CmoCh04G007230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G007230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	F-box protein SKIP8-like
Location	Cmo_Chr04: 3600282 .. 3607342 (-)
RNA-Seq Expression	CmoCh04G007230
Synteny	CmoCh04G007230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCGATTACGTTGCCATTTCTCAGTCGACAAGTGAAGCTTGAGAAGGATGCAAAATCTGTATGTTCTTTGTTATGACCTCTCATTGTCATGCCTCTGTTCTTGCAATGGCTGCTCGCTTTTTGCCGTTTTGCATCACTTAAATTGAGATATAGGAAAGACCGTCAAATTATGCTCTCGCTAAAGAGCTTGAAGCTTGCAAGAGAGTTCTCTCATACAAAAATCATCATCTTTTTAAGCTCATAGGTAAACATTTTCAATTCTATTTTATTTGCATCTTTATATTTTTAATTGTTCTATTTTTCCTACATGCTTACTGGTTTGTCATTAAAATCTTGCATTAATCAAATTTCTAATCCTCCATATTTATTATACTAAAAAGTAGATTTTATCATGGAATAAAATTAAAATAATTTTCTTTATGTAAAGTTGATGACTAAAATAGGATATTTTAAATTTGAAGATAGGATTATTTAATAATTACCTTTTTGTTATAAAAGTTCATCCAATCAAAACATATCTCACTTTTGATTTTTCTAATGGCATTCAAATAAATCAACGTACTTTTTCATAACAAATAAAACAAAACTAGAATTAAGACCATACAGTATCTTAATTATGTCATTAATTAATGAAATTAATCATACTGTTTTACTAGCAAGGAGTCGAAATTACGAAAATACCCCCACGATTAACTGACTGATAGAGAAGTTTCACACGTTTGGAAAATTTTCCCTTTTTTCTCGTCTGTTACGATACCGTTCACGGGTCTGGTCACTAACCAAAACCTCCTCCTCCTCCTCCACCTCTCCGATTCAACTGAAATTCCTATTCCGTCACCGGAGGTCATTTCCACGACGTCATCTCCAGCGCCGGCCAACGCATTTCATGTTCCGAACTCCATAGTTGTTTTTTTATTCTGCGGTTTGGCTTCTTCTCTTGTCGACGGCGTGTTTACTGACCTCCCGCTGAAAACTGGACGCCATAGATTTTTCTAGGGTTTCATGTTCTGTGAGGTTCAAAGTCATACTCATACAGAGGCTTTCATGTCGTCCGAATGGAGATTGCCTCTGCTGTCACCGTTGCCTTGTGGTCCCAACCCTTTCCGATAGCTGCGATTGTTACTTTTCTTTGCTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATTGGTTTCTGTTCCTTTTATTAGGAGGACGAAAGCGCTTCAATCGGAGGGCGTGGGTACGAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTTTGGACCCCAGGGCTGAGGTTACTTCTTCGACCCGTACGACTATGCCTTATTTGAACGGTCGTGTAGTGGAAGTGTTGGAGAAGACGCCGATGGTTGTGACGGAGCGGCAGACAGGCGCCTCGATGATGGAACAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTGTGCCGTTTGTCCATGACGAATTCGTTGATGCGCAAGGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGTATAGGTTAGGTTTAATGTTCTTTTGTATGGTTTTCGTCTGAACTGCTGGAGTTGCGGTAATTTTTTTTTTCTTCTGGAAGATGAGTACCGAGGTAGAAACACGACGGGATTTCAGAATTGTGTGTACTTGGCAATTTGTTAAGAACTCTTGCTACCATCGTCTCGTCTACATTCATTCAATTACTTCAGCGTCTTCTAGTGATTCTGGACGGAAACGAATTGGCTATATTTTTATCTTTCAAGTAATGAAATCGTTCCAGTTTATGGCTTGTGATCACAGTTCTTGGATTGACAAGAGCTACCTCTGTTCTTCGTTTGTGTACTGTTCTGGATGCTTAAATCTATTTCTCTGGGGCTAAAAGAACTTTTTCCATTTAATCTTCTAGGACTTCTCACTGGAACAGGATACTGTGACTCCAATTAACGGGTGGAAGGCGTACTATGCTGCAACAAGAACAATTATGAACATCAATGCCCAATTCTGTAACATCATCAGAGAGAGGTCCCTTCAAGCCATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAATGTATTCATGCCTCAGGAGAATTCTTTTCCGGGTACTTTCCTCATTCTCTCTCTCTCTATGAATATTGCTATATTTTTTGCCATGAAATCCGACTGCTGCATGATATGGCTTACTAAATTATCCAACACGTCTGACATCTGTTTATTTCAAGACTTGGGAGCTCGCATATATGACCCCTTTTTGTTGTCTCACTCGTCAGATCTTTACATATTTTAAGCATTTTTTTTATTAAGAAGAAGGTGATATACAAGGGATTATCAGAAATGACATGAGGCTTATGATTACTGTCATGTGGGTGCTAATGGCTATCTGATTACCGTCATAAGCCAAATTTTGAAAAGTCAAAAAATAGTTTTTAAAAACTTGTTTTTGCTTTTATAATTTTGGCTAAGAATTCAAACATTTTTTTTTTAAAGAAATGTGAAAACCATAGTAAAGAAATTGCAAGGGAACAAACACAATTTTCAAAAACAGAAATCTAAAATTAAAATTGTTATTGAACGGCCAAGTTTCTAGTAGTTTTGTTCTATAGAGCATTTGAGGACAATAATTTATTATCAATGTTGAGGCCGGCAATAGACCTTAACCTCGTGTCTGTATTGTTGTCACTTGATAAAGCAATTTTATGAGACTTCGGATAAAGGGTTTTCTTCTTATTTTTGCACAATTTTCTCATTTATTTTGGAAGATCCATCTTTAGACGCTGAAACATGGGCCAATATGTTCGTATGTTGCCTCAACTATTTGTGGTAGACCGATGCTGCATTATGGGCTTTGTTCTTTTTGAATCTGGCTGTATCTAAATGTTTCTTGTGGGAAAGATTTTGCCATGTGCATGGTTAACTACATTACATGATTAATGCTCTGCGTTTATTTACTTGGCCTTCTAGAACAAAAGCAAATGTGTTACGTTAGTGTGAAGCTATGAGGAATAAGGATGTAGAATATATCCATTAATTTGTATTAATCTTCTAACTTCAACTTAGACTAGATGATATATTATTATATATTGACTTGCATAAACTTCGGCATGTCAATTGGTAGACCTGTTGACATGGGTTAACTCCACATCAATTTCATAACGCAGCTTCAGCACAAGGAACTGATAAGGTGGAACTTTCCTGATAATTTCGCAAGTAACCTTTGCGATCAACAAAGACACTTACTAATTTTAGGGGTGAACTATGTTGAAGGGATTGAATATTGAACCTGTGAAGTTGCTATATCTAGATGGTATGATATAAACAATTTATTGTGAAAGGCTATTTATGTATGTTATTTTATGCAATAACTCTATGAATTCCTATTATATGTTAGAGTTAAAGCTTTCAAATAAATTCATATAATCTAGTACTTAACATGTTGGGGTTTTCCTTTTAACAGGTATAACGCAGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAACAAGGGATTAATTTTCAGGTCCGCGACGTACGGGCTCGTGTCCTAACAGACATGGCTTGGGTTAGCATGAAAACCTACGTCGACATGGATACAGGGCCATTCAATGTGACTAACGTCTATGAGTACCATAACGGTCGATGGTACATGGTGCATCATCACAGCTCAGTGATGCTTATTGTTGGGGAGGTGGAAGAACAAATGGCTCATGGGTAACAGAGCAAAGATAGAAGAGAAGAAAACCATGAAAATATAGAATTACTAAGTCAAAGATAGATGATGTCTGGTAGCAGAAGCAAGATTCCTTCTTAACAGCACCAGAATCAAGTGTTCGAACCTCAGTTTTGCTTGAGCTATGTTGATTGCTGCGCCCTTTTTCTTTCAATGTTTTGGTCCCTAATTCTTTTGTTGGTTCAGAGGTTTCAGGAATGGAATTCAATCCTGGGAATGAGGTAAATGATGAGTTTTAGAAGTATTTTTGGTTGGTTTGGTTCATGCTCAAATGGCTGCTGCATGTGCTTTCACCAATGAAGGATCATCCCCATTATCTGTACTTTAATTTCTTGATCGATTGACTGCTACACTTCGACAGGTATATGACTTGTTCAATGACTTGTGTGTAAAGAAGAAAGGATAAGCAACTTTGGATGAGACTCTATTGCAAATGTGCAAGATTTTCTCTTCAGAAACGCCCAATGTTAAAGCATGATGGGGGTAATGCCTGTTGGTTAAATTACAAATGTCCCCTATGTTTAGATGAATATTTGAATTTAATCCATATGATTTTAAAAGTTGTAATTTTGACATTATGATTTGATTAAATGTTAATGTCAACGGGAATTTTATTTTATGGAAATGTTGAATGAAAATTTTATAATTTTATAAAAAAAATTAAGATGCTTAATTTTTGTGGTTACTGAACCCGAAAAGAGGAAAATATTGGGTCGTCTCCCAATTGGAGAAGGGCTATCTCACTTGGCTGCCCACGGCCTTCTTTCTCAACGCAAATTGAAAACAAGCTGGAAATTTCCAATCGACTTGGAATTCTGTGAGCCTCTAATTCCCCACCGGAGCAAAGAATATCCGTGCCCCTGTTGTCTCGTGCCCACCACGCACAGATGGGCTCTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAGCTCCATTCTTCCACTCCTCCTATGCAACCACTCCGAGATTGTCTCATGGACCCATAACTTCACTCAGATTTTCATCATCTAGGGGCGTCAGCTTCCTCTCTTCCTCCTCTTCCTCCTCTTCTTCTTCTTCTGTTGTAGATGAAGAAACAAATTCTTCTCCTCCCGACGACCTCTCTCTTCAGTCTGAATCAGACCCTGATGGTTCTTCGTTCAGGTATTGATGATTTGATCCTTCGTCTCTCTGTTTGCAAGATTCTGATGATAGAAGAGTGATTTTGATAACTTTAATTCCATGGTGGTTCTGTGTTTGTTTATTGGATTACATTTATTTATGTTTTCTACTCGAGAGTGAGCGAATTGAGAGCGACTATGTCATTTGTCTAGCTACGAGAACTGTGTTCTAAGTAGAACATTCTCCTCTTGAAGTTTGGATTGAATTACTCCAAATGATGCCGAAGGATGGAGGAGCTCTAGCATTTGGTAAATAAACGAGGGTGAAAATTCTAGTTGATGAGTATTGCTCTAGTTGATTATCATCCATAAAACTTCCTTTGAATTTTCGGTTTTCCCCTACGACTATCCATATGGATGCTCATGCTCTGGTTGAGAAGTTAAATATGTCCTAAATTTGAAATAGTCACCTTAAGAGGGAAAACATGCGTCAATTTTCCTTGTTTCTCCTAGGAACTAGTTAAACAAACAAGATGTGGGAAGAACAAAATAACCTCTGAGCTGCCTCTGCTCATACTCAATCCGATTGGTGTAATCAGCTGAGAACAAGACTTGGTTCAGCACTTAAAATCAGTATCATCCCATCATGACTGAATGTCTCTCTATTTCGCTTGTTCTTGTACATATTATAGGCCATGTATTTCAGTGTGTAAAGGACATGAATTGAATCAGTCCACAATGCAGAGTGAAAACTAGTTGGAACGGTTCATTTCAAACCACACCTGGGGTCTCTTGAGACCATCAATTTAGATATATTCAAGTCATTTTCACTTAGAATGTTATGGTCTGGCCTTAACTTATAATAATGATGGTGCCAACGATATGGCTTAGAACAATCTTGTTTTCTCTTTCATTTCTTATAAACAGAGGATGCAAAGCCTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGAATTTGTAGCATCCGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCAAGGACAGAAGCCTCCGCTGCTGCTGGCAAAAAGGACTCGTTGAGGTACAAGCCATATATCCCTTTCCTTATGAAGTAAATTCATATGTTTATATACTTTCAGAACTTGTAATGTTGCAATCTAACATGCTGCTCTTGTATACTGACTTGCAAAATGACCAAACCGAATGCTTGATACCAATTTTGTGAACTTGCTCACACCATAGGGATAAGAATAGCTGGAAGTTTGGCGAAAATAGCTTCTTCCATTTTTCTTTGGCTGGGAGAAATGAAAGTATTATCTCATTATCCGAGTACTGTAGGAGAGGAAGGCCATCTCGAAATGGCATGGTTGCTTTCATGACTGGTTTCTGGGTTGCCAGTCAAATTCTCTTGTTAGCTTCATTTTGTTCTCATTGTTCCTTATCAGCCTGATAGTAAGAGAAGGTAGCTGTTAGGATTAGGATTTCCATAATGTGACCAAGCTTCTTGTTATCATTGTGGTTTTGGATTTCCCCTGTTGTTTTTCTTGAATTTCCTTCATGTTTTACTTTGAGTTTCTAACTTTAAACAATACCGATTCATTCACTTTTCGTTACGTCGTTTCGTCCAGCAAGAAAAAGTCGGCGAAGGGGTAATATAGGCAGCCTTACCATCCACAAGTTGATACACAAACAGGGAGGGAATGAAGGGTGGATGATGTAGAATTGGTTTCATGGAAATAGTACATGTGAATGGGTGAAAACTGAACAACAAAATCTCATTGGGATTTTTCTGTATTGAAATTTGGCTAGATTCTCACTTCTTTAGGCTTCTGTAACATCAGAATGCTGCATTTAAAGCACAGAAAATTTTCCAATCCATGGTTTGTTTGAAGCGTATCAAGATTCATTCTTTGCAGGATATTTTCTCTTCCAGTTCCTAACGGATGCCTTGTTTGTTCTCTCATGCCTAGTTCTCCCAGGAATATTTCACCAAAGCAGTATGATTTCAACAAATTTGAACTGGAAGTTGGTATGAGCAGGTGATCATACTTGGGATTTCTTCTTTCTTTTTTTCTTTTTTTCCCCTTAATTCTTACATAAATGAATGAGAAATCAAG

mRNA sequence

ATGACTTCGATTACGTTGCCATTTCTCAGTCGACAAGTGAAGCTTGAGAAGGATGCAAAATCTGAAAGACCGTCAAATTATGCTCTCGCTAAAGAGCTTGAAGCTTGCAAGAGAGTTCTCTCATACAAAAATCATCATCTTTTTAAGCTCATAGGTTCAAAGTCATACTCATACAGAGGCTTTCATGTCGTCCGAATGGAGATTGCCTCTGCTGTCACCGTTGCCTTGTGGTCCCAACCCTTTCCGATAGCTGCGATTGTTACTTTTCTTTGCTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATTGGTTTCTGTTCCTTTTATTAGGAGGACGAAAGCGCTTCAATCGGAGGGCGTGGGTACGAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTTTGGACCCCAGGGCTGAGGTTACTTCTTCGACCCGTACGACTATGCCTTATTTGAACGGTCGTGTAGTGGAAGTGTTGGAGAAGACGCCGATGGTTGTGACGGAGCGGCAGACAGGCGCCTCGATGATGGAACAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTGTGCCGTTTGTCCATGACGAATTCGTTGATGCGCAAGGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGACTTCTCACTGGAACAGGATACTGTGACTCCAATTAACGGGTGGAAGGCGTACTATGCTGCAACAAGAACAATTATGAACATCAATGCCCAATTCTGTAACATCATCAGAGAGAGGTCCCTTCAAGCCATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAATGTATTCATGCCTCAGGAGAATTCTTTTCCGGGTATAACGCAGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAACAAGGGATTAATTTTCAGGTCCGCGACGTACGGGCTCGTGTCCTAACAGACATGGCTTGGGTTAGCATGAAAACCTACGTCGACATGGATACAGGGCCATTCAATGTGACTAACGTCTATGAGTACCATAACGGTCGATGGTACATGGTGCATCATCACAGCTCAGTGATGCTTATTGTTGGGGAGCACCAGAATCAAGTGTTCGAACCTCAGTTTTGCTTGAGCTATGTTGATTGCTGCGCCCTTTTTCTTTCAATGTTTTGGTCCCTAATTCTTTTGTTGGTTCAGAGGTTTCAGGAATGGAATTCAATCCTGGGAATGAGAAGAAAGGATAAGCAACTTTGGATGAGACTCTATTGCAAATGTGCAAGATTTTCTCTTCAGAAACGCCCAATGTTAAAGCATGATGGGGCCTCTAATTCCCCACCGGAGCAAAGAATATCCGTGCCCCTGTTGTCTCGTGCCCACCACGCACAGATGGGCTCTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAGCTCCATTCTTCCACTCCTCCTATGCAACCACTCCGAGATTGTCTCATGGACCCATAACTTCACTCAGATTTTCATCATCTAGGGGCGTCAGCTTCCTCTCTTCCTCCTCTTCCTCCTCTTCTTCTTCTTCTGTTGTAGATGAAGAAACAAATTCTTCTCCTCCCGACGACCTCTCTCTTCAGTCTGAATCAGACCCTGATGGTTCTTCGTTCAGAGGATGCAAAGCCTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGAATTTGTAGCATCCGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCAAGGACAGAAGCCTCCGCTGCTGCTGGCAAAAAGGACTCGTTGAGCAAGAAAAAGTCGGCGAAGGGGTAATATAGGCAGCCTTACCATCCACAAGTTGATACACAAACAGGGAGGGAATGAAGGGTGGATGATGTAGAATTGGTTTCATGGAAATAGTACATGTGAATGGGTGAAAACTGAACAACAAAATCTCATTGGGATTTTTCTGTATTGAAATTTGGCTAGATTCTCACTTCTTTAGGCTTCTGTAACATCAGAATGCTGCATTTAAAGCACAGAAAATTTTCCAATCCATGGTTTGTTTGAAGCGTATCAAGATTCATTCTTTGCAGGATATTTTCTCTTCCAGTTCCTAACGGATGCCTTGTTTGTTCTCTCATGCCTAGTTCTCCCAGGAATATTTCACCAAAGCAGTATGATTTCAACAAATTTGAACTGGAAGTTGGTATGAGCAGGTGATCATACTTGGGATTTCTTCTTTCTTTTTTTCTTTTTTTCCCCTTAATTCTTACATAAATGAATGAGAAATCAAG

Coding sequence (CDS)

ATGACTTCGATTACGTTGCCATTTCTCAGTCGACAAGTGAAGCTTGAGAAGGATGCAAAATCTGAAAGACCGTCAAATTATGCTCTCGCTAAAGAGCTTGAAGCTTGCAAGAGAGTTCTCTCATACAAAAATCATCATCTTTTTAAGCTCATAGGTTCAAAGTCATACTCATACAGAGGCTTTCATGTCGTCCGAATGGAGATTGCCTCTGCTGTCACCGTTGCCTTGTGGTCCCAACCCTTTCCGATAGCTGCGATTGTTACTTTTCTTTGCTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATTGGTTTCTGTTCCTTTTATTAGGAGGACGAAAGCGCTTCAATCGGAGGGCGTGGGTACGAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTTTGGACCCCAGGGCTGAGGTTACTTCTTCGACCCGTACGACTATGCCTTATTTGAACGGTCGTGTAGTGGAAGTGTTGGAGAAGACGCCGATGGTTGTGACGGAGCGGCAGACAGGCGCCTCGATGATGGAACAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTGTGCCGTTTGTCCATGACGAATTCGTTGATGCGCAAGGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGACTTCTCACTGGAACAGGATACTGTGACTCCAATTAACGGGTGGAAGGCGTACTATGCTGCAACAAGAACAATTATGAACATCAATGCCCAATTCTGTAACATCATCAGAGAGAGGTCCCTTCAAGCCATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAATGTATTCATGCCTCAGGAGAATTCTTTTCCGGGTATAACGCAGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAACAAGGGATTAATTTTCAGGTCCGCGACGTACGGGCTCGTGTCCTAACAGACATGGCTTGGGTTAGCATGAAAACCTACGTCGACATGGATACAGGGCCATTCAATGTGACTAACGTCTATGAGTACCATAACGGTCGATGGTACATGGTGCATCATCACAGCTCAGTGATGCTTATTGTTGGGGAGCACCAGAATCAAGTGTTCGAACCTCAGTTTTGCTTGAGCTATGTTGATTGCTGCGCCCTTTTTCTTTCAATGTTTTGGTCCCTAATTCTTTTGTTGGTTCAGAGGTTTCAGGAATGGAATTCAATCCTGGGAATGAGAAGAAAGGATAAGCAACTTTGGATGAGACTCTATTGCAAATGTGCAAGATTTTCTCTTCAGAAACGCCCAATGTTAAAGCATGATGGGGCCTCTAATTCCCCACCGGAGCAAAGAATATCCGTGCCCCTGTTGTCTCGTGCCCACCACGCACAGATGGGCTCTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAGCTCCATTCTTCCACTCCTCCTATGCAACCACTCCGAGATTGTCTCATGGACCCATAACTTCACTCAGATTTTCATCATCTAGGGGCGTCAGCTTCCTCTCTTCCTCCTCTTCCTCCTCTTCTTCTTCTTCTGTTGTAGATGAAGAAACAAATTCTTCTCCTCCCGACGACCTCTCTCTTCAGTCTGAATCAGACCCTGATGGTTCTTCGTTCAGAGGATGCAAAGCCTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGAATTTGTAGCATCCGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCAAGGACAGAAGCCTCCGCTGCTGCTGGCAAAAAGGACTCGTTGAGCAAGAAAAAGTCGGCGAAGGGGTAA

Protein sequence

MTSITLPFLSRQVKLEKDAKSERPSNYALAKELEACKRVLSYKNHHLFKLIGSKSYSYRGFHVVRMEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVMLIVGEHQNQVFEPQFCLSYVDCCALFLSMFWSLILLLVQRFQEWNSILGMRRKDKQLWMRLYCKCARFSLQKRPMLKHDGASNSPPEQRISVPLLSRAHHAQMGSALLSVPAPQRAPFFHSSYATTPRLSHGPITSLRFSSSRGVSFLSSSSSSSSSSSVVDEETNSSPPDDLSLQSESDPDGSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSLSKKKSAKG

Homology

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BLAST of CmoCh04G007230 vs. ExPASy Swiss-Prot
Match: Q93YV9 (F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.3e-90
Identity = 151/201 (75.12%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 167 TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 226
           T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH
Sbjct: 23  TTSTVADDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 82

Query: 227 KDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHA 286
           KDF+LEQD +TP+NGWK YYA TR I+++N +F  IIR+R+LQAM+  WLN+DYVKCIHA
Sbjct: 83  KDFTLEQDGITPVNGWKEYYATTRAIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHA 142

Query: 287 SGEFFSGYNAVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN 346
           SGE FSGYN VIQSWQ+ FNWEQG +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN
Sbjct: 143 SGELFSGYNEVIQSWQLCFNWEQGFDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITN 202

Query: 347 VYEYHNGRWYMVHHHSSVMLI 368
           V+E+HNGRW+MVHHHSSVMLI
Sbjct: 203 VFEFHNGRWHMVHHHSSVMLI 223

[Close]

BLAST of CmoCh04G007230 vs. ExPASy Swiss-Prot
Match: Q9T0B0 (Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 6.7e-34
Identity = 65/115 (56.52%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 180 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPI 239
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++F+ E +  TP+
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 240 NGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGY 295
           NGWKA++A T+ +M +N +F +I+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

[Close]

BLAST of CmoCh04G007230 vs. ExPASy TrEMBL
Match: A0A6J1FVP4 (F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111447294 PE=4 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 7.6e-174
Identity = 306/310 (98.71%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN
Sbjct: 1   MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVGE + Q+
Sbjct: 301 LIVGEVEEQM 310

[Close]

BLAST of CmoCh04G007230 vs. ExPASy TrEMBL
Match: A0A6J1J3L2 (F-box protein SKIP8-like OS=Cucurbita maxima OX=3661 GN=LOC111480964 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 2.3e-170
Identity = 298/310 (96.13%), Postives = 306/310 (98.71%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEIA+A T+ALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG+GTRNCN
Sbjct: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQFC+IIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVG+ + Q+
Sbjct: 301 LIVGDVEEQM 310

[Close]

BLAST of CmoCh04G007230 vs. ExPASy TrEMBL
Match: A0A6J1EUJ3 (F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 8.7e-162
Identity = 284/310 (91.61%), Postives = 298/310 (96.13%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEIASA T+AL SQPFPIAAIVTFLCFLLALFAAVRLVSVP+IRRTK +Q EGVGTRN N
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGV IGGL+PRAE+TSST T+MPYLNGR VEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDF+LEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQF NIIR+RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVGE + Q+
Sbjct: 301 LIVGEMEQQM 310

[Close]

BLAST of CmoCh04G007230 vs. ExPASy TrEMBL
Match: A0A0A0KX34 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 4.3e-161
Identity = 281/310 (90.65%), Postives = 296/310 (95.48%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEI S+ T+AL SQPFPIAAIVTFLCFLLA+F AVRLVSVP+IRRTK LQSE VGTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVGTRNCN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGVVI GLDPRAE+TSST T+MPYLNGR VEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQF NIIR+RSLQAMS FWLNADYVKCIHASGEFFSGYNAV+QSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVGE + Q+
Sbjct: 301 LIVGEMEQQM 310

[Close]

BLAST of CmoCh04G007230 vs. ExPASy TrEMBL
Match: A0A5A7TU63 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003610 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 9.6e-161
Identity = 281/310 (90.65%), Postives = 297/310 (95.81%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEI S+ T+AL SQPFPIAAIVTFLCFLLA+F AVRLVSVP+IRRTK+LQSE VGTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGVVI GLDPRAE+TSST T+MPYLNGR VEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQF NIIR+RSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+H+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVGE + Q+
Sbjct: 301 LIVGEMEQQM 310

[Close]

BLAST of CmoCh04G007230 vs. NCBI nr
Match: XP_022942140.1 (F-box protein SKIP8-like [Cucurbita moschata])

HSP 1 Score: 620.5 bits (1599), Expect = 1.6e-173
Identity = 306/310 (98.71%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN
Sbjct: 1   MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVGE + Q+
Sbjct: 301 LIVGEVEEQM 310

[Close]

BLAST of CmoCh04G007230 vs. NCBI nr
Match: KAG7031147.1 (F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 613.6 bits (1581), Expect = 1.9e-171
Identity = 302/310 (97.42%), Postives = 305/310 (98.39%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEIASA TVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN
Sbjct: 1   MEIASAATVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKVPVVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIH SGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHPSGEFFSGYNAVIQSWQVAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVGE + Q+
Sbjct: 301 LIVGEVEEQM 310

[Close]

BLAST of CmoCh04G007230 vs. NCBI nr
Match: KAG6600509.1 (F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 612.1 bits (1577), Expect = 5.6e-171
Identity = 301/310 (97.10%), Postives = 304/310 (98.06%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEIASA TVALWSQPFPIAAIVTFLCFLLALF AVRLVSVPFIRRTKALQSEGVGTRNCN
Sbjct: 1   MEIASAATVALWSQPFPIAAIVTFLCFLLALFVAVRLVSVPFIRRTKALQSEGVGTRNCN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKVPVVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIH SGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHPSGEFFSGYNAVIQSWQVAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVGE + Q+
Sbjct: 301 LIVGEVEEQM 310

[Close]

BLAST of CmoCh04G007230 vs. NCBI nr
Match: XP_022981983.1 (F-box protein SKIP8-like [Cucurbita maxima])

HSP 1 Score: 609.0 bits (1569), Expect = 4.7e-170
Identity = 298/310 (96.13%), Postives = 306/310 (98.71%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEIA+A T+ALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG+GTRNCN
Sbjct: 1   MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQFC+IIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Sbjct: 241 NWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVG+ + Q+
Sbjct: 301 LIVGDVEEQM 310

[Close]

BLAST of CmoCh04G007230 vs. NCBI nr
Match: XP_038880969.1 (F-box protein SKIP8-like [Benincasa hispida])

HSP 1 Score: 581.3 bits (1497), Expect = 1.1e-161
Identity = 284/310 (91.61%), Postives = 298/310 (96.13%), Query Frame = 0


Query: 66  MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGVGTRNCN 125
           MEI S+ T+AL SQPFPIAAIVTFLCFLLALFAAVRLVSVP+IRRTKALQS  +GTRNCN
Sbjct: 1   MEIISSATIALSSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKALQSVALGTRNCN 60

Query: 126 CTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTGASMMEQLV 185
           CTCSLNGGVVIGGLDPRAE+TSST T+MPYLNGR VEVLEK P+VVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 186 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAY 245
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 246 YAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 305
           YAATRTIMNINAQF NIIR+RSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQ+AF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQLAF 240

Query: 306 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM 365
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 366 LIVGEHQNQV 376
           LIVGE + Q+
Sbjct: 301 LIVGEMEQQM 310

[Close]

BLAST of CmoCh04G007230 vs. TAIR 10
Match: AT4G10925.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 334.7 bits (857), Expect = 1.6e-91
Identity = 151/201 (75.12%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 167 TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 226
           T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH
Sbjct: 23  TTSTVADDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 82

Query: 227 KDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHA 286
           KDF+LEQD +TP+NGWK YYA TR I+++N +F  IIR+R+LQAM+  WLN+DYVKCIHA
Sbjct: 83  KDFTLEQDGITPVNGWKEYYATTRAIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHA 142

Query: 287 SGEFFSGYNAVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN 346
           SGE FSGYN VIQSWQ+ FNWEQG +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN
Sbjct: 143 SGELFSGYNEVIQSWQLCFNWEQGFDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITN 202

Query: 347 VYEYHNGRWYMVHHHSSVMLI 368
           V+E+HNGRW+MVHHHSSVMLI
Sbjct: 203 VFEFHNGRWHMVHHHSSVMLI 223

[Close]

BLAST of CmoCh04G007230 vs. TAIR 10
Match: AT4G10925.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 334.7 bits (857), Expect = 1.6e-91
Identity = 151/201 (75.12%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 167 TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 226
           T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH
Sbjct: 23  TTSTVADDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 82

Query: 227 KDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHA 286
           KDF+LEQD +TP+NGWK YYA TR I+++N +F  IIR+R+LQAM+  WLN+DYVKCIHA
Sbjct: 83  KDFTLEQDGITPVNGWKEYYATTRAIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHA 142

Query: 287 SGEFFSGYNAVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN 346
           SGE FSGYN VIQSWQ+ FNWEQG +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN
Sbjct: 143 SGELFSGYNEVIQSWQLCFNWEQGFDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITN 202

Query: 347 VYEYHNGRWYMVHHHSSVMLI 368
           V+E+HNGRW+MVHHHSSVMLI
Sbjct: 203 VFEFHNGRWHMVHHHSSVMLI 223

[Close]

BLAST of CmoCh04G007230 vs. TAIR 10
Match: AT4G10925.3 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 334.7 bits (857), Expect = 1.6e-91
Identity = 151/201 (75.12%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 167 TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 226
           T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH
Sbjct: 23  TTSTVADDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYH 82

Query: 227 KDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHA 286
           KDF+LEQD +TP+NGWK YYA TR I+++N +F  IIR+R+LQAM+  WLN+DYVKCIHA
Sbjct: 83  KDFTLEQDGITPVNGWKEYYATTRAIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHA 142

Query: 287 SGEFFSGYNAVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN 346
           SGE FSGYN VIQSWQ+ FNWEQG +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN
Sbjct: 143 SGELFSGYNEVIQSWQLCFNWEQGFDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITN 202

Query: 347 VYEYHNGRWYMVHHHSSVMLI 368
           V+E+HNGRW+MVHHHSSVMLI
Sbjct: 203 VFEFHNGRWHMVHHHSSVMLI 223

[Close]

BLAST of CmoCh04G007230 vs. TAIR 10
Match: AT4G23960.1 (F-box family protein )

HSP 1 Score: 147.1 bits (370), Expect = 4.7e-35
Identity = 65/115 (56.52%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 180 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPI 239
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++F+ E +  TP+
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 240 NGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGY 295
           NGWKA++A T+ +M +N +F +I+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

[Close]

BLAST of CmoCh04G007230 vs. TAIR 10
Match: AT5G42070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 9.6e-28
Identity = 79/168 (47.02%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 468 MGSALLSVPAPQRAPFFHSSYATTPRLSHGPITSLRFSSSRGVSFLSSSSSSSSSSSVVD 527
           M +++ S+  P+   F + S+ + P  S       + S       L   S SSS SSVV 
Sbjct: 1   MANSISSISLPRCFIFNNGSHKSRPWPSSSSFFLNKSSKHHPHPLL---SLSSSPSSVV- 60

Query: 528 EETNSSPPDDLSLQSESDPDGSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 587
            ET++   +DL           +F GC+ACGKEE E GCNG+GRIQGGIATVPGFGWWPI
Sbjct: 61  -ETDNDDDNDL-----------TFSGCRACGKEEKESGCNGDGRIQGGIATVPGFGWWPI 120

Query: 588 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSLSKK 636
           KAYRPCP FV +GGRY+R GQSMDEV  G   +++S +    DSL ++
Sbjct: 121 KAYRPCPAFVEAGGRYRRIGQSMDEVAFGRGDSKSSTSVDTSDSLLRQ 152

The following BLAST results are available for this feature:

BLAST of CmoCh04G007230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YV9	2.3e-90	75.12	F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1	[more]
Q9T0B0	6.7e-34	56.52	Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE...	[more]

BLAST of CmoCh04G007230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVP4	7.6e-174	98.71	F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111447294 PE=4 SV=1	[more]
A0A6J1J3L2	2.3e-170	96.13	F-box protein SKIP8-like OS=Cucurbita maxima OX=3661 GN=LOC111480964 PE=4 SV=1	[more]
A0A6J1EUJ3	8.7e-162	91.61	F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1	[more]
A0A0A0KX34	4.3e-161	90.65	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 ...	[more]
A0A5A7TU63	9.6e-161	90.65	F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0...	[more]

BLAST of CmoCh04G007230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942140.1	1.6e-173	98.71	F-box protein SKIP8-like [Cucurbita moschata]	[more]
KAG7031147.1	1.9e-171	97.42	F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600509.1	5.6e-171	97.10	F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022981983.1	4.7e-170	96.13	F-box protein SKIP8-like [Cucurbita maxima]	[more]
XP_038880969.1	1.1e-161	91.61	F-box protein SKIP8-like [Benincasa hispida]	[more]

BLAST of CmoCh04G007230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10925.1	1.6e-91	75.12	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.2	1.6e-91	75.12	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.3	1.6e-91	75.12	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G23960.1	4.7e-35	56.52	F-box family protein	[more]
AT5G42070.1	9.6e-28	47.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.50		coord: 245..374 e-value: 5.2E-31 score: 109.4
None	No IPR available	GENE3D	1.20.1280.50		coord: 167..222 e-value: 4.1E-6 score: 28.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 600..640
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 515..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 515..552
IPR037401	SnoaL-like domain	PFAM	PF13474	SnoaL_3	coord: 252..365 e-value: 1.6E-26 score: 93.0
IPR044260	F-box protein SKIP8-like	PANTHER	PTHR47124	F-BOX PROTEIN SKIP8	coord: 76..375
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 178..224 score: 8.59666
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 247..365
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 177..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G007230.1	CmoCh04G007230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005515	protein binding