CmoCh04G015090 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G015090
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	glycine-rich RNA-binding protein GRP1A-like
Location	Cmo_Chr04: 7729066 .. 7733271 (+)
RNA-Seq Expression	CmoCh04G015090
Synteny	CmoCh04G015090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGAAGAAGAAGAACAGAGATGGCGTTGATTTTGATGCTGCTTTGTTCCTCTATGGTGGCTTCTTTTGCTTTCAAACAACTTTTCACAACAGGTTATTTTCCTCGTACACAAATTTTGTATGTTTTTTCAGTATAAAAACTGAAAGGATGAGGGATCGAACCTCGGATCTCAAAAGAGTAATGTTCATGTCAAATTTTGTTGACAAATTTATATATTTATTTACTTATGGTAGATATTGCTGAATTTCAAGAAAGTGAGCATAGGGAGAAGTATGGTAAAAATGGCGTTGTAATCCCAATGCGCATAGTTAGTATACTTGGTGGCGGAGGAGGATCCGGCGGAGGAGGATCCGGCGGAGGAGGTCGTGGTGGCGGTGGAGGAGGATCGTCAGGAGGAGGTAGTGGTGGCGGAGGAGGACGTGGTGGCGGAGGTGGATCCCCAGGAGGAGGACGTGGTGGCGGAGGTGGATCCCCAGGAGGAGGACGTGGTGGCGGAGGAGGATCCTCAGGAGGAGGTCGTGGCGGTGGCGGAGGAGGATCCGCAGGAGGAGGTAGTGGCGGCAGCGGAGGAGGATCGGCAGGAGGAGGTAGTGGTGGCGGAGGAGGAGGATCAGAAGGAGGAGGTCGTGTTGGGAGAGGAGGAGCTCACTCTGGCACAGGAAATTGGCATCAGAACTCCATGAGGTTCATAGTAGCTGGAGTTTCCTCATCAGTTGCATATTTATTTAGGCTTATTTGATTATGAACACATGTATACTCAAAATCATGAATAATGTGTTCGATAAAAGAAGCACAATGGGGGCAATGGGACGGTGTCTAATTTGTTTGATTCATGTATTATGTATGTAATTTTGTGTTCATATTAACTCATTCTTTGGTTTTGGTTGGTGTTCTGGGATTCTACACATTTGTTCAACTCTAATTTTATTAAATACATGTTAGAATTTTATTTGTTCAACATTAATTTATTATCATTTTTGTTTTTGTTTATATGCTAATTTATATCAAAATGTTATTTTTATATAAAATTAATAAAGGTGTATATCAAAAAATGGCTAGTAATCTGAACAACTCGAATAGAGTTCGCAACCCAACTCAAATCGAGTTAGATTATTGTGACTCGAGCAACTTAAATAGAGTTCACAAATCGAATTGGGTTGAGTTGTTTTTTTTTTTTCATTATTGAAAAAAATCATCCTTATGTACCATACATTTACACTAATAACTAAAACCTTATTAACCTCAAATCTCAAACCTACGCGTCACTAACATTGGTTACAAATATCAAATATTTTTAATCTTCGTAATAATTTTAGAAGTAGAATAGGACTGACTTGAGTTGTAACTCTAATTTTAACAAATTCAACCCGACCCAAATCGAAATAAAAAATAATAATAAATCAACCCAACTCAATCTTTATAGTTTTAGTTGAATAGTCTAAATTAGTTGAGTTGTTGAATCATATCCGACTTGAAATTAACCGGAAAAAGATCAATCGTCTATTACTAACCATCATAAAAATTACTATTAAACTTAATAATTAAAAAGCTACTAACTTCCTCACAAATTAACCAAAATAGTTTAAGTAATTAATTTTACAAACAGCATGCTTATAATTTTAATTAATTATGAATAGTTGAGCATAACAAGTTTCACCCAAATTTCATATATTGAGAACAGCAAACAAAACAACATCTGGAAGTGGTTTCGAGACATTAACCAATAAGACATCGAAATCAGACAAGATCAAATCAAATCAGATGGTGTACCAAAATCAAATCAGATCTAAGATCGCCAGCCAACTAGAAACCAAAACCAAAATCAAAATCAAAATCAAACTCAAACTCGAGATCGAGATCGAGATCGAGATCAAAACACCAACTGAGAAAAGGTTTCAGAATCATGGAAGAAGAACAGAAACCAAAGTGATCCTATTCAGTTTTGATTGTTATCACTCACAATCAAACAACAGTAAACCAGAAGAGTAGAAACCGTGTCTTGAAGGGGCCTTCTTTCAGCAACAGTTTCAAAAAAAGATTCGAGTTCGTGTCTCTTTTTAAAAGGATGTCTTATTCTAACCACTCTTGTTCCGTGTCCGTGTTCGTGTCCTTAAAAGAGATAAGATAGCTTTAGCGGATCAAAAGAAGACTTCCCTGCCATTTTGTATAAGTATATCACACCATTCCTAACAGCCACATACAGAAGGATCTAGATCACACAAAACCCACCTGTTTCTATTACTATGGGAAGAAGAAGGGAGCTAACCTTGATGTTCTTGCTGTTTTGTTCTACCATACCAGCCATTTCATCTGCTCTCCAGCAACAAATCCTCCCAACAGGTAACTATCCTTTCCAATCTCTCAACTAAAATTCAATTCACACAATTCTTCACAATTCTTCTCTCTTTATGTTCATGTACTTTCCAATCTTTCGATAAAAATCCATTTTTTAGTGTATCGTTCTAAATACTATTCAATGAGTTCATCACAATATGGTTGTCGTAATAACCGTCAATAGGTAATACCTATCAGATACATTGTGACAACCTAAACTAAAAAGATCATAAGTTTGCCTTTATTCTCTTTTCTCTAGAGGTGTAAAGGAAGCTATCAGAACAACTATGAGAGGAAAAGGTAAATGTAAAATACTAAGATAGTTAAAGGTTAAATGGTTCCTAAGGTTAAGCTTAGTTTAGATTAAATTGGGTAAATTTAAAATAGTAAGATAGGTTAAAGGTTAAATCATTCCTAAAGTTAAGCTTAGTTGAGTTTAAGTTAGGATAACTTAAATTCTATCCATGTTTTTAACACTAAACAGCAACAAAGTGTAAAGTATATACGACAAAGTTGAATAATGAGACCGACAATAAAATAAAGTGTGCATTCCACAAACTGTGTGAATAAACGACAAATGTGCACAATTGCAGATGTGTTGAGAATAGTAATGTGGAAAAGGAAAGAATAAAAGGTAAATAGAAGAATATAGACGAGTGAGGAGTGCAAGTTATTATGTCTTTTATAATGTCAAATGAAAATAAATATATAAATAAAATAAAGTTTAAATGGAGGGCCATAACAATGTATGACTTTTCCACTAACTTTAACTTTTGGGAGTTAATATTTCAAATCAAATCAAAGGCTAGATGCTGCTAGTGACTAAAGTGATCAAATAATAAACTAATCCAACTAGTAAGATATTCATAATTTCTAATTTATTATTTTAATTAAATGGTAATATTAAATAGAAACAAAGGGATCAAATGATCAAGGTTTCATTTATTTTATGATATATATGATGCTTATATATATTTATATATATATGTTTGGTTGCAAAAATTTTAAGTTTTTTTTAAAGTTCAAAATCTAGTGAAATAAGCTCTTCCCCATTCCTACTTTTTATTGTATTTAATTAGAGATTATATCCACTTATATTAAAAACCTCCAACTTGGTCAGAGAAGGATTAAAAAGGAGTTCGAAAAGAGAGTTAAAGAGTCTATTTTTTAAAAAAATATGTCTCAAAATTCATTTCACTAATGATGATTTTTACCTTCAAAATGTTTATTTTATGTGAAATATCAGATAATTAAGCTTAAAATTACCACTAAATTCATTTCACGTAGTTTAAAATTAAAATGGGATTTAAATCAAATACAAGATTAGAAACTTATAAAGTGGGAATTTTTGGTGCCTCACTTGTGCATGCCATGAATAGAATATTCCTACACACTTCCCACGAAGAAATAAAGGGTCACCAAAAGAAAACTTACCACTAAATTCCTACGAAGAAATAAAGGGTCACATTTGTTAAGCTTTAAGAAATGAAATTCATTATACCCCCATTCCTAAACCAGTTTCTATATGTATGCAGAGTCAAATTACCACCAGAAAACTAATGCAGAAAAACATGGCAAGGATGGTGTCACTAACCGGATTAGCAGCATATACAGTGCAAGGGCAATCACCGTTTCTCAAGGGATTGGTCATGGAAGTGCCGCCGGCGGCGGAGAAAATGGTGGTGGCGGTAGACCTCAAGCAGGAGGCGGAGGTGCGGCCGTAATCCCTGTTTATGCCGCTGGTTCGGCACAAGCACATCATCGCCAAGGTCGAACGCGCAATGCAGGAAATCACTATGAAAACAACATGGGGCTTCTGGTAGCTTCAGTTTTGGCTGCCATTGTTCATCTCCATTTAGTTTTCTGA

mRNA sequence

ATGGAAAGAAGAAGAAGAACAGAGATGGCGTTGATTTTGATGCTGCTTTGTTCCTCTATGGTGGCTTCTTTTGCTTTCAAACAACTTTTCACAACAGATATTGCTGAATTTCAAGAAAGTGAGCATAGGGAGAAGTATGGTAAAAATGGCGTTGTAATCCCAATGCGCATAGTTAGTATACTTGGTGGCGGAGGAGGATCCGGCGGAGGAGGATCCGGCGGAGGAGGTCGTGGTGGCGGTGGAGGAGGATCGTCAGGAGGAGGTAGTGGTGGCGGAGGAGGACGTGGTGGCGGAGGTGGATCCCCAGGAGGAGGACGTGGTGGCGGAGGTGGATCCCCAGGAGGAGGACGTGGTGGCGGAGGAGGATCCTCAGGAGGAGGTCGTGGCGGTGGCGGAGGAGGATCCGCAGGAGGAGGTAGTGGCGGCAGCGGAGGAGGATCGGCAGGAGGAGGTAGTGGTGGCGGAGGAGGAGGATCAGAAGGAGGAGGTCGTGTTGGGAGAGGAGGAGCTCACTCTGGCACAGGAAATTGGCATCAGAACTCCATGAGCCACATACAGAAGGATCTAGATCACACAAAACCCACCTGTTTCTATTACTATGGGAAGAAGAAGGGAGCTAACCTTGATGTTCTTGCTGTTTTGTTCTACCATACCAGCCATTTCATCTGCTCTCCAGCAACAAATCCTCCCAACAGTTTCTATATGTATGCAGAGTCAAATTACCACCAGAAAACTAATGCAGAAAAACATGGCAAGGATGGTGTCACTAACCGGATTAGCAGCATATACAGTGCAAGGGCAATCACCGTTTCTCAAGGGATTGGTCATGGAAGTGCCGCCGGCGGCGGAGAAAATGGTGGTGGCGGTAGACCTCAAGCAGGAGGCGGAGGTGCGGCCGTAATCCCTGTTTATGCCGCTGGTTCGGCACAAGCACATCATCGCCAAGGTCGAACGCGCAATGCAGGAAATCACTATGAAAACAACATGGGGCTTCTGGTAGCTTCAGTTTTGGCTGCCATTGTTCATCTCCATTTAGTTTTCTGA

Coding sequence (CDS)

ATGGAAAGAAGAAGAAGAACAGAGATGGCGTTGATTTTGATGCTGCTTTGTTCCTCTATGGTGGCTTCTTTTGCTTTCAAACAACTTTTCACAACAGATATTGCTGAATTTCAAGAAAGTGAGCATAGGGAGAAGTATGGTAAAAATGGCGTTGTAATCCCAATGCGCATAGTTAGTATACTTGGTGGCGGAGGAGGATCCGGCGGAGGAGGATCCGGCGGAGGAGGTCGTGGTGGCGGTGGAGGAGGATCGTCAGGAGGAGGTAGTGGTGGCGGAGGAGGACGTGGTGGCGGAGGTGGATCCCCAGGAGGAGGACGTGGTGGCGGAGGTGGATCCCCAGGAGGAGGACGTGGTGGCGGAGGAGGATCCTCAGGAGGAGGTCGTGGCGGTGGCGGAGGAGGATCCGCAGGAGGAGGTAGTGGCGGCAGCGGAGGAGGATCGGCAGGAGGAGGTAGTGGTGGCGGAGGAGGAGGATCAGAAGGAGGAGGTCGTGTTGGGAGAGGAGGAGCTCACTCTGGCACAGGAAATTGGCATCAGAACTCCATGAGCCACATACAGAAGGATCTAGATCACACAAAACCCACCTGTTTCTATTACTATGGGAAGAAGAAGGGAGCTAACCTTGATGTTCTTGCTGTTTTGTTCTACCATACCAGCCATTTCATCTGCTCTCCAGCAACAAATCCTCCCAACAGTTTCTATATGTATGCAGAGTCAAATTACCACCAGAAAACTAATGCAGAAAAACATGGCAAGGATGGTGTCACTAACCGGATTAGCAGCATATACAGTGCAAGGGCAATCACCGTTTCTCAAGGGATTGGTCATGGAAGTGCCGCCGGCGGCGGAGAAAATGGTGGTGGCGGTAGACCTCAAGCAGGAGGCGGAGGTGCGGCCGTAATCCCTGTTTATGCCGCTGGTTCGGCACAAGCACATCATCGCCAAGGTCGAACGCGCAATGCAGGAAATCACTATGAAAACAACATGGGGCTTCTGGTAGCTTCAGTTTTGGCTGCCATTGTTCATCTCCATTTAGTTTTCTGA

Protein sequence

MERRRRTEMALILMLLCSSMVASFAFKQLFTTDIAEFQESEHREKYGKNGVVIPMRIVSILGGGGGSGGGGSGGGGRGGGGGGSSGGGSGGGGGRGGGGGSPGGGRGGGGGSPGGGRGGGGGSSGGGRGGGGGGSAGGGSGGSGGGSAGGGSGGGGGGSEGGGRVGRGGAHSGTGNWHQNSMSHIQKDLDHTKPTCFYYYGKKKGANLDVLAVLFYHTSHFICSPATNPPNSFYMYAESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF

Homology

[Close]

BLAST of CmoCh04G015090 vs. ExPASy TrEMBL
Match: A0A6J1GZ71 (glycine-rich RNA-binding protein GRP1A-like OS=Cucurbita moschata OX=3662 GN=LOC111458855 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 8.3e-50
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 238 ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 297
           ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG
Sbjct: 33  ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 92

Query: 298 AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF 348
           AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF
Sbjct: 93  AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF 142

[Close]

BLAST of CmoCh04G015090 vs. ExPASy TrEMBL
Match: A0A6J1JB47 (uncharacterized protein LOC111485159 OS=Cucurbita maxima OX=3661 GN=LOC111485159 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-47
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 238 ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 297
           E NYHQKTNAEKHG+DGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG
Sbjct: 33  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 92

Query: 298 AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF 348
           AAVIPVYAAGSAQAHHRQGR RNAGNHYENNMGLLVASVLAAI HLHLVF
Sbjct: 93  AAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVLAAIAHLHLVF 142

[Close]

BLAST of CmoCh04G015090 vs. ExPASy TrEMBL
Match: A0A6J1J9S2 (glycine-rich protein DOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111484806 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.6e-30
Identity = 134/183 (73.22%), Postives = 134/183 (73.22%), Query Frame = 0


Query: 3   RRRRTEMALILMLLCSSMVASFAFKQLFTTDIAEFQESEHREKYGKNGVVIPMRIVSILG 62
           RRRR EMALILMLL SSMVASFAFKQLFTTDIAEFQESEHREKYGKNGVVIPM IV  LG
Sbjct: 6   RRRRREMALILMLLWSSMVASFAFKQLFTTDIAEFQESEHREKYGKNGVVIPMHIVIGLG 65

Query: 63  GGGGSGGGGSGGGGRGGGGGGSSGGGSGGGGGRGGGGGSPGGGRGGGGGSPGGGRGGGGG 122
           GGGGSGGGG G                                 G GGGS GGGRGGGGG
Sbjct: 66  GGGGSGGGGRG---------------------------------GSGGGSSGGGRGGGGG 125

Query: 123 SSGGGRGGGGGGSAGGGSGGSGGGSAGGGSGGGGGGSEGGGRVGRGGAHSGTGNWHQNSM 182
           S G GRGGGGGGSAGGGSGG GGGS GGGS GGGGGSEGGGR GRGGAHSGTGNWHQNSM
Sbjct: 126 SPGRGRGGGGGGSAGGGSGG-GGGSTGGGS-GGGGGSEGGGRGGRGGAHSGTGNWHQNSM 153

Query: 183 SHI 186
             I
Sbjct: 186 RFI 153

[Close]

BLAST of CmoCh04G015090 vs. NCBI nr
Match: XP_022957462.1 (glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata])

HSP 1 Score: 207.6 bits (527), Expect = 1.7e-49
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 238 ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 297
           ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG
Sbjct: 33  ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 92

Query: 298 AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF 348
           AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF
Sbjct: 93  AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF 142

[Close]

BLAST of CmoCh04G015090 vs. NCBI nr
Match: XP_023517064.1 (glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo] >KAG7032020.1 hypothetical protein SDJN02_06062 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.1 bits (523), Expect = 5.0e-49
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 238 ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 297
           ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG
Sbjct: 33  ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 92

Query: 298 AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF 348
           AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAI HLHLVF
Sbjct: 93  AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIAHLHLVF 142

[Close]

BLAST of CmoCh04G015090 vs. NCBI nr
Match: KAG6601227.1 (hypothetical protein SDJN03_06460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.1 bits (523), Expect = 5.0e-49
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 238 ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 297
           ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG
Sbjct: 24  ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 83

Query: 298 AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF 348
           AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAI HLHLVF
Sbjct: 84  AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIAHLHLVF 133

[Close]

BLAST of CmoCh04G015090 vs. NCBI nr
Match: XP_022987717.1 (uncharacterized protein LOC111485159 [Cucurbita maxima])

HSP 1 Score: 200.3 bits (508), Expect = 2.7e-47
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 238 ESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 297
           E NYHQKTNAEKHG+DGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG
Sbjct: 33  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGG 92

Query: 298 AAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLVASVLAAIVHLHLVF 348
           AAVIPVYAAGSAQAHHRQGR RNAGNHYENNMGLLVASVLAAI HLHLVF
Sbjct: 93  AAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVLAAIAHLHLVF 142

[Close]

BLAST of CmoCh04G015090 vs. NCBI nr
Match: XP_022987217.1 (glycine-rich protein DOT1-like [Cucurbita maxima])

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-29
Identity = 134/183 (73.22%), Postives = 134/183 (73.22%), Query Frame = 0


Query: 3   RRRRTEMALILMLLCSSMVASFAFKQLFTTDIAEFQESEHREKYGKNGVVIPMRIVSILG 62
           RRRR EMALILMLL SSMVASFAFKQLFTTDIAEFQESEHREKYGKNGVVIPM IV  LG
Sbjct: 6   RRRRREMALILMLLWSSMVASFAFKQLFTTDIAEFQESEHREKYGKNGVVIPMHIVIGLG 65

Query: 63  GGGGSGGGGSGGGGRGGGGGGSSGGGSGGGGGRGGGGGSPGGGRGGGGGSPGGGRGGGGG 122
           GGGGSGGGG G                                 G GGGS GGGRGGGGG
Sbjct: 66  GGGGSGGGGRG---------------------------------GSGGGSSGGGRGGGGG 125

Query: 123 SSGGGRGGGGGGSAGGGSGGSGGGSAGGGSGGGGGGSEGGGRVGRGGAHSGTGNWHQNSM 182
           S G GRGGGGGGSAGGGSGG GGGS GGGS GGGGGSEGGGR GRGGAHSGTGNWHQNSM
Sbjct: 126 SPGRGRGGGGGGSAGGGSGG-GGGSTGGGS-GGGGGSEGGGRGGRGGAHSGTGNWHQNSM 153

Query: 183 SHI 186
             I
Sbjct: 186 RFI 153

The following BLAST results are available for this feature:

BLAST of CmoCh04G015090 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G015090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZ71	8.3e-50	100.00	glycine-rich RNA-binding protein GRP1A-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JB47	1.3e-47	96.36	uncharacterized protein LOC111485159 OS=Cucurbita maxima OX=3661 GN=LOC111485159...	[more]
A0A6J1J9S2	5.6e-30	73.22	glycine-rich protein DOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111484806 PE=4 ...	[more]

BLAST of CmoCh04G015090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957462.1	1.7e-49	100.00	glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata]	[more]
XP_023517064.1	5.0e-49	99.09	glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo] >KAG703...	[more]
KAG6601227.1	5.0e-49	99.09	hypothetical protein SDJN03_06460, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022987717.1	2.7e-47	96.36	uncharacterized protein LOC111485159 [Cucurbita maxima]	[more]
XP_022987217.1	1.2e-29	73.22	glycine-rich protein DOT1-like [Cucurbita maxima]	[more]

BLAST of CmoCh04G015090 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..180
None	No IPR available	PANTHER	PTHR36245	GLYCINE-RICH PROTEIN DOT1-LIKE	coord: 214..344
None	No IPR available	PANTHER	PTHR36245:SF2	PROTEIN, PUTATIVE-RELATED	coord: 214..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G015090.1	CmoCh04G015090.1	mRNA