CmoCh04G009720 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G009720
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Description3-deoxy-manno-octulosonate cytidylyltransferase
LocationCmo_Chr04: 4942225 .. 4945321 (+)
RNA-Seq ExpressionCmoCh04G009720
SyntenyCmoCh04G009720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGTTGGATCAGTTCTCGTAGGTTGAACTTTCAACTCTTGTATTTATTTCCATAGAATGTTGTATTTGATGGAATTTGATTTGCATTGGCTGGTGGGCTGTTGTAGATTTGTACTTTGTATGATTTAACTGACATCATAGATCATTCGGATCTTAGTTTATCTTTCTAAAGAGCTAATAGTCATTAAATCAACATTTTTCTGGTGTTAGATGTTGATTTACTTTGCAGTACGAGTGATGAAGCCTACGACATTGGCTTATGTTTTTATATTGTTCATGTTTTGAATCTGCCAAAATTTTAATATGCCTATGAAATTCATATTCTACAGAGAACTTGGGAAAGGGCAAAAATGGCTACTACATTGGATTGTGTTGGTAAGCATGTGTGCTTTGTTCTTCTTGCTTTATGCGTACCTCATCCTTACCTTTCGATTTGAAATCTTTCCAGTTGTAGCAACCGACGATGCAAAGATTGCACAATGCTGTAAAGGATTTGGTGCTGATGTTGTAATGACATCAGAGTCTTGCCGGAATGGTAAGCACTGTGATTATTATATAACAATCTCGAGATTAGTATTGAAGTCTTATTATTTTCAGTATGAAACTACTTTAGGAACTGAACGTTGTAATGAAGCACTTCAGAAGCTGGAGAAGAAATACGATATCGTTGTAAATATTCAAGGAGATGAGCCGCTTATCGAACCGGAGATCATCGATGGCATTGTTAAAGCTCTACAGGTGAAAGTTTTCGTACCTTTTTGGTTAAAATGGCAGGATTGAAAGTTTGATGTTGCATTAAAAGACTCCATACTAATAAATGGACAGTTATGAACTTGCTCCCCTCAAGCTCTTGTTCTGTATGGTGTGCAGGCTGCCCCGGATGCAGTGTTCAGCACTGCAGTGACATCCTTAAAACCTGAAGATGCATTCGACCCCAATCGCGTGAAGTGTGTAGTGGATAATCATGGATACGCTATTTATTTTTCAAGAGGATTGATCCCTTTCAACAAGTAAGATTTCCTTTTCCATCTTGGGTTTCCCTTGTGTTATTTGATTGTTCCAGTTCGAGGTCAGGTTGCAGCGTCCATTATAGATAGGTTCGAGTTGTCGGGAAATTTAACGAGTTACATCAATTCATTGATGCAGGTCAGGAAAGGTCAACCTTCAATATCCTTATTTGCTTCATCTTGGAATCCAGGTATTAATGGATTGTATACGAGATGAATTCATTTTGCTGTAATGCCAGACTGAAGGAACATTCCTTTTTCTTCTATTTTCCTTTCCAGAGTTTTGATTCGAAATTTTTAAGTATATATCCTGAACTCCAATCAACACCATTGCAACTAGAGGAGGATTTAGAACAGCTAAAAGTGTTAGAACATGGCTACAAAATGAAGGTACACCTCAACTTCTTATGTACATAGCATCTTTTCCCACTTTTGGGAAATTTGTATACTTTATAAAACCAGGCATTTTTGTTCTTCTGTTTAGAATAACTTTTGAAATGGAATCATTTTTTAATATAGTTAACCAAACAAATTTGTTATTTAAAGCATTTTTTTAAAGAACAAATGTAAGATATGGAAACTTTTTTATCAAAAGTATTTCTTCAAAAAAGTGTTTAAACTTACACTTAGATGGAGACGAGCGTACGCATAAAGATAATCGATCCAAGTTTCATATCTTGTCTGGGAAAGAAGTTGTGTGTTTTCACTTGTGAAAAGGTATGGTGCTCCAATGTTGAAACTGTCATTTTGTTTTGCAGGTGATTAAGGTCGACCACGAGGCGCACGGTGTTGATGTTCCTGGAGATGTAGAAAAGATAGAATCTTTTATGAAGGAAAGGAACCTTTCTTAATGAAGATTAACCAAAGAAAGCTATACTTTCGAATTGAATTTCGTTTTCGTTATTAGTAGTTGTAATTGGTATCGGGTTGAACAAATATGCTGTTATTTTGTGGTGTTGAAGTACTTTGTTTTTTCAGAACTATATCTTTTAGCTCTTCGTTTCTGATACTTGTGACATATTGATTTATTTGTATAGTTATTGAAGTAAATTTGTTGATTAATGAGTTAGCTTAGGTTCATTTTAATTTGTTGTGTTAAATTATGATACTTGGAGTTGGAACCCAGGTGCCTATTCTATTCTTTTTACATTAAACATGGAGATTCAGATGCCCATTGTTAAGACAGCTCACTGAACGCATGTGAGCTGAGCTCATTTGGGCAACTTCGACTGCAATATGCTATCATTGTTTAGACAAAGAATATGGAGATGCACAAGCAAGTTCAAGTAATCAAGGAGGAAACACACAGGAGTTCAAACGCTTTGAGACTATGACAAATTCTAGCTGGTTAGCTGACAAGGATATTAGTTGCCACGATAATGCTTGTCTAAGATGGCTTGTGGCTACATGTTGGATATCTTGGTCATGCTTGTCTTAGGACGGGTTGTCCATGATCGTAGTTATGCTTGTCTAGGATATTTTGTAGGTCGCATGTCGGATGTCTCGGTCATGTTTGTTTAAGACGTATTGTCCATGAATCTATGCCTGTTCCAAATTTCTTTTACTTGCTTTCATGTTAGATAAAACTTTACTACTTGTTGAGTTAATACGGGATGTATGATCGGTCACCAAAATCATGTCTAACACCTATCAGAGCTAAAATGCCCCGAAGTGAGAAACGTGATTAATTATCAATTCTTACTCTCTCAATTATATGCCATGAAAGTTATTGTTCTTACGTTATGTGACATGAACTATGATCGTTATTGTTCTTAGGTTCTTTGACATGAGCTATGGAAGTTATTGTTCTTAACTTCTTTGACATGAGGTATGAAAGTTATTGTTGTTAGCTGTTTGAGTTGGTAGAACATTGTGTTCCATTTCCAACATAAATAATTTAGAAATGCCACCGTCATCCACGCGTTACATTTCTATTCGTCTGTATTTAGACCTGCATCAACGTCACGTCAATTTCTCACCCTTCCGGACTTCTTTCAGTGCCACGTCAATCCAAAAACTCAACTACAAATTTTGCCCAAGACCTTCACTCTTTCTCGCCTCGCACTCACAACCACCGTTCTCTCTAA

mRNA sequence

ATGTCGGTTGGATCAGTTCTCGTAGTTGTAGCAACCGACGATGCAAAGATTGCACAATGCTGTAAAGGATTTGGTGCTGATGTTGTAATGACATCAGAGTCTTGCCGGAATGGAACTGAACGTTGTAATGAAGCACTTCAGAAGCTGGAGAAGAAATACGATATCGTTGTAAATATTCAAGGAGATGAGCCGCTTATCGAACCGGAGATCATCGATGGCATTGTTAAAGCTCTACAGGCTGCCCCGGATGCAGTGTTCAGCACTGCAGTGACATCCTTAAAACCTGAAGATGCATTCGACCCCAATCGCGTGAAGTCAGGAAAGGTCAACCTTCAATATCCTTATTTGCTTCATCTTGGAATCCAGAGTTTTGATTCGAAATTTTTAAGTATATATCCTGAACTCCAATCAACACCATTGCAACTAGAGGAGGATTTAGAACAGCTAAAAGTGTTAGAACATGGCTACAAAATGAAGGTGATTAAGGTCGACCACGAGGCGCACGGTGTTGATGTTCCTGGAGATACCTGCATCAACGTCACGTCAATTTCTCACCCTTCCGGACTTCTTTCAGTGCCACGTCAATCCAAAAACTCAACTACAAATTTTGCCCAAGACCTTCACTCTTTCTCGCCTCGCACTCACAACCACCGTTCTCTCTAA

Coding sequence (CDS)

ATGTCGGTTGGATCAGTTCTCGTAGTTGTAGCAACCGACGATGCAAAGATTGCACAATGCTGTAAAGGATTTGGTGCTGATGTTGTAATGACATCAGAGTCTTGCCGGAATGGAACTGAACGTTGTAATGAAGCACTTCAGAAGCTGGAGAAGAAATACGATATCGTTGTAAATATTCAAGGAGATGAGCCGCTTATCGAACCGGAGATCATCGATGGCATTGTTAAAGCTCTACAGGCTGCCCCGGATGCAGTGTTCAGCACTGCAGTGACATCCTTAAAACCTGAAGATGCATTCGACCCCAATCGCGTGAAGTCAGGAAAGGTCAACCTTCAATATCCTTATTTGCTTCATCTTGGAATCCAGAGTTTTGATTCGAAATTTTTAAGTATATATCCTGAACTCCAATCAACACCATTGCAACTAGAGGAGGATTTAGAACAGCTAAAAGTGTTAGAACATGGCTACAAAATGAAGGTGATTAAGGTCGACCACGAGGCGCACGGTGTTGATGTTCCTGGAGATACCTGCATCAACGTCACGTCAATTTCTCACCCTTCCGGACTTCTTTCAGTGCCACGTCAATCCAAAAACTCAACTACAAATTTTGCCCAAGACCTTCACTCTTTCTCGCCTCGCACTCACAACCACCGTTCTCTCTAA

Protein sequence

MSVGSVLVVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPGDTCINVTSISHPSGLLSVPRQSKNSTTNFAQDLHSFSPRTHNHRSL
Homology
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BLAST of CmoCh04G009720 vs. ExPASy Swiss-Prot
Match: Q9C920 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KDSB PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-75
Identity = 143/189 (75.66%), Postives = 155/189 (82.01%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           +VVATDD +IA+CC+GFGADV+MTSESCRNGTERCNEAL+KLEKKYD+VVNIQGDEPLIE
Sbjct: 88  IVVATDDERIAECCRGFGADVIMTSESCRNGTERCNEALEKLEKKYDVVVNIQGDEPLIE 147

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDG+VKALQ  PDAVFSTAVTSLKPED  DPNRV                     KS
Sbjct: 148 PEIIDGVVKALQVTPDAVFSTAVTSLKPEDGLDPNRVKCVVDNRGYAIYFSRGLIPYNKS 207

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN  +PY+LHLGIQSFDSKFL +Y ELQ TPLQ EEDLEQLKVLE+GYKMKVIKVDHE
Sbjct: 208 GKVNPDFPYMLHLGIQSFDSKFLKVYSELQPTPLQQEEDLEQLKVLENGYKMKVIKVDHE 267

[Close]
BLAST of CmoCh04G009720 vs. ExPASy Swiss-Prot
Match: Q9M4G3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Zea mays OX=4577 GN=KDSB PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.4e-70
Identity = 136/189 (71.96%), Postives = 151/189 (79.89%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDD +IA+CC+GFGADV+MTS SC+NG+ERC EAL+KL+K YDIVVNIQGDEPLIE
Sbjct: 96  VVVATDDERIAECCRGFGADVIMTSASCKNGSERCCEALKKLDKHYDIVVNIQGDEPLIE 155

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDG+V +LQ APDAVFSTAVTSLKPEDAFD NRV                     KS
Sbjct: 156 PEIIDGVVMSLQRAPDAVFSTAVTSLKPEDAFDTNRVKCVVDNLGYAIYFSRGLIPFNKS 215

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           G  N +YPYLLHLGI  FDSKFL IYPEL  TPLQ+EEDLEQLKVLE+GY+MKVIKVDH+
Sbjct: 216 GNANPKYPYLLHLGIAGFDSKFLKIYPELPPTPLQMEEDLEQLKVLENGYRMKVIKVDHD 275

[Close]
BLAST of CmoCh04G009720 vs. ExPASy Swiss-Prot
Match: Q6MD00 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=kdsB PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.4e-25
Identity = 79/192 (41.15%), Postives = 98/192 (51.04%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPL 67
           ++VATDD +I +  + F   VVMTSE C  GT+R  E L    +      +VNIQGDEP 
Sbjct: 53  LIVATDDERIFEHVRSFNGKVVMTSEQCPTGTDRLAEVLSLYPEWMHATAIVNIQGDEPC 112

Query: 68  IEPEIIDGIVKALQAAPDAVFSTAVTSLKPEDA-------------------FDPNRVKS 127
           + P  I+  V+AL   P    ST VT L  E+                    F    + S
Sbjct: 113 LNPLTINLAVQALVNDPQGQVSTIVTPLLDEEEAKNSSIVKCVMDQQGNALYFSRALIPS 172

Query: 128 GKVNL---QYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKV 176
            K N       Y  HLG+  +   F+  Y +L STPLQLEEDLEQLKVLEHGY++KV  V
Sbjct: 173 NKTNSFKNGAIYFRHLGLYVYRPSFIINYQKLPSTPLQLEEDLEQLKVLEHGYRIKVAIV 232

[Close]
BLAST of CmoCh04G009720 vs. ExPASy Swiss-Prot
Match: Q9Z8U9 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia pneumoniae OX=83558 GN=kdsB PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.8e-24
Identity = 72/186 (38.71%), Postives = 100/186 (53.76%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           +VVATDD  I      FG   VMTS +C NGTER  E  +K   K +I+VNIQGDEP + 
Sbjct: 53  IVVATDDQHIIDHVTDFGGYAVMTSPTCSNGTERTGEVARKYFPKAEIIVNIQGDEPCLN 112

Query: 68  PEIIDGIVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVK-----SGK------------V 127
            E++D +V+ L+++P+A   T V  +   E+     +VK      G+            +
Sbjct: 113 SEVVDALVQKLRSSPEAELVTPVALTTDREEILTEKKVKCVFDSEGRALYFSRSPIPFIL 172

Query: 128 NLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHEAHG 176
               P  LH+G+ +F  + L  Y +  STPL   EDLEQL+ LEHG K+ V  VD ++  
Sbjct: 173 KKATPVYLHIGVYAFKREALFRYLQHSSTPLSDAEDLEQLRFLEHGGKIHVCIVDAKSPS 232

[Close]
BLAST of CmoCh04G009720 vs. ExPASy Swiss-Prot
Match: A6L9D4 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=kdsB PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-23
Identity = 72/197 (36.55%), Postives = 103/197 (52.28%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           V VATDD +I    K FG  VVMTS+  R+GT+RC EA QK+ + YD++VNIQGDEP I 
Sbjct: 45  VCVATDDIRIENAVKAFGGQVVMTSDQHRSGTDRCYEAYQKIGEGYDVIVNIQGDEPFIH 104

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPED-----AFDPNRVK----------------- 127
           PE I   +K   A  +   +T V   + +D      F+PN  K                 
Sbjct: 105 PEQIQ-TIKTCFADANTQIATLVKPFRSDDDFESSLFNPNSPKVVLNKNNEAMYFSRSII 164

Query: 128 ---SGKVNLQ----YPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKM 176
               GK   +    + +  H+G+ ++ ++ L    +L  + L+L E LEQL+ LE+GYK+
Sbjct: 165 PYIRGKKYTEWLPSHTFYKHIGLYAYRAQVLKEITQLPQSALELAESLEQLRWLENGYKI 224

[Close]
BLAST of CmoCh04G009720 vs. ExPASy TrEMBL
Match: A0A0A0L2M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104930 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.0e-85
Identity = 163/168 (97.02%), Postives = 167/168 (99.40%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDA+IAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 95  VVVATDDARIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 154

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSK 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSK
Sbjct: 155 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSK 214

Query: 128 FLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPGD 176
           FLS+YPEL+STPLQLEEDLEQLKVLEHGYKMKVIKV+HEAHGVDVP D
Sbjct: 215 FLSMYPELESTPLQLEEDLEQLKVLEHGYKMKVIKVEHEAHGVDVPED 262

[Close]
BLAST of CmoCh04G009720 vs. ExPASy TrEMBL
Match: A0A6J1FNY1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111446920 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.9e-84
Identity = 168/189 (88.89%), Postives = 168/189 (88.89%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 96  VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 155

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 156 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPFNKS 215

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 216 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 275

[Close]
BLAST of CmoCh04G009720 vs. ExPASy TrEMBL
Match: A0A6J1IKE7 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111477882 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.1e-83
Identity = 167/189 (88.36%), Postives = 167/189 (88.36%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 96  VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 155

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLK EDAFDPNRV                     KS
Sbjct: 156 PEIIDGIVKALQAAPDAVFSTAVTSLKHEDAFDPNRVKCVVDNHGYAIYFSRGLIPFNKS 215

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 216 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 275

[Close]
BLAST of CmoCh04G009720 vs. ExPASy TrEMBL
Match: A0A6J1JB04 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111483358 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.9e-81
Identity = 162/189 (85.71%), Postives = 165/189 (87.30%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 96  VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 155

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSL+PEDAFDPNRV                     KS
Sbjct: 156 PEIIDGIVKALQAAPDAVFSTAVTSLRPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKS 215

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQY YLLHLGIQSFDSKFLS+YPEL+ TPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 216 GKVNLQYLYLLHLGIQSFDSKFLSMYPELEPTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 275

[Close]
BLAST of CmoCh04G009720 vs. ExPASy TrEMBL
Match: A0A5A7V449 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005310 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.9e-80
Identity = 161/189 (85.19%), Postives = 164/189 (86.77%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEAL KLEKKYDIVVNIQGDEPLIE
Sbjct: 95  VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALHKLEKKYDIVVNIQGDEPLIE 154

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLK EDAFDPNRV                     KS
Sbjct: 155 PEIIDGIVKALQAAPDAVFSTAVTSLKSEDAFDPNRVKCVVDSRGYAIYFSRGLIPFNKS 214

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQ+PYLLHLGIQS+DSKFLSIYPEL+ TPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 215 GKVNLQFPYLLHLGIQSYDSKFLSIYPELEPTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 274

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: XP_022941614.1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita moschata])

HSP 1 Score: 322.0 bits (824), Expect = 4.0e-84
Identity = 168/189 (88.89%), Postives = 168/189 (88.89%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 96  VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 155

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 156 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPFNKS 215

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 216 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 275

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: XP_023539187.1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 322.0 bits (824), Expect = 4.0e-84
Identity = 168/189 (88.89%), Postives = 168/189 (88.89%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 96  VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 155

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 156 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKS 215

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 216 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 275

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: KAG6600729.1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.1 bits (819), Expect = 1.5e-83
Identity = 167/189 (88.36%), Postives = 167/189 (88.36%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGAD VMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 96  VVVATDDAKIAQCCKGFGADFVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 155

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 156 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPFNKS 215

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 216 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 275

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: XP_022977606.1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 318.5 bits (815), Expect = 4.4e-83
Identity = 167/189 (88.36%), Postives = 167/189 (88.36%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 96  VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 155

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLK EDAFDPNRV                     KS
Sbjct: 156 PEIIDGIVKALQAAPDAVFSTAVTSLKHEDAFDPNRVKCVVDNHGYAIYFSRGLIPFNKS 215

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 216 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 275

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: XP_038903573.1 (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Benincasa hispida])

HSP 1 Score: 315.1 bits (806), Expect = 4.9e-82
Identity = 164/189 (86.77%), Postives = 166/189 (87.83%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 94  VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 153

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIV+ALQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 154 PEIIDGIVEALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKS 213

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQYPYLLHLGIQSFDSKFLS+YPELQ TPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 214 GKVNLQYPYLLHLGIQSFDSKFLSVYPELQPTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 273

[Close]
BLAST of CmoCh04G009720 vs. TAIR 10
Match: AT1G53000.1 (Nucleotide-diphospho-sugar transferases superfamily protein )

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-76
Identity = 143/189 (75.66%), Postives = 155/189 (82.01%), Query Frame = 0 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           +VVATDD +IA+CC+GFGADV+MTSESCRNGTERCNEAL+KLEKKYD+VVNIQGDEPLIE
Sbjct: 88  IVVATDDERIAECCRGFGADVIMTSESCRNGTERCNEALEKLEKKYDVVVNIQGDEPLIE 147

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDG+VKALQ  PDAVFSTAVTSLKPED  DPNRV                     KS
Sbjct: 148 PEIIDGVVKALQVTPDAVFSTAVTSLKPEDGLDPNRVKCVVDNRGYAIYFSRGLIPYNKS 207

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN  +PY+LHLGIQSFDSKFL +Y ELQ TPLQ EEDLEQLKVLE+GYKMKVIKVDHE
Sbjct: 208 GKVNPDFPYMLHLGIQSFDSKFLKVYSELQPTPLQQEEDLEQLKVLENGYKMKVIKVDHE 267

The following BLAST results are available for this feature:
BLAST of CmoCh04G009720 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C9201.6e-7575.663-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Arabidopsis th... [more]
Q9M4G33.4e-7071.963-deoxy-manno-octulosonate cytidylyltransferase OS=Zea mays OX=4577 GN=KDSB PE=1... [more]
Q6MD007.4e-2541.153-deoxy-manno-octulosonate cytidylyltransferase OS=Protochlamydia amoebophila (s... [more]
Q9Z8U94.8e-2438.713-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia pneumoniae OX=83558... [more]
A6L9D42.4e-2336.553-deoxy-manno-octulosonate cytidylyltransferase OS=Parabacteroides distasonis (s... [more]
BLAST of CmoCh04G009720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2M71.0e-8597.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104930 PE=4 SV=1[more]
A0A6J1FNY11.9e-8488.893-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Cucurbita mosc... [more]
A0A6J1IKE72.1e-8388.363-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like OS=Cucurbita... [more]
A0A6J1JB049.9e-8185.713-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Cucurbita maxi... [more]
A0A5A7V4492.9e-8085.193-deoxy-manno-octulosonate cytidylyltransferase OS=Cucumis melo var. makuwa OX=1... [more]
BLAST of CmoCh04G009720 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941614.14.0e-8488.893-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita moscha... [more]
XP_023539187.14.0e-8488.893-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucurbita pepo s... [more]
KAG6600729.11.5e-8388.363-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial, partial [Cucurbi... [more]
XP_022977606.14.4e-8388.363-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Cucurbita m... [more]
XP_038903573.14.9e-8286.773-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Benincasa hispid... [more]
BLAST of CmoCh04G009720 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G53000.11.1e-7675.66Nucleotide-diphospho-sugar transferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003329Acylneuraminate cytidylyltransferasePFAMPF02348CTP_transf_3coord: 8..105
e-value: 6.0E-21
score: 75.4
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain Acoord: 4..180
e-value: 4.0E-51
score: 175.6
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 8..175
NoneNo IPR availablePANTHERPTHR42866:SF73-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE, MITOCHONDRIAL-LIKEcoord: 8..175
NoneNo IPR availablePANTHERPTHR428663-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASEcoord: 8..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G009720.1CmoCh04G009720.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008690 3-deoxy-manno-octulosonate cytidylyltransferase activity