAAATGAAGAGTGTCGAATACGAAGAGGAGCCTAAAGTGGCAGATAGCACAGAATATAACATTGAGGATAAAGAGGGTTTGGTTGCAGAAGATCTAAGTGGAAGAAACGTACTGCCTCCTGCATTATCATCGAATTCCTCTAGCAGATCTCGCCACTCTGAAAGAAGTCAATGCAGCTCAAATTCCTTCGCTTTCCCCATTTTGGCCGATGAGGTGGCTCAGGATGGATCTTCTCTACAAAATCTAATGCAAACTCTTGGTTTCCCTGCTGTTCATGTTCTTGTTACAAATGGAATTGCTATTCACGTTCTTGTTGCAAATGGACTTGCTGTTCATGTTCGTCTTGTTGCACATGGAACTGCTATAGTTGTAATTTTCGTCCTCACTGTCATTTTTGTCCTCGATGCCGTATTTTCTACCCTTGCCATTTTTGTCGTGGTTAAGTGGACAATGTCGCAGAAAAGACAA

Protein sequence

MIASGGCSVLSFHSMEVSFSHVSMLLMFTVAVAVLMASSGHRHWKIIRESLLNLHGFRGFLSSVSLPARFSGSEQHIASHIVSNYIAIELSKGAKAAFMDLLVEVGESLKLLKKARTIEYMAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLVQVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYDITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGSSLQNLMQTLGFPAVHVLVTNGIAIHVLVANGLAVHVRLVAHGTAIVVIFVLTVIFVLDAVFSTLAIFVVVKWTMSQKRQ

Homology

[Close]

BLAST of CmoCh04G017880 vs. ExPASy TrEMBL
Match: A0A6J1GYP0 (uncharacterized protein LOC111458373 OS=Cucurbita moschata OX=3662 GN=LOC111458373 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 9.3e-156
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 0


Query: 121 MAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLVQVGENVN 180
           MAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLVQVGENVN
Sbjct: 1   MAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLVQVGENVN 60

Query: 181 RPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYDITHESGG 240
           RPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYDITHESGG
Sbjct: 61  RPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYDITHESGG 120

Query: 241 NAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDD 300
           NAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDD
Sbjct: 121 NAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDD 180

Query: 301 SFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKEG 360
           SFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKEG
Sbjct: 181 SFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKEG 240

Query: 361 LVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGSSL 414
           LVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGS L
Sbjct: 241 LVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGSVL 293

[Close]

BLAST of CmoCh04G017880 vs. ExPASy TrEMBL
Match: A0A6J1IL15 (uncharacterized protein LOC111478406 OS=Cucurbita maxima OX=3661 GN=LOC111478406 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 1.1e-140
Identity = 271/300 (90.33%), Postives = 278/300 (92.67%), Query Frame = 0


Query: 121 MAATGRCEDTAGE-------GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 180
           MAATGRCE ++         GLGSTHSEDTAGEGFSLSPT QLAYGSSSCINL+ELSDLV
Sbjct: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTGQLAYGSSSCINLMELSDLV 60

Query: 181 QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 240
           QV ENVNRPE GTI LGNPDHDVYQLQFKDDESDVSS+CSAKSEKSSGSQGPTSASQV D
Sbjct: 61  QVDENVNRPEGGTICLGNPDHDVYQLQFKDDESDVSSLCSAKSEKSSGSQGPTSASQVSD 120

Query: 241 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF 300
           ITHESGGN MSPTQSPPLQTMDRVGGYE YDP RIPSAVFQRSRSTTPLEWSIASNESLF
Sbjct: 121 ITHESGGNVMSPTQSPPLQTMDRVGGYEPYDPLRIPSAVFQRSRSTTPLEWSIASNESLF 180

Query: 301 SIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEY 360
           SIHGGDDSFSGDNLSMLSDLGKSDELLVFNS P VITSRETEMKSVEYEEEPKVAD+TEY
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGKSDELLVFNSAPAVITSRETEMKSVEYEEEPKVADTTEY 240

Query: 361 NIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGSSL 414
           NIED+EGLVAEDLSGRNVLPPALSS+SSSRSRHSERSQCSSNSFAFPILADE AQDGS L
Sbjct: 241 NIEDREGLVAEDLSGRNVLPPALSSSSSSRSRHSERSQCSSNSFAFPILADEEAQDGSVL 300

[Close]

BLAST of CmoCh04G017880 vs. ExPASy TrEMBL
Match: A0A1S4DW25 (uncharacterized protein LOC103489558 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489558 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 5.0e-93
Identity = 203/312 (65.06%), Postives = 237/312 (75.96%), Query Frame = 0


Query: 121 MAATG---RCEDTAGE----GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 180
           MAA G   R   T G+    GLGS +S  T G+G SL PT+QL +GS+S I+LLE+SDL 
Sbjct: 1   MAARGSRERSSHTTGQPDIIGLGSINSGGTGGKGVSLPPTKQLGFGSASSIDLLEISDLA 60

Query: 181 QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 240
           QVG NVNRPEA TI L NP   +YQLQFKDD+S+VSS CS+KSEKSSGS  PTS SQV  
Sbjct: 61  QVGANVNRPEADTICLANPGRGIYQLQFKDDDSNVSSNCSSKSEKSSGSPCPTSVSQVSG 120

Query: 241 ITHESGGNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQRSRSTTPLEWSIASNESL 300
           +THESGGN +SPTQSP LQTMDR+GGY ESYDP RIPSAVFQRS S TP+EWSIASNESL
Sbjct: 121 LTHESGGNVLSPTQSPSLQTMDRMGGYDESYDPFRIPSAVFQRSSSVTPMEWSIASNESL 180

Query: 301 FSIHGGDDSFSGDNLSMLSDLGKS------------DELLVFNSPPEVITSRETEMKSVE 360
           FSI  G++SFS D++SMLS+ GKS            DE  VF+ PP VITSRE EMKS E
Sbjct: 181 FSIQVGNNSFSRDHVSMLSEFGKSGELTKSGKFKKADESFVFSQPPAVITSREAEMKSAE 240

Query: 361 YEEEPKVADSTEYNIEDKEGLVA-EDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAF 412
           YEE PK+AD+ EYNI+DK G +  +DLS RN+ PPA+S NSS++SRHS++SQ SS+SFAF
Sbjct: 241 YEEGPKMADTIEYNIKDKGGSITDDDLSDRNLPPPAVSWNSSTKSRHSDKSQSSSDSFAF 300

[Close]

BLAST of CmoCh04G017880 vs. ExPASy TrEMBL
Match: A0A1S4DW26 (uncharacterized protein LOC103489558 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489558 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.2e-89
Identity = 196/302 (64.90%), Postives = 230/302 (76.16%), Query Frame = 0


Query: 121 MAATG---RCEDTAGE----GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 180
           MAA G   R   T G+    GLGS +S  T G+G SL PT+QL +GS+S I+LLE+SDL 
Sbjct: 1   MAARGSRERSSHTTGQPDIIGLGSINSGGTGGKGVSLPPTKQLGFGSASSIDLLEISDLA 60

Query: 181 QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 240
           QVG NVNRPEA TI L NP   +YQLQFKDD+S+VSS CS+KSEKSSGS  PTS SQV  
Sbjct: 61  QVGANVNRPEADTICLANPGRGIYQLQFKDDDSNVSSNCSSKSEKSSGSPCPTSVSQVSG 120

Query: 241 ITHESGGNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQRSRSTTPLEWSIASNESL 300
           +THESGGN +SPTQSP LQTMDR+GGY ESYDP RIPSAVFQRS S TP+EWSIASNESL
Sbjct: 121 LTHESGGNVLSPTQSPSLQTMDRMGGYDESYDPFRIPSAVFQRSSSVTPMEWSIASNESL 180

Query: 301 FSIHGGDDSFSGDNLSMLSDLGKS------------DELLVFNSPPEVITSRETEMKSVE 360
           FSI  G++SFS D++SMLS+ GKS            DE  VF+ PP VITSRE EMKS E
Sbjct: 181 FSIQVGNNSFSRDHVSMLSEFGKSGELTKSGKFKKADESFVFSQPPAVITSREAEMKSAE 240

Query: 361 YEEEPKVADSTEYNIEDKEGLVA-EDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAF 402
           YEE PK+AD+ EYNI+DK G +  +DLS RN+ PPA+S NSS++SRHS++SQ SS+SFAF
Sbjct: 241 YEEGPKMADTIEYNIKDKGGSITDDDLSDRNLPPPAVSWNSSTKSRHSDKSQSSSDSFAF 300

[Close]

BLAST of CmoCh04G017880 vs. ExPASy TrEMBL
Match: A0A5A7STD6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00130 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.2e-89
Identity = 196/302 (64.90%), Postives = 230/302 (76.16%), Query Frame = 0


Query: 121 MAATG---RCEDTAGE----GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 180
           MAA G   R   T G+    GLGS +S  T G+G SL PT+QL +GS+S I+LLE+SDL 
Sbjct: 1   MAARGSRERSSHTTGQPDIIGLGSINSGGTGGKGVSLPPTKQLGFGSASSIDLLEISDLA 60

Query: 181 QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 240
           QVG NVNRPEA TI L NP   +YQLQFKDD+S+VSS CS+KSEKSSGS  PTS SQV  
Sbjct: 61  QVGANVNRPEADTICLANPGRGIYQLQFKDDDSNVSSNCSSKSEKSSGSPCPTSVSQVSG 120

Query: 241 ITHESGGNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQRSRSTTPLEWSIASNESL 300
           +THESGGN +SPTQSP LQTMDR+GGY ESYDP RIPSAVFQRS S TP+EWSIASNESL
Sbjct: 121 LTHESGGNVLSPTQSPSLQTMDRMGGYDESYDPFRIPSAVFQRSSSVTPMEWSIASNESL 180

Query: 301 FSIHGGDDSFSGDNLSMLSDLGKS------------DELLVFNSPPEVITSRETEMKSVE 360
           FSI  G++SFS D++SMLS+ GKS            DE  VF+ PP VITSRE EMKS E
Sbjct: 181 FSIQVGNNSFSRDHVSMLSEFGKSGELTKSGKFKKADESFVFSQPPAVITSREAEMKSAE 240

Query: 361 YEEEPKVADSTEYNIEDKEGLVA-EDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAF 402
           YEE PK+AD+ EYNI+DK G +  +DLS RN+ PPA+S NSS++SRHS++SQ SS+SFAF
Sbjct: 241 YEEGPKMADTIEYNIKDKGGSITDDDLSDRNLPPPAVSWNSSTKSRHSDKSQSSSDSFAF 300

[Close]

BLAST of CmoCh04G017880 vs. NCBI nr
Match: KAG7032255.1 (hypothetical protein SDJN02_06299, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 599.7 bits (1545), Expect = 2.2e-167
Identity = 314/316 (99.37%), Postives = 314/316 (99.37%), Query Frame = 0


Query: 98  FMDLLVEVGESLKLLKKARTIEYMAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLA 157
           F DLLVEVGESLKLLKKARTIEYMAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLA
Sbjct: 21  FRDLLVEVGESLKLLKKARTIEYMAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLA 80

Query: 158 YGSSSCINLLELSDLVQVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSE 217
           YGSSSCINLLELSDLVQVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSE
Sbjct: 81  YGSSSCINLLELSDLVQVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSE 140

Query: 218 KSSGSQGPTSASQVYDITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSR 277
           KSSGSQGPTSASQVYDITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSR
Sbjct: 141 KSSGSQGPTSASQVYDITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSR 200

Query: 278 STTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMK 337
           STTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMK
Sbjct: 201 STTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMK 260

Query: 338 SVEYEEEPKVADSTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSF 397
           SVEYEEEPKVADSTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSF
Sbjct: 261 SVEYEEEPKVADSTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSF 320

Query: 398 AFPILADEVAQDGSSL 414
           AFPILADEVAQDGS L
Sbjct: 321 AFPILADEVAQDGSVL 336

[Close]

BLAST of CmoCh04G017880 vs. NCBI nr
Match: KAG6601476.1 (hypothetical protein SDJN03_06709, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 564.7 bits (1454), Expect = 7.8e-157
Identity = 317/377 (84.08%), Postives = 322/377 (85.41%), Query Frame = 0


Query: 121 MAATGRCEDTAGE-------GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 180
           MAATGRCE ++         GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV
Sbjct: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60

Query: 181 QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 240
           QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSS  SAKSEKSSGSQGPTSASQVYD
Sbjct: 61  QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSNGSAKSEKSSGSQGPTSASQVYD 120

Query: 241 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF 300
           ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF
Sbjct: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF 180

Query: 301 SIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEY 360
           SIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEY
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEY 240

Query: 361 NIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGSSL 420
           NIEDKEGLVAED SGRNVLPPALSSNSSSRSRHSERSQCSSNSF+FPILADEVAQDGS  
Sbjct: 241 NIEDKEGLVAEDPSGRNVLPPALSSNSSSRSRHSERSQCSSNSFSFPILADEVAQDGS-- 300

Query: 421 QNLMQTLGFPAVHVLVTNGIAIHVLVANGLAVHVRLVAHGTAIVVIFVLTVIFVLDAVFS 480
                                              ++A     VVIFVLTVIFVLDAVFS
Sbjct: 301 -----------------------------------VLADDKIEVVIFVLTVIFVLDAVFS 340

Query: 481 TLAIFVVVKWTMSQKRQ 491
           TLAIFVVVKWTMSQKRQ
Sbjct: 361 TLAIFVVVKWTMSQKRQ 340

[Close]

BLAST of CmoCh04G017880 vs. NCBI nr
Match: XP_022956763.1 (uncharacterized protein LOC111458373 [Cucurbita moschata] >XP_022956764.1 uncharacterized protein LOC111458373 [Cucurbita moschata] >XP_022956765.1 uncharacterized protein LOC111458373 [Cucurbita moschata] >XP_022956767.1 uncharacterized protein LOC111458373 [Cucurbita moschata])

HSP 1 Score: 560.1 bits (1442), Expect = 1.9e-155
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 0


Query: 121 MAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLVQVGENVN 180
           MAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLVQVGENVN
Sbjct: 1   MAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLVQVGENVN 60

Query: 181 RPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYDITHESGG 240
           RPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYDITHESGG
Sbjct: 61  RPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYDITHESGG 120

Query: 241 NAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDD 300
           NAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDD
Sbjct: 121 NAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDD 180

Query: 301 SFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKEG 360
           SFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKEG
Sbjct: 181 SFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKEG 240

Query: 361 LVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGSSL 414
           LVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGS L
Sbjct: 241 LVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGSVL 293

[Close]

BLAST of CmoCh04G017880 vs. NCBI nr
Match: XP_023530940.1 (uncharacterized protein LOC111793332 [Cucurbita pepo subsp. pepo] >XP_023530948.1 uncharacterized protein LOC111793332 [Cucurbita pepo subsp. pepo] >XP_023530956.1 uncharacterized protein LOC111793332 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.1 bits (1333), Expect = 8.4e-143
Identity = 282/324 (87.04%), Postives = 286/324 (88.27%), Query Frame = 0


Query: 121 MAATGRCEDTAGE-------GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 180
           MAATGRCE ++         GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV
Sbjct: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60

Query: 181 QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 240
           QV ENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD
Sbjct: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120

Query: 241 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF 300
           ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRS+TPLEWSIASNESLF
Sbjct: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF 180

Query: 301 SIHGGDDSFSGDNLSMLSDLG------------------------KSDELLVFNSPPEVI 360
           SIHGGDDSFSGDNLSMLSDLG                        KSDELLVFNSPP VI
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI 240

Query: 361 TSRETEMKSVEYEEEPKVADSTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 414
           TSRETEMKSVEYEEEPKVAD+TEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER
Sbjct: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 300

[Close]

BLAST of CmoCh04G017880 vs. NCBI nr
Match: XP_022978412.1 (uncharacterized protein LOC111478406 [Cucurbita maxima] >XP_022978421.1 uncharacterized protein LOC111478406 [Cucurbita maxima] >XP_022978430.1 uncharacterized protein LOC111478406 [Cucurbita maxima])

HSP 1 Score: 510.0 bits (1312), Expect = 2.3e-140
Identity = 271/300 (90.33%), Postives = 278/300 (92.67%), Query Frame = 0


Query: 121 MAATGRCEDTAGE-------GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 180
           MAATGRCE ++         GLGSTHSEDTAGEGFSLSPT QLAYGSSSCINL+ELSDLV
Sbjct: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTGQLAYGSSSCINLMELSDLV 60

Query: 181 QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 240
           QV ENVNRPE GTI LGNPDHDVYQLQFKDDESDVSS+CSAKSEKSSGSQGPTSASQV D
Sbjct: 61  QVDENVNRPEGGTICLGNPDHDVYQLQFKDDESDVSSLCSAKSEKSSGSQGPTSASQVSD 120

Query: 241 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF 300
           ITHESGGN MSPTQSPPLQTMDRVGGYE YDP RIPSAVFQRSRSTTPLEWSIASNESLF
Sbjct: 121 ITHESGGNVMSPTQSPPLQTMDRVGGYEPYDPLRIPSAVFQRSRSTTPLEWSIASNESLF 180

Query: 301 SIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEY 360
           SIHGGDDSFSGDNLSMLSDLGKSDELLVFNS P VITSRETEMKSVEYEEEPKVAD+TEY
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGKSDELLVFNSAPAVITSRETEMKSVEYEEEPKVADTTEY 240

Query: 361 NIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGSSL 414
           NIED+EGLVAEDLSGRNVLPPALSS+SSSRSRHSERSQCSSNSFAFPILADE AQDGS L
Sbjct: 241 NIEDREGLVAEDLSGRNVLPPALSSSSSSRSRHSERSQCSSNSFAFPILADEEAQDGSVL 300

[Close]

BLAST of CmoCh04G017880 vs. TAIR 10
Match: AT2G03630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 5.8e-17
Identity = 80/228 (35.09%), Postives = 117/228 (51.32%), Query Frame = 0


Query: 190 GNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVY-----DITHESGGNAMS 249
           G+ +H    LQ    E++   I S    + S S   +S+S  Y     D+  E    +++
Sbjct: 30  GDVEHKTIPLQ----ETETVIINSESHSRLSSSSSSSSSSSSYLSPPKDLPEEVLKESLN 89

Query: 250 PTQ--SPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDDSF 309
             +  SPP+Q MDR      YDP+RIPS+VF+RS+S  P EWS  SNESLFSIH G++SF
Sbjct: 90  DPEISSPPVQVMDR-DNNGKYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSF 149

Query: 310 S--GDNLSMLSDLGKSDELLVFNS--PPEVITSRE-----TEMKSVEYEEEPKVADSTEY 369
           +  G +L    +L KS ELL ++   P   +   E      E K VE ++E KV    E 
Sbjct: 150 TGYGGDLMKSGELYKSGELLAYSPGLPMPPVPGSEPKPVVEEPKVVESDKEEKVVLVEET 209

Query: 370 NIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPI 402
           +    +    +  S      PA+S  + + S  S RS  S++SF+FP+
Sbjct: 210 HTSSSDEEEGKRESHEKEQHPAVSWKTPTTSYRSNRSSNSAHSFSFPM 252

[Close]

BLAST of CmoCh04G017880 vs. TAIR 10
Match: AT2G03630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 7.1e-15
Identity = 66/170 (38.82%), Postives = 93/170 (54.71%), Query Frame = 0


Query: 190 GNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVY-----DITHESGGNAMS 249
           G+ +H    LQ    E++   I S    + S S   +S+S  Y     D+  E    +++
Sbjct: 30  GDVEHKTIPLQ----ETETVIINSESHSRLSSSSSSSSSSSSYLSPPKDLPEEVLKESLN 89

Query: 250 PTQ--SPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDDSF 309
             +  SPP+Q MDR      YDP+RIPS+VF+RS+S  P EWS  SNESLFSIH G++SF
Sbjct: 90  DPEISSPPVQVMDR-DNNGKYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSF 149

Query: 310 S--GDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADS 351
           +  G +L    +L KS ELL ++    +     +E K V   EEPKV +S
Sbjct: 150 TGYGGDLMKSGELYKSGELLAYSPGLPMPPVPGSEPKPV--VEEPKVVES 192

[Close]

BLAST of CmoCh04G017880 vs. TAIR 10
Match: AT3G02125.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 3.8e-08
Identity = 61/182 (33.52%), Postives = 88/182 (48.35%), Query Frame = 0


Query: 263 YDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDE---- 322
           YDP+RIPS+VF  S+     EWS+ASNESLFSIH  D +FS      L+++ + +E    
Sbjct: 89  YDPTRIPSSVFS-SKPGNSTEWSLASNESLFSIH--DGNFSISTALRLAEIPRFEETVHV 148

Query: 323 LLVFNS---PPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKEG--------------- 382
           +   NS   PP V    E E +++  E+EP   +++  +IED E                
Sbjct: 149 ITEINSVPLPPPVKKPNEYEKETIA-EKEPYQVENSNSDIEDNEEEEKMSEVESDDEHEE 208

Query: 383 -----LVAEDLSGRNVLPP----------ALSSNSSSRSRHSERSQCSSNSFAFPILADE 408
                + AE L  + V+            ++ S+S S S  S+ S  S  SFAFP+L  E
Sbjct: 209 EQTDMIEAEALVEKEVIETVKENKPEDSNSIVSHSPSISCRSDTSNNSIGSFAFPLLQKE 266

[Close]

BLAST of CmoCh04G017880 vs. TAIR 10
Match: AT1G74220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast hits to 347 proteins in 86 species: Archae - 0; Bacteria - 17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-07
Identity = 75/233 (32.19%), Postives = 101/233 (43.35%), Query Frame = 0


Query: 216 SEKSSGSQGPTSASQVYDITHESGGNAMSPTQSPPLQTMDR--------VGGYESYDPSR 275
           S  SS S     A    D  H    N  +  QSPP Q M+R             +  P R
Sbjct: 34  SSSSSSSCSSIEAEPRPDQNH----NHNNVEQSPPTQVMERSTNNTTTTTTSTPNTPPYR 93

Query: 276 IPSAVFQRSRSTTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPE 335
           IPS VF R+ ST P EWS  SNESLFSIH G++SF+G       D  KS E L F  PP 
Sbjct: 94  IPSHVFARTTSTAP-EWSTISNESLFSIHMGNNSFTG------GDYFKSGE-LTFPQPPS 153

Query: 336 VITS--------------------RETEMKSVEYEEEPKVADSTEYNIEDKEGLVAEDLS 395
            ITS                       E+K+   +   K A++ +     KE       S
Sbjct: 154 PITSPLPSPLPSTPHNVNQGGAVGAAAEVKT-PVDIGKKAAETDKAYRASKEDEQKAAAS 213

Query: 396 GRNVLPPALSSNSSSRSRHSERS------QCSSNSFAFPIL--ADEVAQDGSS 413
            R V+    ++N+++++   +RS        S  SFAFP++  AD+    GS+
Sbjct: 214 IREVIMANEAANNNNKTNKLDRSVSRRSENLSVKSFAFPVMGNADKGGLQGST 253

[Close]

BLAST of CmoCh04G017880 vs. TAIR 10
Match: AT5G39200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39140.1); Has 65 Blast hits to 65 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 4.2e-07
Identity = 59/156 (37.82%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 263 YDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELLVF 322
           Y+P RIP +VF  S  T   EWSI SNESLFSIH GD SF        S + KS EL  F
Sbjct: 9   YEPDRIPHSVFATS-VTPKQEWSIQSNESLFSIHMGDHSF--------SKMYKSGELTNF 68

Query: 323 NSPPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKE-GLVAEDLSG-RNVLPPALSSN- 382
                   S      +++ +  P  A + E NI   E G    +  G  NV  P      
Sbjct: 69  EYTASPYISYYN--NNIDNKIAPTDAGTKEVNITMVETGPKTGNRDGLTNVPKPDPRQQI 128

Query: 383 --SSSRSRHSERSQCSSNSFAFPILADEVAQDGSSL 414
             S ++S HSE S  S+ SFAFP L +   +  +SL
Sbjct: 129 PISPTKSCHSETSNNSTTSFAFPTLGEYQQERKTSL 153

The following BLAST results are available for this feature:

BLAST of CmoCh04G017880 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G017880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYP0	9.3e-156	99.66	uncharacterized protein LOC111458373 OS=Cucurbita moschata OX=3662 GN=LOC1114583...	[more]
A0A6J1IL15	1.1e-140	90.33	uncharacterized protein LOC111478406 OS=Cucurbita maxima OX=3661 GN=LOC111478406...	[more]
A0A1S4DW25	5.0e-93	65.06	uncharacterized protein LOC103489558 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DW26	1.2e-89	64.90	uncharacterized protein LOC103489558 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7STD6	1.2e-89	64.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmoCh04G017880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032255.1	2.2e-167	99.37	hypothetical protein SDJN02_06299, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6601476.1	7.8e-157	84.08	hypothetical protein SDJN03_06709, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022956763.1	1.9e-155	99.66	uncharacterized protein LOC111458373 [Cucurbita moschata] >XP_022956764.1 unchar...	[more]
XP_023530940.1	8.4e-143	87.04	uncharacterized protein LOC111793332 [Cucurbita pepo subsp. pepo] >XP_023530948....	[more]
XP_022978412.1	2.3e-140	90.33	uncharacterized protein LOC111478406 [Cucurbita maxima] >XP_022978421.1 uncharac...	[more]

BLAST of CmoCh04G017880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03630.1	5.8e-17	35.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G03630.2	7.1e-15	38.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02125.1	3.8e-08	33.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G74220.1	1.1e-07	32.19	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G39200.1	4.2e-07	37.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..229
None	No IPR available	PANTHER	PTHR33673:SF27	SUBFAMILY NOT NAMED	coord: 134..411
None	No IPR available	PANTHER	PTHR33673	SUPPRESSOR SRP40-LIKE PROTEIN	coord: 134..411

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G017880.1	CmoCh04G017880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane