CmoCh04G011100 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G011100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	binding partner of ACD11 1-like
Location	Cmo_Chr04: 5655708 .. 5660406 (+)
RNA-Seq Expression	CmoCh04G011100
Synteny	CmoCh04G011100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACGGACTGTCTTGATACGCTTTTGAATACAAAATTCTTCACTCCTTGCAATCTTCATCCTAGTCTCCAGACATATAAATTCTGCATTGATTGTAGTGTTAGCTTCTGCACGAATTGTACAGTCCGTAATCTTCATGGGCAGGTTCGTATCTGGAGATATTCCTATCATGATGTTGTGCGCGTTCAGGTAATGAAGAATCACTTTTGCTGTGCAGAGATTCAGGTATAATACATTCTTTCCCTTGTGCCTCCCGTGTCTGGGCCTTGCGACGTGTGCGAGTGCCGAGCAACTTTCCGACTATAATTGTCTTTGATAGAAAAGATGCCTGAATTCCATCTGTTTGTTGCTGATCTTTTTGCTTATGTTGTTGAAATCATCGACTTTAGAGATAGGTTTTCCTTTTTTCATTCAAACAGATAGTTTTTAAATTTGTTAGCCAAATTATCTGGTTTTTAAGCACTAGTAATTCTTGAATCGAAAATGATATGTTCTTGAGGAAATCTCACCAGCCTGATTTTGATCCTTGCCAGTTTGAATGGATGAATATACAATTTGATACTTTGATTCCTGTCCGATACCAGTTTTAGTAATAGGAATAAAGTTTGTTTGCTATCGAGTTGTTTTTTGGTTTGTTTTGTAAAAGTTTGCCTTTGTTCTATGAATCCATCTCTATGCCCCCTAACTTGAAGCCCCCAATTGCTTGATTCTGCAGTCATATCGAGTCAATGGTGAAATAGCTGTTCATCTAAACTCCCGTGGTCAACCCGTCGACACCAAATCACCAAAGCGGAAGTTTGGTGATTTTTGTGAAGATTGTGGCAGAAGTGTAAATGATCCTCATCCCTTCTGTTCCATCGCTTGCAAGGTTAGAAACATATGAACCTTATCCACATCAGTTGGACCTTACAAGAGCATATAAAATTCTTCCTAGCAGGCGGGTTTTAAAAACTGTGAGACCGACGCCTGTACATAACGAGTCAAATCTGACAATATCTGCTAATAGTAAGCTTAGACTGTTACAAATAATATCAAAATCAGTCCCCGAGTAGTGTGCCGCTGGGCTCACAAGCGGGTGGATTGTAAGATCCCTCGTCGATTGAAGAAAGGAATGAAACATTCTTTATAAGAGTGTAGAAACCTCTCTCTAAGAGACGCGTTTTAAAAATCGTGAGGTTGACGGCGCGGCCCGACAATATTCTAAACAATTTTATTACTGCATCACACACAGATTGTTAACAATTCAAATGCTGTAAAAACATCAGGTTTCTGTGAACTCAAAGTTCAAGGAACAGATCATTGGAACCATCATATATCCGAGCCCGGAATCCATTTACTTATCATTCAAGGAAAAAAGCAGCCCAGAAACAGAAGCATGGGAATTGGAATCAACCATATCAGTTGCAGAGTCCACAGAAGAGACCCAAGCTACCTCTTCATCTTCAAGGCCAAGAAAACGCAGAAGGAAAGGCATCCCTCGCAGGTGTCCATTTTTTTGACAAGAAGATAAGATGCAACATTTTCATCTCCTTTTTAACTTCCTTGTGGCTCTCAAATGGTATGCTTCTTAATTTTTATTTACCTTGACTCGTATATTTCATAGAATGTCTAGTAGCGAAATGAAATCATCAATATAAAAGCCAGAATTGTAGATCTCTTTGCTGCTGCATGGTTTTTTAAATTTCTTTTTCAAGTTTTGACAAGATTAGTTGGTTGACAAAGCTGATATTAACATATATTCTTTTACACTAATTCTTTGCCTCGTCCATGGCGAGTCTTGGCCGCTACCGACGATGGCGACGTGGGAAGGATGGAGGTGTTTATGCACGCAGCGATGATGGGAGGAGGTAATGGAGGTGTTTATGCACGCAGCGATGATGGGAGGAGGTAACCTCTAAATTAAAATTAAGTATTTTAATCAATTTAACAATGTTCAAATTAATTGGTAGTGCTATGTTAAACCAATTTAAATAAAAACAACAAAAATAGAGAAATATTTTTATTTTATATATTAAATAATTATCACCTTTACTTCGGTTGAAATTTGGATAATTTTCTATTTTATCAATGAGTGGCTCAGTGATTTGGTACAGTCAAATTTGGTCCCGCCTCCGCTAGAGCCCAAAAAAAAAGGCTCTTCCCTACAAGAATTTCGTCTCTTCTCTTCTTCTCTTCTTCTCCTCTTCTCCCCGCCGCTTGATCTCATCAACCTATCATCTTCCGCTATCTCTAATTCCCTTCTCAACCATTCTTTTACCTTTCAGAAATGTCGGTGAGTTCTTCTTCATCATCATCTTGTTCTTCTGTTATCTGTGAATCTTTGATGCAGATCTGCCGCATTTATGTTTAGTAATTGTTTTTTTGTTTCTGATGGGTAATGGCGATTTGGGGAATTGTAGTTGTAATGTGGAACTAGGGTTTTGTTTTTCTTTCTAATTTTGATTTTGATTTTGATTTTCAAGGTCTCTGGCTTCTACAATGACCTCTGATTCTGATTGGTTGCCGACAGAATTCCACTGATTTTTCTCCCCCAAATTTTGAATTTATCAACAAAACAGTCTCTTCGTCCCTTCCTTCCTCTCAAATCAGCTGCTTCAATCCCAACTTTTGTTTTCAGTTTCTTCTCAAAAAGGTTGAGTGAAGTGAAAATTAGCATGGTGAATTCACTGCTAAATCCTTTTTGTTTTTGGTTCTTAATTTTCTATTTCTGAAACCAGCTACCTGAATCTCACCCTAGTTCTTTCTTTTCACTTTGATGATGAACTCAACGGAGTCAACACTAAGTACTGTTCACTACTAAATCCAAAAACTTGATAAGTATGATGAAGCTCAACAATTATTAGAATGTTAATTCTCTAACTAGTGCTGCCTTTTAAAAAAATTTAAATACTAGTTTTTCGTACAAAAATTGTAGGGGTGTGGAGGGTAGAAGTATCAACTTTTGAGAAGATAAATGATAGTCTTATCTACTAAGTTTGTAATAGTTCGCCTACAGCTAGCCGACATTGTTCTTTTTGTGTTTTCCCTTTCGAGCTTTTCCTCGAGATTTTTAAAATACCTCTACTAGGAGAGGTTTCCATGCCCTTATAAAAAATGCTTCGTTCCCCTCTGTAATCGACATGAGATCCCACAATCCATCCCTCTAGGGCCCAGCGTTCTCGTTGGCATTGTGAGATTTGATATATACACATATATATATGTGTATTCTGTCATTCATAAGTTTAGGTATTAATTTGAAGAAGGAATGATATTATAAATGTACATTCGAACACTTGCATTTCTTAATTATTTTTAATGGGTTTTTTTCTTTTTTTCTTTTAAAAAAAATCTTATGTAGATGAGAACTGTCAAGGTCAGCAATATCTCAAAAGCTACTTCTGAGAGAGATATCAAAGAATTCCTTTCATTCTCTGGTCAAATCCTTTATGTTGAAATGCAAAGGTTAGTGATTATATTCTATCTGTTTGTTTTGTTTGGAGAATTATTATTATTATTATTATTGTTTTTATTTTGTGTAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATGAGGATTCTCAAGGAGCAGATACTGCAATACTTTTAACTGTATGTTCCTTTTTAGGCACATTGGTCTCTTTATTTCTATAATTTATGTTAGTTTTTGTGAACCTTTCTCTCTTAATCTCTTCTCTTAGGGTGCAAAAATTGGTGATCTATTTGTATCAATTACTCTGGTTGAGAATTACCATCTTCCACCTGAAGCAATGTCATCAATCCTGGTAATAAACGTCTCGTGTATATGCATTCGTTGTCGACCCTTGAATTCCTGCACATAAACGAGTTACATTATTCGATTTGAAATCTTGATTATCAAGTAGCCGTCTTTGTCTTCAAGGAGGTATTGCAAACTATTTACTTAAAATCTTAATGACCTTTTGAAGGATAAAAGGAAAACTGCTACCAGGATTGCTCCGAGTCAGGCTGAAGACGTTGTAAGTACAATGCTCGCAAAAGGCTTCATCTTGGGGAAGGATGCTCTCAACAAGGCAAAAGCGTTCGACGAACGACTCCAATTGACATCAAACGCTTCTGCAACTGTCGCTTCCATTGACAGGAAGATGGGTATAACTGAGAAAATAACTGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTACGGAGAAGACGAAATCCGCTCTAGCAGTTGCCGAGCAGAAGGCAAGCAACGCTGGGACTGCGCTCATGAGCAACTATTACGTGTTAACTGGAGCAGCTTGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCCGAGGAAGTGACCCAGATGACAAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAGAGGAGAGTATATACCACGAAAGAACCGGGATCATCAATAACTTCGCCGAGTTCCATCTCGACGAGCCTTTACCGGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAGACAGTAAGTTGTGAATCATACGCATGAAAACCTACACTTGTGAAATACATTGCTTTCCCCAATCAACTGTATGATATATACATTTTCATCTAGAGGTGCTCCAATTACAGGGTTTACTTCTTTATACACCTGCTCCTGTTGAAATGTCATGACGTTCTTTTGAGTGAAAAATTCACTTTTTGAATACTTGATTATACAAT

mRNA sequence

ATGGAAACGGACTGTCTTGATACGCTTTTGAATACAAAATTCTTCACTCCTTGCAATCTTCATCCTAGTCTCCAGACATATAAATTCTGCATTGATTGTAGTGTTAGCTTCTGCACGAATTGTACAGTCCGTAATCTTCATGGGCAGGTTCGTATCTGGAGATATTCCTATCATGATGTTGTGCGCGTTCAGTCATATCGAGTCAATGGTGAAATAGCTGTTCATCTAAACTCCCGTGGTCAACCCGTCGACACCAAATCACCAAAGCGGAAGTTTGGTGATTTTTGTGAAGATTGTGGCAGAAGTGTTTCTGTGAACTCAAAGTTCAAGGAACAGATCATTGGAACCATCATATATCCGAGCCCGGAATCCATTTACTTATCATTCAAGGAAAAAAGCAGCCCAGAAACAGAAGCATGGGAATTGGAATCAACCATATCAGTTGCAGAGTCCACAGAAGAGACCCAAGCTACCTCTTCATCTTCAAGGCCAAGAAAACGCAGAAGGAAAGGCATCCCTCGCAGTCTTGGCCGCTACCGACGATGGCGACGTGGGAAGGATGGAGGTGTTTATGCACGCAGCGATGATGGGAGGAGCAATATCTCAAAAGCTACTTCTGAGAGAGATATCAAAGAATTCCTTTCATTCTCTGGTCAAATCCTTTATGTTGAAATGCAAAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATGAGGATTCTCAAGGAGCAGATACTGCAATACTTTTAACTGGTGCAAAAATTGGTGATCTATTTGTATCAATTACTCTGGTTGAGAATTACCATCTTCCACCTGAAGCAATGTCATCAATCCTGGATAAAAGGAAAACTGCTACCAGGATTGCTCCGAGTCAGGCTGAAGACGTTGTAAGTACAATGCTCGCAAAAGGCTTCATCTTGGGGAAGGATGCTCTCAACAAGGCAAAAGCGTTCGACGAACGACTCCAATTGACATCAAACGCTTCTGCAACTGTCGCTTCCATTGACAGGAAGATGGGTATAACTGAGAAAATAACTGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTACGGAGAAGACGAAATCCGCTCTAGCAGTTGCCGAGCAGAAGGCAAGCAACGCTGGGACTGCGCTCATGAGCAACTATTACGTGTTAACTGGAGCAGCTTGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCCGAGGAAGTGACCCAGATGACAAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAGAGGAGAGTATATACCACGAAAGAACCGGGATCATCAATAACTTCGCCGAGTTCCATCTCGACGAGCCTTTACCGGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAGACAGTAAGTTGTGAATCATACGCATGAAAACCTACACTTGTGAAATACATTGCTTTCCCCAATCAACTGTATGATATATACATTTTCATCTAGAGGTGCTCCAATTACAGGGTTTACTTCTTTATACACCTGCTCCTGTTGAAATGTCATGACGTTCTTTTGAGTGAAAAATTCACTTTTTGAATACTTGATTATACAAT

Coding sequence (CDS)

ATGGAAACGGACTGTCTTGATACGCTTTTGAATACAAAATTCTTCACTCCTTGCAATCTTCATCCTAGTCTCCAGACATATAAATTCTGCATTGATTGTAGTGTTAGCTTCTGCACGAATTGTACAGTCCGTAATCTTCATGGGCAGGTTCGTATCTGGAGATATTCCTATCATGATGTTGTGCGCGTTCAGTCATATCGAGTCAATGGTGAAATAGCTGTTCATCTAAACTCCCGTGGTCAACCCGTCGACACCAAATCACCAAAGCGGAAGTTTGGTGATTTTTGTGAAGATTGTGGCAGAAGTGTTTCTGTGAACTCAAAGTTCAAGGAACAGATCATTGGAACCATCATATATCCGAGCCCGGAATCCATTTACTTATCATTCAAGGAAAAAAGCAGCCCAGAAACAGAAGCATGGGAATTGGAATCAACCATATCAGTTGCAGAGTCCACAGAAGAGACCCAAGCTACCTCTTCATCTTCAAGGCCAAGAAAACGCAGAAGGAAAGGCATCCCTCGCAGTCTTGGCCGCTACCGACGATGGCGACGTGGGAAGGATGGAGGTGTTTATGCACGCAGCGATGATGGGAGGAGCAATATCTCAAAAGCTACTTCTGAGAGAGATATCAAAGAATTCCTTTCATTCTCTGGTCAAATCCTTTATGTTGAAATGCAAAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATGAGGATTCTCAAGGAGCAGATACTGCAATACTTTTAACTGGTGCAAAAATTGGTGATCTATTTGTATCAATTACTCTGGTTGAGAATTACCATCTTCCACCTGAAGCAATGTCATCAATCCTGGATAAAAGGAAAACTGCTACCAGGATTGCTCCGAGTCAGGCTGAAGACGTTGTAAGTACAATGCTCGCAAAAGGCTTCATCTTGGGGAAGGATGCTCTCAACAAGGCAAAAGCGTTCGACGAACGACTCCAATTGACATCAAACGCTTCTGCAACTGTCGCTTCCATTGACAGGAAGATGGGTATAACTGAGAAAATAACTGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTACGGAGAAGACGAAATCCGCTCTAGCAGTTGCCGAGCAGAAGGCAAGCAACGCTGGGACTGCGCTCATGAGCAACTATTACGTGTTAACTGGAGCAGCTTGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCCGAGGAAGTGACCCAGATGACAAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAGAGGAGAGTATATACCACGAAAGAACCGGGATCATCAATAACTTCGCCGAGTTCCATCTCGACGAGCCTTTACCGGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAG

Protein sequence

METDCLDTLLNTKFFTPCNLHPSLQTYKFCIDCSVSFCTNCTVRNLHGQVRIWRYSYHDVVRVQSYRVNGEIAVHLNSRGQPVDTKSPKRKFGDFCEDCGRSVSVNSKFKEQIIGTIIYPSPESIYLSFKEKSSPETEAWELESTISVAESTEETQATSSSSRPRKRRRKGIPRSLGRYRRWRRGKDGGVYARSDDGRSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

Homology

[Close]

BLAST of CmoCh04G011100 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-52
Identity = 118/225 (52.44%), Postives = 161/225 (71.56%), Query Frame = 0


Query: 200 NISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDL 259
           N+S   +E DIKEF SFSG++  +++Q    N   AYVT++++QGA+TA+LL+GA I D 
Sbjct: 12  NLSSGATEHDIKEFFSFSGEVESIDIQ---SNEHSAYVTFKETQGAETAVLLSGASIADQ 71

Query: 260 FVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKAF 319
            V I L  NY  PP A  +  + + +       +AEDVVS+MLAKGFILGKDA+ KAKAF
Sbjct: 72  SVIIELAPNYS-PPAAPHA--ETQSSGAESVVQKAEDVVSSMLAKGFILGKDAVGKAKAF 131

Query: 320 DERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQ 379
           DE+   TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQVTE+TKS  A AEQ
Sbjct: 132 DEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVYAAAEQ 191

Query: 380 KASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVE 425
             S+AG+A+M N YVLTG +W + A   V +AA EV Q TK KVE
Sbjct: 192 TVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVE 230

[Close]

BLAST of CmoCh04G011100 vs. ExPASy TrEMBL
Match: A0A6J1FNT8 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447469 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.7e-138
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD
Sbjct: 7   SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 66

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 67  LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 126

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 127 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 186

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER
Sbjct: 187 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 246

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGIINNFAEFHLDEPLPGEPAIVPVNSADR
Sbjct: 247 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 276

[Close]

BLAST of CmoCh04G011100 vs. ExPASy TrEMBL
Match: A0A6J1FR87 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447469 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.7e-138
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD
Sbjct: 9   SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 68

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 69  LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 128

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 129 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 188

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER
Sbjct: 189 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 248

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGIINNFAEFHLDEPLPGEPAIVPVNSADR
Sbjct: 249 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of CmoCh04G011100 vs. ExPASy TrEMBL
Match: A0A6J1JSR7 (binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111487193 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 2.4e-137
Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD
Sbjct: 9   SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 68

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           LFVSITLVENYHLPPEAMSSILDKRKTAT IAP+QAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 69  LFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAEDVVSTMLAKGFILGKDALNKAKA 128

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 129 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 188

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER
Sbjct: 189 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 248

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGIINNFAEFHLDEPLPGEPAIVPVNSADR
Sbjct: 249 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of CmoCh04G011100 vs. ExPASy TrEMBL
Match: A0A5A7UTK1 (Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00920 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 2.7e-128
Identity = 251/270 (92.96%), Postives = 261/270 (96.67%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISK TSERDIKEF SFSG+ILYVEMQRE+ENTQVAYVTY+DSQGADTAILLTGAKIGD
Sbjct: 7   SNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGD 66

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           L V+ITLVENYHLPPEAMSSILDKR+T T IAP+QAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 67  LSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGKDALNKAKA 126

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 127 FDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 186

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKA++AGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK+ESIY ER
Sbjct: 187 QKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRER 246

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGII+NFAE HLDEPLPGEPAIVPVNSADR
Sbjct: 247 TGIISNFAELHLDEPLPGEPAIVPVNSADR 276

