
CmoCh04G010420 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGTCGTGAGAAGCGCGCAGACCAGCCATTGTTGTAGCTACACGTGCTTTCTTCCCGGATCGGCCCTCTCCTGCGGTGGCACCCATTTTTCTGCGGCCGAGACACACTCCGTCGACTCCGGACCCTATTTTATCGTCCTCTGAATCCAATCCCGAACTTATTTCTAGCTAACCCTCAAGCATTCACTTCCATTTTCCTTTTTCATTTTCGCATTCTTGTCCAATTTCTTCAACCCATCTCGCTGTTCTGCAGCAATGGCTGTCAATTCGTCGACCCATTTCGCTCCCCCGCCGCTTCGTTCACTGCCTCGTTCCTCTTTCGCTTTCTTTTCTCGCATCTTTTTTCACCCTGTTTCGGCCACTGGCTTCCGTAGGCGGAGCCTTGTCTTGGTTCGTGCCCAAGCGCCCAGTACCGATGGCTGTGGATCCAACCAGCCGCTCGGTTTGGAGGAATCGGGACCTTCGCTCGGGTCCACTGGTTCGCCGTCCTCGTCCTCGGTGATTGATTTCCTCACATTGTGCCATCGTCTTAAGGTATTCGCACAATTTGGCTAATGAGAAACTGGGGGGGATTTTCCCCCCCAATTTATTATTAACCTTTTGTTCTTTACTGATTCATGGAGAATATCAAATGAACTTTAAGTAAGTTGGGTGAGTGGCTTATTCTTGATTTATTTGGGCAATTAGAATTCATTTTGGGAAACTTTTCATTGTTGGCAGAGGAACTGATATTTGTTTATGCGTGTTATGGGAGAAACGAGGTGATCAGAAAATTATGGCCATTAGAGGTAATAATCATTTGGCTATTCTCTCTTCCATGTAGACAACAAAGAGAAAGGGGTGGATCAATCATGGAATAAATGGTCCTGAATCAATTGCTGATCATATGTACCGCATGGCTCTGATGAGTTTGATAACTGATGACCTTCCAGGAGTGAACAGAGAAAGGTTGCTCTTCTTCTTCTTCACCTGGAAATTTAATAATCTGGTACGAAGATCCTTTTATTGAACTTTGTTTCACTCTTTTCTTGTTCTACTTTGACCAGGTGTATCAAGATAGCTCTTGTTCATGATATTGCTGAAGGTACTTTCTAACACTTTTTTTCCCCTTAATTTCCATAACTTTATTCTAGCAATTATGCATCTTTCTGTCAAGTAATGATATTGTTATTCAACTTATGGAGATAGGATTACTTTAATTCGTTGGTTTTGAGAGCTATCTCGACATATTTTCTCTTGTAATGGCCCAAGCCCACAACTATCAAATATTGTTCTCTTTGGGGCTTTCCTTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCTTATGCTAGGGAGAGGTTTACACACCCTTATAAAGAATGCTTTGTTCTCCTCCCCAACCGATGTGGGATCTCACATCTCCCCTTTGAAAGGGTCCCCATACCTGGCAGTAAAACTTTGGAGAAGTTATGGGGAATTTCTTATGGGATGGGATTAATGAGGGAAAGAGGCCTCCTTTATTGAGGTGGGATATAGTGGGCAAGCAATTGAATCGTAATGGTTGATATTGTATTTGGACTATGATAGCTATTGTTGGAGATATAACGCCATCTGATGGTGTGCCAAAAGAAGAAAAGAGCAGAAGAGAGTCAGCAGCCCTAAATGAAATATGCCAACTTCTTGGTGGAGGCAAGAGAGGTACGAAAATGTTCTTATGATGTGGGTTTGGTTAGTAGTCGAAAACGTATTGCCATTAAATCACGTTCCTTTTTTCTTTTTGGTTCTTGAATATTTTCAGCCGACGAGATCAAAGAACTTTGGACCGAGTATGAAAACAATTCTTCTTTGGAGGCTAATCTTGTGAAAGACTTTGATAAAGTATGTATCCCAAAATTACTTCATTGATGAAAGTGGTGGCATATGGAAAAACATGTTGTCTGAGTTTCATCTCAATAAACTATCCACAAATTGTAGTGTTGGTTATAGAAGATTTTGTTTCCTTTTTAGTATAAGTAATGTAAAGTTGATATTTTACGTGTTACACTCGTATTGACACTTACATAAGATTTAGAACTCTCATTTTCTGAAAGTTGTATATTTTGTAGGTCGAATTAATTCTTCAAGCATTTGAATATGAAATAGGTAACTACGAAGCTTTGTTCTGGCTGCAGTATAGATATTAGTCGTTTGAAATTTGACATGAATTTCATTACACTGGCAGAACATGGGAAGGTGCTGGATGAGTTTTTCCTTTCAACGGCTGGTACATTCGTCCTGCTTTGCCTTTTTTTAGTTAAAACTATAAATTTAATCCACAAATTTAGTGATTGTCCTTTTCAGTTCCTCAACATTACAAAGTTTCAATTTAACTAATGCATGATGGTTTTTGTGGTAATGGGTGGCACCAAGGATGAGGGGCAGCTCAATAAAACAAGGGCCTCTCGTGCTACATCGTGCCAAACGATCATGCTTTAGTATAATATCATGTCATGTCATGTCAATATTTAAGTATCGGTGTTCGGCGTATACTTATTAATGATAAAAACGTGGTTTGTTTAGACAATAAGTTATGTATGCTTTTGCATTTTTCAGGAAAATTTCAGACGGAGGTAGGAAAGAGTTGGGCAGCGGAGGTAATGTCCAGAAGAAATTGTAGATTGAGAAACAACCAAAACTGATGTTCTAGGTACTTCTTCCTATATTGTTCATCCAACTTTACTTATACAAGCTAAAGAAGTTGGAATTTGTGTATTTTAGAACAACACACTCTCCTGGTGATGGCTTCTTAAATGCCTCCGAATCTAATGAAATGAACTTGAAAAGGAAAGAAAAAGAAAAA AGAAGTCGTGAGAAGCGCGCAGACCAGCCATTGTTGTAGCTACACGTGCTTTCTTCCCGGATCGGCCCTCTCCTGCGGTGGCACCCATTTTTCTGCGGCCGAGACACACTCCGTCGACTCCGGACCCTATTTTATCGTCCTCTGAATCCAATCCCGAACTTATTTCTAGCTAACCCTCAAGCATTCACTTCCATTTTCCTTTTTCATTTTCGCATTCTTGTCCAATTTCTTCAACCCATCTCGCTGTTCTGCAGCAATGGCTGTCAATTCGTCGACCCATTTCGCTCCCCCGCCGCTTCGTTCACTGCCTCGTTCCTCTTTCGCTTTCTTTTCTCGCATCTTTTTTCACCCTGTTTCGGCCACTGGCTTCCGTAGGCGGAGCCTTGTCTTGGTTCGTGCCCAAGCGCCCAGTACCGATGGCTGTGGATCCAACCAGCCGCTCGGTTTGGAGGAATCGGGACCTTCGCTCGGGTCCACTGGTTCGCCGTCCTCGTCCTCGGTGATTGATTTCCTCACATTGTGCCATCGTCTTAAGACAACAAAGAGAAAGGGGTGGATCAATCATGGAATAAATGGTCCTGAATCAATTGCTGATCATATGTACCGCATGGCTCTGATGAGTTTGATAACTGATGACCTTCCAGGAGTGAACAGAGAAAGGTGTATCAAGATAGCTCTTGTTCATGATATTGCTGAAGCTATTGTTGGAGATATAACGCCATCTGATGGTGTGCCAAAAGAAGAAAAGAGCAGAAGAGAGTCAGCAGCCCTAAATGAAATATGCCAACTTCTTGGTGGAGGCAAGAGAGCCGACGAGATCAAAGAACTTTGGACCGAGTATGAAAACAATTCTTCTTTGGAGGCTAATCTTGTGAAAGACTTTGATAAAGTCGAATTAATTCTTCAAGCATTTGAATATGAAATAGAACATGGGAAGGTGCTGGATGAGTTTTTCCTTTCAACGGCTGGAAAATTTCAGACGGAGGTAGGAAAGAGTTGGGCAGCGGAGGTAATGTCCAGAAGAAATTGTAGATTGAGAAACAACCAAAACTGATGTTCTAGGTACTTCTTCCTATATTGTTCATCCAACTTTACTTATACAAGCTAAAGAAGTTGGAATTTGTGTATTTTAGAACAACACACTCTCCTGGTGATGGCTTCTTAAATGCCTCCGAATCTAATGAAATGAACTTGAAAAGGAAAGAAAAAGAAAAA ATGGCTGTCAATTCGTCGACCCATTTCGCTCCCCCGCCGCTTCGTTCACTGCCTCGTTCCTCTTTCGCTTTCTTTTCTCGCATCTTTTTTCACCCTGTTTCGGCCACTGGCTTCCGTAGGCGGAGCCTTGTCTTGGTTCGTGCCCAAGCGCCCAGTACCGATGGCTGTGGATCCAACCAGCCGCTCGGTTTGGAGGAATCGGGACCTTCGCTCGGGTCCACTGGTTCGCCGTCCTCGTCCTCGGTGATTGATTTCCTCACATTGTGCCATCGTCTTAAGACAACAAAGAGAAAGGGGTGGATCAATCATGGAATAAATGGTCCTGAATCAATTGCTGATCATATGTACCGCATGGCTCTGATGAGTTTGATAACTGATGACCTTCCAGGAGTGAACAGAGAAAGGTGTATCAAGATAGCTCTTGTTCATGATATTGCTGAAGCTATTGTTGGAGATATAACGCCATCTGATGGTGTGCCAAAAGAAGAAAAGAGCAGAAGAGAGTCAGCAGCCCTAAATGAAATATGCCAACTTCTTGGTGGAGGCAAGAGAGCCGACGAGATCAAAGAACTTTGGACCGAGTATGAAAACAATTCTTCTTTGGAGGCTAATCTTGTGAAAGACTTTGATAAAGTCGAATTAATTCTTCAAGCATTTGAATATGAAATAGAACATGGGAAGGTGCTGGATGAGTTTTTCCTTTCAACGGCTGGAAAATTTCAGACGGAGGTAGGAAAGAGTTGGGCAGCGGAGGTAATGTCCAGAAGAAATTGTAGATTGAGAAACAACCAAAACTGA MAVNSSTHFAPPPLRSLPRSSFAFFSRIFFHPVSATGFRRRSLVLVRAQAPSTDGCGSNQPLGLEESGPSLGSTGSPSSSSVIDFLTLCHRLKTTKRKGWINHGINGPESIADHMYRMALMSLITDDLPGVNRERCIKIALVHDIAEAIVGDITPSDGVPKEEKSRRESAALNEICQLLGGGKRADEIKELWTEYENNSSLEANLVKDFDKVELILQAFEYEIEHGKVLDEFFLSTAGKFQTEVGKSWAAEVMSRRNCRLRNNQN Homology
BLAST of CmoCh04G010420 vs. ExPASy Swiss-Prot
Match: P87242 (5'-deoxynucleotidase hdd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hdd1 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 4.0e-41 Identity = 92/182 (50.55%), Postives = 120/182 (65.93%), Query Frame = 0
BLAST of CmoCh04G010420 vs. ExPASy Swiss-Prot
Match: Q3SXD3 (5'-deoxynucleotidase HDDC2 OS=Mus musculus OX=10090 GN=Hddc2 PE=1 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 7.5e-40 Identity = 91/193 (47.15%), Postives = 124/193 (64.25%), Query Frame = 0
BLAST of CmoCh04G010420 vs. ExPASy Swiss-Prot
Match: Q54FK1 (5'-deoxynucleotidase HDDC2 OS=Dictyostelium discoideum OX=44689 GN=hddc2 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39 Identity = 89/189 (47.09%), Postives = 122/189 (64.55%), Query Frame = 0
BLAST of CmoCh04G010420 vs. ExPASy Swiss-Prot
Match: Q7Z4H3 (5'-deoxynucleotidase HDDC2 OS=Homo sapiens OX=9606 GN=HDDC2 PE=1 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39 Identity = 85/163 (52.15%), Postives = 114/163 (69.94%), Query Frame = 0
BLAST of CmoCh04G010420 vs. ExPASy Swiss-Prot
Match: Q1LUI2 (5'-deoxynucleotidase HDDC2 OS=Danio rerio OX=7955 GN=hddc2 PE=2 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.7e-39 Identity = 86/162 (53.09%), Postives = 109/162 (67.28%), Query Frame = 0
BLAST of CmoCh04G010420 vs. ExPASy TrEMBL
Match: A0A6J1FLN1 (5'-deoxynucleotidase OS=Cucurbita moschata OX=3662 GN=LOC111446937 PE=3 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 3.3e-147 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CmoCh04G010420 vs. ExPASy TrEMBL
Match: A0A6J1JQ82 (5'-deoxynucleotidase OS=Cucurbita maxima OX=3661 GN=LOC111487961 PE=3 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 6.9e-137 Identity = 251/265 (94.72%), Postives = 254/265 (95.85%), Query Frame = 0
BLAST of CmoCh04G010420 vs. ExPASy TrEMBL
Match: A0A6J1HYV3 (5'-deoxynucleotidase OS=Cucurbita maxima OX=3661 GN=LOC111468905 PE=3 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 9.0e-129 Identity = 237/265 (89.43%), Postives = 244/265 (92.08%), Query Frame = 0
BLAST of CmoCh04G010420 vs. ExPASy TrEMBL
Match: A0A6J1EQE3 (5'-deoxynucleotidase OS=Cucurbita moschata OX=3662 GN=LOC111435665 PE=3 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.8e-128 Identity = 237/265 (89.43%), Postives = 242/265 (91.32%), Query Frame = 0
BLAST of CmoCh04G010420 vs. ExPASy TrEMBL
Match: A0A0A0LHY9 (5'-deoxynucleotidase OS=Cucumis sativus OX=3659 GN=Csa_2G116270 PE=3 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122 Identity = 228/265 (86.04%), Postives = 237/265 (89.43%), Query Frame = 0
BLAST of CmoCh04G010420 vs. NCBI nr
Match: XP_022941636.1 (HD domain-containing protein C4G3.17-like [Cucurbita moschata] >XP_022941637.1 HD domain-containing protein C4G3.17-like [Cucurbita moschata]) HSP 1 Score: 530.8 bits (1366), Expect = 6.8e-147 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CmoCh04G010420 vs. NCBI nr
Match: KAG6600790.1 (hypothetical protein SDJN03_06023, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 511.9 bits (1317), Expect = 3.3e-141 Identity = 258/265 (97.36%), Postives = 259/265 (97.74%), Query Frame = 0
BLAST of CmoCh04G010420 vs. NCBI nr
Match: XP_023545970.1 (HD domain-containing protein C4G3.17-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 505.8 bits (1301), Expect = 2.3e-139 Identity = 255/265 (96.23%), Postives = 257/265 (96.98%), Query Frame = 0
BLAST of CmoCh04G010420 vs. NCBI nr
Match: XP_022991251.1 (HD domain-containing protein C4G3.17-like [Cucurbita maxima]) HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136 Identity = 251/265 (94.72%), Postives = 254/265 (95.85%), Query Frame = 0
BLAST of CmoCh04G010420 vs. NCBI nr
Match: KAG7031428.1 (HD domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 480.3 bits (1235), Expect = 1.1e-131 Identity = 247/279 (88.53%), Postives = 254/279 (91.04%), Query Frame = 0
BLAST of CmoCh04G010420 vs. TAIR 10
Match: AT1G26160.1 (Metal-dependent phosphohydrolase ) HSP 1 Score: 328.9 bits (842), Expect = 3.6e-90 Identity = 175/266 (65.79%), Postives = 201/266 (75.56%), Query Frame = 0
BLAST of CmoCh04G010420 vs. TAIR 10
Match: AT2G23820.2 (Metal-dependent phosphohydrolase ) HSP 1 Score: 267.7 bits (683), Expect = 1.0e-71 Identity = 137/229 (59.83%), Postives = 170/229 (74.24%), Query Frame = 0
BLAST of CmoCh04G010420 vs. TAIR 10
Match: AT2G23820.1 (Metal-dependent phosphohydrolase ) HSP 1 Score: 241.1 bits (614), Expect = 1.0e-63 Identity = 126/213 (59.15%), Postives = 154/213 (72.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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