CmoCh04G009840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G009840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DUF4408 domain-containing protein
Location	Cmo_Chr04: 4978344 .. 4980170 (+)
RNA-Seq Expression	CmoCh04G009840
Synteny	CmoCh04G009840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAACACTCTCCCGCTCCCCAAACGAAAGGAAGCTCTGGCGCACCCACCGCCAAGAATCTCAGGTGAAAGCAAACCAATCGCTAAGCTAAGTTTCTAAACCTCTCACCACAACATCGCCATGCCGATTCTCTCCTCTAACTCCAATTACCAATGGATCCTCTCCCTCAAGATCTTCCTGATCTCCACTGGAGTTTTGTCCATGGCCGTCTTTCTCAAGTTCTCTGTTCCACTGGTGGCTGATTTCCTCGTCTCTGAAATCCCTTCCATCTGGACATGCTTCATCTCCTGGTTAAGACCTCCTTATCTCTACTTGGTTATTAATTGCATAATCATCAGTATTGTTGCCTCTTCTAAGCTCCAGCAGAAGCTGGAGGATGGGGAATCCGTGCTATCCGTTCCGGAGACGCTTTCTCCTCCGCCCCTCGCTAAGATTTCCTCTGAGTCTGACTATGTTGTTTGTGGCGGTACCGATATTTTGAATGGATACTGTTACAACAATGCGAATCAGAACGCCGTCACTAAGATTGCGGACCTTCACATTGACGAATCGAATGGCGTGTACGGACGGATGATGGTAGAACCTGGGGTTTCGGAGATGGAGAAGAAAGGGGAGAATGATTCTTTGATTCTGACAACAGCTGCTGATGAGACTGCTATGTCTAGTCCGATGACGAACGCTCTGCATAGGAAAGATTCCGTCGGACTTTTGTTTTCAAACGAGAAGGAGAAACCGCCGGTTTCTTCAAGAATCGGCCAACGGAAACTCGTGAAAGCCAGTCCTGAAGGTTCGAGCTCTATTTCTTTCTGTCTATCTCTGTTCTTGTGAATTTATGAACACGGATTCTGGTAGCTAGTCATGTGAATCAACTTTAGAGAATGTATAAATTCTAAGATGAGTTTCAGAGTATCGTGCCGGTAAAGATCGCCGGAGCCTATCGTTACACACAGCACAAAATCAGATGGAATTTTTTTTTTTTTTTGGGATAAATTTTTTTGTAAAAGCTGCCAAAAACAGCAAGCCTTTCGGTGGTAGGTCACAGAGCCGACTTTATTTCCCATGCCGTTAAAAGGCTCCAACGGAACTAAGTTTCCATCCCAAATACCGAAACTACCCTTGAAAGGGATTTTATTCTAAAATGGCAAAAGAAGTAATTATAATGAAGGTCATGGGGTTTTGTTTGGCGCGCAGGGAAGCCGTTGGGGGTTTCAAAACCGAAGAGGCAGGACACGCTGGAGAGCACGTGGAGGACAATAACGGAGGGGAGGTCAATGCCGTTAACGAGGCACTTGAGGAAGTCGGACACGTGGGAGTCACAGGGGCGAAGGGCCAACATGGCGGTGGATCCAGCGACGCCGCCTTCGAAGGTGATGACGAAGTCAGAGACGTTCAAGGACCGGAGCAACGTGGGGTCACCGAGTCCGTCGCCGGGGGGGTCGGGGAGGCTGAAGAGAGAACCGTCGCTGACCCAGGAGGAGTTGAACCGGCGAGTTGAGGCGTTCATAAAAAAGTTCAACGATGAGATGAGGTTGCAGAGGCAGGAATCGCTGAAGCAGTACCAGGAGATGGTGGGCAGTAGAGCCAACTAACTAGCTGTGTGTATATATTTTTTTTTTTACTCCAAATTGACCCATTTCCCTTTTTCCCAAATTTTAAATAGGCATATCAGATAAGGAATCAAGGATTAGGGTTTTTATTTTTTATTTTTTCAGTTTAGATTTCTTTTTGACACACCATATGAACTTGGTGTTCCTTCGGGGTGATGTTTATATTAAATATTTATATCTTCTTTTTTTTTCTTTTCCTTTCATTAAAAGTCTTGTGTTG

mRNA sequence

ACGAACACTCTCCCGCTCCCCAAACGAAAGGAAGCTCTGGCGCACCCACCGCCAAGAATCTCAGGTGAAAGCAAACCAATCGCTAAGCTAAGTTTCTAAACCTCTCACCACAACATCGCCATGCCGATTCTCTCCTCTAACTCCAATTACCAATGGATCCTCTCCCTCAAGATCTTCCTGATCTCCACTGGAGTTTTGTCCATGGCCGTCTTTCTCAAGTTCTCTGTTCCACTGGTGGCTGATTTCCTCGTCTCTGAAATCCCTTCCATCTGGACATGCTTCATCTCCTGGTTAAGACCTCCTTATCTCTACTTGGTTATTAATTGCATAATCATCAGTATTGTTGCCTCTTCTAAGCTCCAGCAGAAGCTGGAGGATGGGGAATCCGTGCTATCCGTTCCGGAGACGCTTTCTCCTCCGCCCCTCGCTAAGATTTCCTCTGAGTCTGACTATGTTGTTTGTGGCGGTACCGATATTTTGAATGGATACTGTTACAACAATGCGAATCAGAACGCCGTCACTAAGATTGCGGACCTTCACATTGACGAATCGAATGGCGTGTACGGACGGATGATGGTAGAACCTGGGGTTTCGGAGATGGAGAAGAAAGGGGAGAATGATTCTTTGATTCTGACAACAGCTGCTGATGAGACTGCTATGTCTAGTCCGATGACGAACGCTCTGCATAGGAAAGATTCCGTCGGACTTTTGTTTTCAAACGAGAAGGAGAAACCGCCGGTTTCTTCAAGAATCGGCCAACGGAAACTCGTGAAAGCCAGTCCTGAAGATGAGTTTCAGAGTATCGTGCCGGTCACAGAGCCGACTTTATTTCCCATGCCGTTAAAAGGCTCCAACGGAACTAAGGAAGCCGTTGGGGGTTTCAAAACCGAAGAGGCAGGACACGCTGGAGAGCACGTGGAGGACAATAACGGAGGGGAGGTCAATGCCGTTAACGAGGCACTTGAGGAAGTCGGACACGTGGGAGTCACAGGGGCGAAGGGCCAACATGGCGGTGGATCCAGCGACGCCGCCTTCGAAGGTGATGACGAAGTCAGAGACGTTCAAGGACCGGAGCAACGTGGGGTCACCGAGTCCGTCGCCGGGGGGGTCGGGGAGGCTGAAGAGAGAACCGTCGCTGACCCAGGAGGAGTTGAACCGGCGAGTTGAGGCGTTCATAAAAAAGTTCAACGATGAGATGAGGTTGCAGAGGCAGGAATCGCTGAAGCAGTACCAGGAGATGGTGGGCAGTAGAGCCAACTAACTAGCTGTGTGTATATATTTTTTTTTTTACTCCAAATTGACCCATTTCCCTTTTTCCCAAATTTTAAATAGGCATATCAGATAAGGAATCAAGGATTAGGGTTTTTATTTTTTATTTTTTCAGTTTAGATTTCTTTTTGACACACCATATGAACTTGGTGTTCCTTCGGGGTGATGTTTATATTAAATATTTATATCTTCTTTTTTTTTCTTTTCCTTTCATTAAAAGTCTTGTGTTG

Coding sequence (CDS)

ATGCCGATTCTCTCCTCTAACTCCAATTACCAATGGATCCTCTCCCTCAAGATCTTCCTGATCTCCACTGGAGTTTTGTCCATGGCCGTCTTTCTCAAGTTCTCTGTTCCACTGGTGGCTGATTTCCTCGTCTCTGAAATCCCTTCCATCTGGACATGCTTCATCTCCTGGTTAAGACCTCCTTATCTCTACTTGGTTATTAATTGCATAATCATCAGTATTGTTGCCTCTTCTAAGCTCCAGCAGAAGCTGGAGGATGGGGAATCCGTGCTATCCGTTCCGGAGACGCTTTCTCCTCCGCCCCTCGCTAAGATTTCCTCTGAGTCTGACTATGTTGTTTGTGGCGGTACCGATATTTTGAATGGATACTGTTACAACAATGCGAATCAGAACGCCGTCACTAAGATTGCGGACCTTCACATTGACGAATCGAATGGCGTGTACGGACGGATGATGGTAGAACCTGGGGTTTCGGAGATGGAGAAGAAAGGGGAGAATGATTCTTTGATTCTGACAACAGCTGCTGATGAGACTGCTATGTCTAGTCCGATGACGAACGCTCTGCATAGGAAAGATTCCGTCGGACTTTTGTTTTCAAACGAGAAGGAGAAACCGCCGGTTTCTTCAAGAATCGGCCAACGGAAACTCGTGAAAGCCAGTCCTGAAGATGAGTTTCAGAGTATCGTGCCGGTCACAGAGCCGACTTTATTTCCCATGCCGTTAAAAGGCTCCAACGGAACTAAGGAAGCCGTTGGGGGTTTCAAAACCGAAGAGGCAGGACACGCTGGAGAGCACGTGGAGGACAATAACGGAGGGGAGGTCAATGCCGTTAACGAGGCACTTGAGGAAGTCGGACACGTGGGAGTCACAGGGGCGAAGGGCCAACATGGCGGTGGATCCAGCGACGCCGCCTTCGAAGGTGATGACGAAGTCAGAGACGTTCAAGGACCGGAGCAACGTGGGGTCACCGAGTCCGTCGCCGGGGGGGTCGGGGAGGCTGAAGAGAGAACCGTCGCTGACCCAGGAGGAGTTGAACCGGCGAGTTGA

Protein sequence

MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDILNGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAMSSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPEDEFQSIVPVTEPTLFPMPLKGSNGTKEAVGGFKTEEAGHAGEHVEDNNGGEVNAVNEALEEVGHVGVTGAKGQHGGGSSDAAFEGDDEVRDVQGPEQRGVTESVAGGVGEAEERTVADPGGVEPAS

Homology

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BLAST of CmoCh04G009840 vs. ExPASy TrEMBL
Match: A0A6J1FQE8 (uncharacterized protein LOC111447514 OS=Cucurbita moschata OX=3662 GN=LOC111447514 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 7.9e-117
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP
Sbjct: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL
Sbjct: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180
           NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM
Sbjct: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180

Query: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE
Sbjct: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 222

[Close]

BLAST of CmoCh04G009840 vs. ExPASy TrEMBL
Match: A0A6J1ITI6 (uncharacterized protein LOC111478509 OS=Cucurbita maxima OX=3661 GN=LOC111478509 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 4.4e-107
Identity = 209/222 (94.14%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSNSNYQWILSLKIFLISTGVLSMAVFLK SVPLVADFLVSEIPSIWTCFISWLRP
Sbjct: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYLV+NCIIISIVASSKLQQKLEDGES LSVPETLSPPPLAKISSESDYVVCGGTDIL
Sbjct: 61  PYLYLVVNCIIISIVASSKLQQKLEDGESGLSVPETLSPPPLAKISSESDYVVCGGTDIL 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180
           NGYCYNNANQNAVTKIADL IDESNGVYGRM        MEKKGENDSLILTTAADETAM
Sbjct: 121 NGYCYNNANQNAVTKIADLQIDESNGVYGRM--------MEKKGENDSLILTTAADETAM 180

Query: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           SSPMTN LHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE
Sbjct: 181 SSPMTNTLHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 214

[Close]

BLAST of CmoCh04G009840 vs. ExPASy TrEMBL
Match: A0A6J1ETQ9 (uncharacterized protein LOC111435872 OS=Cucurbita moschata OX=3662 GN=LOC111435872 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 166/222 (74.77%), Postives = 190/222 (85.59%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           M ILSSNS+YQWILSLKI L+STGVLSMAVFLK SVP+V+DF+VSEIPSIWTCF+SWL P
Sbjct: 1   MSILSSNSSYQWILSLKILLVSTGVLSMAVFLKLSVPVVSDFIVSEIPSIWTCFLSWLTP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYL+INCIIISIVASSK Q KLED  SV  +P+T++P P+AKISS   Y VCGG++I 
Sbjct: 61  PYLYLLINCIIISIVASSKFQPKLEDDASVPPIPQTIAPFPVAKISSA--YAVCGGSEIF 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180
           NGYCY NA  N  T ++DL I+ESNGVYGRM VE  VSEMEKKGENDSLI   A+DE+ +
Sbjct: 121 NGYCY-NAIPNVATNVSDLQIEESNGVYGRMKVESRVSEMEKKGENDSLI--KASDESGV 180

Query: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           SSPMTN+L RKDS+GL+FSNE E+PPVSSRIGQRKLVKASPE
Sbjct: 181 SSPMTNSLQRKDSIGLMFSNENERPPVSSRIGQRKLVKASPE 217

[Close]

BLAST of CmoCh04G009840 vs. ExPASy TrEMBL
Match: A0A6J1JCS1 (uncharacterized protein LOC111483295 OS=Cucurbita maxima OX=3661 GN=LOC111483295 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 7.0e-81
Identity = 165/222 (74.32%), Postives = 187/222 (84.23%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           M ILSSNS+YQWILSLKI L+STGVLSMAVFLK SVP+V+DF+VSEIPSIWTCF+SWL P
Sbjct: 1   MSILSSNSSYQWILSLKILLVSTGVLSMAVFLKLSVPVVSDFIVSEIPSIWTCFLSWLTP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYL+INCIIISIVASSK Q KLED  SV  +P T++P P+AKISS   Y VCGG++I 
Sbjct: 61  PYLYLLINCIIISIVASSKFQPKLEDDASVPPIPHTIAPFPVAKISSA--YAVCGGSEIF 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180
           NGY Y NA  N  T ++DL I+ESNGVYGRM VE  VSEMEKKGENDSLI   A+DE+ +
Sbjct: 121 NGYSY-NAIPNVATNVSDLQIEESNGVYGRMNVESRVSEMEKKGENDSLI--KASDESGV 180

Query: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           SSPMTNAL RKDS+GL+FSNE E+PPVSSRIGQRK VKASPE
Sbjct: 181 SSPMTNALQRKDSIGLIFSNENERPPVSSRIGQRKFVKASPE 217

[Close]

BLAST of CmoCh04G009840 vs. ExPASy TrEMBL
Match: A0A6J1CP28 (uncharacterized protein LOC111012867 OS=Momordica charantia OX=3673 GN=LOC111012867 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 4.5e-80
Identity = 170/224 (75.89%), Postives = 188/224 (83.93%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILS +SNYQWILSLKI LISTGVLSMAVFLK S+PL+ DFL+SEIP+IWTCF+SWLRP
Sbjct: 1   MPILSPSSNYQWILSLKIILISTGVLSMAVFLKLSLPLLTDFLLSEIPTIWTCFVSWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYL+INCIIISI+ASSKLQQKL DG+       + +PPP+AKIS  SDYVV  G DI 
Sbjct: 61  PYLYLIINCIIISILASSKLQQKL-DGDG------SPAPPPVAKIS--SDYVVYSGGDIS 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVE--PGVSEMEKKGENDSLILTTAADET 180
           NGY Y +ANQN VTKI+DL IDESNGVYGRM VE  P VSE++ KGEND LI+  AADE 
Sbjct: 121 NGYSY-SANQNVVTKISDLRIDESNGVYGRMSVEPQPRVSEIQMKGENDGLIVMKAADEA 180

Query: 181 AMSSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           A   P+TNALHRKDSVGLLFSNEKEKPPVSSRIGQRK VKASPE
Sbjct: 181 ATPRPITNALHRKDSVGLLFSNEKEKPPVSSRIGQRKSVKASPE 214

[Close]

BLAST of CmoCh04G009840 vs. NCBI nr
Match: XP_022942497.1 (uncharacterized protein LOC111447514 [Cucurbita moschata])

HSP 1 Score: 430.3 bits (1105), Expect = 1.6e-116
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP
Sbjct: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL
Sbjct: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180
           NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM
Sbjct: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180

Query: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE
Sbjct: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 222

[Close]

BLAST of CmoCh04G009840 vs. NCBI nr
Match: XP_023537565.1 (uncharacterized protein LOC111798557 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.7 bits (1088), Expect = 1.5e-114
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSNSNYQWILSLKIFLISTGVLSMAVFLK SVPLVADFLVSEIPSIWTCFISWLRP
Sbjct: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETL+PPPLAKISSESDYVVCGGTDIL
Sbjct: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLAPPPLAKISSESDYVVCGGTDIL 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180
           NGYCYNNANQNAVTKIADL IDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM
Sbjct: 121 NGYCYNNANQNAVTKIADLQIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180

Query: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE
Sbjct: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 222

[Close]

BLAST of CmoCh04G009840 vs. NCBI nr
Match: KAG7031380.1 (hypothetical protein SDJN02_05420 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 423.3 bits (1087), Expect = 2.0e-114
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSNSNYQWILSLKIFLISTGVLSMAVFLK SVPLVADFLVSEIPSIWTCFISWLRP
Sbjct: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL
Sbjct: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180
           NGYCYNNANQNAVTKIADL IDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETA+
Sbjct: 121 NGYCYNNANQNAVTKIADLQIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAI 180

Query: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE
Sbjct: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 222

[Close]

BLAST of CmoCh04G009840 vs. NCBI nr
Match: KAG6600739.1 (hypothetical protein SDJN03_05972, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 419.5 bits (1077), Expect = 2.9e-113
Identity = 218/222 (98.20%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSNSNYQWILSLKIFLISTGVLSMAVFLK SVPLVADFLVSEIPSIWTCFISWLRP
Sbjct: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL
Sbjct: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180
           NGYCYNNANQNAVTKIADL IDESNGVYGRMMVE GVSEMEKKGENDSLILTTAADETA+
Sbjct: 121 NGYCYNNANQNAVTKIADLQIDESNGVYGRMMVELGVSEMEKKGENDSLILTTAADETAI 180

Query: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE
Sbjct: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 222

[Close]

BLAST of CmoCh04G009840 vs. NCBI nr
Match: XP_022978573.1 (uncharacterized protein LOC111478509 [Cucurbita maxima])

HSP 1 Score: 397.9 bits (1021), Expect = 9.0e-107
Identity = 209/222 (94.14%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSNSNYQWILSLKIFLISTGVLSMAVFLK SVPLVADFLVSEIPSIWTCFISWLRP
Sbjct: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDIL 120
           PYLYLV+NCIIISIVASSKLQQKLEDGES LSVPETLSPPPLAKISSESDYVVCGGTDIL
Sbjct: 61  PYLYLVVNCIIISIVASSKLQQKLEDGESGLSVPETLSPPPLAKISSESDYVVCGGTDIL 120

Query: 121 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 180
           NGYCYNNANQNAVTKIADL IDESNGVYGRM        MEKKGENDSLILTTAADETAM
Sbjct: 121 NGYCYNNANQNAVTKIADLQIDESNGVYGRM--------MEKKGENDSLILTTAADETAM 180

Query: 181 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 223
           SSPMTN LHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE
Sbjct: 181 SSPMTNTLHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE 214

[Close]

BLAST of CmoCh04G009840 vs. TAIR 10
Match: AT1G11220.1 (Protein of unknown function (DUF761) )

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-16
Identity = 71/220 (32.27%), Postives = 109/220 (49.55%), Query Frame = 0


Query: 13  ILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCIII 72
           ++S+K  LI+ G++++++FLK SVP+  DF VS  P  W+ F+SWL+PPYL++ IN II 
Sbjct: 5   MISIKAALITAGIVAVSLFLKSSVPIAVDFSVSRFPIFWSSFLSWLKPPYLFVAINVIIT 64

Query: 73  SIVASSKLQQKL-----EDGESVL----SVPETLSPPP---LAKISSESDYVVCGGTDIL 132
            I+ASSK  Q +     ED E +L    ++P  ++  P   L  + ++ D+V    + IL
Sbjct: 65  IIMASSKFYQSVGEQDGEDDEILLGGEYTIPNVITQAPPRRLVDLDADFDFVATVQSPIL 124

Query: 133 NGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEKKGENDSLILTTAADETAM 192
                      A  +I ++  +E               EM   G+      T   DE A+
Sbjct: 125 ----------VAEVEILEVVFEE--------------KEMAISGQ------TNGGDEFAV 184

Query: 193 SSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKAS 221
                N    ++S  L      EKP VS+R G RK +KAS
Sbjct: 185 MRSELNQPIMEESENL---PPAEKPLVSARSGHRKPIKAS 191

[Close]

BLAST of CmoCh04G009840 vs. TAIR 10
Match: AT1G61260.1 (Protein of unknown function (DUF761) )

HSP 1 Score: 79.7 bits (195), Expect = 5.1e-15
Identity = 69/231 (29.87%), Postives = 109/231 (47.19%), Query Frame = 0


Query: 12  WILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCII 71
           W+++ K  LIS+GV ++A+ LK SVP+  DF VS  P +W+  +SWL+PPYLY+V N II
Sbjct: 4   WMMTTKAVLISSGVATVALLLKLSVPVAVDFSVSRAPILWSSLLSWLKPPYLYVVTNGII 63

Query: 72  ISIVASSKLQQKLEDGESVLSVPETLSPPPLAKISSESDYVVCGGTDILNGYCYNNANQN 131
           I+IVASSK  +   D +    +           +     Y +     I+N     +    
Sbjct: 64  ITIVASSKYYRSHHDRDEEDEI----------VVYGGGGYKIQTEEPIVN----QHQASP 123

Query: 132 AVTKIADLHIDESNG-VYGRMMVEPGVSE------MEKKGENDSLILTTAADETAMSSPM 191
            + ++ DL      G V   +  E   SE       + + E   +I + A  E  +   +
Sbjct: 124 RILEVKDLDTGAHFGFVVANLEAEELESEAVTAVVFDDEEEEKKIIDSAATAEDEIEEEL 183

Query: 192 TNALHRKDS---------VGLLFSNEK----EKPPVSSRIGQRKLVKASPE 223
            + +  ++S           ++  +E     EKP V+SR G RKL+KAS E
Sbjct: 184 KSVIMVENSDLVESDVIPPPMMIESENLPPIEKPLVTSRFGHRKLMKASQE 220

[Close]

BLAST of CmoCh04G009840 vs. TAIR 10
Match: AT5G54300.1 (Protein of unknown function (DUF761) )

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-09
Identity = 72/242 (29.75%), Postives = 114/242 (47.11%), Query Frame = 0


Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRP 60
           MP+L   S+++   ++ I     GV S+A  +  +VP V+ F+VS  P I+   +  L+P
Sbjct: 1   MPLLLPTSSFKTTATVVI----AGVSSIATAMILTVPSVSHFVVSCFPIIYDNTVFLLKP 60

Query: 61  PYLYLVINCIIISIVASSKLQQK---LEDGESVLSVPETLSPPPL---AKISSESDYVVC 120
           PYLYLVIN II+ I+A+SKL  K   ++D E    + E ++P P+     + S+ D    
Sbjct: 61  PYLYLVINSIIVCIIATSKLTHKSSSVDDSE----ISEVVTPIPIPVPVHLPSDIDSGYL 120

Query: 121 GGTDILNGYCYNNANQNAVTKIADLHIDESNGVYGRMMVEPGVSEMEK-KGENDSLILTT 180
               +++ Y         V KI D+ I   N     +   P V E EK K  +DS    T
Sbjct: 121 NVVHVVSDY------TGFVEKIDDVSI---NPTVEAIRKFPEVQEAEKSKESSDSPEPET 180

Query: 181 AADETAMSSPMTNALHRKDSVGLLFSNEKEKPPVSSRIGQRKLVKASPE-DEFQSIVPVT 235
              +    SP  + L           +   KPP   R  Q+K +K++ E    ++ + VT
Sbjct: 181 EKPKLKNDSPEISIL----------KHSTRKPP---RFNQQKSLKSNSEGGNKKTALGVT 212

[Close]

BLAST of CmoCh04G009840 vs. TAIR 10
Match: AT1G11210.1 (Protein of unknown function (DUF761) )

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-07
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 16 LKIFLISTGVLSMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCIIISIV 75
          +K  LISTGV++ A+ LK  VP+  DF  S+ P I + F++WL+PPYLY++ N III + 
Sbjct: 5  MKAVLISTGVVATAMHLKVIVPVAMDF--SQNPIILSSFLTWLKPPYLYVITNVIIIVVG 64

Query: 76 ASSKL 81
           S ++
Sbjct: 65 VSYRI 67

[Close]

BLAST of CmoCh04G009840 vs. TAIR 10
Match: AT1G11230.1 (Protein of unknown function (DUF761) )

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-07
Identity = 28/72 (38.89%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 16 LKIFLISTGVL-SMAVFLKFSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCIIISI 75
          +K  LISTG++ +M++FLK  +P+   F +S   ++W+ F+ WL+PPYL++ +N +I  I
Sbjct: 7  IKAVLISTGIITAMSMFLKVFLPVTLYFSLS-FSTLWSSFLPWLKPPYLFVFVNVMITII 66

Query: 76 VASSKLQQKLED 87
          +ASS+  + + D
Sbjct: 67 IASSRYYRSIGD 77

The following BLAST results are available for this feature:

BLAST of CmoCh04G009840 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G009840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQE8	7.9e-117	100.00	uncharacterized protein LOC111447514 OS=Cucurbita moschata OX=3662 GN=LOC1114475...	[more]
A0A6J1ITI6	4.4e-107	94.14	uncharacterized protein LOC111478509 OS=Cucurbita maxima OX=3661 GN=LOC111478509...	[more]
A0A6J1ETQ9	1.7e-82	74.77	uncharacterized protein LOC111435872 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A6J1JCS1	7.0e-81	74.32	uncharacterized protein LOC111483295 OS=Cucurbita maxima OX=3661 GN=LOC111483295...	[more]
A0A6J1CP28	4.5e-80	75.89	uncharacterized protein LOC111012867 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of CmoCh04G009840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942497.1	1.6e-116	100.00	uncharacterized protein LOC111447514 [Cucurbita moschata]	[more]
XP_023537565.1	1.5e-114	98.65	uncharacterized protein LOC111798557 [Cucurbita pepo subsp. pepo]	[more]
KAG7031380.1	2.0e-114	98.65	hypothetical protein SDJN02_05420 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600739.1	2.9e-113	98.20	hypothetical protein SDJN03_05972, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022978573.1	9.0e-107	94.14	uncharacterized protein LOC111478509 [Cucurbita maxima]	[more]

BLAST of CmoCh04G009840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11220.1	2.1e-16	32.27	Protein of unknown function (DUF761)	[more]
AT1G61260.1	5.1e-15	29.87	Protein of unknown function (DUF761)	[more]
AT5G54300.1	1.4e-09	29.75	Protein of unknown function (DUF761)	[more]
AT1G11210.1	1.3e-07	46.15	Protein of unknown function (DUF761)	[more]
AT1G11230.1	2.3e-07	38.89	Protein of unknown function (DUF761)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025520	Domain of unknown function DUF4408	PFAM	PF14364	DUF4408	coord: 48..80 e-value: 9.8E-15 score: 54.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..317
None	No IPR available	PANTHER	PTHR33098	COTTON FIBER (DUF761)	coord: 8..224
None	No IPR available	PANTHER	PTHR33098:SF65	COTTON FIBER EXPRESSED PROTEIN 1-LIKE PROTEIN	coord: 8..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G009840.1	CmoCh04G009840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane