CmoCh04G010080 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G010080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Basic helix-loop-helix transcription factor
Location	Cmo_Chr04: 5073534 .. 5077676 (-)
RNA-Seq Expression	CmoCh04G010080
Synteny	CmoCh04G010080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGTGGACAATAATAATATTAAAATAAAATAGGAAAATTCCAACGCCACTATCATTTCCATAAACTTTACCCAATCACCATCCAACTTAATGGGAATCATTCTCATACCCTTTTATGCAAGCTAAGCTAATTTATTTGTCTTTTCGGAAGTGCTTAGCTTGCATGGGCTGTCTTCTCCTCCCATTAATTCTCTTTTAAATTACATATTTGCTTAATTTGCTCCCATTATTCGGATGGAAGCGACTACGAAGCTCAAATCTTCCTCGAAAAAAAATCAATTTATACGTCAAGATATATATAATAATATATATATATTATTATTATTATTATTATTATTATTATTATTAGAGAGAGAAAAATCAATTTCTTGATATTTTACAAACGCAAGAAAGTCTTAAAAATTGAAAATAATATTACATATATAAATATATAAGGAAAATGATTTTGGAGAGACATGAAGGCCCATTAAAACCTGAAAAGCCCATAAGGAAATATCATCAACATAGTGACGGAGGCGACGAATCTCTCGTTCCGACGACTACCCGCCACCACTTCTTTCTCATATTCCTCAAATCCCATTTCAGATTCTCCATTTTTTGTTCATACATTTTTGGCTCCAACTGCGACACACTTCTCTTAACGCTGGCCTCTCTCTTCTCTCTTTCACTTTACTGCTTTCAATTCGACGAAAATTCACGCTGGAAACATCGCCCTTCCTGCTCAATCACCATCAACGCGATATGGTATCCCCTGAAACCACCAATTGGCTCTTTGATTATGCGTTAATCGATGATATTCCTGTTCCTGATGATGTCAATTTCTCTGCACCTACTGCCGGTTTCTCTTGGTCCATGCAACCCTTCAACGCCTCCTCTGATGTCAGGTTTTATTTCTCTCTCATTTTCTTCGATTTTCCTGTTCTATCCGTTTGACAATCATATATTGTTATGTATGTGAAAGTTCCTTCGAGTCTGCATGTACGGACTTCTAGTTGTGATCTAGGATTCGACTGTGCTGGGATTTGAGATGGTCGTTTGATTTCATCTTTAGCTCGAAAGTAGTGCTGCAACTTTTTCTTTATAAAAGAACTTGATTGGGACTTGAAACTTGATCTTGCTTCTTCGAATTTGATAATCAGAAGATTTGTGTCTACATCTCCAACTTTCCTTTACTATCTAAATTTAGTAACTAATTTACCATGTAAGGAGAAACAGGATCACATGTTTGAGAATATCTGAGATTTCTATCTAGTTTCTTCATGTTCTTGGCTTTTTAGTCGAAGCTTGTAGGTTGTAAATTTAAATGGGTAGGTTTAAAATCTGCAGTATAAACTTATTCATTTCATCCAATAAAAAATTTCCCCCTTCAAGTGTTGTTCCAATCCATTCTCCCCCTTTAACTAGGGGAGTAGTCGGCACCCTTAAATTAATCATTTACTGAAGCTTAAATAACAAATAATAACCTGAAAATATGATCATATTAAATAATCGCCTTAAAATATAATTAGTTCAGTTAAAAGAAACTGTGTGTGATCTTCATTTTAATCTTTTGAAATGTAGTTTTCTCTTAGTCTGTACTCTTTTCATGTTAGACATTCAGTTCTTTATTAATTTCTTTCACTTTGGATTCGACAAAAGATAATTTGATCAAAGTAAAGCGTCCGTCTTATTTAACCAGCCCAAGCATGAACTTGTAATTTACATGTCTTTCAAGACTTCATTTCCTCAGGTTTATTTCTCAAATTGCTTGACTAGCATCTATGAATTAATGGAAGATGTTGAGGCCTGTTTTTAACTTAACTTTTTGCTTGTTTGAATTGTTGTTGTTTTTAATTTATTTCAACATTAACATTTCTACTATGTTAACAGAAACAGTGCCAATGTACTCATACAGTTTTTCCTGTGTTTGTGCCTCCAGTCTTTGATATGGAACAGTGACTTAATCCTTTGGTTACTGTCTTTGGACAGTATTTATTTTTGAAATATGTCATTGCATTTAATATTTTTTTTTTAAAAAAAAGAACTATTTTTCTCTCTCTTTCTCTCTCATCTGCAATTTTTCCTGTCATCTATTCTCATCCTCTCTGTCTTTTTAATTTTACCATTTCATTAAATTTTGCTTTTTCATGGTGGTGGTTGGTAGGGGGATATCATTTTTGTGTTTACTCATTAAACTTTTTGCTACATCTTTTACTAGTGCGGAAATTGAAGGATCATTGTTGGAATCAGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGGTAAATACCAACCTCTTGGCTCTTGATGATTCTTTGATTGCTAGTTAGTTTCCCTGCTTTTCTGTAATCCAAGTTCTCAGTGTATTTTTCATATTCTTGAGCCTCCAAGATTAGACATAGCATCATGATAGGAAAAAAGGGGAAATGAACATGTTGAGCCTCCAATTTCTCAGTGTATTTTTCATTTGCTAGTTAGTTTCGTTCTTCCAGTGTTTTTCTCTTCTCTTTCGTTTCAATTTCTTTATATTTCTTCCTATTTGCCAAAAACCAGCCATTCTCTTTTTTTATTTACTTATAAAATAATAAAAATAAGGTTTTGGAAAATTTTCCCTATGTGGAAACACAATCGAAGATCAAAGAATCTCGGCACATTTTGACTCCCTAAACTCAGCAAATGAAGCTGAGAGGCAGACTAAGATTTCCTTTGGGTTAGGGGAGGAGAGGCCGTTTCCAGCTCTTACTGTCTGGTTGCTATTCTTAGAAGTCCGGTAAAAGAAAGAACTATTTGCAAGCTGTTAAGATATCTTCTTTTAGGGGAAAATTTCATATAGCAATTGAATTTAACTTTTCACTCAATTACATTACATTATTAGAGTTGAAGGAATCTATATGGATGGTTGTAACGATACATATAGAACAAGTATGTTTTCTTGAACAAATTACTGAACCTCCTATTCCTCCCCCTGTCCCAAAGGGGAGTGAAAAGAAGAATAACTAACGAGCAATCAAATTAAACGCTGCAGGGTCAGAACTGAATCAAGTTGTGCATCTAGCTCAAAAGCATGTAGGGAGAAGCTGCGGAGGGACAGATTAAATGACAAGTAATCCTCCTCTTTGTTTCTCTCTCTCACACTTGCTTGATAATGCATATGCATGTACCGAGAAGCATATGTTTTATTTCTATAAGGAATGAGCATATGAAACTTGACAGATTTTTGGAATTGAGTGCTACTCTGGAGCCTGGAAGGGCACTGAAGACCGACAAGGCTGCCATTTTGATTGATGCTGTTCGAATGGTCACTCAGTTACGCGGTGAAGCCCAGGTGTTGAAGGACTCAAATACAAGCCTATTAGAGAAGATTAAAGATTTGAAGGTAGGTCTTGTACAATTATCTAACCGAGAAGAAACTTACTCTAATCTCTGAGTATAATCTCCAAGTATTTCCATTACATTAGTAAATTCCACTTGAAAGAATCTTGCGTACTGTAACATTAGTGAGGCGAGGATTTTGATTTGCGTACTTATAAGACTTCAAATTTTCACTTTTCCCACTTTTTTAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGCATAGGCTAAAACTGGAGAAGGAGAAGTTGGAGCAGCAACTAAAAGCCACGAATTCACAACCTGGCTTCATGCCTCCAGCCATCCCTGCAACTTTTGCAGCACAAGGCCAAGCACCTGGAAACAAGTTGGTTCCCTTCATTGGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCTGTTGACACCTCGCAAGATCACGTACTTCGACCCCCTGTTGCTTAATTAGGCAGCCAGAAAACTACCAGGGTGGGTTGGGATTGCATATTTTGACCCAAACATTTGTACTGATTCTACCATTGTTCTTGACACATACTTCAAAACTTCGTTTTAACTGGTGGATAATATGGTGGAATCATTGATCTTGACTGTATTTGCAACCTGTAGACTATTTATGGAATCAATGCTGGTTTTTACATGTAAAAATGTGAATAAGTTAATCCAGCATATGAATGTTCATGAGAAGAATAGGCATAACAATGTGATGTTTGCCTGCATTACAGCCAGAGAGACTGAATTTCCTCTTCTTTTTCTTCCCTCTTGAGTATCATCCGCTGGCCC

mRNA sequence

ATGGAAATTCTCCATTTTTTGTTCATACATTTTTGGCTCCAACTGCGACACACTTCTCTTAACGCTGGCCTCTCTCTTCTCTCTTTCACTTTACTGCTTTCAATTCGACGAAAATTCACGCTGGAAACATCGCCCTTCCTGCTCAATCACCATCAACGCGATATGGTATCCCCTGAAACCACCAATTGGCTCTTTGATTATGCGTTAATCGATGATATTCCTGTTCCTGATGATGTCAATTTCTCTGCACCTACTGCCGGTTTCTCTTGGTCCATGCAACCCTTCAACGCCTCCTCTGATGTCAGTGCGGAAATTGAAGGATCATTGTTGGAATCAGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGGGTCAGAACTGAATCAAGTTGTGCATCTAGCTCAAAAGCATGTAGGGAGAAGCTGCGGAGGGACAGATTAAATGACAAATTTTTGGAATTGAGTGCTACTCTGGAGCCTGGAAGGGCACTGAAGACCGACAAGGCTGCCATTTTGATTGATGCTGTTCGAATGGTCACTCAGTTACGCGGTGAAGCCCAGGTGTTGAAGGACTCAAATACAAGCCTATTAGAGAAGATTAAAGATTTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGCATAGGCTAAAACTGGAGAAGGAGAAGTTGGAGCAGCAACTAAAAGCCACGAATTCACAACCTGGCTTCATGCCTCCAGCCATCCCTGCAACTTTTGCAGCACAAGGCCAAGCACCTGGAAACAAGTTGGTTCCCTTCATTGGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCTGTTGACACCTCGCAAGATCACGTACTTCGACCCCCTGTTGCTTAATTAGGCAGCCAGAAAACTACCAGGGTGGGTTGGGATTGCATATTTTGACCCAAACATTTGTACTGATTCTACCATTGTTCTTGACACATACTTCAAAACTTCGTTTTAACTGGTGGATAATATGGTGGAATCATTGATCTTGACTGTATTTGCAACCTGTAGACTATTTATGGAATCAATGCTGGTTTTTACATGTAAAAATGTGAATAAGTTAATCCAGCATATGAATGTTCATGAGAAGAATAGGCATAACAATGTGATGTTTGCCTGCATTACAGCCAGAGAGACTGAATTTCCTCTTCTTTTTCTTCCCTCTTGAGTATCATCCGCTGGCCC

Coding sequence (CDS)

ATGGAAATTCTCCATTTTTTGTTCATACATTTTTGGCTCCAACTGCGACACACTTCTCTTAACGCTGGCCTCTCTCTTCTCTCTTTCACTTTACTGCTTTCAATTCGACGAAAATTCACGCTGGAAACATCGCCCTTCCTGCTCAATCACCATCAACGCGATATGGTATCCCCTGAAACCACCAATTGGCTCTTTGATTATGCGTTAATCGATGATATTCCTGTTCCTGATGATGTCAATTTCTCTGCACCTACTGCCGGTTTCTCTTGGTCCATGCAACCCTTCAACGCCTCCTCTGATGTCAGTGCGGAAATTGAAGGATCATTGTTGGAATCAGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGGGTCAGAACTGAATCAAGTTGTGCATCTAGCTCAAAAGCATGTAGGGAGAAGCTGCGGAGGGACAGATTAAATGACAAATTTTTGGAATTGAGTGCTACTCTGGAGCCTGGAAGGGCACTGAAGACCGACAAGGCTGCCATTTTGATTGATGCTGTTCGAATGGTCACTCAGTTACGCGGTGAAGCCCAGGTGTTGAAGGACTCAAATACAAGCCTATTAGAGAAGATTAAAGATTTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGCATAGGCTAAAACTGGAGAAGGAGAAGTTGGAGCAGCAACTAAAAGCCACGAATTCACAACCTGGCTTCATGCCTCCAGCCATCCCTGCAACTTTTGCAGCACAAGGCCAAGCACCTGGAAACAAGTTGGTTCCCTTCATTGGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCTGTTGACACCTCGCAAGATCACGTACTTCGACCCCCTGTTGCTTAA

Protein sequence

MEILHFLFIHFWLQLRHTSLNAGLSLLSFTLLLSIRRKFTLETSPFLLNHHQRDMVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDGLKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDAVRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQPGFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA

Homology

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BLAST of CmoCh04G010080 vs. ExPASy Swiss-Prot
Match: Q9FH37 (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-77
Identity = 168/240 (70.00%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSM-QPFNASSDVSAEIEGSLLESD 114
           MVSPE  NW+ D  LID     D  +F+    GFSW + QP   SS+ SA ++GS   S+
Sbjct: 1   MVSPENANWICD--LID----ADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSE 60

Query: 115 GLKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILID 174
             KEPGSKKR R ESS A+SSKACREK RRDRLNDKF+EL A LEPG   KTDKAAIL+D
Sbjct: 61  ASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVD 120

Query: 175 AVRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNS- 234
           AVRMVTQLRGEAQ LKDSN+SL +KIK+LK EKNELRDEK RLK EKEKLEQQLKA N+ 
Sbjct: 121 AVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAP 180

Query: 235 QPGFM--PPAIPATFA-AQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           QP F   PP +P  FA AQGQAPGNK+VP I YPGVAMWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 181 QPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of CmoCh04G010080 vs. ExPASy Swiss-Prot
Match: Q9C682 (Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.4e-69
Identity = 146/236 (61.86%), Postives = 173/236 (73.31%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPE TNWL DY LI+         FS     F W +   + S+ VS E++G L ++D 
Sbjct: 1   MVSPENTNWLSDYPLIEGA-------FSDQNPTFPWQI---DGSATVSVEVDGFLCDADV 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           +KEP S+KR++TES   S+SKACREK RRDRLNDKF ELS+ LEPGR  KTDK AI+ DA
Sbjct: 61  IKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           +RMV Q R EAQ LKD N+SL EKIK+LK EKNELRDEK +LK+EKE+++QQLKA  +QP
Sbjct: 121 IRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQP 180

Query: 235 GFMPPAIP-ATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
              P  +P     +Q QAPG+KLVPF  YPG AMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 QPQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226

[Close]

BLAST of CmoCh04G010080 vs. ExPASy Swiss-Prot
Match: Q9LTC7 (Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.8e-37
Identity = 103/196 (52.55%), Postives = 128/196 (65.31%), Query Frame = 0


Query: 96  NASSDVSAEIEGSLLESDGLKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSA 155
           N+SS V A         +  +E  S KR RT S     +KACREKLRR++LNDKF++LS+
Sbjct: 135 NSSSSVGA-------VKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSS 194

Query: 156 TLEPGRALKTDKAAILIDAVRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHR 215
            LEPGR  KTDK+AIL DA+R+V QLRGEA  L+++N  LLE+IK LKA+KNELR+EK  
Sbjct: 195 VLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLV 254

Query: 216 LKLEKEKLEQQLKA-TNSQPGFMPPAIPATFAAQGQAPGNKLVPFIGY-PGVAMWQFMPP 275
           LK EKEK+EQQLK+     PGFMP   PA F +   A      P+  Y P + MW  +PP
Sbjct: 255 LKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFHSHKMAVA---YPYGYYPPNMPMWSPLPP 314

Query: 276 AAVDTSQDHVLRPPVA 290
           A  DTS+D    PPVA
Sbjct: 315 ADRDTSRDLKNLPPVA 320

[Close]

BLAST of CmoCh04G010080 vs. ExPASy Swiss-Prot
Match: Q8L467 (Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-35
Identity = 91/180 (50.56%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 111 ESDGLKEPGSKKRVRTES-SCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAA 170
           E + L +  S+KR RT S S    +KACRE+LRR++LN++F++LS+ LEPGR  KTDK A
Sbjct: 110 EQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPA 169

Query: 171 ILIDAVRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKA 230
           IL DA+R++ QLR EA  L+++N  LLE+IK LKAEKNELR+EK  LK +KEK EQQLK+
Sbjct: 170 ILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKS 229

Query: 231 TNSQPGFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
             +      P IPA F        NK+  +  Y  + MW +MP +  DTS+D  LRPP A
Sbjct: 230 MTAPSSGFIPHIPAAF------NHNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPPAA 283

[Close]

BLAST of CmoCh04G010080 vs. ExPASy Swiss-Prot
Match: Q9LT23 (Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.7e-11
Identity = 63/186 (33.87%), Postives = 90/186 (48.39%), Query Frame = 0


Query: 129 SCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDAVRMVTQLRGEAQVL 188
           S   S KA REKLRR++LN+ F+EL   L+P R  K DKA IL D V+++ +L  E   L
Sbjct: 57  SARKSQKAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKL 116

Query: 189 KDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKL----EQQLKATNSQPGFM------- 248
           K   T+L ++ ++L  EKN+LR+EK  LK + E L    +Q+L++ +     M       
Sbjct: 117 KSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMA 176

Query: 249 -PPAIPATF---AAQGQAP-----------GNKLVPFIGYPGVAMWQFMPPAAVDTSQD- 288
            PP+ P         G  P           GN+    I  P      +MPP  V   Q  
Sbjct: 177 PPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQQSV 236

[Close]

BLAST of CmoCh04G010080 vs. ExPASy TrEMBL
Match: A0A6J1FRH6 (transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111447512 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 4.3e-124
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG
Sbjct: 1   MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP
Sbjct: 121 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235

[Close]

BLAST of CmoCh04G010080 vs. ExPASy TrEMBL
Match: A0A6J1IQF0 (transcription factor ILR3-like OS=Cucurbita maxima OX=3661 GN=LOC111478488 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.0e-122
Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYALIDDIPVPDD NFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG
Sbjct: 1   MVSPETTNWLFDYALIDDIPVPDDANFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLEL ATLEPGRALKTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELGATLEPGRALKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VRMVTQLR EAQ+LKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP
Sbjct: 121 VRMVTQLRSEAQMLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235

[Close]

BLAST of CmoCh04G010080 vs. ExPASy TrEMBL
Match: A0A6J1J7N3 (transcription factor ILR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483303 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 6.2e-107
Identity = 208/235 (88.51%), Postives = 217/235 (92.34%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYAL+DDIPV  D NFSAPTAGFSWSM P NASS+VS EIEGSL ESDG
Sbjct: 1   MVSPETTNWLFDYALMDDIPVA-DANFSAPTAGFSWSMPPLNASSNVSTEIEGSLFESDG 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTE+SCASSSKACREKLRRDRLNDKFLEL A LEPGR  KTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTETSCASSSKACREKLRRDRLNDKFLELGAILEPGRPPKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VR+V QLRGEA++LKDSNTSL EKIK+LKAEKNELRDEK RLK+EKEKLEQQLK  NSQP
Sbjct: 121 VRIVAQLRGEAKMLKDSNTSLSEKIKELKAEKNELRDEKQRLKMEKEKLEQQLKDMNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           GF+PPAIPATFAAQGQA GNKLVPFI YPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFLPPAIPATFAAQGQAAGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 234

[Close]

BLAST of CmoCh04G010080 vs. ExPASy TrEMBL
Match: A0A6J1F1H1 (transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111438485 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 2.0e-105
Identity = 206/235 (87.66%), Postives = 215/235 (91.49%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYAL+DDIPV  D NFSAPTAGFSWSM   NASS+VS EIEGSL ESDG
Sbjct: 1   MVSPETTNWLFDYALMDDIPVA-DANFSAPTAGFSWSMPTLNASSNVSTEIEGSLFESDG 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTE+SCASSSKACREKLRRDRLNDKFLEL A LEPGR  KTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTETSCASSSKACREKLRRDRLNDKFLELGAILEPGRPPKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VR+V QLRGEA++LKDSNTSL EKIK+LKAEKNELRDEK RLK+EKEKLEQQLK  NSQP
Sbjct: 121 VRIVAQLRGEAKMLKDSNTSLSEKIKELKAEKNELRDEKQRLKMEKEKLEQQLKDMNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           GF+PPAIP TFAAQGQA GNKLVPFI YPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFLPPAIPPTFAAQGQAAGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 234

[Close]

BLAST of CmoCh04G010080 vs. ExPASy TrEMBL
Match: A0A6J1DL34 (transcription factor ILR3 OS=Momordica charantia OX=3673 GN=LOC111022098 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 4.4e-105
Identity = 206/235 (87.66%), Postives = 216/235 (91.91%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYAL+DDIPV D  NFS  + GFSWSM   N SS+VSAE EGSLL+SD 
Sbjct: 1   MVSPETTNWLFDYALMDDIPVTDG-NFSGASTGFSWSMPALNGSSNVSAENEGSLLDSDC 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLEL A LEPGR  KTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELGAILEPGRPPKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VR+VTQLRGEAQ+LKDSNTSL EKIK+LKAEKNELRDEK RLK+EKEKLEQQLK+ NSQP
Sbjct: 121 VRIVTQLRGEAQMLKDSNTSLSEKIKELKAEKNELRDEKQRLKMEKEKLEQQLKSMNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           GF+PPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFLPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 234

[Close]

BLAST of CmoCh04G010080 vs. NCBI nr
Match: XP_022942494.1 (transcription factor ILR3-like [Cucurbita moschata])

HSP 1 Score: 454.1 bits (1167), Expect = 8.8e-124
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG
Sbjct: 1   MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP
Sbjct: 121 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235

[Close]

BLAST of CmoCh04G010080 vs. NCBI nr
Match: KAG6600760.1 (Transcription factor ILR3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.0 bits (1164), Expect = 2.0e-123
Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG
Sbjct: 1   MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VRMVTQLRGEAQ+LKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP
Sbjct: 121 VRMVTQLRGEAQMLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235

[Close]

BLAST of CmoCh04G010080 vs. NCBI nr
Match: XP_023539674.1 (transcription factor ILR3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.9 bits (1156), Expect = 1.7e-122
Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYALIDDIPVPDD NFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG
Sbjct: 1   MVSPETTNWLFDYALIDDIPVPDDANFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLEL ATLEPGRALKTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELGATLEPGRALKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VRMVTQLRGEAQ+LKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP
Sbjct: 121 VRMVTQLRGEAQMLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235

[Close]

BLAST of CmoCh04G010080 vs. NCBI nr
Match: XP_022978540.1 (transcription factor ILR3-like [Cucurbita maxima])

HSP 1 Score: 447.6 bits (1150), Expect = 8.2e-122
Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYALIDDIPVPDD NFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG
Sbjct: 1   MVSPETTNWLFDYALIDDIPVPDDANFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLEL ATLEPGRALKTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELGATLEPGRALKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VRMVTQLR EAQ+LKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP
Sbjct: 121 VRMVTQLRSEAQMLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235

[Close]

BLAST of CmoCh04G010080 vs. NCBI nr
Match: KAG7031397.1 (Transcription factor ILR3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 440.7 bits (1132), Expect = 1.0e-119
Identity = 230/234 (98.29%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG
Sbjct: 1   MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA
Sbjct: 61  LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           VRMVTQLRGEAQ+LKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP
Sbjct: 121 VRMVTQLRGEAQMLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 180

Query: 235 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPV 289
           GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDH   PPV
Sbjct: 181 GFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHF--PPV 232

[Close]

BLAST of CmoCh04G010080 vs. TAIR 10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 291.2 bits (744), Expect = 9.2e-79
Identity = 168/240 (70.00%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSM-QPFNASSDVSAEIEGSLLESD 114
           MVSPE  NW+ D  LID     D  +F+    GFSW + QP   SS+ SA ++GS   S+
Sbjct: 1   MVSPENANWICD--LID----ADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSE 60

Query: 115 GLKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILID 174
             KEPGSKKR R ESS A+SSKACREK RRDRLNDKF+EL A LEPG   KTDKAAIL+D
Sbjct: 61  ASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVD 120

Query: 175 AVRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNS- 234
           AVRMVTQLRGEAQ LKDSN+SL +KIK+LK EKNELRDEK RLK EKEKLEQQLKA N+ 
Sbjct: 121 AVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAP 180

Query: 235 QPGFM--PPAIPATFA-AQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
           QP F   PP +P  FA AQGQAPGNK+VP I YPGVAMWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 181 QPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of CmoCh04G010080 vs. TAIR 10
Match: AT1G51070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 262.3 bits (669), Expect = 4.6e-70
Identity = 146/236 (61.86%), Postives = 173/236 (73.31%), Query Frame = 0


Query: 55  MVSPETTNWLFDYALIDDIPVPDDVNFSAPTAGFSWSMQPFNASSDVSAEIEGSLLESDG 114
           MVSPE TNWL DY LI+         FS     F W +   + S+ VS E++G L ++D 
Sbjct: 1   MVSPENTNWLSDYPLIEGA-------FSDQNPTFPWQI---DGSATVSVEVDGFLCDADV 60

Query: 115 LKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAAILIDA 174
           +KEP S+KR++TES   S+SKACREK RRDRLNDKF ELS+ LEPGR  KTDK AI+ DA
Sbjct: 61  IKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDA 120

Query: 175 VRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKATNSQP 234
           +RMV Q R EAQ LKD N+SL EKIK+LK EKNELRDEK +LK+EKE+++QQLKA  +QP
Sbjct: 121 IRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQP 180

Query: 235 GFMPPAIP-ATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
              P  +P     +Q QAPG+KLVPF  YPG AMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 QPQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226

[Close]

BLAST of CmoCh04G010080 vs. TAIR 10
Match: AT1G51070.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 236.5 bits (602), Expect = 2.7e-62
Identity = 127/189 (67.20%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 102 SAEIEGSLLESDGLKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSATLEPGR 161
           S E++G L ++D +KEP S+KR++TES   S+SKACREK RRDRLNDKF ELS+ LEPGR
Sbjct: 104 SVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGR 163

Query: 162 ALKTDKAAILIDAVRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKE 221
             KTDK AI+ DA+RMV Q R EAQ LKD N+SL EKIK+LK EKNELRDEK +LK+EKE
Sbjct: 164 TPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKE 223

Query: 222 KLEQQLKATNSQPGFMPPAIP-ATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQ 281
           +++QQLKA  +QP   P  +P     +Q QAPG+KLVPF  YPG AMWQFMPPAAVDTSQ
Sbjct: 224 RIDQQLKAIKTQPQPQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQ 283

Query: 282 DHVLRPPVA 290
           DHVLRPPVA
Sbjct: 284 DHVLRPPVA 292

[Close]

BLAST of CmoCh04G010080 vs. TAIR 10
Match: AT3G23210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.7e-38
Identity = 103/196 (52.55%), Postives = 128/196 (65.31%), Query Frame = 0


Query: 96  NASSDVSAEIEGSLLESDGLKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELSA 155
           N+SS V A         +  +E  S KR RT S     +KACREKLRR++LNDKF++LS+
Sbjct: 135 NSSSSVGA-------VKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSS 194

Query: 156 TLEPGRALKTDKAAILIDAVRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHR 215
            LEPGR  KTDK+AIL DA+R+V QLRGEA  L+++N  LLE+IK LKA+KNELR+EK  
Sbjct: 195 VLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLV 254

Query: 216 LKLEKEKLEQQLKA-TNSQPGFMPPAIPATFAAQGQAPGNKLVPFIGY-PGVAMWQFMPP 275
           LK EKEK+EQQLK+     PGFMP   PA F +   A      P+  Y P + MW  +PP
Sbjct: 255 LKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFHSHKMAVA---YPYGYYPPNMPMWSPLPP 314

Query: 276 AAVDTSQDHVLRPPVA 290
           A  DTS+D    PPVA
Sbjct: 315 ADRDTSRDLKNLPPVA 320

[Close]

BLAST of CmoCh04G010080 vs. TAIR 10
Match: AT4G14410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-36
Identity = 91/180 (50.56%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 111 ESDGLKEPGSKKRVRTES-SCASSSKACREKLRRDRLNDKFLELSATLEPGRALKTDKAA 170
           E + L +  S+KR RT S S    +KACRE+LRR++LN++F++LS+ LEPGR  KTDK A
Sbjct: 110 EQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPA 169

Query: 171 ILIDAVRMVTQLRGEAQVLKDSNTSLLEKIKDLKAEKNELRDEKHRLKLEKEKLEQQLKA 230
           IL DA+R++ QLR EA  L+++N  LLE+IK LKAEKNELR+EK  LK +KEK EQQLK+
Sbjct: 170 ILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKS 229

Query: 231 TNSQPGFMPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 290
             +      P IPA F        NK+  +  Y  + MW +MP +  DTS+D  LRPP A
Sbjct: 230 MTAPSSGFIPHIPAAF------NHNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPPAA 283

The following BLAST results are available for this feature:

BLAST of CmoCh04G010080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH37	1.3e-77	70.00	Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1	[more]
Q9C682	6.4e-69	61.86	Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=...	[more]
Q9LTC7	3.8e-37	52.55	Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1	[more]
Q8L467	1.6e-35	50.56	Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=...	[more]
Q9LT23	2.7e-11	33.87	Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=...	[more]

BLAST of CmoCh04G010080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRH6	4.3e-124	100.00	transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111447512 PE=...	[more]
A0A6J1IQF0	4.0e-122	98.30	transcription factor ILR3-like OS=Cucurbita maxima OX=3661 GN=LOC111478488 PE=4 ...	[more]
A0A6J1J7N3	6.2e-107	88.51	transcription factor ILR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1F1H1	2.0e-105	87.66	transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111438485 PE=...	[more]
A0A6J1DL34	4.4e-105	87.66	transcription factor ILR3 OS=Momordica charantia OX=3673 GN=LOC111022098 PE=4 SV...	[more]

BLAST of CmoCh04G010080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942494.1	8.8e-124	100.00	transcription factor ILR3-like [Cucurbita moschata]	[more]
KAG6600760.1	2.0e-123	99.57	Transcription factor ILR3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023539674.1	1.7e-122	98.72	transcription factor ILR3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978540.1	8.2e-122	98.30	transcription factor ILR3-like [Cucurbita maxima]	[more]
KAG7031397.1	1.0e-119	98.29	Transcription factor ILR3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh04G010080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54680.1	9.2e-79	70.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.1	4.6e-70	61.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.2	2.7e-62	67.20	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G23210.1	2.7e-38	52.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.1	1.1e-36	50.56	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 185..233
None	No IPR available	PANTHER	PTHR46133:SF1	TRANSCRIPTION FACTOR ILR3	coord: 55..289
None	No IPR available	CDD	cd11446	bHLH_AtILR3_like	coord: 138..210 e-value: 3.44331E-37 score: 125.138
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 136..187 e-value: 3.3E-7 score: 39.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 134..181 e-value: 3.1E-8 score: 33.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 130..181 score: 12.067904
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 133..209 e-value: 2.4E-9 score: 39.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 134..195
IPR044818	Transcription factor ILR3-like	PANTHER	PTHR46133	BHLH TRANSCRIPTION FACTOR	coord: 55..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G010080.1	CmoCh04G010080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity