CmoCh04G013480 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G013480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Katanin p80 WD40 repeat-containing subunit B1 homolog
Location	Cmo_Chr04: 6870117 .. 6877979 (-)
RNA-Seq Expression	CmoCh04G013480
Synteny	CmoCh04G013480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGTTGGCGGAGGGAGAGGGAACACAAAACGTGAAAGCTCTCTTCTCTGATCAAATCCATTTGTTTTTTTTTTATTTTTTTATTTTGAAATTGAGTTTAGGCCTTCTGTCCTTCTCTGTCCCTCTCTGTAAGAGCTTTTGCTTCGGCGGGATATGGTTATGGCGGTGCTGCTGTAGGTGGAAGAAAGCGAAGTGATTATTGACGCCGCTGCCGCCGCCTCCGCCGGCGTCTCTGAACTTTGACCGACGCCTTAAACTTGGAATTTCTCGTTTCAAATACTGTACTGTGCTATTCTCTCTCTAGCTTCGCGTTTTTTAAATTTGGTTTTGGATTTTTGTTTTCTGTTGCCGTTGTGGTTAATGTGTGTGAGTGTGGAGAAAGATGAAGCTAACGGTTGGAAGCGTAGCGTGTTGTATTTTTTTTTTTTTCTTGACTTGCTTGAAGCAAACTGATGAGGCTCTTTTCTGGTTTGCTTCTTTGATTGTTTGTATGTTTTTTTTTTTTTTAATTCTTTTCCTATATTTGATCTGGCTGCAGGTGATTTCTTGATTAACTTTTATTTTTCCTTTGGAAATTTATGTTTACAGTGACGATATTTTAGGCTGGGAGCGGTGGTGGAAGAATTGGTGGAGTTTGCTTTTGAGATCTAAGGTGTTGTGAGTGGAGATCGTCAGTTCTTGGAAATTGTTGATGAAGCAGTGTCTCTAATTATTGCGCTATTCTCGGATTCAAATACTTCGGGAATGTGCACAGTGGAATGCCTCTCAATTCCGATTTCTAGGTTTCCTTCGCGTTCTGATGCTGTTGTTGGTCTAAATTCCTGATTATACATGCCATGACTACCAAACGGGCGTACAAGCTACGTATCCTTCCTCAATGTCTCGGGTTCAACTAGGGAGTTTAAATGTTCGAACGGAAATACTATTACTTATACTTGATCTGCTTGTATTGCCTCGTTGTTTTCAATTTGTGATTTTCATTTCCGTCTCTCCATCGGATCTCTGAGTGTGTGAATGTGATTATTCCGAAGCATTTGAGTATATAATTTGTCAATTAGAAATAGCTCTGGCTTACAGTTGGAGGCTTAGGAAGGCTCCTTCTTGTTTTTCTTAACAATTATTCAAACAGAAGAATTTGTGGCACATTCTTCCACTGTCAATTGCCTGAAGATTGGAAGGAAGTCATCCCGTGTTCTTGTCACAGGAGGGGAAGACTTCAAAGTCAATCTCTGGGCTATTGGTAAACCCAACGCCATACTGGTATGTTTCAATTTCTACTATTAATGGCTTCCTATCTCTTGGCCCTGGTTAGTAGAGTACAGAAGTTGTATAAAAATATCCTTACAAAGATTGAGAAACTAATTATTTGATAGATTTGTCTTGTACTTCTACTTCTGAATTCTTTTTCTTGAATCACATGCATCTTGTTTTATTATAGCACTTCTAATAGATCTTGTGATGAAAATAATATGCAATCTATTTTATTCACGTTAATCTCTCCTCATCTACCGAAAAAAAAAAAAAAAAACCATGTGCATTATGGTAAATAGGAATCAATAGATATAGATTATGCTATTTTAAATTTCAAAAATATTAATGCAGAATTGTTTCAGCTAAAAAGCTAAATAGCTGTGTTTGTAAGTATCATGTTTCTTTGCACTTTACTTAGTTGTACTTTCACATCCAGAGTTTGACTGGCCATACAAGCGGAATAGATTCCGTAAGCTTTGACTCATCAGAAGTGTTGGTAGCTGCAGGGGCAGCTAGTGGCACCATCAAGCTTTGGGATTTGGAGGAGGCTAAAAGTATGTTTTCTATCACCTCAACATATTTCCTTCTTCTTCGACAGTGTCCAATTTGATATTAATGATTTCCATGGATAATTGTACTGTGAAGTTTACTTATATTTTCCCTTTTATGGATTTCTCTTGTGATATTTCCTAGTTGTTCGAACACTTACGGGGCATAGATCGAATTGCATTTCTGTGGATTTTCATCCCTTTGGGGAATTCTTTGCTTCTGGGTCCTCGGATACGAATCTTAAGATATGGGATATCAGAAAGAAAGGGTGTATCCACACATACAAAGGACACACTCGAGGAGTCAATGCAATCAGATTTACTCCCGATGGCCGTTGGGTTGTATCTGGTGGAGAAGACAACACAGTGAAGGTTAGACATTGTTTTTCTTGTAGTTTAGGTTCATGAATTATTACTTTCTTTTAAGAGGAGAATGACAAGTTATTTCCCAATAAAACCTATGGAGCAAGTATAGCTTATTAGTCTCATTTTTCTAACCAGAAAAAGTATTAACCTTGTTAACTATTTTGTCTTCTTTATGGTTCTTACTAACAAAGGATTCTGGAATACTTTTCCTTCATTTTAATGTCCCAGAGAGCTTTCCTTTATCTCTATTACCCTTGGTTATAGTTTGAAATCAGGATTTCTTGTCCCCATTTCTACTACTATTGCTTATATAATTTGTTTCTTTGAACGTTTTTCCTCAATTTGTCTTCCTAGAAGTGTCTAAGCATTGGGCACAAACAACTTTGATGTATTGTCGGGTGCCAAGTGAGCTGACTTTCACTAGCGTTGCATCATTTGCTTAGGTGTGCTCACCAAGGATACTCTTTAATACTCAAATACTTCTTTCTAGTTCTTTTTTTTTTTCACATACCTACCATTCTCTAACTTTTATTCTCTTTAGCTCTTTTTCTCCTTTATTTTACTAGCAGGTGATATTCATGTGCTTAAATGGTTATAGATCACGACATTGATATGCCTAGATATTTACTCTTCTAGGTATATTTAACCATTCAATGTTTTAGCTTAATTGGGTTTGGACTTCACTTTTCACCTTACAGCCTAACCATGGAGGAGCTTTTGTATGGAAATGTATTGGCCTTCTGTATGGTGTTTGATGGAGAAGAATGAAAATATTGATAGTTGGTTTGATGATTGCAATTTTTCATGGTTTGTTTGGTTTAAACCACTGTGAGCTTTTTGTGTTGTGGGTTCTTCCATCAGATTTATTCAATGGTTTTCTTTTAATGAAATGAAAGGCATTGGTCTATGTGGATTTGAGCCAATTAACTCTACTGTGGGGTTCTTTACTTTTTTCCTTTTTGGTGGGTGAGTGCAACAGATCAGTTGAATACAAATTTGATAATTCTAATGTTTTTGGCAATGAAGGTAGAATTTCAGTTGTAGACTTGCAAACAATTTTGATGTAGGTCATTTTCTTTATTATATAATTTGTATTAACGATTATATGTTTATTATGTTGTTTCTAGAAAATGGGATACTTTATTCTCATGCTGAATTTGCTGTTGTGTTTTCATGTAATTTTCATTTCCAATTCAAAAGGAGCCTTCTAGTATGTCTTTAATGTATTTTAATTTAACAGCTCTGGGATTTAACGGCTGGAAAGTTGTTGCATGATTTCAAATCCCACGAGGGTCCGATTCAGTGTATAGACTTTCACCCTCATGAATTTTTGCTGGCAACAGGTTTGTTATACACTTTTATCCTAGTCCCTCTCCTACTATGTAAGCAAAAAAGAATTATGTGGAACTGTTATCGAATTATGTGTATTTCAGAATTTTTTTGCTTGAGGCCTGAAATTTAAATCGTGGATTTTGCATATGTGAAATACTATATCTGCTTGTAATTTCTTTTTGTTGATCAGGTTCAGCAGATAAAGCGGTTAAATTTTGGGACCTAGAAACCTTTGAGTTGATTGGTTCAGCTGGACCTGAGGTATCTTTCTAAATGCAATTTTCTTGTCCTGGCTTTTGAATAAAAATGCCTAAAGAGTGAATATTTTGTTAGGGGACTGTCTTATAATTTCTTTTAGGAGATCTCTTATTCTTGTGTCTGTTTCAGACCACTGGTGTCCGTTGTTTAACTTTTAATCCTGATGGGAGGACACTGCTTTGCGGATTGCATGAAAATTTGAAGGTAATATTTTGTGTTCAAATGGCTGTTCATCTCTCTAGAACTGCAACCTTTTCATTTTTTTAAAATTTATTTATACGATGGTGCTACTTCGTAGGTTTTCTCATGGGAACCAATAAGATGTCATGACGGTGTGGAAGTCGGTTGGTCCAGGCTGTCCGATCTTACTGTTCATGAGGGGAAACTTCTTGGGTGTTCATACAATCAGAGCTGTGTTGGAGTGTGGGTTGTAGACATTACGGTACAATGCATTATTCATTTACTCTATGTATAGAGATTGCCCACCTAATTGTTCCAGTTTTTCACGATTCTTTTACTCAATTTATTGTTCATGAAAAACAAAATCCCAATGTAATTACTTCCTTGCCTCTTGCACAGCGCACAGAACCCTATGCAATTAATAATGTTAACAGACTAAATGGTCGATTAGAGCCTAAATCCAGCAGTAATCTACCACTGCAAAATGAAAGCAATGCCAAGGCTGGTTTTGGTGGATTGTCAGTATCACAAACTTCTGAACCACAACTGAAGGAAACCAAAACATCGGGAAGGTTGTCAGTTTCACAAAATTTAGACGTTGTCAAGGATCCAAAATCTTTGTCATGTAAGCAATTTTCTTGACTTTATTTTCATTTATTGGATTTCACTTCTTCGTATTGGATTCTTCTTGTTTTTTATTGCACAACCTTTCGATTTACTAAAACTTGGAGTAAACATCCATGATTTTGTTTACCTTACTGATTGAAGCCACAGGAAATGGACCAAGTACTCCTCAGAGGATCAATTCAAATGCTGGCCCAAAGACTAATTCGGTTAGCTCAGTAACAGTACCTAGTGCAGTGGTACCAAAGAGAAACTCTGTGAAGGTTACTTCAGCATTCAACAACCCAATCTTCAATAAATCAGACGTGATACCTGTAATTGTACCCAGGACAAGTTCAAGGCACGAGCACGACGATTCTAGAAAGGATTTTGATGTTGCTGGAAGAGCAGTGGCAGTACCCAGGACAAATTCAAGGCACGAGCAGGATGATTCTAGAAAAGAATTTGATGTTTCTGGAAGAACAACACCACTACCCAGGACAAATTCAAGGAATGAGCAGGATGATTCTAGAAAGGAATTTGATGGTGCTGGAAGAGCAGTTCGAGTACCATTGCTATCGAAAACTACTGATAATAGGAGGTTTCCAAATGGTAGAGACGAAGTGGATAACCCAATTATCTCCGTCCTTTCTGAATCCAGAGGTTTGAAGGCCAATGATATGGGCACCATTGCAGATAATAGGAATTCCTTGCATGGTATTGGTTCAATTCAATGACTATCTGCTCCACAGAAGATTCCTTGCATCTTTACGTTATTTATATGCAGTTTTTTTCTTTTTATTACTCTGCTCTCATGCTTCTGTGTTACTTCTCTTTGTTCTAGATGAATCTCGAGGGCGTAAACTAAGCCGGGACACATCTTTTCCCGAAGCGACAAAAGGAGGTATTGTCATACTTAGATCTTGTTTGTTTTTTTTTTCTTCCTTGACTACAAATAGTGCCTTAACAATTTTTATTTTGGTAATATATGTAGGGAGAATACGTTCTCATGTAGATTGGGAGAAAAGAGAGAGATCTAATTTTAGCCGGTTGACATACAATGCCTCCGCTGGAAGAGCAGCTGCACTGGAAAATCTTCCATTAAATAACGGGGTATGAACTCATTTGAATGCTTACCCTTTTTGTTGTTCATAATTCGTATATTCAATCTGCTTGCACTTTTGTTCTCTTCCTTAATCTGATGTTTTGACAGAGAGATTATCATCGATCTCCCGAGAAAGAAACAGTAGCACCTGCAAGCGATGAGCATACCATAGAAAATGTTCTACAACAACATGATCAGTTTGTCAACTCGATGCAATCTCGGTCAGCAAAATTACAAGTAATGAGAACTTTCTACTCTTAACTGCTGCGTGCGTACATTTGCAAAAAAGATTTAATTCTTATTTTATACATTTATCATGGTACATAATAAGTTAAACTGTTTTTTAATTTTCAAATTTCAAACTTGGTCTTTAAAACTTTTGAATTTTTTAAAATCCACAGATCTACTAGAAATTCGTTTAGTGTTTTATTAGATATAAAATTCAAATTTATATTTATTTTATAGGTAGATTATTTCTTTAAACAAATGTGAATTTGAGTTGAGACACCTATTAAGCAAGCTTATTATAATTTAAGCTAGAGAATATTATAAAATATGATATTCTTTTGTTAATCTTTTATTAGCATTTTTTATGGAACATAAATAGATAGAGTTTTTTCTAAAAATAACCTTTTCATTTAGAGAACTACATGAGTTGACATTAGGGTAGAGTCTTGTTTAAAGCGTAAAAGGGATTATGGCTCATTGAGGCACTTGCGCGTTGGGTGGTAATTATGATCGCTTCAGTTGCTATCTGTTATTGTTCGATTTTTTTAAAAATAATGCATTTGATTCTTCTTTTCTAGGCCGTGTATAGATATTGGGAAAGGCATGACATCAAAGGGGCGGTTTCTGCAATGGAAAAAATGGCCGATCATGCGGTAACTATAATTTTTATTTTTATTATAATTATAATAATCATTATTTTAAACATGGGTTCCCGTGGATGCAGGTTGCCGCCGATGTAATTAGTATTTTGACAAATAGAATTGAAGTTGTCACTCTGGATATCTGCAGTTGTATTCTCCCACTTCTTTCTGGCCTCCTTGAAAGTGACTTGGACAGGTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACAAGAGGTCGTCGGCTAATTTCCATGTTTTGATAAATAAAAAAAACTTTATGGTTTGTGTTATTTTGGAAAACTTATTTTGAAGTTAAACTCTTGACATCTACCTAGGGGTTCCGTTTTGATATCTTTTGAAATTAAGCTTATAAACTACTTCTATCTATAGGCTTTCTTTTGTTTTTTGTAATCTTACTTCCTAAAAAGATTCAAATATTTCTTAAGAAATGTGAAAAGAGCCTTAAAGAAAGTGTGAGAAAACAAAAACAGGATGTAACTATTCTGTTTCATCTGTGGAACAATAGGTTTTTAGACATTTCTATGGAAATGCTAGTGAAGCTGGTGAGGACATTTGGGTCAGTGATCTATTCAACGTTATCGGCAACATCATCTGTTGGCGTGAACATTGAGGCGGAGCAAAGGTGTGTGTGTTCACTAATAAGCTTTTCATCATCATCATCCCCAGATTGCTCTTACACTTTATTTTTGAATTAAATTGAGCGTTTTATTGGTAGGTTGGAGCGGTGTAATATCTGCTTCATCGAGCTTGAAAAAGTCAAGCGCTGCCTGCCAGCTCTTATAAGGTACTCTAATTATATGAACTATCTTAGTTTAGGTAAGCAGAGTTTCCAAGTAATTCGAGGAGAAGCAGTAATTATGTGTTATTTGGGCGCAGAAAAAGGGGATCGGTAGCAAAGTCAGCACAGGAGTTGAATCTTGCACTGCAGGAGTTTCAATGATTGTGGGGATTGAAAGTATAGTACTAAGTAAAAAGGAAAGTAGAGGCAGTATATTGACGACGCGAGACTGACTAATTCTGCACATACCTCGAAACATACACACAAAAAAGAAGGGCTAACTAACTGTGTAGCAGCAGGGAATTGAGTGAGTTGCCATTACCACCCTGACCTGACCTGACCGACCCTTTCTTTCTTATGGCTAACCCTCCTACCACCCTCCCTTTTCCCCTAAATGTTGTACACCATTATTACCACTTTGTTTCTGAATATTATCAAAACTACTCGTTGTCTTTGGTTCTTTCTTGTAATATCACACACATCCAATTCATTATATTTTAAACTTATTTCTGCTGCTTGCTTGCTTGTCCAAACT

mRNA sequence

ATTAGTTGGCGGAGGGAGAGGGAACACAAAACGTGAAAGCTCTCTTCTCTGATCAAATCCATTTGTTTTTTTTTTATTTTTTTATTTTGAAATTGAGTTTAGGCCTTCTGTCCTTCTCTGTCCCTCTCTGTAAGAGCTTTTGCTTCGGCGGGATATGGTTATGGCGGTGCTGCTGTAGGTGGAAGAAAGCGAAGTGATTATTGACGCCGCTGCCGCCGCCTCCGCCGGCGTCTCTGAACTTTGACCGACGCCTTAAACTTGGAATTTCTCGTTTCAAATACTTGACGATATTTTAGGCTGGGAGCGGTGGTGGAAGAATTGGTGGAGTTTGCTTTTGAGATCTAAGGTGTTGTGAGTGGAGATCGTCAGTTCTTGGAAATTGTTGATGAAGCAGTGTCTCTAATTATTGCGCTATTCTCGGATTCAAATACTTCGGGAATGTGCACAGTGGAATGCCTCTCAATTCCGATTTCTAGGTTTCCTTCGCGTTCTGATGCTGTTGTTGGTCTAAATTCCTGATTATACATGCCATGACTACCAAACGGGCGTACAAGCTACAAGAATTTGTGGCACATTCTTCCACTGTCAATTGCCTGAAGATTGGAAGGAAGTCATCCCGTGTTCTTGTCACAGGAGGGGAAGACTTCAAAGTCAATCTCTGGGCTATTGGTAAACCCAACGCCATACTGAGTTTGACTGGCCATACAAGCGGAATAGATTCCGTAAGCTTTGACTCATCAGAAGTGTTGGTAGCTGCAGGGGCAGCTAGTGGCACCATCAAGCTTTGGGATTTGGAGGAGGCTAAAATTGTTCGAACACTTACGGGGCATAGATCGAATTGCATTTCTGTGGATTTTCATCCCTTTGGGGAATTCTTTGCTTCTGGGTCCTCGGATACGAATCTTAAGATATGGGATATCAGAAAGAAAGGGTGTATCCACACATACAAAGGACACACTCGAGGAGTCAATGCAATCAGATTTACTCCCGATGGCCGTTGGGTTGTATCTGGTGGAGAAGACAACACAGTGAAGCTCTGGGATTTAACGGCTGGAAAGTTGTTGCATGATTTCAAATCCCACGAGGGTCCGATTCAGTGTATAGACTTTCACCCTCATGAATTTTTGCTGGCAACAGGTTCAGCAGATAAAGCGGTTAAATTTTGGGACCTAGAAACCTTTGAGTTGATTGGTTCAGCTGGACCTGAGACCACTGGTGTCCGTTGTTTAACTTTTAATCCTGATGGGAGGACACTGCTTTGCGGATTGCATGAAAATTTGAAGGTTTTCTCATGGGAACCAATAAGATGTCATGACGGTGTGGAAGTCGGTTGGTCCAGGCTGTCCGATCTTACTGTTCATGAGGGGAAACTTCTTGGGTGTTCATACAATCAGAGCTGTGTTGGAGTGTGGGTTGTAGACATTACGCGCACAGAACCCTATGCAATTAATAATGTTAACAGACTAAATGGTCGATTAGAGCCTAAATCCAGCAGTAATCTACCACTGCAAAATGAAAGCAATGCCAAGGCTGGTTTTGGTGGATTGTCAGTATCACAAACTTCTGAACCACAACTGAAGGAAACCAAAACATCGGGAAGGTTGTCAGTTTCACAAAATTTAGACGTTGTCAAGGATCCAAAATCTTTGTCATCCACAGGAAATGGACCAAGTACTCCTCAGAGGATCAATTCAAATGCTGGCCCAAAGACTAATTCGGTTAGCTCAGTAACAGTACCTAGTGCAGTGGTACCAAAGAGAAACTCTGTGAAGGTTACTTCAGCATTCAACAACCCAATCTTCAATAAATCAGACGTGATACCTGTAATTGTACCCAGGACAAGTTCAAGGCACGAGCACGACGATTCTAGAAAGGATTTTGATGTTGCTGGAAGAGCAGTGGCAGTACCCAGGACAAATTCAAGGCACGAGCAGGATGATTCTAGAAAAGAATTTGATGTTTCTGGAAGAACAACACCACTACCCAGGACAAATTCAAGGAATGAGCAGGATGATTCTAGAAAGGAATTTGATGGTGCTGGAAGAGCAGTTCGAGTACCATTGCTATCGAAAACTACTGATAATAGGAGGTTTCCAAATGGTAGAGACGAAGTGGATAACCCAATTATCTCCGTCCTTTCTGAATCCAGAGGTTTGAAGGCCAATGATATGGGCACCATTGCAGATAATAGGAATTCCTTGCATGATGAATCTCGAGGGCGTAAACTAAGCCGGGACACATCTTTTCCCGAAGCGACAAAAGGAGGGAGAATACGTTCTCATGTAGATTGGGAGAAAAGAGAGAGATCTAATTTTAGCCGGTTGACATACAATGCCTCCGCTGGAAGAGCAGCTGCACTGGAAAATCTTCCATTAAATAACGGGAGAGATTATCATCGATCTCCCGAGAAAGAAACAGTAGCACCTGCAAGCGATGAGCATACCATAGAAAATGTTCTACAACAACATGATCAGTTTGTCAACTCGATGCAATCTCGGTCAGCAAAATTACAAGCCGTGTATAGATATTGGGAAAGGCATGACATCAAAGGGGCGGTTTCTGCAATGGAAAAAATGGCCGATCATGCGGTTGCCGCCGATGTAATTAGTATTTTGACAAATAGAATTGAAGTTGTCACTCTGGATATCTGCAGTTGTATTCTCCCACTTCTTTCTGGCCTCCTTGAAAGTGACTTGGACAGGTTTTTAGACATTTCTATGGAAATGCTAGTGAAGCTGGTGAGGACATTTGGGTCAGTGATCTATTCAACGTTATCGGCAACATCATCTGTTGGCGTGAACATTGAGGCGGAGCAAAGGTTGGAGCGGTGTAATATCTGCTTCATCGAGCTTGAAAAAGTCAAGCGCTGCCTGCCAGCTCTTATAAGAAAAAGGGGATCGGTAGCAAAGTCAGCACAGGAGTTGAATCTTGCACTGCAGGAGTTTCAATGATTGTGGGGATTGAAAGTATAGTACTAAGTAAAAAGGAAAGTAGAGGCAGTATATTGACGACGCGAGACTGACTAATTCTGCACATACCTCGAAACATACACACAAAAAAGAAGGGCTAACTAACTGTGTAGCAGCAGGGAATTGAGTGAGTTGCCATTACCACCCTGACCTGACCTGACCGACCCTTTCTTTCTTATGGCTAACCCTCCTACCACCCTCCCTTTTCCCCTAAATGTTGTACACCATTATTACCACTTTGTTTCTGAATATTATCAAAACTACTCGTTGTCTTTGGTTCTTTCTTGTAATATCACACACATCCAATTCATTATATTTTAAACTTATTTCTGCTGCTTGCTTGCTTGTCCAAACT

Coding sequence (CDS)

ATGACTACCAAACGGGCGTACAAGCTACAAGAATTTGTGGCACATTCTTCCACTGTCAATTGCCTGAAGATTGGAAGGAAGTCATCCCGTGTTCTTGTCACAGGAGGGGAAGACTTCAAAGTCAATCTCTGGGCTATTGGTAAACCCAACGCCATACTGAGTTTGACTGGCCATACAAGCGGAATAGATTCCGTAAGCTTTGACTCATCAGAAGTGTTGGTAGCTGCAGGGGCAGCTAGTGGCACCATCAAGCTTTGGGATTTGGAGGAGGCTAAAATTGTTCGAACACTTACGGGGCATAGATCGAATTGCATTTCTGTGGATTTTCATCCCTTTGGGGAATTCTTTGCTTCTGGGTCCTCGGATACGAATCTTAAGATATGGGATATCAGAAAGAAAGGGTGTATCCACACATACAAAGGACACACTCGAGGAGTCAATGCAATCAGATTTACTCCCGATGGCCGTTGGGTTGTATCTGGTGGAGAAGACAACACAGTGAAGCTCTGGGATTTAACGGCTGGAAAGTTGTTGCATGATTTCAAATCCCACGAGGGTCCGATTCAGTGTATAGACTTTCACCCTCATGAATTTTTGCTGGCAACAGGTTCAGCAGATAAAGCGGTTAAATTTTGGGACCTAGAAACCTTTGAGTTGATTGGTTCAGCTGGACCTGAGACCACTGGTGTCCGTTGTTTAACTTTTAATCCTGATGGGAGGACACTGCTTTGCGGATTGCATGAAAATTTGAAGGTTTTCTCATGGGAACCAATAAGATGTCATGACGGTGTGGAAGTCGGTTGGTCCAGGCTGTCCGATCTTACTGTTCATGAGGGGAAACTTCTTGGGTGTTCATACAATCAGAGCTGTGTTGGAGTGTGGGTTGTAGACATTACGCGCACAGAACCCTATGCAATTAATAATGTTAACAGACTAAATGGTCGATTAGAGCCTAAATCCAGCAGTAATCTACCACTGCAAAATGAAAGCAATGCCAAGGCTGGTTTTGGTGGATTGTCAGTATCACAAACTTCTGAACCACAACTGAAGGAAACCAAAACATCGGGAAGGTTGTCAGTTTCACAAAATTTAGACGTTGTCAAGGATCCAAAATCTTTGTCATCCACAGGAAATGGACCAAGTACTCCTCAGAGGATCAATTCAAATGCTGGCCCAAAGACTAATTCGGTTAGCTCAGTAACAGTACCTAGTGCAGTGGTACCAAAGAGAAACTCTGTGAAGGTTACTTCAGCATTCAACAACCCAATCTTCAATAAATCAGACGTGATACCTGTAATTGTACCCAGGACAAGTTCAAGGCACGAGCACGACGATTCTAGAAAGGATTTTGATGTTGCTGGAAGAGCAGTGGCAGTACCCAGGACAAATTCAAGGCACGAGCAGGATGATTCTAGAAAAGAATTTGATGTTTCTGGAAGAACAACACCACTACCCAGGACAAATTCAAGGAATGAGCAGGATGATTCTAGAAAGGAATTTGATGGTGCTGGAAGAGCAGTTCGAGTACCATTGCTATCGAAAACTACTGATAATAGGAGGTTTCCAAATGGTAGAGACGAAGTGGATAACCCAATTATCTCCGTCCTTTCTGAATCCAGAGGTTTGAAGGCCAATGATATGGGCACCATTGCAGATAATAGGAATTCCTTGCATGATGAATCTCGAGGGCGTAAACTAAGCCGGGACACATCTTTTCCCGAAGCGACAAAAGGAGGGAGAATACGTTCTCATGTAGATTGGGAGAAAAGAGAGAGATCTAATTTTAGCCGGTTGACATACAATGCCTCCGCTGGAAGAGCAGCTGCACTGGAAAATCTTCCATTAAATAACGGGAGAGATTATCATCGATCTCCCGAGAAAGAAACAGTAGCACCTGCAAGCGATGAGCATACCATAGAAAATGTTCTACAACAACATGATCAGTTTGTCAACTCGATGCAATCTCGGTCAGCAAAATTACAAGCCGTGTATAGATATTGGGAAAGGCATGACATCAAAGGGGCGGTTTCTGCAATGGAAAAAATGGCCGATCATGCGGTTGCCGCCGATGTAATTAGTATTTTGACAAATAGAATTGAAGTTGTCACTCTGGATATCTGCAGTTGTATTCTCCCACTTCTTTCTGGCCTCCTTGAAAGTGACTTGGACAGGTTTTTAGACATTTCTATGGAAATGCTAGTGAAGCTGGTGAGGACATTTGGGTCAGTGATCTATTCAACGTTATCGGCAACATCATCTGTTGGCGTGAACATTGAGGCGGAGCAAAGGTTGGAGCGGTGTAATATCTGCTTCATCGAGCTTGAAAAAGTCAAGCGCTGCCTGCCAGCTCTTATAAGAAAAAGGGGATCGGTAGCAAAGTCAGCACAGGAGTTGAATCTTGCACTGCAGGAGTTTCAATGA

Protein sequence

MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSSDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGRTLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITRTEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSVSQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFNNPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGRTTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESRGLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTYNASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLESDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRCLPALIRKRGSVAKSAQELNLALQEFQ

Homology

[Close]

BLAST of CmoCh04G013480 vs. ExPASy Swiss-Prot
Match: Q8H0T9 (Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 OS=Arabidopsis thaliana OX=3702 GN=KTN80.4 PE=1 SV=3)

HSP 1 Score: 856.7 bits (2212), Expect = 2.1e-247
Identity = 483/886 (54.51%), Postives = 589/886 (66.48%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHS+ VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRWVVSGGEDN VK+WDLTAGKLL +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEG IQ +DFHPHEFLLATGSAD+ VKFWDLETFELIGS GPET GVRCL+FNPDG+
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           T+LCGL E+LK+FSWEPIRCHDGV+VGWSRLSD+ VHEGKLLGCSYNQSCVGVWVVD++R
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLP--LQNESNAKAGFGGLSVSQTSEPQLKETKT---- 360
           TEP    +  + NG  E +S S     + N++N+K   G LSVSQ  +P LKETK+    
Sbjct: 301 TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL 360

Query: 361 ----------------------------------SGRLSVSQNLDVVKDPKSLSSTGNGP 420
                                              GRLSVSQN DV K+ ++ SSTG+ P
Sbjct: 361 SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP 420

Query: 421 STPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFNNPIFNKSDVIPVIVPRTSSR 480
            TP R++S    K  S  S  V +A   +RN  K      NP+   +D  PVIVPR   R
Sbjct: 421 GTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANPK-ANPVNKAADFAPVIVPRADPR 480

Query: 481 HEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGRTTPLPRTNSRNEQDDSRKEF 540
            E                        +  +SR E D+  RT                   
Sbjct: 481 IE------------------------QATESRAELDIIART------------------- 540

Query: 541 DGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVL--SESRGLKAN---DMGTI----- 600
                   +P   +  D+RR P+ R+  D P  SVL  SES+ ++ N   D GT+     
Sbjct: 541 --------MPYSLQAADSRRSPSSRNNPDLPDASVLEMSESQPVEPNNIPDGGTLPGGKV 600

Query: 601 --------------------ADNRNSL------HDESR---GRKLSRDTSFPEATKGGRI 660
                               +++R+ +      HDE+      + +RD S  E+ KGGR 
Sbjct: 601 GMRGATERSINDFRYKRYGRSNSRSRMGSPPRNHDENYDLVSHRSNRDPSPTESQKGGRF 660

Query: 661 RSHV-DWEKRER-SNFSRLTYNASAGRAAALENLPLNNGRDY-HRSPEKETVAPASDEHT 720
           +S V + E+R R SNF     N S+G   A    P N  +   +  P ++ +   S+E+ 
Sbjct: 661 QSLVINRERRGRFSNFEGPVSNFSSGNMPAPNIRPSNMFKQRGNHMPVEQGIDSPSEENI 720

Query: 721 IENVLQQHDQFVNSMQSRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNR 780
           +E+++ +H+QFV+SMQSR AKLQ V RYWER+D+K ++ ++EKMAD+AV ADV+ I+T R
Sbjct: 721 VEDIMGKHNQFVSSMQSRLAKLQVVRRYWERNDVKNSIGSIEKMADNAVTADVLGIITER 780

Query: 781 IEVVTLDICSCILPLLSGLLESDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNI 805
            E++TLD C+ +LPLL+ LL S +D+ L +S+++L+KLVR +GS IYS+LSA +SVGV+I
Sbjct: 781 NEILTLDNCTSLLPLLTALLGSGMDQHLSVSLDLLLKLVRLYGSPIYSSLSAPASVGVDI 834

[Close]

BLAST of CmoCh04G013480 vs. ExPASy Swiss-Prot
Match: F4KB17 (Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3 OS=Arabidopsis thaliana OX=3702 GN=KTN80.3 PE=1 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 1.4e-243
Identity = 472/886 (53.27%), Postives = 573/886 (64.67%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           M TKRAYKLQEFVAHS+ VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MNTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SE LVAAGAASGTIKLWDLEEAK+VRTLTGHRSNC+SV+FHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRW+VSGGEDN VK+WDLTAGKLLH+
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEG IQ +DFHPHEFLLATGSADK VKFWDLETFELIGS G ETTGVRCLTFNPDG+
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           ++LCGL E+LK+FSWEPIRCHDGV+VGWS LSD+ VHEGKLLGCSYNQ+CVGVWVVD++R
Sbjct: 241 SVLCGLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQ--NESNAKAGFGGLSVSQTSEPQLKETKTSGRL 360
           TEP +     + N   E  S S       N++++K   G L  SQ  +P LKETK+ G+L
Sbjct: 301 TEPMS-GGATQSNSHPEKTSGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKL 360

Query: 361 SVSQNLD--------------------VVKDPK------------------SLSSTGNGP 420
           SVSQN D                    +VK+PK                  +LSSTG+  
Sbjct: 361 SVSQNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSSTGSVS 420

Query: 421 STPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFNNPIFNKSDVIPVIVPRTSSR 480
            +P R+   + PK+ S  S  VP+A   KRN  K     N P+ NK D  PVIVPRT   
Sbjct: 421 DSPHRVTLTSAPKSASGISTVVPNAAASKRNFGKANPKANPPVVNKEDYFPVIVPRTEPI 480

Query: 481 HEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGRTTPLPRTNSRNEQDDSRKEF 540
            E                        +  +SR E D+ GRT P                 
Sbjct: 481 IE------------------------QASESRAELDIIGRTMP----------------- 540

Query: 541 DGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR------------GLKANDMG 600
                     L SK  D+RR  + R+E D P  S+L  S+                +D G
Sbjct: 541 --------YSLQSKAADSRRLSSSRNEPDLPTSSLLERSQSQPIEPITLQDGNTYPSDEG 600

Query: 601 TIADNRNSLHDESRGR---------------------------KLSRDTSFPEATKGGRI 660
              D     + ES+ R                             +RD+S  E+ KGGR+
Sbjct: 601 GSWDTAERTNKESKCRVFGRFNSRSLVRSPPRNHDENSDLISYNANRDSSPTESRKGGRL 660

Query: 661 RSHV-DWEKRER-SNFSRLTYNASAGRAAALENLPLNNGRDY-HRSPEKETVAPASDEHT 720
            S V + E+R R SNF     ++S G   A  + P N  +   +  P  + +  AS+E  
Sbjct: 661 HSLVLNRERRGRFSNFEGPVSSSSGGNMTAPNSRPSNMLKQRGNHVPVDQGITSASEEDI 720

Query: 721 IENVLQQHDQFVNSMQSRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNR 780
           + +++ QHDQFV+SM SR AKLQ V RYWER+DIK ++S++EKMAD+AV ADV+ I+  R
Sbjct: 721 VADIMGQHDQFVSSMHSRLAKLQVVRRYWERNDIKNSISSIEKMADNAVIADVLLIVNER 780

Query: 781 IEVVTLDICSCILPLLSGLLESDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNI 805
            E++TLD C+ +LPLL+ LL S++D  L + +++L+KLVR +GS IYS+LSA SSVGV+I
Sbjct: 781 PEILTLDTCTSLLPLLTALLGSNMDSHLSVCLDLLLKLVRMYGSQIYSSLSAPSSVGVDI 836

[Close]

BLAST of CmoCh04G013480 vs. ExPASy Swiss-Prot
Match: A0A1P8AW69 (Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 OS=Arabidopsis thaliana OX=3702 GN=KTN80.1 PE=1 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 9.6e-163
Identity = 381/1022 (37.28%), Postives = 526/1022 (51.47%), Query Frame = 0


Query: 4    KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
            KR YKLQEFVAHS  VNCL IG+K+SR+L+TGG+D+KVNLW+IGK  + +SL GHTS +D
Sbjct: 3    KRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVD 62

Query: 64   SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSSDT 123
            SV+F+S EVLV AGA+SG IKLWDLEE+K+VR  TGHRSNC +V+FHPFGEF ASGSSDT
Sbjct: 63   SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122

Query: 124  NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKS 183
            NL++WD RKKGCI TYKGHTRG++ I F+PDGRWVVSGG DN VK+WDLTAGKLLH+FK 
Sbjct: 123  NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 182

Query: 184  HEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGRTLL 243
            HEGPI+ +DFHP EFLLATGSAD+ VKFWDLETFELIG+  PE TGVR + F+PDG+TL 
Sbjct: 183  HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242

Query: 244  CGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITRTEP 303
            CGL + LKV+SWEP+ C DGV++GWS L D  ++EGK +GCSY ++ VG+WV DI+  EP
Sbjct: 243  CGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSDISELEP 302

Query: 304  YA----------INNVNRLNGRLE-----PKSSSNLPLQNE--SNAKAGFGGLSVSQT-- 363
            Y           +   + LN + E     P+ S +   +     N     G L+V+Q   
Sbjct: 303  YGAVSEDKNECMVKRFSVLNDQSERMGSGPRGSVSPDYETREIKNIYVDCGNLNVAQNPG 362

Query: 364  ---SEPQLKETKTSGRLSVSQNL-------DVVKDPKSLSSTGNGPS------------- 423
               +   L+  K +  +S  QN        D        S +G   S             
Sbjct: 363  SLKATLPLESGKVATMVSEKQNAAYFGPAGDKYSSTSRDSDSGEESSYSERESIPFSRTK 422

Query: 424  -----TPQRINSNAGPKTNSVSSVTVPSAV------------------VPKRNSVK---- 483
                  P  +         S  S  V SA                   + ++N+ K    
Sbjct: 423  SGMLLRPAHVRKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNAFLSEQNASKPFDA 482

Query: 484  -------VTSAF-----NNPIFNKSDVIPVIVPR--TSSRHEHDDSRKDF---------- 543
                   +T+ F     + P  ++++ + +  PR   SS  +++D+R+            
Sbjct: 483  EDSIIKGITNKFEKALSSEPPTDEANRMFLKPPRIHRSSNSKYNDTRRAMSADPATFGKG 542

Query: 544  ------DVAGRAVAVPRTNSRHEQDDSRKEFD-------------------VSGRTTPLP 603
                  DV        R  SR +  D +K  +                   VSGRT  L 
Sbjct: 543  GMENSGDVEDIPSKTERVLSREKPGDEQKNTEYPSGSRELNPVKIVEGVNVVSGRTRSLV 602

Query: 604  RTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESRGLKAN 663
                R E+       +GA   +     +   D R+    R   + P+IS    +R   A 
Sbjct: 603  EKFERGEK---TTHTEGASTTIEQNNNAVQEDPRK--TSRQTGETPVIST-RRARSTPAR 662

Query: 664  DMGTIAD-NRNSLHDESRGRKLSRDTSFP-------EATKGGRIRSHVDWEKRERSNFSR 723
             M  + + + N   DE    + +R +SFP       +A+        V   +  R++ +R
Sbjct: 663  VMPIVLNRDSNVTSDEPPLTQPARTSSFPVMPVILNQASNVTYDEPSVALTQESRTSHAR 722

Query: 724  L---TYNA-------------------SAGRA-------AALENLPLNNGRDYHRSP--- 783
            +   T+N                    SA R        A     P+ + R    SP   
Sbjct: 723  ILPVTFNQATNITSEEASVTLRRQRRNSAARVRPVLLSQATSHECPVTSVRPLRTSPARV 782

Query: 784  ------------------------------------------------------------ 805
                                                                        
Sbjct: 783  MPTKLNQSVNMTSDTSHIASMHRVSPTQMLATPTVIDQVADMTLDETHATQIQPACDNMP 842

[Close]

BLAST of CmoCh04G013480 vs. ExPASy Swiss-Prot
Match: F4HTH8 (Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2 OS=Arabidopsis thaliana OX=3702 GN=KTN80.2 PE=1 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 6.9e-153
Identity = 400/1183 (33.81%), Postives = 554/1183 (46.83%), Query Frame = 0


Query: 4    KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
            KR YKLQEF+AHS+ VNCL IG+K+SR+ +TGG+D+KVNLWAIGKP +++SL GHTS +D
Sbjct: 3    KRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVD 62

Query: 64   SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSSDT 123
            SV+FDS+EVLV AGA+SG IKLWD+EEAK+VR  TGHRSNC +V+FHPFGEF ASGSSD 
Sbjct: 63   SVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDA 122

Query: 124  NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKS 183
            NLKIWDIRKKGCI TYKGH+RG++ IRFTPDGRWVVSGG DN VK+WDLTAGKLLH+FK 
Sbjct: 123  NLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKF 182

Query: 184  HEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGRTLL 243
            HEGPI+ +DFHP EFLLATGSAD+ VKFWDLETFELIGS  PE TGVR + F+PDGRTL 
Sbjct: 183  HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLF 242

Query: 244  CGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITRTEP 303
            CGL ++LKV+SWEP+ CHDGV++GWS L DL + EGKLLGCSY Q+ VG+WV DI++ EP
Sbjct: 243  CGLDDSLKVYSWEPVVCHDGVDMGWSTLGDLCISEGKLLGCSYYQNSVGIWVSDISQIEP 302

Query: 304  YAINN------VNRLNGRLEPKSSSNLPLQNESNAKAGF--------------------- 363
            Y I +      V ++   L+ +S   +      ++   +                     
Sbjct: 303  YGIGSADKKECVEKILSALDDQSFDRIKSTPRRSSSPDYETKEIKNIYIDSTGGNSAVAH 362

Query: 364  --GGLSVSQTSEPQL-------------------KETKTSGRLSVS-------------- 423
              G LS   TS  Q                    K++  SG+ S++              
Sbjct: 363  KSGSLSTPATSTGQAGDNKSLVVHSVVPRDSDIGKDSSDSGKESITFSKTKPGMLLRPAY 422

Query: 424  -----------------------------QNLD--------------------------- 483
                                         + LD                           
Sbjct: 423  VRKTPTKFDETKKQSVAVGYLKKSGLDGEKKLDTETAFDSEMSGRNPYDADDSIIKSITN 482

Query: 484  ------------------VVKDP------------------------------------- 543
                              ++K P                                     
Sbjct: 483  KFEQALLPESPTDEAKCMLLKPPRVQRSPSTKYNEARWATSTDSGALDSKKNGLESSRDM 542

Query: 544  ---------------------KSLSSTGNGPSTPQR-------INSNAG----------- 603
                                 KS+SS      +P++       + S  G           
Sbjct: 543  DLPTGLRDDRGSNPCEEDIENKSISSRSERVLSPEKAGDELKSLESPGGSKESKSVKVVR 602

Query: 604  --------------------------------------------PKTNSVSSVT-VPSAV 663
                                                        P T SV +V+ +P+ V
Sbjct: 603  GVKVVSGRTRSLVERFERGEKITHSEDKAASATVVHSSNSVEEEPLTASVQTVSMMPTQV 662

Query: 664  VPKR-----NSVKVTSAFNNPIFNKSD---VIPVIV-----------PRTSSRHEHDDSR 723
            +P +     NS  V     +    KS    V+PV++           P TS+R +   + 
Sbjct: 663  MPVKLDQATNSTTVDVPVLSTRRTKSTPVRVMPVVLGRDTSMATDTPPVTSTRPDRTSAT 722

Query: 724  K-DFDVAG-------RAVAVP--------RTNSRHEQDDSRKEF-----------DVSG- 783
                DV+G       R    P         T  + ++      +           DVSG 
Sbjct: 723  NLTSDVSGVTSKRQTRTSPAPVMPMILNQTTKMKSDEPSITSTWPDRTSATDLTSDVSGV 782

Query: 784  ------RTTPLP--------RTNSRNEQ------------------DDSRKEFDGAGRAV 804
                  RT+P P        +T  ++++                  D+S        +  
Sbjct: 783  ISSRQTRTSPAPVMPMKLNQKTKIKSDEPPITSTRPDRPSATNLTSDESPVTSTRQAKTS 842

[Close]

BLAST of CmoCh04G013480 vs. ExPASy Swiss-Prot
Match: O61585 (Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus purpuratus OX=7668 GN=KATNB1 PE=1 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 9.1e-113
Identity = 179/300 (59.67%), Postives = 234/300 (78.00%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           M TKRA+KLQE VAHSS VNCL +G  S RV+VTGGED KVNLWA+GK N I+SL+GHTS
Sbjct: 1   MATKRAWKLQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
            +DSV F+SSE LV AG+ SGT+K++DLE AKIVRTLTGHR++   +DFHPFGEF ASGS
Sbjct: 61  PVDSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           +DTN+K+WD+R+KGCI+TYKGH+  VN I+F+PDG+W+V+  ED T+KLWDLT GKL  +
Sbjct: 121 TDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQE 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FK+H G +  I+FHP+EFLLA+GS+D+ V+FWDLETF+L+ S  P  + VR ++F+PDG 
Sbjct: 181 FKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSISFHPDGS 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
            L C   + L  F WEPIRC D   VGW +++D  +   +L+G S+N + V V+V D++R
Sbjct: 241 YLFCSSQDMLHAFGWEPIRCFDTFSVGWGKVADTVIASTQLIGASFNATNVSVYVADLSR 300

[Close]

BLAST of CmoCh04G013480 vs. ExPASy TrEMBL
Match: A0A6J1GY50 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111458532 PE=3 SV=1)

HSP 1 Score: 1602.8 bits (4149), Expect = 0.0e+00
Identity = 806/806 (100.00%), Postives = 806/806 (100.00%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
Sbjct: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360
           TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV
Sbjct: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360

Query: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420
           SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN
Sbjct: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480
           NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480

Query: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540
           TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR
Sbjct: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540

Query: 541 GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY 600
           GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY
Sbjct: 541 GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY 600

Query: 601 NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL 660
           NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL
Sbjct: 601 NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL 660

Query: 661 QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES 720
           QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES
Sbjct: 661 QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES 720

Query: 721 DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC 780
           DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC
Sbjct: 721 DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC 780

Query: 781 LPALIRKRGSVAKSAQELNLALQEFQ 807
           LPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 781 LPALIRKRGSVAKSAQELNLALQEFQ 806

[Close]

BLAST of CmoCh04G013480 vs. ExPASy TrEMBL
Match: A0A6J1K9I2 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493491 PE=3 SV=1)

HSP 1 Score: 1505.0 bits (3895), Expect = 0.0e+00
Identity = 767/807 (95.04%), Postives = 770/807 (95.42%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
Sbjct: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHENLKVFSWEPIRCHD VEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHENLKVFSWEPIRCHDSVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360
           TEPYAINNVNRLNGR EPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV
Sbjct: 301 TEPYAINNVNRLNGRSEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360

Query: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420
           SQ+ DVVKDPKSLSSTGNGP+TPQRIN NAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN
Sbjct: 361 SQSSDVVKDPKSLSSTGNGPNTPQRINLNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480
           NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVA                         GR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVA-------------------------GR 480

Query: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRR-FPNGRDEVDNPIISVLSES 540
           TTPLPRTNSRNEQDDSRKEFD AGR VRVPLLSKTTDNRR FPN RDEVDN  ISVLSES
Sbjct: 481 TTPLPRTNSRNEQDDSRKEFDVAGRTVRVPLLSKTTDNRRLFPNVRDEVDNTTISVLSES 540

Query: 541 RGLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLT 600
           RGLKANDMGTIADNRNSLHDESRGRKLSRDTSFPE TKGGRIRSHVDWEKRERSNFSRLT
Sbjct: 541 RGLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEVTKGGRIRSHVDWEKRERSNFSRLT 600

Query: 601 YNASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAK 660
           YNASAGRAAALENLPLN GRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAK
Sbjct: 601 YNASAGRAAALENLPLNYGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAK 660

Query: 661 LQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLE 720
           LQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLE
Sbjct: 661 LQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLE 720

Query: 721 SDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKR 780
           SDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCN+CFIELEKVKR
Sbjct: 721 SDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKR 780

Query: 781 CLPALIRKRGSVAKSAQELNLALQEFQ 807
           CLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 781 CLPALIRKRGSVAKSAQELNLALQEFQ 782

[Close]

BLAST of CmoCh04G013480 vs. ExPASy TrEMBL
Match: A0A1S3BDT9 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo OX=3656 GN=LOC103488797 PE=3 SV=1)

HSP 1 Score: 1440.2 bits (3727), Expect = 0.0e+00
Identity = 734/846 (86.76%), Postives = 757/846 (89.48%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSS VNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FK HEG +QCIDFHPHEFLLATGSADK VKFWDLETFELIGSAGPET+GVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHE+LKVFSWEPIRCHDGVEVGWSRLSDL VHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360
           TEPYA+NN NRLNGR EPKSSS+  LQNE+N K GF GLSVSQTS+P LKETKT GRLSV
Sbjct: 301 TEPYAVNNANRLNGRSEPKSSSH--LQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSV 360

Query: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420
           SQN DV KDPKSLSSTGNGPSTPQ+IN NAG KTN V+S  VPSAVVPKRNSVK TS FN
Sbjct: 361 SQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480
           NPIFNKSDVIPVIVPRTSSRHE DDSRK+FDVAGRAV V RTNSRHEQDDSRKEFDV+GR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAVTVSRTNSRHEQDDSRKEFDVAGR 480

Query: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540
             PL RTNSR+EQDDSRKE D  GR V  P LSKTTDNRRFPN RDEVDN  ISVLSESR
Sbjct: 481 VMPLSRTNSRHEQDDSRKECDVTGRTVPAPSLSKTTDNRRFPNSRDEVDNSTISVLSESR 540

Query: 541 GLKANDMGTIADNRNSLH----------------------------------------DE 600
           GLKANDM  IADNRNSLH                                        DE
Sbjct: 541 GLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTANYKHEDE 600

Query: 601 SRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTYNASAGRAAALENLPLNNGRD 660
           SRG K+SRD+SFPEATKGGR+RSHVDWEKRER NFSRLTYNAS GRAAALEN+PLNNGR 
Sbjct: 601 SRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPGRAAALENIPLNNGRG 660

Query: 661 YHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKLQAVYRYWERHDIKGAVSAME 720
           Y RSPEKETV+PASDE TI NVLQQHDQFVNSMQSRSAKLQAVYR+WERHDIKGAVSAME
Sbjct: 661 YRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHWERHDIKGAVSAME 720

Query: 721 KMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLESDLDRFLDISMEMLVKLVRTF 780
           KMADHAVAADVISI+TNRIEVVTLDIC+CILP+LSGLLESDLDR+LDISMEMLVKLVRTF
Sbjct: 721 KMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRYLDISMEMLVKLVRTF 780

Query: 781 GSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRCLPALIRKRGSVAKSAQELNL 807
           GSVIYSTLSATSSVGVNIEAEQRLERCN+CFIELEKVKRCLPALIRKRGSVAKSAQELNL
Sbjct: 781 GSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRKRGSVAKSAQELNL 840

[Close]

BLAST of CmoCh04G013480 vs. ExPASy TrEMBL
Match: A0A0A0KPN4 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis sativus OX=3659 GN=Csa_5G580650 PE=3 SV=1)

HSP 1 Score: 1437.6 bits (3720), Expect = 0.0e+00
Identity = 734/846 (86.76%), Postives = 756/846 (89.36%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSS VNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FK HEG +QCIDFHPHEFLLATGSADK VKFWDLETFELIGSAGPET+GVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHE+LKVFSWEPIRCHDGVEVGWSRLSDL VHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360
           TEPYA+NN NRLNGR EPKSSS+  LQNE+N K  FGGLSVSQTS+  LKETKT GRLSV
Sbjct: 301 TEPYAVNNANRLNGRPEPKSSSH--LQNENNTKTSFGGLSVSQTSDALLKETKTLGRLSV 360

Query: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420
           SQN DV KDPKSLSSTGNGPSTPQ+IN NAG KTN VSS  VPSAVVPKRNSVK TS FN
Sbjct: 361 SQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVSSAAVPSAVVPKRNSVKATSTFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480
           NPIFNKSDVIPVIVPRTSSRHE DDSRK+FDVAGRAV V RTNSR EQDDSRKEFDV+ R
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAVPVSRTNSRQEQDDSRKEFDVAAR 480

Query: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540
             PL R+NSR+EQDDSRKE D AGRA   PLLSKTTDNRRFPN RDEVDNP ISVLSESR
Sbjct: 481 VMPLSRSNSRHEQDDSRKECDVAGRAAPAPLLSKTTDNRRFPNSRDEVDNPTISVLSESR 540

Query: 541 GLKANDMGTIADNRNSLH----------------------------------------DE 600
           GLKANDM TIADNRNSLH                                        DE
Sbjct: 541 GLKANDMSTIADNRNSLHGIGSIQGVSAPQKIVKEERYIGSGKNETETKDTTANYKHEDE 600

Query: 601 SRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTYNASAGRAAALENLPLNNGRD 660
           SRG K+SRD SFPEATKGGR+RSHVDWEKRER NFSRLTYNAS GRAAALEN+PLNNGR 
Sbjct: 601 SRGHKISRDASFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPGRAAALENIPLNNGRG 660

Query: 661 YHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKLQAVYRYWERHDIKGAVSAME 720
           Y  SPEKETV+PASDE TI NVLQQHDQFVNSMQSRSAKLQAVYR+WERHDIKGAVSAME
Sbjct: 661 YRPSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHWERHDIKGAVSAME 720

Query: 721 KMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLESDLDRFLDISMEMLVKLVRTF 780
           KMADHAVAADVISI+TNRIEVVTLDIC+CILP+LSGLLESDLDR+LDISMEMLVKLVRTF
Sbjct: 721 KMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRYLDISMEMLVKLVRTF 780

Query: 781 GSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRCLPALIRKRGSVAKSAQELNL 807
           GSVIYSTLSATSSVGVNIEAEQRLERCN+CFIELEKVKRCLPALIRKRGSVAKSAQELNL
Sbjct: 781 GSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRKRGSVAKSAQELNL 840

[Close]

BLAST of CmoCh04G013480 vs. ExPASy TrEMBL
Match: A0A1S3BDT8 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo OX=3656 GN=LOC103488797 PE=3 SV=1)

HSP 1 Score: 1426.4 bits (3691), Expect = 0.0e+00
Identity = 734/871 (84.27%), Postives = 757/871 (86.91%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSS VNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FK HEG +QCIDFHPHEFLLATGSADK VKFWDLETFELIGSAGPET+GVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHE+LKVFSWEPIRCHDGVEVGWSRLSDL VHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360
           TEPYA+NN NRLNGR EPKSSS+  LQNE+N K GF GLSVSQTS+P LKETKT GRLSV
Sbjct: 301 TEPYAVNNANRLNGRSEPKSSSH--LQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSV 360

Query: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420
           SQN DV KDPKSLSSTGNGPSTPQ+IN NAG KTN V+S  VPSAVVPKRNSVK TS FN
Sbjct: 361 SQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFN 420

Query: 421 NPIFNKSDVIPVIVPRTS-------------------------SRHEHDDSRKDFDVAGR 480
           NPIFNKSDVIPVIVPRTS                         SRHE DDSRK+FDVAGR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGR 480

Query: 481 AVAVPRTNSRHEQDDSRKEFDVSGRTTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKT 540
           AV V RTNSRHEQDDSRKEFDV+GR  PL RTNSR+EQDDSRKE D  GR V  P LSKT
Sbjct: 481 AVTVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDVTGRTVPAPSLSKT 540

Query: 541 TDNRRFPNGRDEVDNPIISVLSESRGLKANDMGTIADNRNSLH----------------- 600
           TDNRRFPN RDEVDN  ISVLSESRGLKANDM  IADNRNSLH                 
Sbjct: 541 TDNRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKE 600

Query: 601 -----------------------DESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNF 660
                                  DESRG K+SRD+SFPEATKGGR+RSHVDWEKRER NF
Sbjct: 601 ERYIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNF 660

Query: 661 SRLTYNASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQS 720
           SRLTYNAS GRAAALEN+PLNNGR Y RSPEKETV+PASDE TI NVLQQHDQFVNSMQS
Sbjct: 661 SRLTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQS 720

Query: 721 RSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLS 780
           RSAKLQAVYR+WERHDIKGAVSAMEKMADHAVAADVISI+TNRIEVVTLDIC+CILP+LS
Sbjct: 721 RSAKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLS 780

Query: 781 GLLESDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELE 807
           GLLESDLDR+LDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCN+CFIELE
Sbjct: 781 GLLESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELE 840

[Close]

BLAST of CmoCh04G013480 vs. NCBI nr
Match: XP_022957041.1 (katanin p80 WD40 repeat-containing subunit B1 homolog [Cucurbita moschata])

HSP 1 Score: 1602.8 bits (4149), Expect = 0.0e+00
Identity = 806/806 (100.00%), Postives = 806/806 (100.00%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
Sbjct: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360
           TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV
Sbjct: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360

Query: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420
           SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN
Sbjct: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480
           NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480

Query: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540
           TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR
Sbjct: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540

Query: 541 GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY 600
           GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY
Sbjct: 541 GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY 600

Query: 601 NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL 660
           NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL
Sbjct: 601 NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL 660

Query: 661 QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES 720
           QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES
Sbjct: 661 QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES 720

Query: 721 DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC 780
           DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC
Sbjct: 721 DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC 780

Query: 781 LPALIRKRGSVAKSAQELNLALQEFQ 807
           LPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 781 LPALIRKRGSVAKSAQELNLALQEFQ 806

[Close]

BLAST of CmoCh04G013480 vs. NCBI nr
Match: XP_023538621.1 (katanin p80 WD40 repeat-containing subunit B1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1593.2 bits (4124), Expect = 0.0e+00
Identity = 801/806 (99.38%), Postives = 803/806 (99.63%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSTVNCLKIG+KSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSTVNCLKIGKKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
Sbjct: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHENLKVFSWEPIRCHD VEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHENLKVFSWEPIRCHDSVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360
           TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV
Sbjct: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360

Query: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420
           SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVS VTVPSAVVPKRNSVKVTSAFN
Sbjct: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSLVTVPSAVVPKRNSVKVTSAFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480
           NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRT+SRHEQDD RKEFDVSGR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTHSRHEQDDCRKEFDVSGR 480

Query: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540
           TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR
Sbjct: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540

Query: 541 GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY 600
           GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY
Sbjct: 541 GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY 600

Query: 601 NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL 660
           NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL
Sbjct: 601 NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL 660

Query: 661 QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES 720
           QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES
Sbjct: 661 QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES 720

Query: 721 DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC 780
           DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC
Sbjct: 721 DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC 780

Query: 781 LPALIRKRGSVAKSAQELNLALQEFQ 807
           LPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 781 LPALIRKRGSVAKSAQELNLALQEFQ 806

[Close]

BLAST of CmoCh04G013480 vs. NCBI nr
Match: KAG6601078.1 (Katanin p80 WD40 repeat-containing subunit B1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1584.3 bits (4101), Expect = 0.0e+00
Identity = 797/806 (98.88%), Postives = 799/806 (99.13%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
Sbjct: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHENLKVFSWEPIRCHD VEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHENLKVFSWEPIRCHDSVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360
           TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKE+KT GRLSV
Sbjct: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKESKTWGRLSV 360

Query: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420
           SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVS VTVPSAVVPKRNSVKV SAFN
Sbjct: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSLVTVPSAVVPKRNSVKVASAFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480
           NPIFNKSDV+PVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR
Sbjct: 421 NPIFNKSDVVPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480

Query: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540
           T PLPRTNSRNEQDDSRKEFD AGR VRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR
Sbjct: 481 TPPLPRTNSRNEQDDSRKEFDVAGRTVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 540

Query: 541 GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY 600
           GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY
Sbjct: 541 GLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTY 600

Query: 601 NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL 660
           NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL
Sbjct: 601 NASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKL 660

Query: 661 QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES 720
           QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES
Sbjct: 661 QAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLES 720

Query: 721 DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC 780
           DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC
Sbjct: 721 DLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKRC 780

Query: 781 LPALIRKRGSVAKSAQELNLALQEFQ 807
           LPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 781 LPALIRKRGSVAKSAQELNLALQEFQ 806

[Close]

BLAST of CmoCh04G013480 vs. NCBI nr
Match: KAG7031884.1 (Katanin p80 WD40 repeat-containing subunit B1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1548.1 bits (4007), Expect = 0.0e+00
Identity = 785/829 (94.69%), Postives = 790/829 (95.30%), Query Frame = 0


Query: 10  QEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFDS 69
           +EFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFDS
Sbjct: 15  EEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFDS 74

Query: 70  SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSSDTNLKIWD 129
           SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSSDTNLKIWD
Sbjct: 75  SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSSDTNLKIWD 134

Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGPIQ 189
           IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGPIQ
Sbjct: 135 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGPIQ 194

Query: 190 CIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGRTLLCGLHEN 249
           CIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGRTLLCGLHEN
Sbjct: 195 CIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGRTLLCGLHEN 254

Query: 250 LKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITRTEPYAINNV 309
           LKVFSWEPIRCHD VEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITRTEPYAINNV
Sbjct: 255 LKVFSWEPIRCHDSVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITRTEPYAINNV 314

Query: 310 NRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSVSQNLDVVKD 369
           N+LNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKE+KTSGRLSVSQNLDVVKD
Sbjct: 315 NKLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKESKTSGRLSVSQNLDVVKD 374

Query: 370 PKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFNNPIFNKSDV 429
           PKSLSSTGNGPSTPQRINSNAGPKTNSVS VTVPSAVVPKRNSVKV SAFNNPIFNKSDV
Sbjct: 375 PKSLSSTGNGPSTPQRINSNAGPKTNSVSLVTVPSAVVPKRNSVKVASAFNNPIFNKSDV 434

Query: 430 IPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGRTTPLPRTNS 489
           +PVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDD+RKEFDVSGRT PLPRTNS
Sbjct: 435 VPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDARKEFDVSGRTPPLPRTNS 494

Query: 490 RNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESRGLKANDMGT 549
           RNEQDDSRKEFD AGR VRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESRGLKANDMGT
Sbjct: 495 RNEQDDSRKEFDVAGRTVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESRGLKANDMGT 554

Query: 550 IADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTYNASAGRAAA 609
           IADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTYNASAGRAAA
Sbjct: 555 IADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLTYNASAGRAAA 614

Query: 610 LENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKLQAVYRYWER 669
           LENLPLNNGRDYHRSPEKETVAPASDEH IENVLQQHDQFVNSMQSRSAKLQAVYRYWER
Sbjct: 615 LENLPLNNGRDYHRSPEKETVAPASDEHAIENVLQQHDQFVNSMQSRSAKLQAVYRYWER 674

Query: 670 HDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLESDLD------ 729
           HDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLESDLD      
Sbjct: 675 HDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLESDLDRSLSLS 734

Query: 730 --------------------------RFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVN 789
                                     RFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVN
Sbjct: 735 LSLSLSLTRARTHKSSITILFHLWNNRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVN 794

Query: 790 IEAEQRLERCNICFIELEKVKRCLPALIRKRGSVAKSAQELNLALQEFQ 807
           IEAEQRLERCNICFIELEKVKRCLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 795 IEAEQRLERCNICFIELEKVKRCLPALIRKRGSVAKSAQELNLALQEFQ 843

[Close]

BLAST of CmoCh04G013480 vs. NCBI nr
Match: XP_022998967.1 (katanin p80 WD40 repeat-containing subunit B1 homolog [Cucurbita maxima])

HSP 1 Score: 1505.0 bits (3895), Expect = 0.0e+00
Identity = 767/807 (95.04%), Postives = 770/807 (95.42%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
Sbjct: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHENLKVFSWEPIRCHD VEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHENLKVFSWEPIRCHDSVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360
           TEPYAINNVNRLNGR EPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV
Sbjct: 301 TEPYAINNVNRLNGRSEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV 360

Query: 361 SQNLDVVKDPKSLSSTGNGPSTPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420
           SQ+ DVVKDPKSLSSTGNGP+TPQRIN NAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN
Sbjct: 361 SQSSDVVKDPKSLSSTGNGPNTPQRINLNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGR 480
           NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVA                         GR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVA-------------------------GR 480

Query: 481 TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRR-FPNGRDEVDNPIISVLSES 540
           TTPLPRTNSRNEQDDSRKEFD AGR VRVPLLSKTTDNRR FPN RDEVDN  ISVLSES
Sbjct: 481 TTPLPRTNSRNEQDDSRKEFDVAGRTVRVPLLSKTTDNRRLFPNVRDEVDNTTISVLSES 540

Query: 541 RGLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEATKGGRIRSHVDWEKRERSNFSRLT 600
           RGLKANDMGTIADNRNSLHDESRGRKLSRDTSFPE TKGGRIRSHVDWEKRERSNFSRLT
Sbjct: 541 RGLKANDMGTIADNRNSLHDESRGRKLSRDTSFPEVTKGGRIRSHVDWEKRERSNFSRLT 600

Query: 601 YNASAGRAAALENLPLNNGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAK 660
           YNASAGRAAALENLPLN GRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAK
Sbjct: 601 YNASAGRAAALENLPLNYGRDYHRSPEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAK 660

Query: 661 LQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLE 720
           LQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLE
Sbjct: 661 LQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNRIEVVTLDICSCILPLLSGLLE 720

Query: 721 SDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNICFIELEKVKR 780
           SDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCN+CFIELEKVKR
Sbjct: 721 SDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKR 780

Query: 781 CLPALIRKRGSVAKSAQELNLALQEFQ 807
           CLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 781 CLPALIRKRGSVAKSAQELNLALQEFQ 782

[Close]

BLAST of CmoCh04G013480 vs. TAIR 10
Match: AT5G23430.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 856.7 bits (2212), Expect = 1.5e-248
Identity = 483/886 (54.51%), Postives = 589/886 (66.48%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHS+ VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRWVVSGGEDN VK+WDLTAGKLL +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEG IQ +DFHPHEFLLATGSAD+ VKFWDLETFELIGS GPET GVRCL+FNPDG+
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           T+LCGL E+LK+FSWEPIRCHDGV+VGWSRLSD+ VHEGKLLGCSYNQSCVGVWVVD++R
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLP--LQNESNAKAGFGGLSVSQTSEPQLKETKT---- 360
           TEP    +  + NG  E +S S     + N++N+K   G LSVSQ  +P LKETK+    
Sbjct: 301 TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL 360

Query: 361 ----------------------------------SGRLSVSQNLDVVKDPKSLSSTGNGP 420
                                              GRLSVSQN DV K+ ++ SSTG+ P
Sbjct: 361 SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP 420

Query: 421 STPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFNNPIFNKSDVIPVIVPRTSSR 480
            TP R++S    K  S  S  V +A   +RN  K      NP+   +D  PVIVPR   R
Sbjct: 421 GTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANPK-ANPVNKAADFAPVIVPRADPR 480

Query: 481 HEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGRTTPLPRTNSRNEQDDSRKEF 540
            E                        +  +SR E D+  RT                   
Sbjct: 481 IE------------------------QATESRAELDIIART------------------- 540

Query: 541 DGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVL--SESRGLKAN---DMGTI----- 600
                   +P   +  D+RR P+ R+  D P  SVL  SES+ ++ N   D GT+     
Sbjct: 541 --------MPYSLQAADSRRSPSSRNNPDLPDASVLEMSESQPVEPNNIPDGGTLPGGKV 600

Query: 601 --------------------ADNRNSL------HDESR---GRKLSRDTSFPEATKGGRI 660
                               +++R+ +      HDE+      + +RD S  E+ KGGR 
Sbjct: 601 GMRGATERSINDFRYKRYGRSNSRSRMGSPPRNHDENYDLVSHRSNRDPSPTESQKGGRF 660

Query: 661 RSHV-DWEKRER-SNFSRLTYNASAGRAAALENLPLNNGRDY-HRSPEKETVAPASDEHT 720
           +S V + E+R R SNF     N S+G   A    P N  +   +  P ++ +   S+E+ 
Sbjct: 661 QSLVINRERRGRFSNFEGPVSNFSSGNMPAPNIRPSNMFKQRGNHMPVEQGIDSPSEENI 720

Query: 721 IENVLQQHDQFVNSMQSRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNR 780
           +E+++ +H+QFV+SMQSR AKLQ V RYWER+D+K ++ ++EKMAD+AV ADV+ I+T R
Sbjct: 721 VEDIMGKHNQFVSSMQSRLAKLQVVRRYWERNDVKNSIGSIEKMADNAVTADVLGIITER 780

Query: 781 IEVVTLDICSCILPLLSGLLESDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNI 805
            E++TLD C+ +LPLL+ LL S +D+ L +S+++L+KLVR +GS IYS+LSA +SVGV+I
Sbjct: 781 NEILTLDNCTSLLPLLTALLGSGMDQHLSVSLDLLLKLVRLYGSPIYSSLSAPASVGVDI 834

[Close]

BLAST of CmoCh04G013480 vs. TAIR 10
Match: AT5G23430.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 851.3 bits (2198), Expect = 6.4e-247
Identity = 483/886 (54.51%), Postives = 588/886 (66.37%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHS+ VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRWVVSGGEDN VK+WDLTAGKLL +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEG IQ +DFHPHEFLLATGSAD+ VKFWDLETFELIGS GPET GVRCL+FNPDG+
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           T+LCGL E+LK+FSWEPIRCHDGV+VGWSRLSD+ VHEGKLLGCSYNQSCVGVWVVD++R
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLP--LQNESNAKAGFGGLSVSQTSEPQLKETKT---- 360
           TEP    +  + NG  E +S S     + N++N+K   G LSVSQ  +P LKETK+    
Sbjct: 301 TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL 360

Query: 361 ----------------------------------SGRLSVSQNLDVVKDPKSLSSTGNGP 420
                                              GRLSVSQN DV K+ ++ SSTG+ P
Sbjct: 361 SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP 420

Query: 421 STPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFNNPIFNKSDVIPVIVPRTSSR 480
            TP R++S    K  S  S  V +A   +RN  K      NP+   +D  PVIVPR   R
Sbjct: 421 GTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANPK-ANPVNKAADFAPVIVPRADPR 480

Query: 481 HEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGRTTPLPRTNSRNEQDDSRKEF 540
            E                        +  +SR E D+  RT                   
Sbjct: 481 IE------------------------QATESRAELDIIART------------------- 540

Query: 541 DGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVL--SESRGLKAN---DMGTI----- 600
                   +P   +  D+RR P+ R+  D P  SVL  SES+ ++ N   D GT+     
Sbjct: 541 --------MPYSLQAADSRRSPSSRNNPDLPDASVLEMSESQPVEPNNIPDGGTLPGGKV 600

Query: 601 --------------------ADNRNSL------HDESR---GRKLSRDTSFPEATKGGRI 660
                               +++R+ +      HDE+      + +RD S  E+ KGGR 
Sbjct: 601 GMRGATERSINDFRYKRYGRSNSRSRMGSPPRNHDENYDLVSHRSNRDPSPTESQKGGRF 660

Query: 661 RSHV-DWEKRER-SNFSRLTYNASAGRAAALENLPLNNGRDY-HRSPEKETVAPASDEHT 720
           +S V + E+R R SNF     N S+G   A    P N  +   +  P ++ +   S+E+ 
Sbjct: 661 QSLVINRERRGRFSNFEGPVSNFSSGNMPAPNIRPSNMFKQRGNHMPVEQGIDSPSEENI 720

Query: 721 IENVLQQHDQFVNSMQSRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNR 780
           +E+++ +H+QFV+SMQSR AKLQ V RYWER+D+K ++ ++EKMAD+AV ADV+ I+T R
Sbjct: 721 VEDIMGKHNQFVSSMQSRLAKLQVVRRYWERNDVKNSIGSIEKMADNAVTADVLGIITER 780

Query: 781 IEVVTLDICSCILPLLSGLLESDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNI 805
            E++TLD C+ +LPLL+ LL S +D+ L +S+++L+KLVR +GS IYS+LSA +SVGV+I
Sbjct: 781 NEILTLDNCTSLLPLLTALLGSGMDQHLSVSLDLLLKLVRLYGSPIYSSLSAPASVGVDI 833

[Close]

BLAST of CmoCh04G013480 vs. TAIR 10
Match: AT5G08390.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 844.0 bits (2179), Expect = 1.0e-244
Identity = 472/886 (53.27%), Postives = 573/886 (64.67%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           M TKRAYKLQEFVAHS+ VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MNTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SE LVAAGAASGTIKLWDLEEAK+VRTLTGHRSNC+SV+FHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGS 120

Query: 121 SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRW+VSGGEDN VK+WDLTAGKLLH+
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180

Query: 181 FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240
           FKSHEG IQ +DFHPHEFLLATGSADK VKFWDLETFELIGS G ETTGVRCLTFNPDG+
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK 240

Query: 241 TLLCGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR 300
           ++LCGL E+LK+FSWEPIRCHDGV+VGWS LSD+ VHEGKLLGCSYNQ+CVGVWVVD++R
Sbjct: 241 SVLCGLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSR 300

Query: 301 TEPYAINNVNRLNGRLEPKSSSNLPLQ--NESNAKAGFGGLSVSQTSEPQLKETKTSGRL 360
           TEP +     + N   E  S S       N++++K   G L  SQ  +P LKETK+ G+L
Sbjct: 301 TEPMS-GGATQSNSHPEKTSGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKL 360

Query: 361 SVSQNLD--------------------VVKDPK------------------SLSSTGNGP 420
           SVSQN D                    +VK+PK                  +LSSTG+  
Sbjct: 361 SVSQNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSSTGSVS 420

Query: 421 STPQRINSNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFNNPIFNKSDVIPVIVPRTSSR 480
            +P R+   + PK+ S  S  VP+A   KRN  K     N P+ NK D  PVIVPRT   
Sbjct: 421 DSPHRVTLTSAPKSASGISTVVPNAAASKRNFGKANPKANPPVVNKEDYFPVIVPRTEPI 480

Query: 481 HEHDDSRKDFDVAGRAVAVPRTNSRHEQDDSRKEFDVSGRTTPLPRTNSRNEQDDSRKEF 540
            E                        +  +SR E D+ GRT P                 
Sbjct: 481 IE------------------------QASESRAELDIIGRTMP----------------- 540

Query: 541 DGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR------------GLKANDMG 600
                     L SK  D+RR  + R+E D P  S+L  S+                +D G
Sbjct: 541 --------YSLQSKAADSRRLSSSRNEPDLPTSSLLERSQSQPIEPITLQDGNTYPSDEG 600

Query: 601 TIADNRNSLHDESRGR---------------------------KLSRDTSFPEATKGGRI 660
              D     + ES+ R                             +RD+S  E+ KGGR+
Sbjct: 601 GSWDTAERTNKESKCRVFGRFNSRSLVRSPPRNHDENSDLISYNANRDSSPTESRKGGRL 660

Query: 661 RSHV-DWEKRER-SNFSRLTYNASAGRAAALENLPLNNGRDY-HRSPEKETVAPASDEHT 720
            S V + E+R R SNF     ++S G   A  + P N  +   +  P  + +  AS+E  
Sbjct: 661 HSLVLNRERRGRFSNFEGPVSSSSGGNMTAPNSRPSNMLKQRGNHVPVDQGITSASEEDI 720

Query: 721 IENVLQQHDQFVNSMQSRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTNR 780
           + +++ QHDQFV+SM SR AKLQ V RYWER+DIK ++S++EKMAD+AV ADV+ I+  R
Sbjct: 721 VADIMGQHDQFVSSMHSRLAKLQVVRRYWERNDIKNSISSIEKMADNAVIADVLLIVNER 780

Query: 781 IEVVTLDICSCILPLLSGLLESDLDRFLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNI 805
            E++TLD C+ +LPLL+ LL S++D  L + +++L+KLVR +GS IYS+LSA SSVGV+I
Sbjct: 781 PEILTLDTCTSLLPLLTALLGSNMDSHLSVCLDLLLKLVRMYGSQIYSSLSAPSSVGVDI 836

[Close]

BLAST of CmoCh04G013480 vs. TAIR 10
Match: AT1G11160.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 575.5 bits (1482), Expect = 6.8e-164
Identity = 382/1027 (37.20%), Postives = 532/1027 (51.80%), Query Frame = 0


Query: 4    KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
            KR YKLQEFVAHS  VNCL IG+K+SR+L+TGG+D+KVNLW+IGK  + +SL GHTS +D
Sbjct: 3    KRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVD 62

Query: 64   SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSSDT 123
            SV+F+S EVLV AGA+SG IKLWDLEE+K+VR  TGHRSNC +V+FHPFGEF ASGSSDT
Sbjct: 63   SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122

Query: 124  NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKS 183
            NL++WD RKKGCI TYKGHTRG++ I F+PDGRWVVSGG DN VK+WDLTAGKLLH+FK 
Sbjct: 123  NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 182

Query: 184  HEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGRTLL 243
            HEGPI+ +DFHP EFLLATGSAD+ VKFWDLETFELIG+  PE TGVR + F+PDG+TL 
Sbjct: 183  HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242

Query: 244  CGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITRTEP 303
            CGL + LKV+SWEP+ C DGV++GWS L D  ++EGK +GCSY ++ VG+WV DI+  EP
Sbjct: 243  CGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSDISELEP 302

Query: 304  YAINNVNRLNGRLEPKSSSNLPLQNESNAKAGFGGLSVS-QTSE-PQLKETKTSGRLSVS 363
            Y    V+        K  S L  Q+E       G +S   +T E   +    T G L+V+
Sbjct: 303  YGA--VSEDKNECMVKRFSVLNDQSERMGSGPRGSVSPDYETREIKNIYVDSTGGNLNVA 362

Query: 364  QNLDVVKDPKSLSS------------------TGNGPSTPQRINSNAGPKTNSVSSVTVP 423
            QN   +K    L S                   G+  S+  R +S++G +++     ++P
Sbjct: 363  QNPGSLKATLPLESGKVATMVSEKQNAAYFGPAGDKYSSTSR-DSDSGEESSYSERESIP 422

Query: 424  --------------------------------------------------SAVVPKRNSV 483
                                                              +A + ++N+ 
Sbjct: 423  FSRTKSGMLLRPAHVRKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNAFLSEQNAS 482

Query: 484  K-----------VTSAF-----NNPIFNKSDVIPVIVPR--TSSRHEHDDSRKDF----- 543
            K           +T+ F     + P  ++++ + +  PR   SS  +++D+R+       
Sbjct: 483  KPFDAEDSIIKGITNKFEKALSSEPPTDEANRMFLKPPRIHRSSNSKYNDTRRAMSADPA 542

Query: 544  -----------DVAGRAVAVPRTNSRHEQDDSRKEFD-------------------VSGR 603
                       DV        R  SR +  D +K  +                   VSGR
Sbjct: 543  TFGKGGMENSGDVEDIPSKTERVLSREKPGDEQKNTEYPSGSRELNPVKIVEGVNVVSGR 602

Query: 604  TTPLPRTNSRNEQDDSRKEFDGAGRAVRVPLLSKTTDNRRFPNGRDEVDNPIISVLSESR 663
            T  L     R E+       +GA   +     +   D R+    R   + P+IS    +R
Sbjct: 603  TRSLVEKFERGEK---TTHTEGASTTIEQNNNAVQEDPRK--TSRQTGETPVIST-RRAR 662

Query: 664  GLKANDMGTIAD-NRNSLHDESRGRKLSRDTSFP-------EATKGGRIRSHVDWEKRER 723
               A  M  + + + N   DE    + +R +SFP       +A+        V   +  R
Sbjct: 663  STPARVMPIVLNRDSNVTSDEPPLTQPARTSSFPVMPVILNQASNVTYDEPSVALTQESR 722

Query: 724  SNFSRL---TYNA-------------------SAGRA-------AALENLPLNNGRDYHR 783
            ++ +R+   T+N                    SA R        A     P+ + R    
Sbjct: 723  TSHARILPVTFNQATNITSEEASVTLRRQRRNSAARVRPVLLSQATSHECPVTSVRPLRT 782

Query: 784  SP---------------------------------------------------------- 805
            SP                                                          
Sbjct: 783  SPARVMPTKLNQSVNMTSDTSHIASMHRVSPTQMLATPTVIDQVADMTLDETHATQIQPA 842

[Close]

BLAST of CmoCh04G013480 vs. TAIR 10
Match: AT1G61210.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 543.5 bits (1399), Expect = 2.9e-154
Identity = 402/1181 (34.04%), Postives = 555/1181 (46.99%), Query Frame = 0


Query: 4    KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
            KR YKLQEF+AHS+ VNCL IG+K+SR+ +TGG+D+KVNLWAIGKP +++SL GHTS +D
Sbjct: 3    KRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVD 62

Query: 64   SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSSDT 123
            SV+FDS+EVLV AGA+SG IKLWD+EEAK+VR  TGHRSNC +V+FHPFGEF ASGSSD 
Sbjct: 63   SVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDA 122

Query: 124  NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKS 183
            NLKIWDIRKKGCI TYKGH+RG++ IRFTPDGRWVVSGG DN VK+WDLTAGKLLH+FK 
Sbjct: 123  NLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKF 182

Query: 184  HEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGRTLL 243
            HEGPI+ +DFHP EFLLATGSAD+ VKFWDLETFELIGS  PE TGVR + F+PDGRTL 
Sbjct: 183  HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLF 242

Query: 244  CGLHENLKVFSWEPIRCHDGVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITRTEP 303
            CGL ++LKV+SWEP+ CHDGV++GWS L DL + EGKLLGCSY Q+ VG+WV DI++ EP
Sbjct: 243  CGLDDSLKVYSWEPVVCHDGVDMGWSTLGDLCISEGKLLGCSYYQNSVGIWVSDISQIEP 302

Query: 304  YAINNVNR--------------------------LNGRLEPKSSSNLPLQNESNAKA-GF 363
            Y I + ++                           +   E K   N+ +   ++A A   
Sbjct: 303  YGIGSADKKECVEKILSALDDQSFDRIKSTPRRSSSPDYETKEIKNIYIDCGNSAVAHKS 362

Query: 364  GGLSVSQTSEPQL-------------------KETKTSGRLSVS---------------- 423
            G LS   TS  Q                    K++  SG+ S++                
Sbjct: 363  GSLSTPATSTGQAGDNKSLVVHSVVPRDSDIGKDSSDSGKESITFSKTKPGMLLRPAYVR 422

Query: 424  ---------------------------QNLD----------------------------- 483
                                       + LD                             
Sbjct: 423  KTPTKFDETKKQSVAVGYLKKSGLDGEKKLDTETAFDSEMSGRNPYDADDSIIKSITNKF 482

Query: 484  ----------------VVKDP--------------------------------------- 543
                            ++K P                                       
Sbjct: 483  EQALLPESPTDEAKCMLLKPPRVQRSPSTKYNEARWATSTDSGALDSKKNGLESSRDMDL 542

Query: 544  -------------------KSLSSTGNGPSTPQR-------INSNAG------------- 603
                               KS+SS      +P++       + S  G             
Sbjct: 543  PTGLRDDRGSNPCEEDIENKSISSRSERVLSPEKAGDELKSLESPGGSKESKSVKVVRGV 602

Query: 604  ------------------------------------------PKTNSVSSVT-VPSAVVP 663
                                                      P T SV +V+ +P+ V+P
Sbjct: 603  KVVSGRTRSLVERFERGEKITHSEDKAASATVVHSSNSVEEEPLTASVQTVSMMPTQVMP 662

Query: 664  KR-----NSVKVTSAFNNPIFNKSD---VIPVIV-----------PRTSSRHEHDDSRK- 723
             +     NS  V     +    KS    V+PV++           P TS+R +   +   
Sbjct: 663  VKLDQATNSTTVDVPVLSTRRTKSTPVRVMPVVLGRDTSMATDTPPVTSTRPDRTSATNL 722

Query: 724  DFDVAG-------RAVAVP--------RTNSRHEQDDSRKEF-----------DVSG--- 783
              DV+G       R    P         T  + ++      +           DVSG   
Sbjct: 723  TSDVSGVTSKRQTRTSPAPVMPMILNQTTKMKSDEPSITSTWPDRTSATDLTSDVSGVIS 782

Query: 784  ----RTTPLP--------RTNSRNEQ------------------DDSRKEFDGAGRAVRV 804
                RT+P P        +T  ++++                  D+S        +    
Sbjct: 783  SRQTRTSPAPVMPMKLNQKTKIKSDEPPITSTRPDRPSATNLTSDESPVTSTRQAKTSPA 842

The following BLAST results are available for this feature:

BLAST of CmoCh04G013480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0T9	2.1e-247	54.51	Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 OS=Arabidopsis tha...	[more]
F4KB17	1.4e-243	53.27	Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3 OS=Arabidopsis tha...	[more]
A0A1P8AW69	9.6e-163	37.28	Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 OS=Arabidopsis tha...	[more]
F4HTH8	6.9e-153	33.81	Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2 OS=Arabidopsis tha...	[more]
O61585	9.1e-113	59.67	Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus purpuratus O...	[more]

BLAST of CmoCh04G013480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY50	0.0e+00	100.00	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucurbita moschata OX=3...	[more]
A0A6J1K9I2	0.0e+00	95.04	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucurbita maxima OX=366...	[more]
A0A1S3BDT9	0.0e+00	86.76	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KPN4	0.0e+00	86.76	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis sativus OX=3659...	[more]
A0A1S3BDT8	0.0e+00	84.27	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CmoCh04G013480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957041.1	0.0e+00	100.00	katanin p80 WD40 repeat-containing subunit B1 homolog [Cucurbita moschata]	[more]
XP_023538621.1	0.0e+00	99.38	katanin p80 WD40 repeat-containing subunit B1 homolog [Cucurbita pepo subsp. pep...	[more]
KAG6601078.1	0.0e+00	98.88	Katanin p80 WD40 repeat-containing subunit B1-like protein, partial [Cucurbita a...	[more]
KAG7031884.1	0.0e+00	94.69	Katanin p80 WD40 repeat-containing subunit B1-like protein, partial [Cucurbita a...	[more]
XP_022998967.1	0.0e+00	95.04	katanin p80 WD40 repeat-containing subunit B1 homolog [Cucurbita maxima]	[more]

BLAST of CmoCh04G013480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23430.1	1.5e-248	54.51	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G23430.2	6.4e-247	54.51	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G08390.1	1.0e-244	53.27	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G11160.1	6.8e-164	37.20	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G61210.2	2.9e-154	34.04	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 158..172 score: 43.2 coord: 116..130 score: 38.34 coord: 200..214 score: 37.95
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 48..87 e-value: 2.1E-5 score: 33.9 coord: 90..129 e-value: 9.2E-10 score: 48.4 coord: 174..213 e-value: 7.8E-10 score: 48.7 coord: 5..45 e-value: 0.004 score: 26.4 coord: 216..254 e-value: 2.7 score: 14.3 coord: 132..171 e-value: 3.7E-13 score: 59.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 175..213 e-value: 7.6E-7 score: 29.7 coord: 9..44 e-value: 0.052 score: 14.5 coord: 135..171 e-value: 1.2E-11 score: 45.0 coord: 93..129 e-value: 7.0E-8 score: 33.0 coord: 52..87 e-value: 1.0E-4 score: 23.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 139..180 score: 18.562237
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 12..54 score: 10.040596
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 181..222 score: 15.621435
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 97..138 score: 15.420926
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 55..96 score: 15.35409
IPR028021	Katanin p80 subunit, C-terminal	PFAM	PF13925	Katanin_con80	coord: 644..802 e-value: 2.5E-50 score: 170.7
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 10..294 e-value: 1.5E-73 score: 249.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..528
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..454
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 462..479
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 490..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 546..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 553..571
None	No IPR available	PANTHER	PTHR19845:SF0	KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1	coord: 4..804
None	No IPR available	PANTHER	PTHR19845	KATANIN P80 SUBUNIT	coord: 4..804
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 139..176 score: 14.371031
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 55..89 score: 11.444681
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 181..216 score: 12.420132
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 97..131 score: 12.130133
None	No IPR available	CDD	cd00200	WD40	coord: 9..261 e-value: 1.12738E-66 score: 221.44
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 200..214
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 158..172
IPR026962	Katanin p80 WD40 repeat-containing subunit B1	HAMAP	MF_03022	Katanin_p80_B1	coord: 1..805 score: 20.517462
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 7..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G013480.1	CmoCh04G013480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007019	microtubule depolymerization
biological_process	GO:0051013	microtubule severing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0008352	katanin complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0005515	protein binding