
CmoCh04G012130 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTGATTCCAAGCATTTTTGGTGGGCGCCGGAGCAACGTCTTCGATCCCTTCTCCTTAGACGTTTGGGATCCTTTCGAAGGCTTACCATTTTCAAGCTCTCTGGCCAACGTCCCCTCCTCCTCTGCTTTTGCCAACACCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACGTGTTGAAGGCGGATCTTCCGGGGATCAAAAAGGAGGAAGTGAAGGTTGAAATTGAAGAAGGGGGAGTTCTGCANNNTGAAGAAGGGGGAGTTCTGCAGATCAGCGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCATAGAATTGAAAGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCGAAAGTAGAAGAGGTGAAGGCCAACATGGAGAATGGGGTGCTGACGGTGACGGTGCCCAAAATGGAAGTGAAGAAGCCAGAAGTCAGGAGCATTGACATCTCTGGTTAAACACGGTTGGTTCTTCTGCTCCTTCCTGATCGGGCAGAAGTAAGTTGTTGAAATGGGTGGGTTTCTGATTTTGATGTTTTCCACAATGTTTTTGAATGTGAAAAAGATGAAGAAAATGGTTTGTAATTTCCGGTCTATTTGTGGGCTATTTCGGTTTTGTTTATGATGTATGAAAAAGAATGTGTAAGAGAAAATATATGAAAAAGAATGTGTAAAAGAAAATACATGGTAATTAAATAATTCTGTTTGGTACTAGACAAAAATCTTGGATCCGAGTTTCATAGTATCTTTGATAACTTGATGTGATTTTTCATTCACCTAGGATTTGAGTTTAGTGGGATTAATTCTTGGATCCGAGTGATTTTTCATTCACCTAGGATTTGAGTTTAGTGGGATTAATTCTTGGATCCGAGTGATTTTTCATTCACCTAGGATTTGAGTTTAGTGGGATTAATTCTTGGATCCGAGTTTCATAGTATCTAATCACATCAAGTTATCAGAGTTTAGTGGGATTAATTATATTGTTTTTTAGGATTTGTGTAATTATATTAAGTGCATTAAATTTCATATTCCAAAATAAAATAATTCTAAAAAGATGGTTGGAGTGAAGCAAATTTTACAATTAAAAAAACTTAATACCTCCTTTATGAGGTCCTATCGGGATAGGTAGGCCCAAAAGATGCTCCAAATCAAGAACTTGGTTCATAGGGCTTACTCTTGAATTTCAAACTGTGCTCCAAATCAAGAACTTGGTTCATAGGGCTTACTCTTGAATTCTTCAACCATATGATCACTAAAAAAATTTATCTGATCACTTCAGGCTTTAATGGAATATTAGCATCTGAACTCTCTTAGAATCACTGTTGTTATGTCGTGAATCCGACTCAAGCCGAATCTGGTTAAATGTCTAAACCACTTAACAATGCAGATCACACACACCCAAACAAACCTTTTTCATGTTTGATTACAAAGTGAATGCACATTGCAGAACACAATTCTTTGCTTTCTTATGTATACCATTACAGTTCATTTGGCACATTACGAAAGCCTGTACAGCATTTGGCACATTACGAAAGCCTGTACAGCATCCTATTTAAAGTCTTGGATGTGTACGATCACTTAACAAGAAATAAACTATTTTATTAGAGATGAAGAGAATTGGATATTCATATCTTATACATCAACGACTCAATGTGAAATTCTGTGTTTAGTACACGACCAGACCAACCAGACTCCTTTTCCAGACTCCTTTTCGACTTTCCAATGTAACACATTACTAAATTACATGTTTTATTTAACCAAAACACAACATCAGCCAGAGATGTCAATGGTCTTGATTTCCGGCTTCTTCACTTCCATCTTAGGCACTGTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCAGCCTGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCATTTGTCGTTTTTCTCCTCCTGTTCTTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTCTTGATCCCGGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGTCTCACTAGCAGAGGAGGGGACGTTGGCCAGTGAGCTTGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATTGCTGTACTTGAGAATGATAGAATTGGAACTTTGTTTGCTGTGTTTGTCGATGCCCATCCACCGCTGGGACCAAGGCATTTAAATAGGAAGCAACAGAGCATGCGAGTGGTGTCGTGGCTTTTCTAG ATGGCGTTGATTCCAAGCATTTTTGGTGGGCGCCGGAGCAACGTCTTCGATCCCTTCTCCTTAGACGTTTGGGATCCTTTCGAAGGCTTACCATTTTCAAGCTCTCTGGCCAACGTCCCCTCCTCCTCTGCTTTTGCCAACACCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACGTGTTGAAGGCGGATCTTCCGGGGATCAAAAAGGAGGAAGTGAAGGTTGAAATTGAAGAAGGGGGAGTTCTGCANNNTGAAGAAGGGGGAGTTCTGCAGATCAGCGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCATAGAATTGAAAGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCGAAAGTAGAAGAGGTGAAGGCCAACATGGAGAATGGGGTGCTGACGGTGACGGTGCCCAAAATGGAAGTGAAGAAGCCAGAAGTCAGGAGCATTGACATCTCTGTACACGACCAGACCAACCAGACTCCTTTTCCAGACTCCTTTTCGACTTTCCAATGTAACACATTACTAAATTACATGTTTTATTTAACCAAAACACAACATCAGCCAGAGATGTCAATGGTCTTGATTTCCGGCTTCTTCACTTCCATCTTAGGCACTGTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCAGCCTGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCATTTGTCGTTTTTCTCCTCCTGTTCTTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTCTTGATCCCGGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGTCTCACTAGCAGAGGAGGGGACGTTGGCCAGTGAGCTTGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATTGCTGTACTTGAGAATGATAGAATTGGAACTTTGTTTGCTGTGTTTGTCGATGCCCATCCACCGCTGGGACCAAGGCATTTAAATAGGAAGCAACAGAGCATGCGAGTGGTGTCGTGGCTTTTCTAG ATGGCGTTGATTCCAAGCATTTTTGGTGGGCGCCGGAGCAACGTCTTCGATCCCTTCTCCTTAGACGTTTGGGATCCTTTCGAAGGCTTACCATTTTCAAGCTCTCTGGCCAACGTCCCCTCCTCCTCTGCTTTTGCCAACACCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACGTGTTGAAGGCGGATCTTCCGGGGATCAAAAAGGAGGAAGTGAAGGTTGAAATTGAAGAAGGGGGAGTTCTGCANNNTGAAGAAGGGGGAGTTCTGCAGATCAGCGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCATAGAATTGAAAGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCGAAAGTAGAAGAGGTGAAGGCCAACATGGAGAATGGGGTGCTGACGGTGACGGTGCCCAAAATGGAAGTGAAGAAGCCAGAAGTCAGGAGCATTGACATCTCTGTACACGACCAGACCAACCAGACTCCTTTTCCAGACTCCTTTTCGACTTTCCAATGTAACACATTACTAAATTACATGTTTTATTTAACCAAAACACAACATCAGCCAGAGATGTCAATGGTCTTGATTTCCGGCTTCTTCACTTCCATCTTAGGCACTGTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCAGCCTGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCATTTGTCGTTTTTCTCCTCCTGTTCTTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTCTTGATCCCGGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGTCTCACTAGCAGAGGAGGGGACGTTGGCCAGTGAGCTTGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATTGCTGTACTTGAGAATGATAGAATTGGAACTTTGTTTGCTGTGTTTGTCGATGCCCATCCACCGCTGGGACCAAGGCATTTAAATAGGAAGCAACAGAGCATGCGAGTGGTGTCGTGGCTTTTCTAG MALIPSIFGGRRSNVFDPFSLDVWDPFEGLPFSSSLANVPSSSAFANTRIDWKETPEAHVLKADLPGIKKEEVKVEIEEGGVLXXEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRLPENAKVEEVKANMENGVLTVTVPKMEVKKPEVRSIDISVHDQTNQTPFPDSFSTFQCNTLLNYMFYLTKTQHQPEMSMVLISGFFTSILGTVTVSTPFSMLAFTSPAFAFSGSLNLLRNFPLLRSILCHLSFFSSCSLLLSPLICSTPPSSTSTFTSSFLIPGRSALKMWASGVSFQSMRVLAKAEVSLAEEGTLASELENGKPSKGSQTSKEKGSKTLLRRPPKMLGINAIVVVGELDSRIAVLENDRIGTLFAVFVDAHPPLGPRHLNRKQQSMRVVSWLF Homology
BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 9.1e-61 Identity = 119/164 (72.56%), Postives = 139/164 (84.76%), Query Frame = 0
BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 234.6 bits (597), Expect = 2.0e-60 Identity = 118/164 (71.95%), Postives = 138/164 (84.15%), Query Frame = 0
BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.0e-60 Identity = 122/165 (73.94%), Postives = 141/165 (85.45%), Query Frame = 0
BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 7.7e-60 Identity = 122/166 (73.49%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of CmoCh04G012130 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 3.8e-59 Identity = 115/162 (70.99%), Postives = 139/162 (85.80%), Query Frame = 0
BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1GY40 (uncharacterized protein LOC111458525 OS=Cucurbita moschata OX=3662 GN=LOC111458525 PE=3 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 9.7e-82 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1ILW3 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478197 PE=3 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.2e-71 Identity = 146/166 (87.95%), Postives = 151/166 (90.96%), Query Frame = 0
BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1GZE6 (17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111458528 PE=3 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.2e-71 Identity = 147/166 (88.55%), Postives = 151/166 (90.96%), Query Frame = 0
BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1IKB6 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478205 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 3.5e-71 Identity = 145/166 (87.35%), Postives = 151/166 (90.96%), Query Frame = 0
BLAST of CmoCh04G012130 vs. ExPASy TrEMBL
Match: A0A6J1H0S8 (17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111458527 PE=3 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 1.7e-70 Identity = 143/166 (86.14%), Postives = 150/166 (90.36%), Query Frame = 0
BLAST of CmoCh04G012130 vs. NCBI nr
Match: KAG6600961.1 (18.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362.5 bits (929), Expect = 4.9e-96 Identity = 220/360 (61.11%), Postives = 228/360 (63.33%), Query Frame = 0
BLAST of CmoCh04G012130 vs. NCBI nr
Match: XP_022957031.1 (uncharacterized protein LOC111458525 [Cucurbita moschata]) HSP 1 Score: 313.9 bits (803), Expect = 2.0e-81 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CmoCh04G012130 vs. NCBI nr
Match: XP_023529977.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 286.2 bits (731), Expect = 4.5e-73 Identity = 151/166 (90.96%), Postives = 152/166 (91.57%), Query Frame = 0
BLAST of CmoCh04G012130 vs. NCBI nr
Match: KAG6600959.1 (18.2 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 283.9 bits (725), Expect = 2.2e-72 Identity = 148/165 (89.70%), Postives = 152/165 (92.12%), Query Frame = 0
BLAST of CmoCh04G012130 vs. NCBI nr
Match: KAG6600957.1 (18.2 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 283.5 bits (724), Expect = 2.9e-72 Identity = 150/166 (90.36%), Postives = 151/166 (90.96%), Query Frame = 0
BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 234.6 bits (597), Expect = 1.4e-61 Identity = 118/164 (71.95%), Postives = 138/164 (84.15%), Query Frame = 0
BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 ) HSP 1 Score: 232.6 bits (592), Expect = 5.5e-61 Identity = 122/166 (73.49%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 ) HSP 1 Score: 229.9 bits (585), Expect = 3.5e-60 Identity = 114/164 (69.51%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 203.4 bits (516), Expect = 3.5e-52 Identity = 109/163 (66.87%), Postives = 128/163 (78.53%), Query Frame = 0
BLAST of CmoCh04G012130 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 200.7 bits (509), Expect = 2.3e-51 Identity = 110/167 (65.87%), Postives = 128/167 (76.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|