CmoCh04G015440 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G015440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	sarcoplasmic reticulum histidine-rich calcium-binding protein
Location	Cmo_Chr04: 7901626 .. 7902477 (+)
RNA-Seq Expression	CmoCh04G015440
Synteny	CmoCh04G015440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACCAAGAAATTCATCCAATTGGTTGAGGAGAAGAAGAGGAGAGCTTTGGAGAAGAAGGAAGCCCCATTGAAATGGGAACAAAGACTTGAAGCTGCTGCTAAGGCAGAGGCTGCTGAAGCCAAAGCAAGGAAGCTTAAAGCTGCCAAGCATAAAAGAAGATCAGTATCAGATTCTGATACTGATACAGAAAGTGATAGCCATGAGCGAGGAAGGAAAGCAGGTAAGAGAACTCATAAGAAACACAGGAGACATAGCCACTCTGATTCAGGTGACAGTGAGAAGAGGAAAGATAGAAGATCTAAGAGAAAGCTGAAACGACATCAATCATCTCACGATGACAGCAGTGATGAATTTGATGGACACTCTGATGAAGGTAGGAGGAAGAAGAGAAACCATAGAAGACATGCGCATGACAATTCAAGTTCTGATGAAAGTTACTCTAGTTCTAGTGATGATGATGTTGAGACAAGAAAAAGATGTCGTTCCAGGCATAACAGACATCATAGACATATTGGCTATTCATCATCTGATGATTCTAGCAGTGAGAATAATAATCGAAGGGAAAAGCGTGGAAGGCATCGTCAACACGAGCAGTCCCATCGATCATGTAGTATTGATTCATTAGATTGTAATCACTGGAGGTGTGATGCTAGAAGCCAGGCCTCAGGGAGGTTATCTGATGCTGATCGTGAAGATTCAGCATTACAATACAGGCACAAGAGTAGCCACCCTAACAAACACCGGCACCATCACTCAGGTGCCGGTGGTTTGACCCAGATCGATGAAGAACATGCTGACAATAACTCTGATGGAAATAACCATGGTCGTGCTAAGGATTCTCATTAA

mRNA sequence

ATGGACACCAAGAAATTCATCCAATTGGTTGAGGAGAAGAAGAGGAGAGCTTTGGAGAAGAAGGAAGCCCCATTGAAATGGGAACAAAGACTTGAAGCTGCTGCTAAGGCAGAGGCTGCTGAAGCCAAAGCAAGGAAGCTTAAAGCTGCCAAGCATAAAAGAAGATCAGTATCAGATTCTGATACTGATACAGAAAGTGATAGCCATGAGCGAGGAAGGAAAGCAGGTAAGAGAACTCATAAGAAACACAGGAGACATAGCCACTCTGATTCAGGTGACAGTGAGAAGAGGAAAGATAGAAGATCTAAGAGAAAGCTGAAACGACATCAATCATCTCACGATGACAGCAGTGATGAATTTGATGGACACTCTGATGAAGGTAGGAGGAAGAAGAGAAACCATAGAAGACATGCGCATGACAATTCAAGTTCTGATGAAAGTTACTCTAGTTCTAGTGATGATGATGTTGAGACAAGAAAAAGATGTCGTTCCAGGCATAACAGACATCATAGACATATTGGCTATTCATCATCTGATGATTCTAGCAGTGAGAATAATAATCGAAGGGAAAAGCGTGGAAGGCATCGTCAACACGAGCAGTCCCATCGATCATGTAGTATTGATTCATTAGATTGTAATCACTGGAGGTGTGATGCTAGAAGCCAGGCCTCAGGGAGGTTATCTGATGCTGATCGTGAAGATTCAGCATTACAATACAGGCACAAGAGTAGCCACCCTAACAAACACCGGCACCATCACTCAGGTGCCGGTGGTTTGACCCAGATCGATGAAGAACATGCTGACAATAACTCTGATGGAAATAACCATGGTCGTGCTAAGGATTCTCATTAA

Coding sequence (CDS)

ATGGACACCAAGAAATTCATCCAATTGGTTGAGGAGAAGAAGAGGAGAGCTTTGGAGAAGAAGGAAGCCCCATTGAAATGGGAACAAAGACTTGAAGCTGCTGCTAAGGCAGAGGCTGCTGAAGCCAAAGCAAGGAAGCTTAAAGCTGCCAAGCATAAAAGAAGATCAGTATCAGATTCTGATACTGATACAGAAAGTGATAGCCATGAGCGAGGAAGGAAAGCAGGTAAGAGAACTCATAAGAAACACAGGAGACATAGCCACTCTGATTCAGGTGACAGTGAGAAGAGGAAAGATAGAAGATCTAAGAGAAAGCTGAAACGACATCAATCATCTCACGATGACAGCAGTGATGAATTTGATGGACACTCTGATGAAGGTAGGAGGAAGAAGAGAAACCATAGAAGACATGCGCATGACAATTCAAGTTCTGATGAAAGTTACTCTAGTTCTAGTGATGATGATGTTGAGACAAGAAAAAGATGTCGTTCCAGGCATAACAGACATCATAGACATATTGGCTATTCATCATCTGATGATTCTAGCAGTGAGAATAATAATCGAAGGGAAAAGCGTGGAAGGCATCGTCAACACGAGCAGTCCCATCGATCATGTAGTATTGATTCATTAGATTGTAATCACTGGAGGTGTGATGCTAGAAGCCAGGCCTCAGGGAGGTTATCTGATGCTGATCGTGAAGATTCAGCATTACAATACAGGCACAAGAGTAGCCACCCTAACAAACACCGGCACCATCACTCAGGTGCCGGTGGTTTGACCCAGATCGATGAAGAACATGCTGACAATAACTCTGATGGAAATAACCATGGTCGTGCTAAGGATTCTCATTAA

Protein sequence

MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDSDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEFDGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH

Homology

[Close]

BLAST of CmoCh04G015440 vs. ExPASy TrEMBL
Match: A0A6J1GZG1 (CAX-interacting protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111458543 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.2e-144
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS 60
           MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS
Sbjct: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS 60

Query: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120
           DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF
Sbjct: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120

Query: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD 180
           DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD
Sbjct: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD 180

Query: 181 SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYR 240
           SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYR
Sbjct: 181 SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYR 240

Query: 241 HKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH 284
           HKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH
Sbjct: 241 HKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH 283

[Close]

BLAST of CmoCh04G015440 vs. ExPASy TrEMBL
Match: A0A6J1J292 (sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111482679 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.2e-125
Identity = 258/283 (91.17%), Postives = 269/283 (95.05%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQRLEAA+KAEAAEAKARKLKAAKHKRRSVS+S
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQRLEAASKAEAAEAKARKLKAAKHKRRSVSNS 60

Query: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120
           DTD+ESDSHERGRKAGKRTHKKHRRHSHSDSGDS K+K+ RSK+KLKR +SSHDDSSDEF
Sbjct: 61  DTDSESDSHERGRKAGKRTHKKHRRHSHSDSGDS-KKKEGRSKKKLKRRRSSHDDSSDEF 120

Query: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD 180
           DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSR +RHHR IGYSSSDD
Sbjct: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRRHRHHRQIGYSSSDD 180

Query: 181 SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYR 240
           SS ENNNRREKR RHRQHE+SHRSCSIDSLDCN+WR DARSQASGRLSDAD EDSALQYR
Sbjct: 181 SSRENNNRREKRVRHRQHERSHRSCSIDSLDCNYWRWDARSQASGRLSDADHEDSALQYR 240

Query: 241 HKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH 284
           HKSSH NKHRHHHSGA  LTQIDEEHADN SDGNN GRAKDSH
Sbjct: 241 HKSSHHNKHRHHHSGASSLTQIDEEHADNVSDGNNRGRAKDSH 282

[Close]

BLAST of CmoCh04G015440 vs. ExPASy TrEMBL
Match: A0A0A0KWI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611620 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 4.0e-74
Identity = 196/304 (64.47%), Postives = 224/304 (73.68%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAKARK++A+KHKRRSVSD
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKIRASKHKRRSVSD 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           SDTDTESDSH  GRKAGKR HKKHR+HSHSDSGDSEK+KDR SKR LKRH +SHDDS D+
Sbjct: 61  SDTDTESDSHHGGRKAGKRGHKKHRKHSHSDSGDSEKKKDRESKRILKRHHTSHDDSIDK 120

Query: 121 FDGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSD 180
            D HS E RRKKRNHRRH  D+  SDESYSSSSDDDVE  KR  SR  RHHR I YSSSD
Sbjct: 121 SD-HSGEDRRKKRNHRRHVRDSLRSDESYSSSSDDDVEITKRSHSRRPRHHRRIDYSSSD 180

Query: 181 DSSSEN-NNRREKRGR----HRQHEQSHRSCSIDSLD--------------CNHWRCDAR 240
           DSSS++  +RR+K  +    H QH  ++ SC   S D               +H    +R
Sbjct: 181 DSSSDDFTSRRKKHVKHHKPHHQHNGTYSSCDEFSRDVYTTRRKKHVKHHKSHHQHEPSR 240

Query: 241 SQASGRLSDADREDSA-LQYRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRA 284
           SQ+ G+ SD + E+SA LQ RHKS+H NKH H      GL QID +H+DN S+  NH RA
Sbjct: 241 SQSLGKSSDDNHEESALLQSRHKSNHHNKHPH------GLAQIDGKHSDNESNETNHDRA 297

[Close]

BLAST of CmoCh04G015440 vs. ExPASy TrEMBL
Match: A0A6J1DAA2 (sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Momordica charantia OX=3673 GN=LOC111018646 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 6.7e-74
Identity = 194/297 (65.32%), Postives = 230/297 (77.44%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAKARKLKAAKHKRRSVSD
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSD 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           SDTDTESDSH+ GR+AGKR+HKKHR+H HSDS DSEKRKDR+SKRK KR  SS DDS+DE
Sbjct: 61  SDTDTESDSHD-GRRAGKRSHKKHRKHYHSDSSDSEKRKDRKSKRKSKRRHSSLDDSTDE 120

Query: 121 FDGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSD 180
           FD HS+E RRKKR+HRRHAHD SSSDE YSSSS DD E+ KR  SR +RHHR   Y+S D
Sbjct: 121 FDSHSEEDRRKKRHHRRHAHDGSSSDEDYSSSSGDD-ESMKRNHSRRHRHHRRTDYTSDD 180

Query: 181 DSSSENNN--RREKRGRH----RQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADRE 240
            SS+E+N   +R++R RH     +HE+SHRSCS+DSLDCN+ R           S+ + +
Sbjct: 181 SSSTEDNTSLQRKRRLRHHKHRHRHERSHRSCSVDSLDCNYGR---------HASNDNHD 240

Query: 241 DSALQYRHK-SSHPNKHRHHHSG------AGGLTQIDEEHADNNSDGNN--HGRAKD 282
           +SALQ RHK  +H +KHRHHH+G      + G +  +E+H +N  D +N  H RAKD
Sbjct: 241 ESALQSRHKRCNHHHKHRHHHTGEEKKHLSNGSS--NEKHVENEPDVSNICHDRAKD 284

[Close]

BLAST of CmoCh04G015440 vs. ExPASy TrEMBL
Match: A0A1S3BFN5 (sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Cucumis melo OX=3656 GN=LOC103489331 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 8.8e-74
Identity = 195/303 (64.36%), Postives = 223/303 (73.60%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAKARK +A+KHKRRSVSD
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKTRASKHKRRSVSD 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           SDTDTESDSH  GRKAGKR HKKHR+HSHSDSGDSEK++DR SKR LKRH+SSHDDS DE
Sbjct: 61  SDTDTESDSHHGGRKAGKRGHKKHRKHSHSDSGDSEKKRDRESKRILKRHRSSHDDSIDE 120

Query: 121 FDGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSD 180
            D HS E RRKKRN RRH HD+SSSDESYSSS+DDDVE  KR  SR  +HHR I Y SSD
Sbjct: 121 SD-HSGEDRRKKRNRRRHVHDSSSSDESYSSSNDDDVELTKRSHSRRPKHHRRIDYLSSD 180

Query: 181 DSSSEN-NNRREKRGR----HRQHEQSHRSCSIDSLD--------------CNHWRCDAR 240
           DSSS++  +RR+K  +    H QH++++ SC     D               +H    +R
Sbjct: 181 DSSSDDFTSRRKKHVKHHKPHHQHDRTYSSCDDFGRDVYTTRRKKHVKRHKSHHRHERSR 240

Query: 241 SQASGRLSDADREDSAL--QYRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGR 282
           SQ+ G+ SD + E+SAL  Q RHKS H NKH H      GL QID +H DN SD  NH R
Sbjct: 241 SQSLGKSSDDNHEESALLQQSRHKSDHHNKHPH------GLAQIDGKHPDNESDETNHDR 296

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: XP_022957050.1 (CAX-interacting protein 4 [Cucurbita moschata] >XP_022957051.1 CAX-interacting protein 4 [Cucurbita moschata])

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS 60
           MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS
Sbjct: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS 60

Query: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120
           DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF
Sbjct: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120

Query: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD 180
           DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD
Sbjct: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD 180

Query: 181 SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYR 240
           SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYR
Sbjct: 181 SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYR 240

Query: 241 HKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH 284
           HKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH
Sbjct: 241 HKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH 283

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: KAG6601258.1 (hypothetical protein SDJN03_06491, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032050.1 hypothetical protein SDJN02_06092, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506.1 bits (1302), Expect = 1.9e-139
Identity = 277/283 (97.88%), Postives = 279/283 (98.59%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS 60
           MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVS+S
Sbjct: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSNS 60

Query: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120
           DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF
Sbjct: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120

Query: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD 180
           DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD
Sbjct: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD 180

Query: 181 SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYR 240
           SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCN+WRCDARSQASGRLSD D EDSALQYR
Sbjct: 181 SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNNWRCDARSQASGRLSDTDHEDSALQYR 240

Query: 241 HKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH 284
           HKSSH NKHRHHHSGA GLTQIDEEHADNNSDGNNHGRAKDSH
Sbjct: 241 HKSSHHNKHRHHHSGASGLTQIDEEHADNNSDGNNHGRAKDSH 283

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: XP_022984391.1 (sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucurbita maxima] >XP_022984467.1 sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucurbita maxima])

HSP 1 Score: 458.4 bits (1178), Expect = 4.6e-125
Identity = 258/283 (91.17%), Postives = 269/283 (95.05%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQRLEAA+KAEAAEAKARKLKAAKHKRRSVS+S
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQRLEAASKAEAAEAKARKLKAAKHKRRSVSNS 60

Query: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120
           DTD+ESDSHERGRKAGKRTHKKHRRHSHSDSGDS K+K+ RSK+KLKR +SSHDDSSDEF
Sbjct: 61  DTDSESDSHERGRKAGKRTHKKHRRHSHSDSGDS-KKKEGRSKKKLKRRRSSHDDSSDEF 120

Query: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDD 180
           DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSR +RHHR IGYSSSDD
Sbjct: 121 DGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRRHRHHRQIGYSSSDD 180

Query: 181 SSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQYR 240
           SS ENNNRREKR RHRQHE+SHRSCSIDSLDCN+WR DARSQASGRLSDAD EDSALQYR
Sbjct: 181 SSRENNNRREKRVRHRQHERSHRSCSIDSLDCNYWRWDARSQASGRLSDADHEDSALQYR 240

Query: 241 HKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH 284
           HKSSH NKHRHHHSGA  LTQIDEEHADN SDGNN GRAKDSH
Sbjct: 241 HKSSHHNKHRHHHSGASSLTQIDEEHADNVSDGNNRGRAKDSH 282

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: XP_023542983.1 (CAX-interacting protein 4 [Cucurbita pepo subsp. pepo] >XP_023542992.1 CAX-interacting protein 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 453.4 bits (1165), Expect = 1.5e-123
Identity = 253/271 (93.36%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKR SVS+S
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRISVSNS 60

Query: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120
           DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRK+RRSKRKLKRH+SSHDDSSDEF
Sbjct: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKERRSKRKLKRHRSSHDDSSDEF 120

Query: 121 DGHS-DEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSD 180
           DGHS DEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSR +RHHR IGYSSSD
Sbjct: 121 DGHSDDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRRHRHHRQIGYSSSD 180

Query: 181 DSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQY 240
           DSSSENNNRREKR RHRQHE+ HRSCSIDSLDCN+WRCDARSQASGRLSDAD EDSALQY
Sbjct: 181 DSSSENNNRREKRVRHRQHERPHRSCSIDSLDCNYWRCDARSQASGRLSDADHEDSALQY 240

Query: 241 RHKSSHPNKHRHHHSGAGGLTQIDEEHADNN 271
           +HKSSH NKHRHHHSGA GLTQIDEEHADN+
Sbjct: 241 KHKSSHHNKHRHHHSGASGLTQIDEEHADND 271

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: XP_038892014.1 (sarcoplasmic reticulum histidine-rich calcium-binding protein [Benincasa hispida] >XP_038892015.1 sarcoplasmic reticulum histidine-rich calcium-binding protein [Benincasa hispida])

HSP 1 Score: 364.8 bits (935), Expect = 6.9e-97
Identity = 221/291 (75.95%), Postives = 253/291 (86.94%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAKARK+KA+KHKRRS+SD
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKIKASKHKRRSLSD 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           SDTD+ESDSHE GRKAGKR+HKKHR+HS+SDSGDSEKRK+R+SK+KLKR +SSHDDSSDE
Sbjct: 61  SDTDSESDSHEGGRKAGKRSHKKHRKHSYSDSGDSEKRKERKSKQKLKRRRSSHDDSSDE 120

Query: 121 FDGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSD 180
            D HS E RRKKR+HRRHAHDNSSSDESYSSSSDDDVE  KR  SR +RHHR I  SSSD
Sbjct: 121 SDDHSGEDRRKKRSHRRHAHDNSSSDESYSSSSDDDVERTKRSHSRRHRHHRRIDCSSSD 180

Query: 181 DSSSENNN--RREKRGR----HRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADRE 240
           DS+SE+N+  +R+KR R    H +H +SHRSCSIDSL+ N+WR DARSQ+SG+ SD + E
Sbjct: 181 DSNSEDNSSLQRKKRVRHHKSHHRHGRSHRSCSIDSLNRNYWRRDARSQSSGKSSDDNHE 240

Query: 241 DSA-LQYRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH 284
           +SA LQ RHKSSH NK+RHHHSG  G TQIDE+HAD NSD N+H RAKDSH
Sbjct: 241 ESALLQSRHKSSHHNKYRHHHSGVDGSTQIDEKHADKNSDENDHDRAKDSH 291

[Close]

BLAST of CmoCh04G015440 vs. TAIR 10
Match: AT2G01100.1 (unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257; Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes - 4708 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-27
Identity = 106/265 (40.00%), Postives = 153/265 (57.74%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MD KKFIQ+VEEKKRR LEK+EAPLKWEQ+LEAAA A+A  E K ++ K  K K+R+ S+
Sbjct: 1   MDCKKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASE 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           S   +ESDS    R+  +R+H KHRRH+HSDS DS++RK+++S+R+ +R  S  DDS+ +
Sbjct: 61  S--SSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGD 120

Query: 121 FD-GHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSS 180
           ++ G  DE R K ++HRRH        + +SS    D ++ +  R +H +HHR     +S
Sbjct: 121 YESGSEDELRMKIKHHRRH--------KWHSSRKTCDDDSTEDVRRKHLKHHRRSEVVTS 180

Query: 181 DDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQ 240
            DS  E+  RR  RG++ +H +   S S    D        R     RL+++  E+    
Sbjct: 181 SDSEEESGRRR--RGKYHRHNRGSASSSGSEEDSGK-SMKRRQHKRHRLAESSSEEDGAM 240

Query: 241 YRHKSSHPNKHRHHHSGAGGLTQID 264
            R         RHH  G    ++ D
Sbjct: 241 RR--------TRHHKHGRDSASESD 244

[Close]

BLAST of CmoCh04G015440 vs. TAIR 10
Match: AT2G01100.2 (unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257; Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes - 4708 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-27
Identity = 106/265 (40.00%), Postives = 153/265 (57.74%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MD KKFIQ+VEEKKRR LEK+EAPLKWEQ+LEAAA A+A  E K ++ K  K K+R+ S+
Sbjct: 1   MDCKKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASE 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           S   +ESDS    R+  +R+H KHRRH+HSDS DS++RK+++S+R+ +R  S  DDS+ +
Sbjct: 61  S--SSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGD 120

Query: 121 FD-GHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSS 180
           ++ G  DE R K ++HRRH        + +SS    D ++ +  R +H +HHR     +S
Sbjct: 121 YESGSEDELRMKIKHHRRH--------KWHSSRKTCDDDSTEDVRRKHLKHHRRSEVVTS 180

Query: 181 DDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQ 240
            DS  E+  RR  RG++ +H +   S S    D        R     RL+++  E+    
Sbjct: 181 SDSEEESGRRR--RGKYHRHNRGSASSSGSEEDSGK-SMKRRQHKRHRLAESSSEEDGAM 240

Query: 241 YRHKSSHPNKHRHHHSGAGGLTQID 264
            R         RHH  G    ++ D
Sbjct: 241 RR--------TRHHKHGRDSASESD 244

[Close]

BLAST of CmoCh04G015440 vs. TAIR 10
Match: AT2G01100.3 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-27
Identity = 106/265 (40.00%), Postives = 153/265 (57.74%), Query Frame = 0


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MD KKFIQ+VEEKKRR LEK+EAPLKWEQ+LEAAA A+A  E K ++ K  K K+R+ S+
Sbjct: 1   MDCKKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASE 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           S   +ESDS    R+  +R+H KHRRH+HSDS DS++RK+++S+R+ +R  S  DDS+ +
Sbjct: 61  S--SSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGD 120

Query: 121 FD-GHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSS 180
           ++ G  DE R K ++HRRH        + +SS    D ++ +  R +H +HHR     +S
Sbjct: 121 YESGSEDELRMKIKHHRRH--------KWHSSRKTCDDDSTEDVRRKHLKHHRRSEVVTS 180

Query: 181 DDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQ 240
            DS  E+  RR  RG++ +H +   S S    D        R     RL+++  E+    
Sbjct: 181 SDSEEESGRRR--RGKYHRHNRGSASSSGSEEDSGK-SMKRRQHKRHRLAESSSEEDGAM 240

Query: 241 YRHKSSHPNKHRHHHSGAGGLTQID 264
            R         RHH  G    ++ D
Sbjct: 241 RR--------TRHHKHGRDSASESD 244

The following BLAST results are available for this feature:

BLAST of CmoCh04G015440 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G015440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZG1	6.2e-144	100.00	CAX-interacting protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111458543 PE=4 SV=...	[more]
A0A6J1J292	2.2e-125	91.17	sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Cucurbita maxim...	[more]
A0A0A0KWI8	4.0e-74	64.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611620 PE=4 SV=1	[more]
A0A6J1DAA2	6.7e-74	65.32	sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Momordica chara...	[more]
A0A1S3BFN5	8.8e-74	64.36	sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Cucumis melo OX...	[more]

BLAST of CmoCh04G015440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957050.1	1.3e-143	100.00	CAX-interacting protein 4 [Cucurbita moschata] >XP_022957051.1 CAX-interacting p...	[more]
KAG6601258.1	1.9e-139	97.88	hypothetical protein SDJN03_06491, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022984391.1	4.6e-125	91.17	sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucurbita maxima]...	[more]
XP_023542983.1	1.5e-123	93.36	CAX-interacting protein 4 [Cucurbita pepo subsp. pepo] >XP_023542992.1 CAX-inter...	[more]
XP_038892014.1	6.9e-97	75.95	sarcoplasmic reticulum histidine-rich calcium-binding protein [Benincasa hispida...	[more]

BLAST of CmoCh04G015440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01100.1	2.1e-27	40.00	unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae -...	[more]
AT2G01100.2	2.1e-27	40.00	unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae -...	[more]
AT2G01100.3	2.1e-27	40.00	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..283
None	No IPR available	PANTHER	PTHR37715	OS01G0120700 PROTEIN	coord: 1..275
None	No IPR available	PANTHER	PTHR37715:SF1	OS01G0120700 PROTEIN	coord: 1..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G015440.1	CmoCh04G015440.1	mRNA