CmoCh04G008920 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G008920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1
Location	Cmo_Chr04: 4496466 .. 4498965 (+)
RNA-Seq Expression	CmoCh04G008920
Synteny	CmoCh04G008920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCCATGGGAGCCCTCCCCTCCTCTTCCAATGTATAAGAAACACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCTATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCACCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTCCGTATGTTTCCAGTTCATTGCATTCTCACTCTGCTATCTAAAATGAATCCCTAGGTTTTCATTGTGGTGTTCTGTACTTTTTCTGTTGAATTTATGTGCGTTTTGTTTGTGGTTTTTATTTTGGATTGCTTTGCTTGCGTTGTTCTTTGTCGATTCTTATGGTATAACGATGAGCTGATTTGCGATTTCCTTTGGATGTACGTGGTTCTGAACTTTTTTGTTTTCTGAATTCTCTCTTAGGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCATCTGAGGAATCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTAACACCTGAAGTGCCGAAAGAAGAACCGGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAATGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGATTGATCTGAAAGTAAGAACTTTTATTGAAGCCATGTGATTTATTCTTTTGCAAGCTTATCGTGTTAACCCGTAAGTAATTGTCTTTTGCCATCTCTTTTTTATCTCAACAAATGAGTGCAAAGCTACTGAGATACCCTTTTCAAATTTTTTGGATCACTTGGCTTTTCATTTTTCAAATTTTTTGGATTGCTTGCCCTTTGATTTATCTATCTATTTCTGCTTTCAATATCTTCCCATAGTCTGGATTATGGCTTGATTCCACCGTAAAATACCTTCCTTGGGTAACTTGGACGATTTTTGTCTGTGTTAACTATTGAGAATTTGGAGTCCTCTTTTTTTTAATATTTTAATTTATGGTGCTGTTGCCTTCTTTTTTTTTTAAAATGGGTTTTGGTTTTTCCCTGCATGCGTATTTCTTTCATTTCTCGTATGACCTTTCGAAGTTAGTTGCAGTGATGATATCATCAAACTTGATAGTATATACAAATGCTACATGAAAGGTCGACAATTATGTCGACCTGAGCGGTTAATCGAGCAACCTAACTTCTCTAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTCTTGCTTGTATTCAAGTTTCTTTTAAAATTGTTCTTCTCTAACTTCTCTTATTATTTTGTTGTCCATCAAAGTTTCTGTGTCTTCAGTCATAATAGGAAATTTGCTATTTCGAGATGGAAATCAGTATTTCTTATTGAAGTTTGAACTTTTATAGCTCTTGTCAATTAGGAAACACCATTTTGGAATAACTGATACTATAATGTATATGTTTTCATTTTTCGGTTTGAGATTGCTTCATCCTATGAAAGGTTTGATGGTTACTTTTGCTCACAGCTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTGAGTAGTTCTCACTTTTATATCTGTAAGATTTTGTATTGGATTAGAACTGTATGAGTAAATTGTAGGATGTCATCAATTGATTAAGTTTCTTAAGGCAAATTTAGAACCGTGCGTTCTTGTAAATCTATAGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGTAATTGCCTTCTGAACTGAAATCCTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGTGATAAATGAGCTAATAATTTTTTTTTGTTGCAACCTCTCAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTAGGGAGATAGTTATGTTTGCATAGATAGATATCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATATAGGTATTATAAATAAGAACATAGGAACGTGA

mRNA sequence

CCTCCCATGGGAGCCCTCCCCTCCTCTTCCAATGTATAAGAAACACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCTATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCACCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCATCTGAGGAATCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTAACACCTGAAGTGCCGAAAGAAGAACCGGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAATGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGATTGATCTGAAACTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTAGGGAGATAGTTATGTTTGCATAGATAGATATCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATATAGGTATTATAAATAAGAACATAGGAACGTGA

Coding sequence (CDS)

ATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCACCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCATCTGAGGAATCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTAACACCTGAAGTGCCGAAAGAAGAACCGGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAATGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGATTGATCTGAAACTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGA

Protein sequence

MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPRAAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENLPAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEPKEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG

Homology

[Close]

BLAST of CmoCh04G008920 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.2e-21
Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 147 VAVEDSLSASSATVGDSSSAENVAYNETSTAEEPKEEPKEKPVEVAQEWTLDSLIDLKLE 206
           V  E S   +   V D       A  + S +E P+ E +E          L+ L D+KL+
Sbjct: 61  VTEETSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQ-------ALEFLNDIKLD 120

Query: 207 SVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESR 266
           S   YS+ LYG GA   L+L SA+V ++++IPL PKL+E+VGLGYTLWF  R+LLFK +R
Sbjct: 121 SDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNR 180

Query: 267 DELAAKIDEIKEQVIG 283
           +EL  K+ EIK+QV+G
Sbjct: 181 EELKTKVSEIKKQVLG 189

[Close]

BLAST of CmoCh04G008920 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.4e-14
Identity = 58/163 (35.58%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 126 SSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATV------GDSSSAENVAYNETSTAEE 185
           SS  ++ P VP       A       S   SS TV      G+      +     S+ E 
Sbjct: 9   SSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEET 68

Query: 186 PKEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPL 245
              +  E   ++ ++W  D L        +K ++ +YGGGA   +WL S VVGA++S+PL
Sbjct: 69  SSIDTNELITDLKEKW--DGL-------ENKSTVLIYGGGAIVAVWLSSIVVGAINSVPL 128

Query: 246 VPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           +PK++E+VGLGYT WF  R+LLFK SR ELA  I+ +K+++ G
Sbjct: 129 LPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAG 162

[Close]

BLAST of CmoCh04G008920 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 9.9e-06
Identity = 50/180 (27.78%), Postives = 80/180 (44.44%), Query Frame = 0


Query: 112 ASSVAEENLPAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY 171
           +S++ +   P   L+S    +P           P + ++    A+ AT        NV  
Sbjct: 9   SSTIIDSRAPPSRLASASASSPS------CISLPTLPIQSHTRAAKATAYCRKIVRNVVT 68

Query: 172 NETSTAEE-----PKEEPKEKP--VEVAQE-WTLDSLIDLKLESV-DKYSLALYGGGASF 231
             T+   E      + E  E P  V+ AQE W          E V DKY++         
Sbjct: 69  RATTEVGEAPATTTEAETTELPEIVKTAQEAW----------EKVDDKYAIGSLAFAGVV 128

Query: 232 GLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
            LW  + ++ A+D +PLVP +LE+VG+GYT WF  + L+FK  R+ L  K+    + ++G
Sbjct: 129 ALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]

BLAST of CmoCh04G008920 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.3e-05
Identity = 23/77 (29.87%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 206 ESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKES 265
           +S D+  L   G      LW    ++ A+D +P++    E+VG+ ++ WF  R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 266 RDELAAKIDEIKEQVIG 283
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

[Close]

BLAST of CmoCh04G008920 vs. ExPASy TrEMBL
Match: A0A6J1FXL3 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448041 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.8e-143
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120
           AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180
           PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP
Sbjct: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 282

[Close]

BLAST of CmoCh04G008920 vs. ExPASy TrEMBL
Match: A0A6J1FR86 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448041 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.1e-135
Identity = 271/282 (96.10%), Postives = 271/282 (96.10%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120
           AAASEESYGSSPYITEERDSAAVSEDSS           PASSVAVEDSPPASSVAEENL
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSS-----------PASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180
           PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP
Sbjct: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of CmoCh04G008920 vs. ExPASy TrEMBL
Match: A0A6J1JNY2 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135
Identity = 268/282 (95.04%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPKHALPLKMP+ASRL RGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120
           AAAS++SYGSSPYITEERDSAAVSEDSSPASSVAVEDS PASSVAVEDSPPASSVAEENL
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180
           P+ENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSA+VGDSSSAENVAYNETST EEP
Sbjct: 121 PSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSL DLKLESVDKYSLALYGGGA FGLWLVS VVGA DSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYT+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 282

[Close]

BLAST of CmoCh04G008920 vs. ExPASy TrEMBL
Match: A0A6J1JR19 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.7e-133
Identity = 268/292 (91.78%), Postives = 274/292 (93.84%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPKHALPLKMP+ASRL RGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPAS----------SVAVEDSP 120
           AAAS++SYGSSPYITEERDSAAVSEDSSPASSVAVEDS PAS          SVAVEDSP
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSP 120

Query: 121 PASSVAEENLPAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVA 180
           PASSVAEENLP+ENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSA+VGDSSSAENVA
Sbjct: 121 PASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVA 180

Query: 181 YNETSTAEEPKEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAV 240
           YNETST EEPKEEPKEKPVEVAQEWTLDSL DLKLESVDKYSLALYGGGA FGLWLVS V
Sbjct: 181 YNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTV 240

Query: 241 VGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           VGA DSIPLVPKLLEIVGLGYT+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 VGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 292

[Close]

BLAST of CmoCh04G008920 vs. ExPASy TrEMBL
Match: A0A6J1JJV3 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 9.6e-129
Identity = 258/282 (91.49%), Postives = 264/282 (93.62%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPKHALPLKMP+ASRL RGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120
           AAAS++SYGSSPYITEERDSAAVSEDSS           PASSVAVEDSPPASSVAEENL
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSS-----------PASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180
           P+ENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSA+VGDSSSAENVAYNETST EEP
Sbjct: 121 PSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSL DLKLESVDKYSLALYGGGA FGLWLVS VVGA DSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYT+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of CmoCh04G008920 vs. NCBI nr
Match: XP_022943255.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita moschata] >KAG7031301.1 Protein CURVATURE THYLAKOID 1D, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 518.5 bits (1334), Expect = 3.7e-143
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120
           AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180
           PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP
Sbjct: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 282

[Close]

BLAST of CmoCh04G008920 vs. NCBI nr
Match: XP_022943256.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 492.7 bits (1267), Expect = 2.2e-135
Identity = 271/282 (96.10%), Postives = 271/282 (96.10%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120
           AAASEESYGSSPYITEERDSAAVSEDSS           PASSVAVEDSPPASSVAEENL
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSS-----------PASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180
           PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP
Sbjct: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of CmoCh04G008920 vs. NCBI nr
Match: XP_022990791.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-135
Identity = 268/282 (95.04%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPKHALPLKMP+ASRL RGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120
           AAAS++SYGSSPYITEERDSAAVSEDSSPASSVAVEDS PASSVAVEDSPPASSVAEENL
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180
           P+ENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSA+VGDSSSAENVAYNETST EEP
Sbjct: 121 PSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSL DLKLESVDKYSLALYGGGA FGLWLVS VVGA DSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYT+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 282

[Close]

BLAST of CmoCh04G008920 vs. NCBI nr
Match: KAG6600663.1 (Protein CURVATURE THYLAKOID 1D, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 485.7 bits (1249), Expect = 2.7e-133
Identity = 267/282 (94.68%), Postives = 269/282 (95.39%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPKHALPLKMPVASRLARG+HFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQQLRPKHALPLKMPVASRLARGVHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120
           AAAS+ESYGSSPYITEERDSAAVSEDSS           PASSVAVEDSPPASSVAEENL
Sbjct: 61  AAASDESYGSSPYITEERDSAAVSEDSS-----------PASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180
           PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDS SAENVAYNETSTAEEP
Sbjct: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSLSAENVAYNETSTAEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of CmoCh04G008920 vs. NCBI nr
Match: XP_022990785.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 484.2 bits (1245), Expect = 7.7e-133
Identity = 268/292 (91.78%), Postives = 274/292 (93.84%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPKHALPLKMP+ASRL RGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPAS----------SVAVEDSP 120
           AAAS++SYGSSPYITEERDSAAVSEDSSPASSVAVEDS PAS          SVAVEDSP
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSP 120

Query: 121 PASSVAEENLPAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVA 180
           PASSVAEENLP+ENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSA+VGDSSSAENVA
Sbjct: 121 PASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVA 180

Query: 181 YNETSTAEEPKEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAV 240
           YNETST EEPKEEPKEKPVEVAQEWTLDSL DLKLESVDKYSLALYGGGA FGLWLVS V
Sbjct: 181 YNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTV 240

Query: 241 VGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           VGA DSIPLVPKLLEIVGLGYT+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 VGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 292

[Close]

BLAST of CmoCh04G008920 vs. TAIR 10
Match: AT4G38100.1 (unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-22
Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 147 VAVEDSLSASSATVGDSSSAENVAYNETSTAEEPKEEPKEKPVEVAQEWTLDSLIDLKLE 206
           V  E S   +   V D       A  + S +E P+ E +E          L+ L D+KL+
Sbjct: 61  VTEETSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQ-------ALEFLNDIKLD 120

Query: 207 SVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESR 266
           S   YS+ LYG GA   L+L SA+V ++++IPL PKL+E+VGLGYTLWF  R+LLFK +R
Sbjct: 121 SDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNR 180

Query: 267 DELAAKIDEIKEQVIG 283
           +EL  K+ EIK+QV+G
Sbjct: 181 EELKTKVSEIKKQVLG 189

[Close]

BLAST of CmoCh04G008920 vs. TAIR 10
Match: AT4G01150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-15
Identity = 58/163 (35.58%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 126 SSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATV------GDSSSAENVAYNETSTAEE 185
           SS  ++ P VP       A       S   SS TV      G+      +     S+ E 
Sbjct: 9   SSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEET 68

Query: 186 PKEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPL 245
              +  E   ++ ++W  D L        +K ++ +YGGGA   +WL S VVGA++S+PL
Sbjct: 69  SSIDTNELITDLKEKW--DGL-------ENKSTVLIYGGGAIVAVWLSSIVVGAINSVPL 128

Query: 246 VPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           +PK++E+VGLGYT WF  R+LLFK SR ELA  I+ +K+++ G
Sbjct: 129 LPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAG 162

[Close]

BLAST of CmoCh04G008920 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 52.4 bits (124), Expect = 7.0e-07
Identity = 50/180 (27.78%), Postives = 80/180 (44.44%), Query Frame = 0


Query: 112 ASSVAEENLPAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY 171
           +S++ +   P   L+S    +P           P + ++    A+ AT        NV  
Sbjct: 9   SSTIIDSRAPPSRLASASASSPS------CISLPTLPIQSHTRAAKATAYCRKIVRNVVT 68

Query: 172 NETSTAEE-----PKEEPKEKP--VEVAQE-WTLDSLIDLKLESV-DKYSLALYGGGASF 231
             T+   E      + E  E P  V+ AQE W          E V DKY++         
Sbjct: 69  RATTEVGEAPATTTEAETTELPEIVKTAQEAW----------EKVDDKYAIGSLAFAGVV 128

Query: 232 GLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
            LW  + ++ A+D +PLVP +LE+VG+GYT WF  + L+FK  R+ L  K+    + ++G
Sbjct: 129 ALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]

BLAST of CmoCh04G008920 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit )

HSP 1 Score: 52.4 bits (124), Expect = 7.0e-07
Identity = 50/180 (27.78%), Postives = 80/180 (44.44%), Query Frame = 0


Query: 112 ASSVAEENLPAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY 171
           +S++ +   P   L+S    +P           P + ++    A+ AT        NV  
Sbjct: 9   SSTIIDSRAPPSRLASASASSPS------CISLPTLPIQSHTRAAKATAYCRKIVRNVVT 68

Query: 172 NETSTAEE-----PKEEPKEKP--VEVAQE-WTLDSLIDLKLESV-DKYSLALYGGGASF 231
             T+   E      + E  E P  V+ AQE W          E V DKY++         
Sbjct: 69  RATTEVGEAPATTTEAETTELPEIVKTAQEAW----------EKVDDKYAIGSLAFAGVV 128

Query: 232 GLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
            LW  + ++ A+D +PLVP +LE+VG+GYT WF  + L+FK  R+ L  K+    + ++G
Sbjct: 129 ALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]

BLAST of CmoCh04G008920 vs. TAIR 10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 5.9e-06
Identity = 23/77 (29.87%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 206 ESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKES 265
           +S D+  L   G      LW    ++ A+D +P++    E+VG+ ++ WF  R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 266 RDELAAKIDEIKEQVIG 283
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

The following BLAST results are available for this feature:

BLAST of CmoCh04G008920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDD3	2.2e-21	44.12	Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O04616	4.4e-14	35.58	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LCA1	9.9e-06	27.78	Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M812	8.3e-05	29.87	Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CmoCh04G008920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXL3	1.8e-143	100.00	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1FR86	1.1e-135	96.10	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1JNY2	1.4e-135	95.04	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1JR19	3.7e-133	91.78	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1JJV3	9.6e-129	91.49	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxim...	[more]

BLAST of CmoCh04G008920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943255.1	3.7e-143	100.00	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita moschat...	[more]
XP_022943256.1	2.2e-135	96.10	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschat...	[more]
XP_022990791.1	2.8e-135	95.04	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita maxima]	[more]
KAG6600663.1	2.7e-133	94.68	Protein CURVATURE THYLAKOID 1D, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
XP_022990785.1	7.7e-133	91.78	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita maxima]	[more]

BLAST of CmoCh04G008920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38100.1	1.6e-22	44.12	unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 pl...	[more]
AT4G01150.1	3.1e-15	35.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G46820.1	7.0e-07	27.78	photosystem I P subunit	[more]
AT2G46820.2	7.0e-07	27.78	photosystem I P subunit	[more]
AT1G52220.1	5.9e-06	29.87	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 209..282 e-value: 2.3E-23 score: 81.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..98
None	No IPR available	PANTHER	PTHR33222:SF2	PROTEIN CURVATURE THYLAKOID 1D, CHLOROPLASTIC	coord: 3..282
IPR033344	Protein CURVATURE THYLAKOID 1	PANTHER	PTHR33222	FAMILY NOT NAMED	coord: 3..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G008920.1	CmoCh04G008920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid