CmoCh04G006900 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTATATGGATGGAGACTTTTCCTTTTGAGTTTTCTCGTTCGGAGAGATTCACTCTAACCTCCTCCTCAAATCAGGACGTTTAGTTTTGTGTTAATATGATGTCGAAGTTTTTGAGATTGCAAGAAGATATTACAAACGAGCTGGTGTTCGGCACAAAGGAATTTTGTGTCAGATTCCATATCGGTTGGGGAGGAGAACAAAAGCTTCTTATGAAAATCTCCTTCTACAGTTTTAAGAATCTTGAGAAGAAGTTTAAAAGGGAAAATCTAGAGAGGACAATAGCTACTATCGTTGGCTAAGGTCGTTACAAATGGTACCCGAGTCAGACACTAGGCGAAGTGCCAGCGAGAAGGCTGAGCCTCAAATAGGGTGGACATGAGGTGGTGTGCTAGCAAGGACATCGGCCCAAAAGGGAATGGATTGGGGGGTCCTAGCTATCGGACAATGTGCTAGCGAGGAGGTTTAGCTTCAAATGGGAAGGAGAACGAAATATTCTCTATAAAGCGTAGAAACTTCTCCTAGCAGATGGGTTCTAAAAACTTTGAGGGAGAGCTGGAAAGGTAAAGTCGAAAGAGGATAATATTAAAATTGGAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGAAAAAAAAAAAAAAAAAAAAAAGTCAAAAGAGGACAATATCTACGTAGGGTCGACACTAGCGTTACATTTTGGCTCGTTCTATCATATTGTAATTGGTTGATTGAGGGAAACCTTGTGATTCTTCGTTTTTTTTTTGTAGATCAGAACCAGAGCAAGATGCAACAAACGAGCTCCGAATCTTATCGGAGCTGGAACAGATAAGGAGACTAATGGCGATGAATCTAATGACTTGCCAAAGTTTAATCAAACGACGCCGTGTGAACCTCTAGTGGCTATATCTGTAGCTGCGAGCCTTCTTCCCACCGGGCCGCCGTTCAGTGCGAGTTTTCAACTGGTTCCTTCTCAACAGGTACGTTTTCTTTCTGCGTTTTGATGTCTTCCCTCTTCGTTTAATCTGCAAAGCTTTAACATTCTCTCGCATGGCTTCGCGTCATCTCCGCATGCCCACCAGCTGTTTGTAGAAATTCCCAAGAGAGTATCTAATTTGTCGAGCTATAAAGTTAGTATACTATTGGGTTTCTGCTCCACCCTGCAGTGCATATCGTTCTTTGATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTATCATCTATGCCCCCAGTGGCTGCAATTGCCAGCTTTGGAACTATCAAAAGCGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTCGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGGTACAATGTTGTTGCTCATCTATATGTTTAAGTACTTTATGATCTGTCTGATTGTAATTGAATTCGTTGATTTAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTAACATTTTCGTTCATTTACCGTTTTCAAATGTACGCTTGAATGTGATGAACTTGTGTTCTAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGTAAGCCCCTTCCTCCCATTCTTACTGCTTAATAACAAGGTTTTGTTTTGAAGAGTGCTATTACTTTAGGGCTAACCATAGTTTTCTATATTCATTTAGGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCCATATATCTCGATGTTGCTAGAAAATATTTTGAACTTGCTGGTGTTTCTCACAAGGTAAGTACTTCTTCATTTGATGTTCTCTGGTTCTTCTTTTATCAAACGATTATGAACGGTGACATGAATCTTTTGAGAAATACTATCTTCCTATTTTTCTGCTGATAATCTGCAACTTTCATATTGTAAATAGCTCCTACATGATTTTGCAACCAATGTATTCTATTTGAACTGTAAACCGTTTGTAGCCAAATTTTTGGTTAGCTCTAGCTAGTATATTTCCTTTTTACTTACAGCATTGTATAACCAAAACTGATATCGTGAGATACCACGTTGATTGGAGAGGGGAACAAACGAACATTCTTTATAAGGGTGTGAAAATCTCTCCATAGCAGATACGTTTTAAAAACCTTGAGGGGAAAGCCCAAAGAGGATAATATCTGCTGACGGTGGGCTTGAGCTGTTACAAATGATATTAGAGCTAAACACCGGGTGGTGCGCCAGTGAGGACGCTGAGTCCTGAAAGAGGTGGACACCGGGCGGTGTGCCAGCGATGATGCTGAGCCCCGAAGAGGGGTGGATTGTGAGATCCCACGTCGATTGGAAAGGAGAATAAAACATTCTTTTTAAAGGTGTGAAGACCTCTCCCTAACAGACGTATTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAAGACATTATCGACTAGCGGTGAGGTTGGTCTGATACTCTAATTAATTAACCGGGAGATTTGAGAAAGGCCATTCATTTAATCAGATTCCTCAAATTTTAGACCAGCCATACAGTATACCCACTTATGGGTATACAAAGATCGATCAATTTCGTGTATTTATGTTCATAATTTTAAGCTATAACATGTTTCTGATGATCAAAACATGGTTTTGGACAATTTCTGGAAGTAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATCGCAAATGGTGAAGCTGGCAGGTGAAGTGTTTTATGTTATATCATGTTTTGATTCAAAAACTTGTTTCGTTGGTTGATGGAATGATCTTATAATACTTCTTTTAGATTTTGTTATAACTATCCCATTATGTTCTCTCTTTTACCTTCTTGGCGATTTAACATGACATCAAAGTTAAAAGGGTGAGCTTTAAACTTCTGTGATTTTACTTCCTCCGATGGCCTTTTTACAAAGATTGAATCGATAACATATTTTTGTGCACGTATAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGACGAAAAACAATTAGCTTCTGCTAAAAAATCTGTTTATGTCTAATGGTTTTATCAGATAGCCTATCTTTTCAGTCCATGATGTTTAAGTAAGTTCTTCACCGCCTTCATTCAGGTGAGAGTTGGAGGTATAATTGTGATTGATAATGTCCTTTGGTATGGAAAAGTAGCTGACCCAACGGTGCGTTAGCCTCGACATCTCGTGACATTGTCTCCATTTTAGCGTAGTTAACTGATGATCGTGGTCTTTGAGCAGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAACAAAAGGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTGAGCATTTGATCTATCTTCCCTCTGCTAGCCTCCTTGAACTATGATGATGGTACTAAACTTGGTTTATTTAGGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGAATGGTGCCTGCTGAACTTGAGGGCGTAGCATTAGCAAAACAGTGCATAAGTGAATTTGAGTTTACTTTTGTGGATAAATATATATTTTTTTTTCTTTTGTGAATGTATTTCTATAGGACGTTGGAATATTGGAATATAATGCCATGTGGTATGATCATATCTACTTA ATGTCTATATGGATGGAGACTTTTCCTTTTGAGTTTTCTCGTTCGGAGAGATTCACTCTAACCTCCTCCTCAAATCAGGACATCAGAACCAGAGCAAGATGCAACAAACGAGCTCCGAATCTTATCGGAGCTGGAACAGATAAGGAGACTAATGGCGATGAATCTAATGACTTGCCAAAGTTTAATCAAACGACGCCGTGTGAACCTCTAGTGGCTATATCTGTAGCTGCGAGCCTTCTTCCCACCGGGCCGCCGTTCAGTGCGAGTTTTCAACTGGTTCCTTCTCAACAGTTAGTATACTATTGGGTTTCTGCTCCACCCTGCAGTGCATATCGTTCTTTGATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTATCATCTATGCCCCCAGTGGCTGCAATTGCCAGCTTTGGAACTATCAAAAGCGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTCGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCCATATATCTCGATGTTGCTAGAAAATATTTTGAACTTGCTGGTGTTTCTCACAAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATCGCAAATGGTGAAGCTGGCAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGAGTTGGAGGTATAATTGTGATTGATAATGTCCTTTGGTATGGAAAAGTAGCTGACCCAACGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAACAAAAGGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGAATGGTGCCTGCTGAACTTGAGGGCGTAGCATTAGCAAAACAGTGCATAAGTGAATTTGAGTTTACTTTTGTGGATAAATATATATTTTTTTTTCTTTTGTGAATGTATTTCTATAGGACGTTGGAATATTGGAATATAATGCCATGTGGTATGATCATATCTACTTA ATGTCTATATGGATGGAGACTTTTCCTTTTGAGTTTTCTCGTTCGGAGAGATTCACTCTAACCTCCTCCTCAAATCAGGACATCAGAACCAGAGCAAGATGCAACAAACGAGCTCCGAATCTTATCGGAGCTGGAACAGATAAGGAGACTAATGGCGATGAATCTAATGACTTGCCAAAGTTTAATCAAACGACGCCGTGTGAACCTCTAGTGGCTATATCTGTAGCTGCGAGCCTTCTTCCCACCGGGCCGCCGTTCAGTGCGAGTTTTCAACTGGTTCCTTCTCAACAGTTAGTATACTATTGGGTTTCTGCTCCACCCTGCAGTGCATATCGTTCTTTGATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTATCATCTATGCCCCCAGTGGCTGCAATTGCCAGCTTTGGAACTATCAAAAGCGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTCGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCCATATATCTCGATGTTGCTAGAAAATATTTTGAACTTGCTGGTGTTTCTCACAAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATCGCAAATGGTGAAGCTGGCAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGAGTTGGAGGTATAATTGTGATTGATAATGTCCTTTGGTATGGAAAAGTAGCTGACCCAACGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAACAAAAGGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGA MSIWMETFPFEFSRSERFTLTSSSNQDIRTRARCNKRAPNLIGAGTDKETNGDESNDLPKFNQTTPCEPLVAISVAASLLPTGPPFSASFQLVPSQQLVYYWVSAPPCSAYRSLMMSSSNMGLRFLSYPQRNLLMKLSSMPPVAAIASFGTIKSAMACRRVRCHLNLDDSSSKKRQLERVRSANSNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLDVARKYFELAGVSHKVDVRHGLAADTLKSLIANGEAGSYDFAFIDAEKRMNEEYFELLLQLVRVGGIIVIDNVLWYGKVADPTVNDKQTDSIRRLNKRIMEDDRVGISIVPIGDGMTICQKR Homology
BLAST of CmoCh04G006900 vs. ExPASy Swiss-Prot
Match: Q9XGP7 (Tricin synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ROMT-15 PE=1 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.9e-44 Identity = 106/241 (43.98%), Postives = 149/241 (61.83%), Query Frame = 0
BLAST of CmoCh04G006900 vs. ExPASy Swiss-Prot
Match: Q86VU5 (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens OX=9606 GN=COMTD1 PE=1 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.2e-42 Identity = 93/211 (44.08%), Postives = 135/211 (63.98%), Query Frame = 0
BLAST of CmoCh04G006900 vs. ExPASy Swiss-Prot
Match: Q8BIG7 (Catechol O-methyltransferase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Comtd1 PE=1 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.2e-39 Identity = 88/211 (41.71%), Postives = 136/211 (64.45%), Query Frame = 0
BLAST of CmoCh04G006900 vs. ExPASy Swiss-Prot
Match: Q9XGD6 (Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays OX=4577 GN=CCOAOMT1 PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.5e-39 Identity = 100/244 (40.98%), Postives = 141/244 (57.79%), Query Frame = 0
BLAST of CmoCh04G006900 vs. ExPASy Swiss-Prot
Match: Q00719 (O-methyltransferase MdmC OS=Streptomyces mycarofaciens OX=1949 GN=mdmC PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.0e-39 Identity = 79/201 (39.30%), Postives = 131/201 (65.17%), Query Frame = 0
BLAST of CmoCh04G006900 vs. ExPASy TrEMBL
Match: A0A6J1FWM2 (uncharacterized protein LOC111447599 OS=Cucurbita moschata OX=3662 GN=LOC111447599 PE=3 SV=1) HSP 1 Score: 567.0 bits (1460), Expect = 6.4e-158 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of CmoCh04G006900 vs. ExPASy TrEMBL
Match: A0A6J1J482 (uncharacterized protein LOC111481091 OS=Cucurbita maxima OX=3661 GN=LOC111481091 PE=3 SV=1) HSP 1 Score: 556.6 bits (1433), Expect = 8.6e-155 Identity = 289/294 (98.30%), Postives = 291/294 (98.98%), Query Frame = 0
BLAST of CmoCh04G006900 vs. ExPASy TrEMBL
Match: A0A1S3BSA9 (O-methyltransferase MdmC-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492978 PE=3 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 1.1e-136 Identity = 258/312 (82.69%), Postives = 282/312 (90.38%), Query Frame = 0
BLAST of CmoCh04G006900 vs. ExPASy TrEMBL
Match: A0A0A0L0A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064680 PE=3 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 3.1e-128 Identity = 246/294 (83.67%), Postives = 263/294 (89.46%), Query Frame = 0
BLAST of CmoCh04G006900 vs. ExPASy TrEMBL
Match: A0A1S3BTG3 (O-methyltransferase MdmC-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492978 PE=3 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 5.3e-128 Identity = 245/298 (82.21%), Postives = 268/298 (89.93%), Query Frame = 0
BLAST of CmoCh04G006900 vs. NCBI nr
Match: KAG6600478.1 (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 648.7 bits (1672), Expect = 3.4e-182 Identity = 347/383 (90.60%), Postives = 350/383 (91.38%), Query Frame = 0
BLAST of CmoCh04G006900 vs. NCBI nr
Match: XP_022942615.1 (uncharacterized protein LOC111447599 [Cucurbita moschata]) HSP 1 Score: 567.0 bits (1460), Expect = 1.3e-157 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of CmoCh04G006900 vs. NCBI nr
Match: KAG7031120.1 (Tricin synthase 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 565.8 bits (1457), Expect = 2.9e-157 Identity = 293/294 (99.66%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of CmoCh04G006900 vs. NCBI nr
Match: XP_023528625.1 (uncharacterized protein LOC111791484 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 557.8 bits (1436), Expect = 8.0e-155 Identity = 288/294 (97.96%), Postives = 292/294 (99.32%), Query Frame = 0
BLAST of CmoCh04G006900 vs. NCBI nr
Match: XP_022982193.1 (uncharacterized protein LOC111481091 [Cucurbita maxima]) HSP 1 Score: 556.6 bits (1433), Expect = 1.8e-154 Identity = 289/294 (98.30%), Postives = 291/294 (98.98%), Query Frame = 0
BLAST of CmoCh04G006900 vs. TAIR 10
Match: AT3G62000.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 334.7 bits (857), Expect = 1.0e-91 Identity = 163/221 (73.76%), Postives = 199/221 (90.05%), Query Frame = 0
BLAST of CmoCh04G006900 vs. TAIR 10
Match: AT3G61990.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 315.5 bits (807), Expect = 6.4e-86 Identity = 160/221 (72.40%), Postives = 192/221 (86.88%), Query Frame = 0
BLAST of CmoCh04G006900 vs. TAIR 10
Match: AT3G62000.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 309.7 bits (792), Expect = 3.5e-84 Identity = 152/209 (72.73%), Postives = 187/209 (89.47%), Query Frame = 0
BLAST of CmoCh04G006900 vs. TAIR 10
Match: AT4G34050.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 161.0 bits (406), Expect = 2.0e-39 Identity = 88/217 (40.55%), Postives = 130/217 (59.91%), Query Frame = 0
BLAST of CmoCh04G006900 vs. TAIR 10
Match: AT4G26220.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 160.6 bits (405), Expect = 2.6e-39 Identity = 91/219 (41.55%), Postives = 129/219 (58.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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