CmoCh04G006980 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G006980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type E3 ubiquitin ligase
Location	Cmo_Chr04: 3461953 .. 3463398 (+)
RNA-Seq Expression	CmoCh04G006980
Synteny	CmoCh04G006980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACCCACCAGAATGGGAAGAACCCAGCCTCCATAGGTGGATTACGAGAAGGACCTCCGATCAGTGACGAGGGTACATGGGACGAAAGTGCATACGCTCAAATCAGACTTTATAAGCCTAATTTTTGTTATTGCTGTTGCAGACAAATTTGGTCTGTTGTTTTCGTGTGGGAACTACATTTATATGTTTGCATCAGAACCATATTTATATGTCTGTGTTCCTACTTTATGATATGGTCGGGTTTGCAGGCTGGAGTCTAATAATGTCCCATTTAGAAATTTCAGGGATGATGAATTTGAACTGGATCTAGAGGACATAATGGTGATGGAAGCAATCTGGCTCTCAATTCAGGTAAAAATAGCTCACCCATATATGGTACAACTGTTCTTGTTTTTCTTGTTTTGTTAATCTTTAGTTTGATTAAAGTGCATAATAATTGAAATGTTCAGGAGAAAGGAAGGCATCAAGATCCAGTTTACACTGAGGCTGCTTCCTCTGATCAATATCCGACAGAAGGTCGATATGTCTCTCCGACCACCGTTCCATTAGCTGGAACATCATCTTCATCATCATCATCATCCCCATCTGGAGGTCTTGTTTGTGCCATGGCTGCTCTTGCAGAGCAGCAGCAGATAGGCAGGGGACCGTTATCGACTTGCGCAAATGGAGATTCACCCGTCTTCAATATGCTTCCTGGAGCCACGGAGTTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCCTACAAATCTCAATCAACACAGAAAATTATACGCCTGCACAACTCTCTATCAACACGGTACCGATACCAGATTGTAGGATGATCTTAACAAGAAACGGTGGCGAGTGGAATCTGGACAATCAATCTGAAGAAGATGAAGCTGGGACAAGCTACCCAACCTCCGACTCGACCGAAGATAATGGTATTGACTGTGCCTTGCCCACAGTCCATGCGATTGATGGTGGAAACCAAACACCAATACCCATCATGCCTCAGAACTTTGAGGAGCAGATGATGCTAGCCATGGCTGTTTCTCTAGCCGAGGCTCGGGGAGTGTCTACTGGACCCGGGCATTCCTGGCAGCAGTGATTATGATTATGATTACGATTACGATTACGATCGAATCTTAACTTGAACATTCGGTTGTAGCCAATACCAACATAGCTGGCAGAGAGAGCGCGTTGGTGTCGCATCCGAGCTGCAAGGTAGGAAATCGACACAAGGAGTGGCGTGATGTTTGTTCAAAGGTTGATCTCCCTCGGCGGGTCGGGTGAAAAAAAGAAAAAGAAGTGTAAAAATGGAATACAAATTCTTTTAGTGAATTAAAATTTGGGTGGTTCATTCAAGTTCATGGATGGATGGATGGCAATATTTCCCCTTTTCTTTTCCTAATTATTGAAAATATTGTTTCAGCTTGTGGAAGTTTATAGTCCC

mRNA sequence

ATGGATACCCACCAGAATGGGAAGAACCCAGCCTCCATAGGTGGATTACGAGAAGGACCTCCGATCAGTGACGAGGACAAATTTGGTCTGTTGTTTTCGTGTGGGAACTACATTTATATGCTGGAGTCTAATAATGTCCCATTTAGAAATTTCAGGGATGATGAATTTGAACTGGATCTAGAGGACATAATGGTGATGGAAGCAATCTGGCTCTCAATTCAGGAGAAAGGAAGGCATCAAGATCCAGTTTACACTGAGGCTGCTTCCTCTGATCAATATCCGACAGAAGGTCGATATGTCTCTCCGACCACCGTTCCATTAGCTGGAACATCATCTTCATCATCATCATCATCCCCATCTGGAGGTCTTGTTTGTGCCATGGCTGCTCTTGCAGAGCAGCAGCAGATAGGCAGGGGACCGTTATCGACTTGCGCAAATGGAGATTCACCCGTCTTCAATATGCTTCCTGGAGCCACGGAGTTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCCTACAAATCTCAATCAACACAGAAAATTATACGCCTGCACAACTCTCTATCAACACGGTACCGATACCAGATTGTAGGATGATCTTAACAAGAAACGGTGGCGAGTGGAATCTGGACAATCAATCTGAAGAAGATGAAGCTGGGACAAGCTACCCAACCTCCGACTCGACCGAAGATAATGGTATTGACTGTGCCTTGCCCACAGTCCATGCGATTGATGGTGGAAACCAAACACCAATACCCATCATGCCTCAGAACTTTGAGGAGCAGATGATGCTAGCCATGGCTGTTTCTCTAGCCGAGGCTCGGGGAGTGTCTACTGGACCCGGGCATTCCTGGCAGCAGTGATTATGATTATGATTACGATTACGATTACGATCGAATCTTAACTTGAACATTCGGTTGTAGCCAATACCAACATAGCTGGCAGAGAGAGCGCGTTGGTGTCGCATCCGAGCTGCAAGGTAGGAAATCGACACAAGGAGTGGCGTGATGTTTGTTCAAAGGTTGATCTCCCTCGGCGGGTCGGGTGAAAAAAAGAAAAAGAAGTGTAAAAATGGAATACAAATTCTTTTAGTGAATTAAAATTTGGGTGGTTCATTCAAGTTCATGGATGGATGGATGGCAATATTTCCCCTTTTCTTTTCCTAATTATTGAAAATATTGTTTCAGCTTGTGGAAGTTTATAGTCCC

Coding sequence (CDS)

ATGGATACCCACCAGAATGGGAAGAACCCAGCCTCCATAGGTGGATTACGAGAAGGACCTCCGATCAGTGACGAGGACAAATTTGGTCTGTTGTTTTCGTGTGGGAACTACATTTATATGCTGGAGTCTAATAATGTCCCATTTAGAAATTTCAGGGATGATGAATTTGAACTGGATCTAGAGGACATAATGGTGATGGAAGCAATCTGGCTCTCAATTCAGGAGAAAGGAAGGCATCAAGATCCAGTTTACACTGAGGCTGCTTCCTCTGATCAATATCCGACAGAAGGTCGATATGTCTCTCCGACCACCGTTCCATTAGCTGGAACATCATCTTCATCATCATCATCATCCCCATCTGGAGGTCTTGTTTGTGCCATGGCTGCTCTTGCAGAGCAGCAGCAGATAGGCAGGGGACCGTTATCGACTTGCGCAAATGGAGATTCACCCGTCTTCAATATGCTTCCTGGAGCCACGGAGTTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCCTACAAATCTCAATCAACACAGAAAATTATACGCCTGCACAACTCTCTATCAACACGGTACCGATACCAGATTGTAGGATGATCTTAACAAGAAACGGTGGCGAGTGGAATCTGGACAATCAATCTGAAGAAGATGAAGCTGGGACAAGCTACCCAACCTCCGACTCGACCGAAGATAATGGTATTGACTGTGCCTTGCCCACAGTCCATGCGATTGATGGTGGAAACCAAACACCAATACCCATCATGCCTCAGAACTTTGAGGAGCAGATGATGCTAGCCATGGCTGTTTCTCTAGCCGAGGCTCGGGGAGTGTCTACTGGACCCGGGCATTCCTGGCAGCAGTGA

Protein sequence

MDTHQNGKNPASIGGLREGPPISDEDKFGLLFSCGNYIYMLESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ

Homology

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BLAST of CmoCh04G006980 vs. ExPASy Swiss-Prot
Match: A4GWX9 (E3 ubiquitin-protein ligase GW2 OS=Oryza sativa subsp. indica OX=39946 GN=GW2 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.2e-18
Identity = 78/245 (31.84%), Postives = 108/245 (44.08%), Query Frame = 0


Query: 49  RNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPV------YTEAASSDQYPTEGRYVSP 108
           R+ RDD  ++++ED+MVMEAIW SIQE+G   +PV       TE +  ++ P        
Sbjct: 213 RHNRDDNIDMNIEDMMVMEAIWRSIQEQGSIGNPVCGNFMPVTEPSPRERQP-------- 272

Query: 109 TTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFY 168
             VP A     S      GG  CA+AA+AE Q           +   PVF+M        
Sbjct: 273 -FVPAA-----SLEIPHGGGFSCAVAAMAEHQPPSMDFSYMAGSSAFPVFDMFRRPCNIA 332

Query: 169 NRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAG 228
                N+E+ P     I                 P C   + R  GE + D+ SE  EAG
Sbjct: 333 GGSMCNLESSPESWSGI----------------APSCSREVVREEGECSADHWSEGAEAG 392

Query: 229 TSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTG 288
           TSY  SD   D G    +P +   +     P    P++ EEQMM +MA+SLA+  G +  
Sbjct: 393 TSYAGSDIVADAG---TMPQLPFAENFAMAPSHFRPESIEEQMMFSMALSLADGHGRTHS 424

[Close]

BLAST of CmoCh04G006980 vs. ExPASy Swiss-Prot
Match: B9F4Q9 (E3 ubiquitin-protein ligase GW2 OS=Oryza sativa subsp. japonica OX=39947 GN=GW2 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.2e-18
Identity = 78/245 (31.84%), Postives = 108/245 (44.08%), Query Frame = 0


Query: 49  RNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPV------YTEAASSDQYPTEGRYVSP 108
           R+ RDD  ++++ED+MVMEAIW SIQE+G   +PV       TE +  ++ P        
Sbjct: 213 RHNRDDNIDMNIEDMMVMEAIWRSIQEQGSIGNPVCGNFMPVTEPSPRERQP-------- 272

Query: 109 TTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFY 168
             VP A     S      GG  CA+AA+AE Q           +   PVF+M        
Sbjct: 273 -FVPAA-----SLEIPHGGGFSCAVAAMAEHQPPSMDFSYMAGSSAFPVFDMFRRPCNIA 332

Query: 169 NRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAG 228
                N+E+ P     I                 P C   + R  GE + D+ SE  EAG
Sbjct: 333 GGSMCNLESSPESWSGI----------------APSCSREVVREEGECSADHWSEGAEAG 392

Query: 229 TSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTG 288
           TSY  SD   D G    +P +   +     P    P++ EEQMM +MA+SLA+  G +  
Sbjct: 393 TSYAGSDIVADAG---TMPQLPFAENFAMAPSHFRPESIEEQMMFSMALSLADGHGRTHS 424

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BLAST of CmoCh04G006980 vs. ExPASy Swiss-Prot
Match: Q93YV5 (E3 ubiquitin-protein ligase DA2 OS=Arabidopsis thaliana OX=3702 GN=DA2 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-16
Identity = 75/236 (31.78%), Postives = 114/236 (48.31%), Query Frame = 0


Query: 49  RNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGR-YVS--PTTV 108
           R  R+DE ++DLE++MVMEAIWLS+QE G  ++    E  SS QY T+   YVS  P   
Sbjct: 201 RGNREDEVDVDLEELMVMEAIWLSVQETGTQRNSASGEITSSRQYVTDNHSYVSSPPRVT 260

Query: 109 PLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRM 168
           P+   ++ SSS   SGGL CA++ALAE+Q +G                    ++   +  
Sbjct: 261 PIVEPATPSSS---SGGLSCAISALAERQMVGE-------------------SSSHNHNH 320

Query: 169 NTNVENYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSY 228
           N NV +Y    +  N ++Y   +  ++ +           N        +  E  +  SY
Sbjct: 321 NVNVSSYS--MLPGNCDSYYDIEQEVDGID----------NHHHHRHHYEMGETGSSNSY 380

Query: 229 PTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVST 282
            +S  T +   +   P           P+ I+P++FEEQMM+AMAVS+AE    +T
Sbjct: 381 VSSYMTGEGFHNFPPP----------PPLVIVPESFEEQMMMAMAVSMAEVHATTT 392

[Close]

BLAST of CmoCh04G006980 vs. ExPASy Swiss-Prot
Match: Q940G8 (E3 ubiquitin-protein ligase DA2L OS=Arabidopsis thaliana OX=3702 GN=DA2L PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.1e-11
Identity = 51/123 (41.46%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 52  RDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTS 111
           RD +F+ DLEDIMVMEAIWLS+QE G  ++       S D    + R   P+T       
Sbjct: 201 RDGQFDFDLEDIMVMEAIWLSMQEPGIQRN------TSPDDISEKDRNEEPST------- 260

Query: 112 SSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLP--GATEFYNRMNTNV 171
              SSSSPSGGL CA+A LAE+QQ+  G  S+  N +    N++P  G    YN +  + 
Sbjct: 261 --PSSSSPSGGLACAIAVLAERQQM-VGVSSSNQNVNLASQNLVPDNGNNSHYNAIEQDS 307

Query: 172 ENY 173
            +Y
Sbjct: 321 NHY 307

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BLAST of CmoCh04G006980 vs. ExPASy TrEMBL
Match: A0A6J1FPN0 (uncharacterized protein LOC111447344 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447344 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 7.7e-134
Identity = 250/275 (90.91%), Postives = 252/275 (91.64%), Query Frame = 0


Query: 21  PISDEDKFGLLFSCGNYI------YMLESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQ 80
           P  DE+   L  SC   I        + SN    RNFRDDEFELDLEDIMVMEAIWLSIQ
Sbjct: 179 PSEDEEIVSLQDSCMTPIRPPPPPIPIRSN----RNFRDDEFELDLEDIMVMEAIWLSIQ 238

Query: 81  EKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQ 140
           EKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQ
Sbjct: 239 EKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQ 298

Query: 141 QIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTV 200
           QIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTV
Sbjct: 299 QIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTV 358

Query: 201 PIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPI 260
           PIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPI
Sbjct: 359 PIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPI 418

Query: 261 PIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           PIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ
Sbjct: 419 PIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 449

[Close]

BLAST of CmoCh04G006980 vs. ExPASy TrEMBL
Match: A0A6J1FQQ3 (uncharacterized protein LOC111447344 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447344 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133
Identity = 247/269 (91.82%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 21  PISDEDKFGLLFSCGNYIYMLESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQ 80
           P  DE+   L  SC   I       +P R+ RDDEFELDLEDIMVMEAIWLSIQEKGRHQ
Sbjct: 179 PSEDEEIVSLQDSCMTPI-RPPPPPIPIRSNRDDEFELDLEDIMVMEAIWLSIQEKGRHQ 238

Query: 81  DPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGP 140
           DPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGP
Sbjct: 239 DPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGP 298

Query: 141 LSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCR 200
           LSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCR
Sbjct: 299 LSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCR 358

Query: 201 MILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQN 260
           MILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQN
Sbjct: 359 MILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQN 418

Query: 261 FEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           FEEQMMLAMAVSLAEARGVSTGPGHSWQQ
Sbjct: 419 FEEQMMLAMAVSLAEARGVSTGPGHSWQQ 446

[Close]

BLAST of CmoCh04G006980 vs. ExPASy TrEMBL
Match: A0A6J1IXT2 (uncharacterized protein LOC111480127 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480127 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.1e-123
Identity = 240/295 (81.36%), Postives = 251/295 (85.08%), Query Frame = 0


Query: 3   THQNGKNPASIGGLREGPPISDEDKFGLLFSCGNYI------YMLESNNVPFRNFRDDEF 62
           T ++G++ ++   L + P   DE+   L  SC   I        + SN    RNFRDDEF
Sbjct: 162 TAEDGEDSSAAVPLSQSPS-EDEEIVSLQDSCMTPIRPPPPPIPIRSN----RNFRDDEF 221

Query: 63  ELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSS 122
           ELDLEDIMVMEAIWLSIQEKGRHQDPVYTE  SSDQY TEGRYVSPTTVPLAGT SSSSS
Sbjct: 222 ELDLEDIMVMEAIWLSIQEKGRHQDPVYTEDTSSDQYATEGRYVSPTTVPLAGT-SSSSS 281

Query: 123 SSPSGGLVCAMAALAE--QQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPP 182
           SSPSGGL CAMAALAE  QQQIGRGPLSTCANGDSPVFNM P ATEFYNRMNTNVENYPP
Sbjct: 282 SSPSGGLACAMAALAEQQQQQIGRGPLSTCANGDSPVFNMHPEATEFYNRMNTNVENYPP 341

Query: 183 LQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDN 242
           LQISINTENYTPAQLSINT+PIPDCRMILTRN  EWNLDNQSEEDEAGTSYPTSDSTEDN
Sbjct: 342 LQISINTENYTPAQLSINTIPIPDCRMILTRNDEEWNLDNQSEEDEAGTSYPTSDSTEDN 401

Query: 243 GIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           GIDCALPTVH IDGGNQTPIPI+PQNFEEQMMLAMAVSL EARGVSTGPGHSWQQ
Sbjct: 402 GIDCALPTVHTIDGGNQTPIPIIPQNFEEQMMLAMAVSLTEARGVSTGPGHSWQQ 450

[Close]

BLAST of CmoCh04G006980 vs. ExPASy TrEMBL
Match: A0A6J1J0L3 (uncharacterized protein LOC111480127 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480127 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 4.7e-123
Identity = 237/289 (82.01%), Postives = 249/289 (86.16%), Query Frame = 0


Query: 3   THQNGKNPASIGGLREGPPISDEDKFGLLFSCGNYIYMLESNNVPFRNFRDDEFELDLED 62
           T ++G++ ++   L + P   DE+   L  SC   I       +P R+ RDDEFELDLED
Sbjct: 162 TAEDGEDSSAAVPLSQSPS-EDEEIVSLQDSCMTPI-RPPPPPIPIRSNRDDEFELDLED 221

Query: 63  IMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGG 122
           IMVMEAIWLSIQEKGRHQDPVYTE  SSDQY TEGRYVSPTTVPLAGT SSSSSSSPSGG
Sbjct: 222 IMVMEAIWLSIQEKGRHQDPVYTEDTSSDQYATEGRYVSPTTVPLAGT-SSSSSSSPSGG 281

Query: 123 LVCAMAALAE--QQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISIN 182
           L CAMAALAE  QQQIGRGPLSTCANGDSPVFNM P ATEFYNRMNTNVENYPPLQISIN
Sbjct: 282 LACAMAALAEQQQQQIGRGPLSTCANGDSPVFNMHPEATEFYNRMNTNVENYPPLQISIN 341

Query: 183 TENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCAL 242
           TENYTPAQLSINT+PIPDCRMILTRN  EWNLDNQSEEDEAGTSYPTSDSTEDNGIDCAL
Sbjct: 342 TENYTPAQLSINTIPIPDCRMILTRNDEEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCAL 401

Query: 243 PTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           PTVH IDGGNQTPIPI+PQNFEEQMMLAMAVSL EARGVSTGPGHSWQQ
Sbjct: 402 PTVHTIDGGNQTPIPIIPQNFEEQMMLAMAVSLTEARGVSTGPGHSWQQ 447

[Close]

BLAST of CmoCh04G006980 vs. ExPASy TrEMBL
Match: A0A1S3BS99 (uncharacterized protein LOC103492971 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492971 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.1e-107
Identity = 214/295 (72.54%), Postives = 235/295 (79.66%), Query Frame = 0


Query: 3   THQNGK-NPASIGGLREGPPISDEDKFGLLFSCGNYI------YMLESNNVPFRNFRDDE 62
           T +NG+ NPA+    +   P  DE+   L   C   I        + SN    RNFRDDE
Sbjct: 162 TVENGEDNPAAAPSSQS--PAEDEEIVSLQDPCMTPIRPPPPPIPIRSN----RNFRDDE 221

Query: 63  FELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSS 122
           F+LDLEDIMVMEAIWLSIQEKGRH+DPVY EAASSDQY TEGRYVSP T+PLAGT     
Sbjct: 222 FDLDLEDIMVMEAIWLSIQEKGRHKDPVYAEAASSDQYATEGRYVSPATIPLAGT----- 281

Query: 123 SSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPL 182
           SSSPSGGL CA+AALAEQQQI RGP S C NGDSPVFNMLPGATEFYNRMNTNVENYPP 
Sbjct: 282 SSSPSGGLACAIAALAEQQQISRGPSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPT 341

Query: 183 QISINTENYTPAQLS-INTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDN 242
           Q+SI+ ENY PAQ+S ++TV  PDCRMILTRN GEWNLD+QSEE EAGTSYPTSDS EDN
Sbjct: 342 QVSISAENYAPAQVSAVDTV--PDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDSNEDN 401

Query: 243 GIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
             +CALPTV+A+DGGNQ  IPI+PQNFEEQMMLAMAVSLAEAR VSTGPGHSWQ+
Sbjct: 402 STECALPTVNAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 443

[Close]

BLAST of CmoCh04G006980 vs. NCBI nr
Match: KAG7031124.1 (SIP5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486.9 bits (1252), Expect = 1.2e-133
Identity = 245/251 (97.61%), Postives = 247/251 (98.41%), Query Frame = 0


Query: 41  LESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYV 100
           LESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYV
Sbjct: 211 LESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYV 270

Query: 101 SPTTVPLAGTSSSSSSSSPSGGLVCAMAALAE--QQQIGRGPLSTCANGDSPVFNMLPGA 160
           SPTTVPLAGT SSSSSSSPSGGLVCAMAALAE  QQQIGRGPLSTCANGDSPVFNMLPGA
Sbjct: 271 SPTTVPLAGT-SSSSSSSPSGGLVCAMAALAEQQQQQIGRGPLSTCANGDSPVFNMLPGA 330

Query: 161 TEFYNRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEE 220
           TEFYNRMNTNVENYPPLQISINTENYTPAQLSINT+P+PDCRMILTRN GEWNLDNQSEE
Sbjct: 331 TEFYNRMNTNVENYPPLQISINTENYTPAQLSINTIPMPDCRMILTRNSGEWNLDNQSEE 390

Query: 221 DEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARG 280
           DEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARG
Sbjct: 391 DEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARG 450

Query: 281 VSTGPGHSWQQ 290
           VSTGPGHSWQQ
Sbjct: 451 VSTGPGHSWQQ 460

[Close]

BLAST of CmoCh04G006980 vs. NCBI nr
Match: XP_022942226.1 (uncharacterized protein LOC111447344 isoform X1 [Cucurbita moschata] >XP_022942227.1 uncharacterized protein LOC111447344 isoform X1 [Cucurbita moschata] >XP_022942228.1 uncharacterized protein LOC111447344 isoform X1 [Cucurbita moschata] >XP_022942229.1 uncharacterized protein LOC111447344 isoform X1 [Cucurbita moschata] >XP_022942230.1 uncharacterized protein LOC111447344 isoform X1 [Cucurbita moschata] >XP_022942232.1 uncharacterized protein LOC111447344 isoform X1 [Cucurbita moschata] >XP_022942233.1 uncharacterized protein LOC111447344 isoform X1 [Cucurbita moschata])

HSP 1 Score: 486.5 bits (1251), Expect = 1.6e-133
Identity = 250/275 (90.91%), Postives = 252/275 (91.64%), Query Frame = 0


Query: 21  PISDEDKFGLLFSCGNYI------YMLESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQ 80
           P  DE+   L  SC   I        + SN    RNFRDDEFELDLEDIMVMEAIWLSIQ
Sbjct: 179 PSEDEEIVSLQDSCMTPIRPPPPPIPIRSN----RNFRDDEFELDLEDIMVMEAIWLSIQ 238

Query: 81  EKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQ 140
           EKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQ
Sbjct: 239 EKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQ 298

Query: 141 QIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTV 200
           QIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTV
Sbjct: 299 QIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTV 358

Query: 201 PIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPI 260
           PIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPI
Sbjct: 359 PIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPI 418

Query: 261 PIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           PIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ
Sbjct: 419 PIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 449

[Close]

BLAST of CmoCh04G006980 vs. NCBI nr
Match: XP_022942234.1 (uncharacterized protein LOC111447344 isoform X2 [Cucurbita moschata])

HSP 1 Score: 485.7 bits (1249), Expect = 2.7e-133
Identity = 247/269 (91.82%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 21  PISDEDKFGLLFSCGNYIYMLESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQ 80
           P  DE+   L  SC   I       +P R+ RDDEFELDLEDIMVMEAIWLSIQEKGRHQ
Sbjct: 179 PSEDEEIVSLQDSCMTPI-RPPPPPIPIRSNRDDEFELDLEDIMVMEAIWLSIQEKGRHQ 238

Query: 81  DPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGP 140
           DPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGP
Sbjct: 239 DPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGP 298

Query: 141 LSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCR 200
           LSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCR
Sbjct: 299 LSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTVPIPDCR 358

Query: 201 MILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQN 260
           MILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQN
Sbjct: 359 MILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQN 418

Query: 261 FEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           FEEQMMLAMAVSLAEARGVSTGPGHSWQQ
Sbjct: 419 FEEQMMLAMAVSLAEARGVSTGPGHSWQQ 446

[Close]

BLAST of CmoCh04G006980 vs. NCBI nr
Match: KAG6600482.1 (E3 ubiquitin-protein ligase DA2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 471.1 bits (1211), Expect = 6.9e-129
Identity = 243/271 (89.67%), Postives = 248/271 (91.51%), Query Frame = 0


Query: 21  PISDEDKFGLLFSCGNYIYMLESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQ 80
           P  DE+   L  SC   I       +P R+ RDDEFELDLEDIMVMEAIWLSIQEKGRHQ
Sbjct: 179 PSEDEEIVSLQDSCMTPI-RPPPPPIPIRSNRDDEFELDLEDIMVMEAIWLSIQEKGRHQ 238

Query: 81  DPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAE--QQQIGR 140
           DPVYTEAASSDQYPTEGRYVSPTTVPLAGT SSSSSSSPSGGLVCAMAALAE  QQQIGR
Sbjct: 239 DPVYTEAASSDQYPTEGRYVSPTTVPLAGT-SSSSSSSPSGGLVCAMAALAEQQQQQIGR 298

Query: 141 GPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTVPIPD 200
           GPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINT+P+PD
Sbjct: 299 GPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSINTIPMPD 358

Query: 201 CRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMP 260
           CRMILTRN GEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMP
Sbjct: 359 CRMILTRNSGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMP 418

Query: 261 QNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           QNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ
Sbjct: 419 QNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 447

[Close]

BLAST of CmoCh04G006980 vs. NCBI nr
Match: XP_023531192.1 (uncharacterized protein LOC111793511 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531201.1 uncharacterized protein LOC111793511 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.8 bits (1200), Expect = 1.3e-127
Identity = 244/277 (88.09%), Postives = 248/277 (89.53%), Query Frame = 0


Query: 21  PISDEDKFGLLFSCGNYI------YMLESNNVPFRNFRDDEFELDLEDIMVMEAIWLSIQ 80
           P  DE+   L  SC   I        + SN    RNFRDDEFELDLEDIMVMEAIWLSIQ
Sbjct: 179 PSEDEEIVSLQDSCMTPIRPPPPPIPIRSN----RNFRDDEFELDLEDIMVMEAIWLSIQ 238

Query: 81  EKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAE-- 140
           EKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGT  SSSSSSPSGGLVCAMAALAE  
Sbjct: 239 EKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGT--SSSSSSPSGGLVCAMAALAEQQ 298

Query: 141 QQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLSIN 200
           QQQIGRGPLSTCANGDSPVFNM PGATEFYNRMN NVENYPPLQISINTE+YTPAQLSIN
Sbjct: 299 QQQIGRGPLSTCANGDSPVFNMHPGATEFYNRMNINVENYPPLQISINTEDYTPAQLSIN 358

Query: 201 TVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQT 260
           T+PIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQT
Sbjct: 359 TIPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQT 418

Query: 261 PIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           PIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ
Sbjct: 419 PIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 449

[Close]

BLAST of CmoCh04G006980 vs. TAIR 10
Match: AT1G78420.1 (RING/U-box superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-17
Identity = 75/236 (31.78%), Postives = 114/236 (48.31%), Query Frame = 0


Query: 49  RNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGR-YVS--PTTV 108
           R  R+DE ++DLE++MVMEAIWLS+QE G  ++    E  SS QY T+   YVS  P   
Sbjct: 201 RGNREDEVDVDLEELMVMEAIWLSVQETGTQRNSASGEITSSRQYVTDNHSYVSSPPRVT 260

Query: 109 PLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRM 168
           P+   ++ SSS   SGGL CA++ALAE+Q +G                    ++   +  
Sbjct: 261 PIVEPATPSSS---SGGLSCAISALAERQMVGE-------------------SSSHNHNH 320

Query: 169 NTNVENYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSY 228
           N NV +Y    +  N ++Y   +  ++ +           N        +  E  +  SY
Sbjct: 321 NVNVSSYS--MLPGNCDSYYDIEQEVDGID----------NHHHHRHHYEMGETGSSNSY 380

Query: 229 PTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVST 282
            +S  T +   +   P           P+ I+P++FEEQMM+AMAVS+AE    +T
Sbjct: 381 VSSYMTGEGFHNFPPP----------PPLVIVPESFEEQMMMAMAVSMAEVHATTT 392

[Close]

BLAST of CmoCh04G006980 vs. TAIR 10
Match: AT1G78420.2 (RING/U-box superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-17
Identity = 75/236 (31.78%), Postives = 114/236 (48.31%), Query Frame = 0


Query: 49  RNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGR-YVS--PTTV 108
           R  R+DE ++DLE++MVMEAIWLS+QE G  ++    E  SS QY T+   YVS  P   
Sbjct: 201 RGNREDEVDVDLEELMVMEAIWLSVQETGTQRNSASGEITSSRQYVTDNHSYVSSPPRVT 260

Query: 109 PLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRM 168
           P+   ++ SSS   SGGL CA++ALAE+Q +G                    ++   +  
Sbjct: 261 PIVEPATPSSS---SGGLSCAISALAERQMVGE-------------------SSSHNHNH 320

Query: 169 NTNVENYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSY 228
           N NV +Y    +  N ++Y   +  ++ +           N        +  E  +  SY
Sbjct: 321 NVNVSSYS--MLPGNCDSYYDIEQEVDGID----------NHHHHRHHYEMGETGSSNSY 380

Query: 229 PTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVST 282
            +S  T +   +   P           P+ I+P++FEEQMM+AMAVS+AE    +T
Sbjct: 381 VSSYMTGEGFHNFPPP----------PPLVIVPESFEEQMMMAMAVSMAEVHATTT 392

[Close]

BLAST of CmoCh04G006980 vs. TAIR 10
Match: AT1G17145.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 4.3e-12
Identity = 51/123 (41.46%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 52  RDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTS 111
           RD +F+ DLEDIMVMEAIWLS+QE G  ++       S D    + R   P+T       
Sbjct: 201 RDGQFDFDLEDIMVMEAIWLSMQEPGIQRN------TSPDDISEKDRNEEPST------- 260

Query: 112 SSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLP--GATEFYNRMNTNV 171
              SSSSPSGGL CA+A LAE+QQ+  G  S+  N +    N++P  G    YN +  + 
Sbjct: 261 --PSSSSPSGGLACAIAVLAERQQM-VGVSSSNQNVNLASQNLVPDNGNNSHYNAIEQDS 307

Query: 172 ENY 173
            +Y
Sbjct: 321 NHY 307

The following BLAST results are available for this feature:

BLAST of CmoCh04G006980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4GWX9	5.2e-18	31.84	E3 ubiquitin-protein ligase GW2 OS=Oryza sativa subsp. indica OX=39946 GN=GW2 PE...	[more]
B9F4Q9	5.2e-18	31.84	E3 ubiquitin-protein ligase GW2 OS=Oryza sativa subsp. japonica OX=39947 GN=GW2 ...	[more]
Q93YV5	2.2e-16	31.78	E3 ubiquitin-protein ligase DA2 OS=Arabidopsis thaliana OX=3702 GN=DA2 PE=1 SV=1	[more]
Q940G8	6.1e-11	41.46	E3 ubiquitin-protein ligase DA2L OS=Arabidopsis thaliana OX=3702 GN=DA2L PE=2 SV...	[more]

BLAST of CmoCh04G006980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPN0	7.7e-134	90.91	uncharacterized protein LOC111447344 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FQQ3	1.3e-133	91.82	uncharacterized protein LOC111447344 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IXT2	2.1e-123	81.36	uncharacterized protein LOC111480127 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J0L3	4.7e-123	82.01	uncharacterized protein LOC111480127 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BS99	2.1e-107	72.54	uncharacterized protein LOC103492971 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CmoCh04G006980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031124.1	1.2e-133	97.61	SIP5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022942226.1	1.6e-133	90.91	uncharacterized protein LOC111447344 isoform X1 [Cucurbita moschata] >XP_0229422...	[more]
XP_022942234.1	2.7e-133	91.82	uncharacterized protein LOC111447344 isoform X2 [Cucurbita moschata]	[more]
KAG6600482.1	6.9e-129	89.67	E3 ubiquitin-protein ligase DA2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023531192.1	1.3e-127	88.09	uncharacterized protein LOC111793511 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of CmoCh04G006980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78420.1	1.5e-17	31.78	RING/U-box superfamily protein	[more]
AT1G78420.2	1.5e-17	31.78	RING/U-box superfamily protein	[more]
AT1G17145.1	4.3e-12	41.46	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..234
None	No IPR available	PANTHER	PTHR31315:SF12	E3 UBIQUITIN-PROTEIN LIGASE DA2	coord: 49..170
None	No IPR available	PANTHER	PTHR31315:SF12	E3 UBIQUITIN-PROTEIN LIGASE DA2	coord: 243..281
IPR039301	Protein Sip5/DA2	PANTHER	PTHR31315	PROTEIN SIP5	coord: 243..281 coord: 49..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G006980.1	CmoCh04G006980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0046620	regulation of organ growth
biological_process	GO:0080113	regulation of seed growth
molecular_function	GO:0061630	ubiquitin protein ligase activity