CmoCh04G014190 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G014190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Annexin
Location	Cmo_Chr04: 7227970 .. 7228613 (+)
RNA-Seq Expression	CmoCh04G014190
Synteny	CmoCh04G014190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAGTTAGCAATCACACAGCTTTAGGCACTATAAAATGGGATGAGTATGGGCAACACTGAGTAACTCATCCTAAAAGCCTTCTTCACCAAAATTCTCTCCTCTTGCAATGAAGACTGTTTCCATGCTCCTCTGCTTCCTTTTGCTTGCCAACCTCTGCTATGCAGCAGAGCAAGAAATGGGTAAGTTGGAGGCCGCCCAAGGTACCTTCACCAACCTTTTAGGCTCATTTTGGGTCATTTTCAGGCTAAAAAATGCTTGTTGTTTTGATCATGTCTGTCTTCATTTTATGCAGGCACCAAAGGAGAAGAAGGGGAAGAGACCGAAGCAGAGAAATTGAAGCTTATTCCACACCACATACCATTCTACAAGAAGCCGCTTTTGAAGGCAGCTCCAAAGAAGCCAATTCCGCATCACCCAATCCTCAAGAAGCCATTTCCAAAGCCTCGTTATCCGCCAGTGTTCCCCACCCATCCTTGAAACAAACTATGCTCATGAGCCCTTATAATGCCATGGAATAATAAGCTTTACTGCATAGTTAAGTTTTAGAAACCATGAGTTTATTTTGGAGTCAGCTTCCTTTGCTACTACTACTCTTCACTGTTCTTGTTCTTGTTGTGTTCAATCAAATAATAAACTATCG

mRNA sequence

ATTTTAGTTAGCAATCACACAGCTTTAGGCACTATAAAATGGGATGAGTATGGGCAACACTGAGTAACTCATCCTAAAAGCCTTCTTCACCAAAATTCTCTCCTCTTGCAATGAAGACTGTTTCCATGCTCCTCTGCTTCCTTTTGCTTGCCAACCTCTGCTATGCAGCAGAGCAAGAAATGGGTAAGTTGGAGGCCGCCCAAGGCACCAAAGGAGAAGAAGGGGAAGAGACCGAAGCAGAGAAATTGAAGCTTATTCCACACCACATACCATTCTACAAGAAGCCGCTTTTGAAGGCAGCTCCAAAGAAGCCAATTCCGCATCACCCAATCCTCAAGAAGCCATTTCCAAAGCCTCGTTATCCGCCAGTGTTCCCCACCCATCCTTGAAACAAACTATGCTCATGAGCCCTTATAATGCCATGGAATAATAAGCTTTACTGCATAGTTAAGTTTTAGAAACCATGAGTTTATTTTGGAGTCAGCTTCCTTTGCTACTACTACTCTTCACTGTTCTTGTTCTTGTTGTGTTCAATCAAATAATAAACTATCG

Coding sequence (CDS)

ATGAAGACTGTTTCCATGCTCCTCTGCTTCCTTTTGCTTGCCAACCTCTGCTATGCAGCAGAGCAAGAAATGGGTAAGTTGGAGGCCGCCCAAGGCACCAAAGGAGAAGAAGGGGAAGAGACCGAAGCAGAGAAATTGAAGCTTATTCCACACCACATACCATTCTACAAGAAGCCGCTTTTGAAGGCAGCTCCAAAGAAGCCAATTCCGCATCACCCAATCCTCAAGAAGCCATTTCCAAAGCCTCGTTATCCGCCAGTGTTCCCCACCCATCCTTGA

Protein sequence

MKTVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKGEEGEETEAEKLKLIPHHIPFYKKPLLKAAPKKPIPHHPILKKPFPKPRYPPVFPTHP

Homology

[Close]

BLAST of CmoCh04G014190 vs. ExPASy TrEMBL
Match: A0A6J1CED0 (uncharacterized protein LOC111009954 OS=Momordica charantia OX=3673 GN=LOC111009954 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.9e-12
Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 3   TVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKG--EEGEETEAEKLKLIPHH-IPFYKKP 62
           ++ +LL  LLL N+C AAE+ + + +  Q      + GE  + EK + + HH  P YKKP
Sbjct: 37  SLGILLSLLLLVNVCNAAEKNVAEFQPGQDADDITKNGEAVQGEKFRFLSHHNKPHYKKP 96

Query: 63  LLKAAP----KKPIPHHPILKKPFPKPRYPPVFPTHP 93
             +  P    KKPIPHHPILKKP PKP +PP FPTHP
Sbjct: 97  FFQQIPHPIVKKPIPHHPILKKPLPKPHFPPFFPTHP 133

[Close]

BLAST of CmoCh04G014190 vs. ExPASy TrEMBL
Match: A0A0A0KRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11
Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 4  VSMLLCFLLLANLCYAAEQEMGKLEAAQGTK-GEEGEETEAEKLKLIPHHIPFYKKPLLK 63
          +++ L   LL N CYAAE+       AQG    + GEE + EK K +P HIPFYKKP+ K
Sbjct: 1  MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK 60

Query: 64 AAPKKPIPHHPILKKPFPKPRYPPVFPTHP 93
                IP  PI+KKPFPKP  PPV P+HP
Sbjct: 61 T-----IPRQPIIKKPFPKPYRPPVLPSHP 85

[Close]

BLAST of CmoCh04G014190 vs. ExPASy TrEMBL
Match: A0A5A7SY00 (Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007700 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.9e-11
Identity = 51/121 (42.15%), Postives = 63/121 (52.07%), Query Frame = 0


Query: 4   VSMLLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHIPFYKKPL 63
           + +LL FLLL N CYAAE+ + + +  +G  G   + GEE + EK K + HH P+YKKP 
Sbjct: 396 LGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPYYKKPF 455

Query: 64  LKAAP----------------KKPIPHHPILKKP-------------FPKPRYPPVFPTH 93
           LK  P                KKPIP HP LKKP             F KP +PPVF TH
Sbjct: 456 LKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPISFKKKPIPVHPFFKKPIHPPVFHTH 515

[Close]

BLAST of CmoCh04G014190 vs. ExPASy TrEMBL
Match: A0A5D3CG71 (Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002960 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.9e-11
Identity = 51/121 (42.15%), Postives = 63/121 (52.07%), Query Frame = 0


Query: 4   VSMLLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHIPFYKKPL 63
           + +LL FLLL N CYAAE+ + + +  +G  G   + GEE + EK K + HH P+YKKP 
Sbjct: 8   LGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPYYKKPF 67

Query: 64  LKAAP----------------KKPIPHHPILKKP-------------FPKPRYPPVFPTH 93
           LK  P                KKPIP HP LKKP             F KP +PPVF TH
Sbjct: 68  LKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPISFKKKPIPVHPFFKKPIHPPVFHTH 127

[Close]

BLAST of CmoCh04G014190 vs. ExPASy TrEMBL
Match: E5GCK5 (Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.9e-11
Identity = 51/121 (42.15%), Postives = 63/121 (52.07%), Query Frame = 0


Query: 4   VSMLLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHIPFYKKPL 63
           + +LL FLLL N CYAAE+ + + +  +G  G   + GEE + EK K + HH P+YKKP 
Sbjct: 386 LGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPYYKKPF 445

Query: 64  LKAAP----------------KKPIPHHPILKKP-------------FPKPRYPPVFPTH 93
           LK  P                KKPIP HP LKKP             F KP +PPVF TH
Sbjct: 446 LKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPISFKKKPIPVHPFFKKPIHPPVFHTH 505

[Close]

BLAST of CmoCh04G014190 vs. NCBI nr
Match: KAG6601142.1 (hypothetical protein SDJN03_06375, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031941.1 hypothetical protein SDJN02_05983 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.8 bits (460), Expect = 2.7e-42
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MKTVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKGEEGEETEAEKLKLIPHHIPFYKKPL 60
          MKTVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKGEEGEETEAEKLKLIPHHIPFYKKPL
Sbjct: 1  MKTVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKGEEGEETEAEKLKLIPHHIPFYKKPL 60

Query: 61 LKAAPKKPIPHHPILKKPFPKPRYPPVFPTHP 93
          LKAAPKKPIPHHPILKKPFPKPRYPPVFPTHP
Sbjct: 61 LKAAPKKPIPHHPILKKPFPKPRYPPVFPTHP 92

[Close]

BLAST of CmoCh04G014190 vs. NCBI nr
Match: XP_022138883.1 (uncharacterized protein LOC111009954 [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-11
Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 3   TVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKG--EEGEETEAEKLKLIPHH-IPFYKKP 62
           ++ +LL  LLL N+C AAE+ + + +  Q      + GE  + EK + + HH  P YKKP
Sbjct: 37  SLGILLSLLLLVNVCNAAEKNVAEFQPGQDADDITKNGEAVQGEKFRFLSHHNKPHYKKP 96

Query: 63  LLKAAP----KKPIPHHPILKKPFPKPRYPPVFPTHP 93
             +  P    KKPIPHHPILKKP PKP +PP FPTHP
Sbjct: 97  FFQQIPHPIVKKPIPHHPILKKPLPKPHFPPFFPTHP 133

[Close]

BLAST of CmoCh04G014190 vs. NCBI nr
Match: KAE8648861.1 (hypothetical protein Csa_008879 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 7.1e-11
Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 4   VSMLLCFLLLANLCYAAEQEMGKLEAAQGTK-GEEGEETEAEKLKLIPHHIPFYKKPLLK 63
           +++ L   LL N CYAAE+       AQG    + GEE + EK K +P HIPFYKKP+ K
Sbjct: 69  MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK 128

Query: 64  AAPKKPIPHHPILKKPFPKPRYPPVFPTHP 93
                 IP  PI+KKPFPKP  PPV P+HP
Sbjct: 129 T-----IPRQPIIKKPFPKPYRPPVLPSHP 153

[Close]

BLAST of CmoCh04G014190 vs. NCBI nr
Match: KAG6601141.1 (hypothetical protein SDJN03_06374, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031940.1 hypothetical protein SDJN02_05982, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.4 bits (189), Expect = 7.1e-11
Identity = 51/116 (43.97%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 1   MKTVS----MLLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHI 60
           MKT S    ++L  LL  N C+A E+ + +L +AQG  G   + GEE + EK   + HH 
Sbjct: 1   MKTASIFLGIILSLLLFVNFCFAEEENVAELHSAQGAAGVAAKNGEEDQEEKFMFLHHHK 60

Query: 61  PFYKKPLLKAAP-----------------KKPIPHHPILKKPFPKPRYPPVFPTHP 93
           P+ KKP LK  P                 KKPIP HP LKKP PKP  PPVF THP
Sbjct: 61  PYLKKPFLKPIPYKHPFLKKPIPVHHPFLKKPIPIHPFLKKPVPKPLNPPVFATHP 116

[Close]

BLAST of CmoCh04G014190 vs. NCBI nr
Match: ADN34202.1 (annexin [Cucumis melo subsp. melo])

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-10
Identity = 51/121 (42.15%), Postives = 63/121 (52.07%), Query Frame = 0


Query: 4   VSMLLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHIPFYKKPL 63
           + +LL FLLL N CYAAE+ + + +  +G  G   + GEE + EK K + HH P+YKKP 
Sbjct: 386 LGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPYYKKPF 445

Query: 64  LKAAP----------------KKPIPHHPILKKP-------------FPKPRYPPVFPTH 93
           LK  P                KKPIP HP LKKP             F KP +PPVF TH
Sbjct: 446 LKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPISFKKKPIPVHPFFKKPIHPPVFHTH 505

The following BLAST results are available for this feature:

BLAST of CmoCh04G014190 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G014190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CED0	6.9e-12	47.42	uncharacterized protein LOC111009954 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A0A0KRM7	3.4e-11	50.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1	[more]
A0A5A7SY00	5.9e-11	42.15	Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007700 PE=3 S...	[more]
A0A5D3CG71	5.9e-11	42.15	Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002960 PE=4 ...	[more]
E5GCK5	5.9e-11	42.15	Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]

BLAST of CmoCh04G014190 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601142.1	2.7e-42	100.00	hypothetical protein SDJN03_06375, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022138883.1	1.4e-11	47.42	uncharacterized protein LOC111009954 [Momordica charantia]	[more]
KAE8648861.1	7.1e-11	50.00	hypothetical protein Csa_008879 [Cucumis sativus]	[more]
KAG6601141.1	7.1e-11	43.97	hypothetical protein SDJN03_06374, partial [Cucurbita argyrosperma subsp. sorori...	[more]
ADN34202.1	1.2e-10	42.15	annexin [Cucumis melo subsp. melo]	[more]

BLAST of CmoCh04G014190 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G014190.1	CmoCh04G014190.1	mRNA