CmoCh04G015330 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G015330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	beta-glucuronosyltransferase GlcAT14A-like
Location	Cmo_Chr04: 7847937 .. 7848365 (-)
RNA-Seq Expression	CmoCh04G015330
Synteny	CmoCh04G015330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTACAGTGGATCCTCTTACCTTGCCACGACTTTGCATGCTGCAGCGGTTCTGCTCGAGATTGACTGTGGCTGGGATTGGTTTATCACTTTGAGTGTGATGGATTATGCCAATTGGTTGAATCTCGATTGTTCTGCATACTTTTCTGGTTAATGTGCATCTATGTGTTTTAGATTGTTCTTTACTGGATCATAATATTGGGCTTTTGCAGTGAATTTATTGTCGTTTGTGATCTTCCAAATATCACCCGACGTTGGTGATCTATCGTGGCCTGATATGTGGATGAAGTTGTCCTGATTGATTTTTAGTATCTTGTCCTGATTGCATATGTCCAGTTGTAACTAAGATTTAAGCTCTGGTGCTAGAGGTTACTGTGTCTGTTTTCCAGGCTTGAATTATGACCCTGTGAAGGAGGGATTAGCTTAG

mRNA sequence

ATGACTTACAGTGGATCCTCTTACCTTGCCACGACTTTGCATGCTGCAGCGGTTCTGCTCGAGATTGACTGTGGCTGGGATTGGTTTATCACTTTGAGTGTGATGGATTATGCCAATTGGTTGAATCTCGATTGTTCTGCATACTTTTCTGATTTAAGCTCTGGTGCTAGAGGTTACTGTGTCTGTTTTCCAGGCTTGAATTATGACCCTGTGAAGGAGGGATTAGCTTAG

Coding sequence (CDS)

ATGACTTACAGTGGATCCTCTTACCTTGCCACGACTTTGCATGCTGCAGCGGTTCTGCTCGAGATTGACTGTGGCTGGGATTGGTTTATCACTTTGAGTGTGATGGATTATGCCAATTGGTTGAATCTCGATTGTTCTGCATACTTTTCTGATTTAAGCTCTGGTGCTAGAGGTTACTGTGTCTGTTTTCCAGGCTTGAATTATGACCCTGTGAAGGAGGGATTAGCTTAG

Protein sequence

MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDYANWLNLDCSAYFSDLSSGARGYCVCFPGLNYDPVKEGLA

Homology

[Close]

BLAST of CmoCh04G015330 vs. ExPASy Swiss-Prot
Match: Q9FLD7 (Beta-glucuronosyltransferase GlcAT14A OS=Arabidopsis thaliana OX=3702 GN=GLCAT14A PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 6.5e-05
Identity = 25/52 (48.08%), Postives = 29/52 (55.77%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDYANWLNLDCSAYFSDL 53
           +TY G + +A TLHAAA+LL     WDWFI LS  DY      D    FS L
Sbjct: 170 VTYRGPTMVANTLHAAAILLREGADWDWFINLSSSDYPLVTQDDLLHIFSHL 221

[Close]

BLAST of CmoCh04G015330 vs. ExPASy Swiss-Prot
Match: Q9LFQ0 (Beta-glucuronosyltransferase GlcAT14B OS=Arabidopsis thaliana OX=3702 GN=GLCAT14B PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.1e-04
Identity = 21/37 (56.76%), Postives = 25/37 (67.57%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           +TY G + +A TLHAAA+LL     WDWFI LS  DY
Sbjct: 157 VTYRGPTMVANTLHAAAILLREGGDWDWFINLSASDY 193

[Close]

BLAST of CmoCh04G015330 vs. ExPASy TrEMBL
Match: A0A6J1D9W2 (beta-glucuronosyltransferase GlcAT14A-like OS=Momordica charantia OX=3673 GN=LOC111018704 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-08
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           +TYSGSSY+AT LHAAA+LL+ID GWDWFITLS MDY
Sbjct: 119 VTYSGSSYIATILHAAAILLKIDSGWDWFITLSAMDY 155

[Close]

BLAST of CmoCh04G015330 vs. ExPASy TrEMBL
Match: A0A5A7SZH4 (Beta-glucuronosyltransferase GlcAT14A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G006320 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-08
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           MTYSGSSY+A TLHAAA+LL+ID GWDWFITLS  DY
Sbjct: 119 MTYSGSSYIAATLHAAAILLKIDSGWDWFITLSAKDY 155

[Close]

BLAST of CmoCh04G015330 vs. ExPASy TrEMBL
Match: A0A0A0KRB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611740 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-08
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           MTYSGSSY+A TLHAAA+LL+ID GWDWFITLS  DY
Sbjct: 119 MTYSGSSYIAATLHAAAILLKIDSGWDWFITLSAKDY 155

[Close]

BLAST of CmoCh04G015330 vs. ExPASy TrEMBL
Match: A0A1S3BF77 (beta-glucuronosyltransferase GlcAT14A OS=Cucumis melo OX=3656 GN=LOC103489344 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-08
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           MTYSGSSY+A TLHAAA+LL+ID GWDWFITLS  DY
Sbjct: 119 MTYSGSSYIAATLHAAAILLKIDSGWDWFITLSAKDY 155

[Close]

BLAST of CmoCh04G015330 vs. ExPASy TrEMBL
Match: A0A540KU68 (EAF domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_036675 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDYANWLNLDCSAYFSDL 53
           +TY GSS +ATTLHAAA+ L++D GWDWF+TLS MDY      D S  FS +
Sbjct: 425 ITYMGSSNIATTLHAAAIFLKVDSGWDWFVTLSAMDYPLITQDDLSHVFSSV 476

[Close]

BLAST of CmoCh04G015330 vs. NCBI nr
Match: KAG7032040.1 (Beta-glucuronosyltransferase GlcAT14C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108.2 bits (269), Expect = 3.1e-20
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 0


Query: 1  MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDYANWLNLDCSAYFS 51
          MTY+GSSYLATTLHAAAVLLEIDCGWDWFITLSVMDYANWLNLDCSAYFS
Sbjct: 30 MTYNGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDYANWLNLDCSAYFS 79

[Close]

BLAST of CmoCh04G015330 vs. NCBI nr
Match: XP_038892581.1 (beta-glucuronosyltransferase GlcAT14A-like [Benincasa hispida] >XP_038892582.1 beta-glucuronosyltransferase GlcAT14A-like [Benincasa hispida])

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-09
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           MTYSGSSY+ATTLHAAAVLL+ID GWDWFITLS MDY
Sbjct: 119 MTYSGSSYIATTLHAAAVLLKIDSGWDWFITLSAMDY 155

[Close]

BLAST of CmoCh04G015330 vs. NCBI nr
Match: XP_022150608.1 (beta-glucuronosyltransferase GlcAT14A-like [Momordica charantia])

HSP 1 Score: 68.6 bits (166), Expect = 2.7e-08
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           +TYSGSSY+AT LHAAA+LL+ID GWDWFITLS MDY
Sbjct: 119 VTYSGSSYIATILHAAAILLKIDSGWDWFITLSAMDY 155

[Close]

BLAST of CmoCh04G015330 vs. NCBI nr
Match: XP_008446701.1 (PREDICTED: beta-glucuronosyltransferase GlcAT14A [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 3.6e-08
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           MTYSGSSY+A TLHAAA+LL+ID GWDWFITLS  DY
Sbjct: 119 MTYSGSSYIAATLHAAAILLKIDSGWDWFITLSAKDY 155

[Close]

BLAST of CmoCh04G015330 vs. NCBI nr
Match: XP_004135058.1 (beta-glucuronosyltransferase GlcAT14A [Cucumis sativus] >XP_031742019.1 beta-glucuronosyltransferase GlcAT14A [Cucumis sativus] >KGN52143.1 hypothetical protein Csa_007725 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 3.6e-08
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           MTYSGSSY+A TLHAAA+LL+ID GWDWFITLS  DY
Sbjct: 119 MTYSGSSYIAATLHAAAILLKIDSGWDWFITLSAKDY 155

[Close]

BLAST of CmoCh04G015330 vs. TAIR 10
Match: AT3G15350.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 48.9 bits (115), Expect = 2.1e-06
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           +TY G + +A TLHA AVLL+ +  WDWFI LS  DY
Sbjct: 150 VTYKGPTMVANTLHACAVLLKRNANWDWFINLSASDY 186

[Close]

BLAST of CmoCh04G015330 vs. TAIR 10
Match: AT3G15350.2 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 48.9 bits (115), Expect = 2.1e-06
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           +TY G + +A TLHA AVLL+ +  WDWFI LS  DY
Sbjct: 150 VTYKGPTMVANTLHACAVLLKRNANWDWFINLSASDY 186

[Close]

BLAST of CmoCh04G015330 vs. TAIR 10
Match: AT5G39990.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 47.8 bits (112), Expect = 4.6e-06
Identity = 25/52 (48.08%), Postives = 29/52 (55.77%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDYANWLNLDCSAYFSDL 53
           +TY G + +A TLHAAA+LL     WDWFI LS  DY      D    FS L
Sbjct: 170 VTYRGPTMVANTLHAAAILLREGADWDWFINLSSSDYPLVTQDDLLHIFSHL 221

[Close]

BLAST of CmoCh04G015330 vs. TAIR 10
Match: AT1G71070.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 47.4 bits (111), Expect = 6.1e-06
Identity = 21/53 (39.62%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDYANWLNLDCSAYFSDLS 54
           ++ +G+S +A+TLHA ++LL++D  W+WFI LS +DY      D S  F+ ++
Sbjct: 118 LSENGASKIASTLHAVSILLKLDPTWNWFIELSALDYPLITQDDLSHVFASVN 170

[Close]

BLAST of CmoCh04G015330 vs. TAIR 10
Match: AT5G15050.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 47.0 bits (110), Expect = 7.9e-06
Identity = 21/37 (56.76%), Postives = 25/37 (67.57%), Query Frame = 0


Query: 1   MTYSGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 38
           +TY G + +A TLHAAA+LL     WDWFI LS  DY
Sbjct: 157 VTYRGPTMVANTLHAAAILLREGGDWDWFINLSASDY 193

The following BLAST results are available for this feature:

BLAST of CmoCh04G015330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLD7	6.5e-05	48.08	Beta-glucuronosyltransferase GlcAT14A OS=Arabidopsis thaliana OX=3702 GN=GLCAT14...	[more]
Q9LFQ0	1.1e-04	56.76	Beta-glucuronosyltransferase GlcAT14B OS=Arabidopsis thaliana OX=3702 GN=GLCAT14...	[more]

BLAST of CmoCh04G015330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9W2	1.3e-08	81.08	beta-glucuronosyltransferase GlcAT14A-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7SZH4	1.7e-08	81.08	Beta-glucuronosyltransferase GlcAT14A OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0KRB3	1.7e-08	81.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611740 PE=4 SV=1	[more]
A0A1S3BF77	1.7e-08	81.08	beta-glucuronosyltransferase GlcAT14A OS=Cucumis melo OX=3656 GN=LOC103489344 PE...	[more]
A0A540KU68	1.5e-07	57.69	EAF domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_036675 PE=4 SV...	[more]

BLAST of CmoCh04G015330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032040.1	3.1e-20	98.00	Beta-glucuronosyltransferase GlcAT14C, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_038892581.1	1.4e-09	89.19	beta-glucuronosyltransferase GlcAT14A-like [Benincasa hispida] >XP_038892582.1 b...	[more]
XP_022150608.1	2.7e-08	81.08	beta-glucuronosyltransferase GlcAT14A-like [Momordica charantia]	[more]
XP_008446701.1	3.6e-08	81.08	PREDICTED: beta-glucuronosyltransferase GlcAT14A [Cucumis melo]	[more]
XP_004135058.1	3.6e-08	81.08	beta-glucuronosyltransferase GlcAT14A [Cucumis sativus] >XP_031742019.1 beta-glu...	[more]

BLAST of CmoCh04G015330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15350.1	2.1e-06	56.76	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT3G15350.2	2.1e-06	56.76	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT5G39990.1	4.6e-06	48.08	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT1G71070.1	6.1e-06	39.62	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT5G15050.1	7.9e-06	56.76	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003406	Glycosyl transferase, family 14	PFAM	PF02485	Branch	coord: 2..52 e-value: 2.5E-6 score: 27.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G015330.1	CmoCh04G015330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0015020	glucuronosyltransferase activity
molecular_function	GO:0016757	glycosyltransferase activity