[Close]

BLAST of CmoCh04G011100 vs. ExPASy TrEMBL
Match: A0A1S3BT66 (binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493460 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 2.7e-128
Identity = 251/270 (92.96%), Postives = 261/270 (96.67%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISK TSERDIKEF SFSG+ILYVEMQRE+ENTQVAYVTY+DSQGADTAILLTGAKIGD
Sbjct: 7   SNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLTGAKIGD 66

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           L V+ITLVENYHLPPEAMSSILDKR+T T IAP+QAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 67  LSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGKDALNKAKA 126

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 127 FDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 186

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKA++AGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK+ESIY ER
Sbjct: 187 QKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESIYRER 246

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGII+NFAE HLDEPLPGEPAIVPVNSADR
Sbjct: 247 TGIISNFAELHLDEPLPGEPAIVPVNSADR 276

[Close]

BLAST of CmoCh04G011100 vs. NCBI nr
Match: XP_022942420.1 (binding partner of ACD11 1-like isoform X2 [Cucurbita moschata] >XP_022942421.1 binding partner of ACD11 1-like isoform X2 [Cucurbita moschata] >XP_022942422.1 binding partner of ACD11 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 502.7 bits (1293), Expect = 3.5e-138
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD
Sbjct: 7   SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 66

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 67  LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 126

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 127 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 186

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER
Sbjct: 187 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 246

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGIINNFAEFHLDEPLPGEPAIVPVNSADR
Sbjct: 247 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 276

[Close]

BLAST of CmoCh04G011100 vs. NCBI nr
Match: XP_022942419.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 502.7 bits (1293), Expect = 3.5e-138
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD
Sbjct: 9   SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 68

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 69  LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 128

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 129 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 188

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER
Sbjct: 189 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 248

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGIINNFAEFHLDEPLPGEPAIVPVNSADR
Sbjct: 249 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of CmoCh04G011100 vs. NCBI nr
Match: XP_022990263.1 (binding partner of ACD11 1-like [Cucurbita maxima] >KAG6600857.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031492.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498.8 bits (1283), Expect = 5.0e-137
Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD
Sbjct: 9   SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 68

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           LFVSITLVENYHLPPEAMSSILDKRKTAT IAP+QAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 69  LFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAEDVVSTMLAKGFILGKDALNKAKA 128

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 129 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 188

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER
Sbjct: 189 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 248

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGIINNFAEFHLDEPLPGEPAIVPVNSADR
Sbjct: 249 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of CmoCh04G011100 vs. NCBI nr
Match: XP_023537354.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 497.7 bits (1280), Expect = 1.1e-136
Identity = 267/270 (98.89%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD
Sbjct: 9   SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 68

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           LFVSITLVENYHLPPEAMSSILDKRKTAT IAP+QAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 69  LFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAEDVVSTMLAKGFILGKDALNKAKA 128

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 129 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 188

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKA+EEKEESIYHER
Sbjct: 189 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKADEEKEESIYHER 248

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGIINNFAEFHLDEPLPGEPAIVPVNSADR
Sbjct: 249 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of CmoCh04G011100 vs. NCBI nr
Match: XP_023537363.1 (binding partner of ACD11 1-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023537371.1 binding partner of ACD11 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 497.7 bits (1280), Expect = 1.1e-136
Identity = 267/270 (98.89%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD
Sbjct: 7   SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 66

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           LFVSITLVENYHLPPEAMSSILDKRKTAT IAP+QAEDVVSTMLAKGFILGKDALNKAKA
Sbjct: 67  LFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAEDVVSTMLAKGFILGKDALNKAKA 126

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE
Sbjct: 127 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 186

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKA+EEKEESIYHER
Sbjct: 187 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKADEEKEESIYHER 246

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 469
           TGIINNFAEFHLDEPLPGEPAIVPVNSADR
Sbjct: 247 TGIINNFAEFHLDEPLPGEPAIVPVNSADR 276

[Close]

BLAST of CmoCh04G011100 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 250.0 bits (637), Expect = 3.8e-66
Identity = 142/258 (55.04%), Postives = 183/258 (70.93%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SN+S   ++RD+KEF SFSG ILY+E Q ETE T++AYVT++D QGA+TA+LL+GA I D
Sbjct: 9   SNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGATIVD 68

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPS----QAEDVVSTMLAKGFILGKDALN 318
             V +++  +Y L PEA++S+  K    +  A      +AEDVVS+MLAKGFILGKDA+ 
Sbjct: 69  SSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGFILGKDAIA 128

Query: 319 KAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSAL 378
           KAK+ DE+ QLTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QV+EKTKSA+
Sbjct: 129 KAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQVSEKTKSAI 188

Query: 379 AVAEQKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESI 438
           A AEQ  SNAG+A+M N YVLTGA W + A   V KAAEEV Q  K KV  AEEE     
Sbjct: 189 AAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMAEEE----- 248

Query: 439 YHERTGIINNFAEFHLDE 453
             ++  +++ FA  HL E
Sbjct: 249 --DKRKVVDEFARVHLSE 259

[Close]

BLAST of CmoCh04G011100 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 246.5 bits (628), Expect = 4.2e-65
Identity = 138/262 (52.67%), Postives = 187/262 (71.37%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SN+S   +ERD+KEF SFSG I Y+E Q E + +++AYVT++D QGA+TA+LLTG+ I D
Sbjct: 9   SNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGSTIVD 68

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPS--------QAEDVVSTMLAKGFILGK 318
             V++T+  +Y LPP+A++SI   +++    +P+        +AEDVVS M++KGF+LGK
Sbjct: 69  SSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMISKGFVLGK 128

Query: 319 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKT 378
           DA+ KAK+ DE+ QLTS ASA V S D+++G TEKI  GT VV+EKV+E+D+ FQVTEKT
Sbjct: 129 DAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVDQKFQVTEKT 188

Query: 379 KSALAVAEQKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 438
           KSA+A AEQ  SNAG+A+M N YVLTGA W + A   V+KAAEEV Q  K KV  AEEE+
Sbjct: 189 KSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKEKVGLAEEEE 248

Query: 439 EESIYHERTGIINNFAEFHLDE 453
           E     E+  +++  A  HL E
Sbjct: 249 E-----EKKKVVDEVAIVHLTE 265

[Close]

BLAST of CmoCh04G011100 vs. TAIR 10
Match: AT1G67950.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 243.4 bits (620), Expect = 3.6e-64
Identity = 144/265 (54.34%), Postives = 185/265 (69.81%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SN+S   S++D+KEF SFSG I YVEM+ ET+ +QVAYVT++DSQGA+TA+LLTGA I D
Sbjct: 34  SNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLTGAVIAD 93

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           L VSIT   NY LPPEA++  LD   +    +  +AEDVV+ M+ +G+ LGKDA+ KAKA
Sbjct: 94  LRVSITPAVNYQLPPEALA--LDSEHSFNGFSVKKAEDVVNIMVGRGYALGKDAMEKAKA 153

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE
Sbjct: 154 FDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKSALAAAE 213

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           + A +A TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E ++E I    
Sbjct: 214 ETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRKEII---- 273

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPV 464
                      LD   P  PA+VPV
Sbjct: 274 ----------TLDPSSPKVPAVVPV 275

[Close]

BLAST of CmoCh04G011100 vs. TAIR 10
Match: AT1G67950.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 243.4 bits (620), Expect = 3.6e-64
Identity = 144/265 (54.34%), Postives = 185/265 (69.81%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SN+S   S++D+KEF SFSG I YVEM+ ET+ +QVAYVT++DSQGA+TA+LLTGA I D
Sbjct: 35  SNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLTGAVIAD 94

Query: 259 LFVSITLVENYHLPPEAMSSILDKRKTATRIAPSQAEDVVSTMLAKGFILGKDALNKAKA 318
           L VSIT   NY LPPEA++  LD   +    +  +AEDVV+ M+ +G+ LGKDA+ KAKA
Sbjct: 95  LRVSITPAVNYQLPPEALA--LDSEHSFNGFSVKKAEDVVNIMVGRGYALGKDAMEKAKA 154

Query: 319 FDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAE 378
           FD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE
Sbjct: 155 FDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKSALAAAE 214

Query: 379 QKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHER 438
           + A +A TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E ++E I    
Sbjct: 215 ETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRKEII---- 274

Query: 439 TGIINNFAEFHLDEPLPGEPAIVPV 464
                      LD   P  PA+VPV
Sbjct: 275 ----------TLDPSSPKVPAVVPV 276

[Close]

BLAST of CmoCh04G011100 vs. TAIR 10
Match: AT1G67950.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 240.0 bits (611), Expect = 3.9e-63
Identity = 144/266 (54.14%), Postives = 187/266 (70.30%), Query Frame = 0


Query: 199 SNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGD 258
           SN+S   S++D+KEF SFSG I YVEM+ ET+ +QVAYVT++DSQGA+TA+LLTGA I D
Sbjct: 34  SNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLTGAVIAD 93

Query: 259 LFVSITLVENYHLPPEAMSSILDKRK-TATRIAPSQAEDVVSTMLAKGFILGKDALNKAK 318
           L VSIT   NY LPPEA++  LD ++ +    +  +AEDVV+ M+ +G+ LGKDA+ KAK
Sbjct: 94  LRVSITPAVNYQLPPEALA--LDSQEHSFNGFSVKKAEDVVNIMVGRGYALGKDAMEKAK 153

Query: 319 AFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVA 378
           AFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA A
Sbjct: 154 AFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKSALAAA 213

Query: 379 EQKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHE 438
           E+ A +A TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E ++E I   
Sbjct: 214 EETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRKEII--- 273

Query: 439 RTGIINNFAEFHLDEPLPGEPAIVPV 464
                       LD   P  PA+VPV
Sbjct: 274 -----------TLDPSSPKVPAVVPV 276

The following BLAST results are available for this feature:

BLAST of CmoCh04G011100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.4e-52	52.44	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of CmoCh04G011100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNT8	1.7e-138	100.00	binding partner of ACD11 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1FR87	1.7e-138	100.00	binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JSR7	2.4e-137	99.26	binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111487193 PE=4...	[more]
A0A5A7UTK1	2.7e-128	92.96	Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BT66	2.7e-128	92.96	binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034934...	[more]

BLAST of CmoCh04G011100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942420.1	3.5e-138	100.00	binding partner of ACD11 1-like isoform X2 [Cucurbita moschata] >XP_022942421.1 ...	[more]
XP_022942419.1	3.5e-138	100.00	binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022990263.1	5.0e-137	99.26	binding partner of ACD11 1-like [Cucurbita maxima] >KAG6600857.1 Binding partner...	[more]
XP_023537354.1	1.1e-136	98.89	binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023537363.1	1.1e-136	98.89	binding partner of ACD11 1-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_0235...	[more]

BLAST of CmoCh04G011100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	3.8e-66	55.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	4.2e-65	52.67	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.1	3.6e-64	54.34	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.2	3.6e-64	54.34	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.3	3.9e-63	54.14	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 409..431
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..174
None	No IPR available	PANTHER	PTHR32343:SF29	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 199..467
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 199..467
None	No IPR available	SUPERFAMILY	57845	B-box zinc-binding domain	coord: 16..52
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 200..258 e-value: 6.3E-6 score: 25.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 199..268 score: 8.637593
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 199..264 e-value: 1.4E-7 score: 33.3
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 18..63 score: 8.901578
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 199..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G011100.1	CmoCh04G011100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding