CmoCh04G005870 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G005870
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	NAC domain-containing protein
Location	Cmo_Chr04: 2928153 .. 2930382 (-)
RNA-Seq Expression	CmoCh04G005870
Synteny	CmoCh04G005870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGCAGCGTCCACCGGAGCTCGAACAACGGGTACCTAGCGCCAGGGTTCCGGTTCCACCCGACCGACGAAGAGTTGATTGCTCATTACCTTTTGAAGAAGGTGTTAGACTCCCATTTCTCATCACCCGCCATAGCCTATGTCGACCTCAACAAGTCCGAGCCTTGGGACCTCCCTGGTCAGCTATTTTATTCTCTTTCTAGGCTTTTTCTTCCTAAATTTTCAATGATAAACAGTTATTTTTTTATTATTTATATTTTAACAGCAGAGTCGTCAAATCTTATAATAAGTTAATTATGAAATATAATAAAAACAATTTAAGGATGTGATCGTAAAATTTCAAAATTTAAAGCGTTAATGGTAGATAAAATAAAAGATTCAAAGGACGAGATTGCAATAAATTTTGGATGGTTTGTGCAAATTTTTTGAGAAAATATTTAAATTTTAAAAATAAAAATAAATTTTTAAAAATTATAGTTTCATTTTGTAGTCTATTTAATTTTTTTTCTTACTTTTTTTTATCATGATTTTTATCTAATTAATCAAATTTATTTTTTAAAAAAACTACTTTATTTTAGCTGCAATTCTAAAAATATTCGTAAAAATGAATAAATAAAAGTAATTATATATATATATATATATATATATATATTATTTTTTAATATAGTAATTAAAAAAAGAAAGTCTTACTAAGAGAGAGGAATTACAGAGAAAGCAGTAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCTACGAGACCGGAAGTACCCAACCGGCCTGAGAACGAACCGGGCGACGGAGGCCGGCTACTGGAAGGCCACCGGAAAAGACAGAGAAATAACCAGCTCTAAAACAAACTCCGTCGTCGGGATGAAGAAGACCCTCGTCTTTTACACCGGCAGAGCTCCTAAAGGCCAAAAAACCCACTGGGTTATGCATGAGTTTCATCTCGCCGGAAAATTCGCCTACCATTTTCTCTCCGCCGCCTCTTCCAAGGTTCCTCTCTTTTCCTCTCTCTCTCTCTCCTTTGTTTTTGGTTGAACACGACGGCGGCCACCAGTCGCCGTCGACGTTGATCCTTAAATTAATTATTTTAATATATATATTAATAAATAATGTTATAGTAGGTGAAATAATTAAAGATTTATTATATATATTATAAATATTTCAGTACATTTATTATAATTTATACACATTATTTCGATGGAGGACCAATTTCAATGGAGAGGTTTTAATATTTTGGGAATAATAATAATTTCATAAATGAAATTTATGTTTATGTCCCTTCTCATTTATTTTGGTATCCGTCCCCGAACAAGGTGGGAAATCTCCGTTTAAATGGAGAGCGAGGGAGGGAGTGAAGAGAAAATTTTTTTCTTTAGCTAAATGGGAGCGGGGATGAGGATTATTTCTTATCCCCATCCTTGATCTCGATCCCAATTCCCGCCCCAATAGCCATTTATTAGTGGTTTTTTCATTTTTTTTAATAGATAATTTTGTGAAAATGAAGAATGAAATAGGAGGCAAAGAAGAAATTAGGTGTTCATATTATAAAGTTTGGCATCACATTTATTAACGTAAACTTTACTAAATAGTAACGCTCATGTAAAATATCATTCATGATTTTCGAACCTTATATTAAATATTAAAATGTTGCGACTATATGGTTGCCTTAGAATTAATGTTGTAACTATATATATATATATATAATAAATATGAAACGCAGGATGAATGGGTGATATCCAGAGTTTTCAAGAAAACCAGCGCCGCCATGCACGGCGGCGTGATGAAGAAAACTCGCGGTGATCCCGAACCCACTTCCCCTTCCTCGGTGTCTCTGCCTCCTCTTCTCGATTCATCTCCCTACCTCTCTGCTGCTGCTGATACCAGTATCAGCACCTCCGCCTTCGCCAACCGCGACGGCAGCTCTCTCGACGACCAAAGGGAGCACCAGCTGCACGTGACCTGTTTCTCCACCAACAACCTGAGCTACCCCGCTGCAAGCTTCCCGGCTGGTGGTGGTCATAATCTCTCCGTCTCGGCCTTCCCGAACCTTCGGAGCATCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCTGTGAGTCCGCCGCTGGTTCATCTCCTCTCCGGTGCCGCTGACGTGGATGGGTGCGGTGGTGCTCCGTCGCCGGAGGATTCGAGGACTATGGGTTCCGCCGATTTGGGTGCGTATATGTGGACCTTCTGA

mRNA sequence

ATGGACAGCAGCGTCCACCGGAGCTCGAACAACGGGTACCTAGCGCCAGGGTTCCGGTTCCACCCGACCGACGAAGAGTTGATTGCTCATTACCTTTTGAAGAAGGTGTTAGACTCCCATTTCTCATCACCCGCCATAGCCTATGTCGACCTCAACAAGTCCGAGCCTTGGGACCTCCCTGAGAAAGCAGTAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCTACGAGACCGGAAGTACCCAACCGGCCTGAGAACGAACCGGGCGACGGAGGCCGGCTACTGGAAGGCCACCGGAAAAGACAGAGAAATAACCAGCTCTAAAACAAACTCCGTCGTCGGGATGAAGAAGACCCTCGTCTTTTACACCGGCAGAGCTCCTAAAGGCCAAAAAACCCACTGGGTTATGCATGAGTTTCATCTCGCCGGAAAATTCGCCTACCATTTTCTCTCCGCCGCCTCTTCCAAGGATGAATGGGTGATATCCAGAGTTTTCAAGAAAACCAGCGCCGCCATGCACGGCGGCGTGATGAAGAAAACTCGCGGTGATCCCGAACCCACTTCCCCTTCCTCGGTGTCTCTGCCTCCTCTTCTCGATTCATCTCCCTACCTCTCTGCTGCTGCTGATACCAGTATCAGCACCTCCGCCTTCGCCAACCGCGACGGCAGCTCTCTCGACGACCAAAGGGAGCACCAGCTGCACGTGACCTGTTTCTCCACCAACAACCTGAGCTACCCCGCTGCAAGCTTCCCGGCTGGTGGTGGTCATAATCTCTCCGTCTCGGCCTTCCCGAACCTTCGGAGCATCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCTGTGAGTCCGCCGCTGGTTCATCTCCTCTCCGGTGCCGCTGACGTGGATGGGTGCGGTGGTGCTCCGTCGCCGGAGGATTCGAGGACTATGGGTTCCGCCGATTTGGGTGCGTATATGTGGACCTTCTGA

Coding sequence (CDS)

ATGGACAGCAGCGTCCACCGGAGCTCGAACAACGGGTACCTAGCGCCAGGGTTCCGGTTCCACCCGACCGACGAAGAGTTGATTGCTCATTACCTTTTGAAGAAGGTGTTAGACTCCCATTTCTCATCACCCGCCATAGCCTATGTCGACCTCAACAAGTCCGAGCCTTGGGACCTCCCTGAGAAAGCAGTAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCTACGAGACCGGAAGTACCCAACCGGCCTGAGAACGAACCGGGCGACGGAGGCCGGCTACTGGAAGGCCACCGGAAAAGACAGAGAAATAACCAGCTCTAAAACAAACTCCGTCGTCGGGATGAAGAAGACCCTCGTCTTTTACACCGGCAGAGCTCCTAAAGGCCAAAAAACCCACTGGGTTATGCATGAGTTTCATCTCGCCGGAAAATTCGCCTACCATTTTCTCTCCGCCGCCTCTTCCAAGGATGAATGGGTGATATCCAGAGTTTTCAAGAAAACCAGCGCCGCCATGCACGGCGGCGTGATGAAGAAAACTCGCGGTGATCCCGAACCCACTTCCCCTTCCTCGGTGTCTCTGCCTCCTCTTCTCGATTCATCTCCCTACCTCTCTGCTGCTGCTGATACCAGTATCAGCACCTCCGCCTTCGCCAACCGCGACGGCAGCTCTCTCGACGACCAAAGGGAGCACCAGCTGCACGTGACCTGTTTCTCCACCAACAACCTGAGCTACCCCGCTGCAAGCTTCCCGGCTGGTGGTGGTCATAATCTCTCCGTCTCGGCCTTCCCGAACCTTCGGAGCATCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCTGTGAGTCCGCCGCTGGTTCATCTCCTCTCCGGTGCCGCTGACGTGGATGGGTGCGGTGGTGCTCCGTCGCCGGAGGATTCGAGGACTATGGGTTCCGCCGATTTGGGTGCGTATATGTGGACCTTCTGA

Protein sequence

MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGAPSPEDSRTMGSADLGAYMWTF

Homology

[Close]

BLAST of CmoCh04G005870 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.9e-77
Identity = 177/345 (51.30%), Postives = 203/345 (58.84%), Query Frame = 0


Query: 13  YLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEKEWYF 72
           YL PGFRFHPTDEELI HYLL+KVLD  FSS AIA VDLNK EPW LP +A MGEKEWYF
Sbjct: 16  YLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 75

Query: 73  FSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKT 132
           FSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT ++VGMKKTLVFY GRAPKG+K+
Sbjct: 76  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 135

Query: 133 HWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHG------------------ 192
           +WVMHE+ L GKF+YHF+S  SSKDEWVISRVF+KT+ A  G                  
Sbjct: 136 NWVMHEYRLEGKFSYHFIS-RSSKDEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSG 195

Query: 193 -GVMKKTR--------GDPEPTSPSSVSLPPLLD----------SSPYLSAAADTSISTS 252
            G  KKT+           +P+SPSSVSLPPLLD          S  Y S + +T+++ S
Sbjct: 196 TGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSCSYDSRSTNTTVTAS 255

Query: 253 AFANRDGSSLDDQREHQLHVTCFST-------------------NNLSYPAASFPAGGGH 301
           A                 HV+CFST                     L +    FP     
Sbjct: 256 AITE--------------HVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDFDPFPRFVSR 315

[Close]

BLAST of CmoCh04G005870 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 5.5e-69
Identity = 139/244 (56.97%), Postives = 172/244 (70.49%), Query Frame = 0


Query: 7   RSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMG 66
           R  +   + PGFRFHPTDEELI +YLLKKVLDS+FS  AI+ VDLNKSEPW+LPEKA MG
Sbjct: 13  RFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMG 72

Query: 67  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRA 126
           EKEWYFF+LRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT S++GMKKTLVFY GRA
Sbjct: 73  EKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRA 132

Query: 127 PKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRGDPEP 186
           PKG+K+ WVMHE+ L GKF+YH++S +S+KDEWV+ +V  K+      GV+ +       
Sbjct: 133 PKGEKSCWVMHEYRLDGKFSYHYIS-SSAKDEWVLCKVCLKS------GVVSRETNLISS 192

Query: 187 TSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYP 246
           +S S+V       +  + SA +  +   + FA               HV+CFS N+ ++ 
Sbjct: 193 SSSSAV-------TGEFSSAGSAIAPIINTFATE-------------HVSCFSNNSAAHT 229

Query: 247 AASF 251
            ASF
Sbjct: 253 DASF 229

[Close]

BLAST of CmoCh04G005870 vs. ExPASy Swiss-Prot
Match: Q9FLJ2 (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.4e-64
Identity = 142/263 (53.99%), Postives = 172/263 (65.40%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL KKVLD+ FS+ AI  VDLNKSEPW+LP  A MGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKGQKT+
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 134 WVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRGDPEPTSPSSVS 193
           WVMHE+ L GKF+ H L   ++K+EWVI RVF+K++      +    R     T  +   
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSAGGKKIPISSLIRIGSLGTDFNPSL 195

Query: 194 LPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPAASFPAG 253
           LP L DSSPY        +    F+N+      DQ +    + CFS+  L+    S  A 
Sbjct: 196 LPSLTDSSPYNDKTKTEPVYVPCFSNQ-----TDQNQGTT-LNCFSSPVLN----SIQAD 255

Query: 254 GGHNLSVSAFPNLRSIQENLQAP 277
             H + +    +L+ +  NLQ+P
Sbjct: 256 IFHRIPLYQTQSLQ-VSMNLQSP 264

[Close]

BLAST of CmoCh04G005870 vs. ExPASy Swiss-Prot
Match: Q9FLR3 (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.6e-63
Identity = 143/268 (53.36%), Postives = 166/268 (61.94%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL KKVLD  FS+ AI  VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKGQKT+
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 136

Query: 134 WVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRGDPEPTSPSSVS 193
           WVMHE+ L GK + H L   ++K+EWVI RVF KT+      +    R     T     S
Sbjct: 137 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGS---S 196

Query: 194 LPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPAASF--- 253
           LPPL DSSPY        +    F+N+              + CFS  +LS     F   
Sbjct: 197 LPPLTDSSPYNDKTKTEPVYVPCFSNQ-------AETRGTILNCFSNPSLSSIQPDFLQM 256

Query: 254 ---PAGGGHNLSVSAFPNLRSIQENLQA 276
                    N+S S+ P L   Q  LQA
Sbjct: 257 IPLYQPQSLNISESSNPVLTQEQSVLQA 271

[Close]

BLAST of CmoCh04G005870 vs. ExPASy Swiss-Prot
Match: Q9LJW3 (NAC domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=NAC59 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.5e-61
Identity = 139/256 (54.30%), Postives = 168/256 (65.62%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL  KV++S FS+ AI  VDLNK EPWDLP KA +GEKEWYFF
Sbjct: 24  LPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLPWKAKLGEKEWYFF 83

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKG KT+
Sbjct: 84  CVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGK--SLVGMKKTLVFYKGRAPKGVKTN 143

Query: 134 WVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRGDPEPTSPSSVS 193
           WVMHE+ L GKFA   LS  ++K+E VISRVF             +T G  E     SV 
Sbjct: 144 WVMHEYRLEGKFAIDNLS-KTAKNECVISRVFH-----------TRTDGTKE---HMSVG 203

Query: 194 LPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPAASFPAG 253
           LPPL+DSSPYL +    S++        G++L     H  + +  +T++ S   A F   
Sbjct: 204 LPPLMDSSPYLKSRGQDSLA--------GTTLGGLLSHVTYFSDQTTDDKSL-VADFKTT 253

Query: 254 GGHNLSVSAFPNLRSI 270
              + S +  PN+ S+
Sbjct: 264 MFGSGSTNFLPNIGSL 253

[Close]

BLAST of CmoCh04G005870 vs. ExPASy TrEMBL
Match: A0A6J1FVE0 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC111447202 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 3.7e-185
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60
           MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP
Sbjct: 1   MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
           EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV
Sbjct: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120

Query: 121 FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180
           FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT
Sbjct: 121 FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180

Query: 181 RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 240
           RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST
Sbjct: 181 RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 240

Query: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300
           NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG
Sbjct: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300

Query: 301 APSPEDSRTMGSADLGAYMWTF 323
           APSPEDSRTMGSADLGAYMWTF
Sbjct: 301 APSPEDSRTMGSADLGAYMWTF 322

[Close]

BLAST of CmoCh04G005870 vs. ExPASy TrEMBL
Match: A0A6J1E4T0 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430609 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.6e-130
Identity = 238/315 (75.56%), Postives = 259/315 (82.22%), Query Frame = 0


Query: 9   SNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEK 68
           S++G+L PGFRFHPTDEELIAHYLLKKVLDSHFSSPAIA+VDLNKSEPWDLPEKA+MGEK
Sbjct: 12  SSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEK 71

Query: 69  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPK 128
           EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKTNS++GMKKTLVFY GRAPK
Sbjct: 72  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPK 131

Query: 129 GQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGG-VMKKTRGDPEPT 188
           GQKT+WVMHEF LAGKFAYHFLSA SSKDEWVIS+VFKKT AAMHGG   +KTR DPEP+
Sbjct: 132 GQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTRLDPEPS 191

Query: 189 SPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPA 248
           SPS VSLPPLLDSS                         D  EH+LHVTCFSTNN++Y  
Sbjct: 192 SPSLVSLPPLLDSSA------------------------DPSEHELHVTCFSTNNVNY-- 251

Query: 249 ASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGAPSPEDS 308
              PAGGG +LS S FPNL S QENLQAPFFSPV PPLVHLL+ AA++ GCG  P+PEDS
Sbjct: 252 ---PAGGGSDLSPSVFPNLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDS 297

Query: 309 RTMGSADLGAYMWTF 323
           R +GSAD+  YMWTF
Sbjct: 312 RLVGSADMATYMWTF 297

[Close]

BLAST of CmoCh04G005870 vs. ExPASy TrEMBL
Match: A0A6J1JAG2 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482723 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.9e-129
Identity = 237/315 (75.24%), Postives = 259/315 (82.22%), Query Frame = 0


Query: 9   SNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEK 68
           +++G+L PGFRFHPTDEELIAHYLLKKVLDSHFSSPAIA+VDLNKSEPWDLPEKA+MGEK
Sbjct: 12  NSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEK 71

Query: 69  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPK 128
           EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKTNS++GMKKTLVFY GRAPK
Sbjct: 72  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPK 131

Query: 129 GQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGG-VMKKTRGDPEPT 188
           GQKT+WVMHEF LAGKFAYHFLSA SSKDEWVIS+VFKKT AAMHGG   KK R DPEP+
Sbjct: 132 GQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTKKIRLDPEPS 191

Query: 189 SPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPA 248
           SPSSVSLPP LDSS                         D  E++LHVTCFSTNN++Y  
Sbjct: 192 SPSSVSLPPRLDSSA------------------------DPSENELHVTCFSTNNVNY-- 251

Query: 249 ASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGAPSPEDS 308
              PAGGG +LS S FPNL S QENLQAPFFSPV PPLVHLL+ AA++ GCG  P+PEDS
Sbjct: 252 ---PAGGGSDLSPSVFPNLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDS 297

Query: 309 RTMGSADLGAYMWTF 323
           R +GSAD+ AYMWTF
Sbjct: 312 RLVGSADMAAYMWTF 297

[Close]

BLAST of CmoCh04G005870 vs. ExPASy TrEMBL
Match: A0A1S3C1U0 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.9e-126
Identity = 242/322 (75.16%), Postives = 270/322 (83.85%), Query Frame = 0


Query: 9   SNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEK 68
           S++GYL PGFRFHPTDEELI HYLLKKVL+SHFSSPAIA+VDLNKSEPWDLPEKA+MGEK
Sbjct: 10  SSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKALMGEK 69

Query: 69  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPK 128
           EWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREI SSKTNS++GMKKTLVFY GRAPK
Sbjct: 70  EWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPK 129

Query: 129 GQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKT----SAAMHGGVMKKT-RGD 188
           GQK++WVMHEF LAGKF+YHFLSAA+SKDEWVISRVFKKT     AAMHGG MKKT R +
Sbjct: 130 GQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGAAMHGGAMKKTARPN 189

Query: 189 PEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNL 248
           PEP+SPSSVSLPPLLDSSPY SAAAD ++S++A+A  DG   DD REH+LHVTCFSTNNL
Sbjct: 190 PEPSSPSSVSLPPLLDSSPYTSAAADATVSSAAYA--DG---DDTREHELHVTCFSTNNL 249

Query: 249 SYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPF-FSPVSPPLVHLLSGAADVDGCGGAP 308
           +Y +           S SAFP   S QENLQAPF  SPV P LVHL++GAA++DGCGG P
Sbjct: 250 NYCS-----------SASAFP---SFQENLQAPFLISPVGPSLVHLVAGAANLDGCGGGP 307

Query: 309 SPEDSRTMGSADLGA--YMWTF 323
           +PE     GSAD+ A  YMW F
Sbjct: 310 TPE-----GSADVNASGYMWRF 307

[Close]

BLAST of CmoCh04G005870 vs. ExPASy TrEMBL
Match: A0A6J1CNU6 (protein CUP-SHAPED COTYLEDON 2-like OS=Momordica charantia OX=3673 GN=LOC111012816 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 8.9e-123
Identity = 237/325 (72.92%), Postives = 259/325 (79.69%), Query Frame = 0


Query: 6   HRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVM 65
           HR S++ YL PGFRFHPTDEELIAHYLLKKVLDSHFSSPAIA VDLNKSEPWDLPEKA M
Sbjct: 8   HRRSDS-YLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAQVDLNKSEPWDLPEKASM 67

Query: 66  GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGR 125
           GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT S + MKKTLVFYTGR
Sbjct: 68  GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREILSSKTRSTLAMKKTLVFYTGR 127

Query: 126 APKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKT----SAAMHGGVMKKTR 185
           APKGQKT+WVMHEF LAGKFAYHFL AASSKDEWVISRVFKK+     AA+ GG MKK++
Sbjct: 128 APKGQKTNWVMHEFRLAGKFAYHFLFAASSKDEWVISRVFKKSGSGAGAALCGGAMKKSQ 187

Query: 186 GDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTN 245
            +PEP+SPSSVSLPPLLDSSPY SA         AF  RDG SLDD REH+LHVTCFSTN
Sbjct: 188 LNPEPSSPSSVSLPPLLDSSPYPSA---------AFTERDGCSLDDPREHELHVTCFSTN 247

Query: 246 NLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSP----PLVHLLSGAADVDG 305
           N +   A FP+GGG + S S FP       +LQ+PFFS V+P    PL HLL+G  D DG
Sbjct: 248 N-NLAGAGFPSGGGLDFSTSGFP-------SLQSPFFSTVAPAPLQPLTHLLAGGTDFDG 307

Query: 306 CGGAPSPEDSRTMGSADLGAYMWTF 323
           CGG  + E+SR +G AD+ A  WTF
Sbjct: 308 CGGGTAAEESRPIGFADM-ADTWTF 313

[Close]

BLAST of CmoCh04G005870 vs. NCBI nr
Match: XP_022942010.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata])

HSP 1 Score: 657.1 bits (1694), Expect = 7.6e-185
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60
           MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP
Sbjct: 1   MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
           EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV
Sbjct: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120

Query: 121 FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180
           FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT
Sbjct: 121 FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180

Query: 181 RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 240
           RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST
Sbjct: 181 RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 240

Query: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300
           NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG
Sbjct: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300

Query: 301 APSPEDSRTMGSADLGAYMWTF 323
           APSPEDSRTMGSADLGAYMWTF
Sbjct: 301 APSPEDSRTMGSADLGAYMWTF 322

[Close]

BLAST of CmoCh04G005870 vs. NCBI nr
Match: KAG7031044.1 (Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 642.1 bits (1655), Expect = 2.5e-180
Identity = 315/322 (97.83%), Postives = 316/322 (98.14%), Query Frame = 0


Query: 1   MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60
           MD SVHRSSN GYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAI YVDLNKSEPWDLP
Sbjct: 1   MDGSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLP 60

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
           EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV
Sbjct: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120

Query: 121 FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180
           FYTGRAPKGQKTHWVMHEF LAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT
Sbjct: 121 FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180

Query: 181 RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 240
           R DPEPTSPSSVSLPPLLDSSPYL AAADTSISTSAFANRDGSSLDDQREH+LHVTCFST
Sbjct: 181 RRDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFST 240

Query: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300
           NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG
Sbjct: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300

Query: 301 APSPEDSRTMGSADLGAYMWTF 323
           APSPEDSRTMGSADLGAYMWTF
Sbjct: 301 APSPEDSRTMGSADLGAYMWTF 322

[Close]

BLAST of CmoCh04G005870 vs. NCBI nr
Match: XP_023543274.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 641.3 bits (1653), Expect = 4.3e-180
Identity = 315/322 (97.83%), Postives = 318/322 (98.76%), Query Frame = 0


Query: 1   MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60
           MD SVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP
Sbjct: 1   MDGSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
           EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV
Sbjct: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120

Query: 121 FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180
           FYTGRAPKGQKTHWVMHEF LAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT
Sbjct: 121 FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180

Query: 181 RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 240
           R DPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANR+GSSLDDQREH+LHVTCFST
Sbjct: 181 RRDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANREGSSLDDQREHELHVTCFST 240

Query: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300
           NNLSYPAASFPAGGG NLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG
Sbjct: 241 NNLSYPAASFPAGGGPNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300

Query: 301 APSPEDSRTMGSADLGAYMWTF 323
           APSPEDSRT+GSADLGAYMWTF
Sbjct: 301 APSPEDSRTIGSADLGAYMWTF 322

[Close]

BLAST of CmoCh04G005870 vs. NCBI nr
Match: KAG6600382.1 (Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 607.4 bits (1565), Expect = 6.9e-170
Identity = 303/322 (94.10%), Postives = 306/322 (95.03%), Query Frame = 0


Query: 1   MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60
           MD SVHRSSN GYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAI YVDLNKSEPWDLP
Sbjct: 1   MDGSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLP 60

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
                G+  +   SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV
Sbjct: 61  -----GQLFYSLSSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120

Query: 121 FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180
           FYTGRAPKGQKTHWVMHEF LAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT
Sbjct: 121 FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180

Query: 181 RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 240
           R DPEPTSPSSVSLPPLLDSSPYL AAADTSISTSAFANRDGSSLDDQREH+LHVTCFST
Sbjct: 181 RRDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFST 240

Query: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300
           NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG
Sbjct: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300

Query: 301 APSPEDSRTMGSADLGAYMWTF 323
           APSPEDSRTMGSADLGAYMWTF
Sbjct: 301 APSPEDSRTMGSADLGAYMWTF 317

[Close]

BLAST of CmoCh04G005870 vs. NCBI nr
Match: KAG6577005.1 (Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 476.9 bits (1226), Expect = 1.4e-130
Identity = 239/315 (75.87%), Postives = 261/315 (82.86%), Query Frame = 0


Query: 9   SNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEK 68
           S++G+L PGFRFHPTDEELIAHYLLKKVLDSHFSSPAIA+VDLNKSEPWDLPEKA+MGEK
Sbjct: 12  SSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEK 71

Query: 69  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPK 128
           EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKTNS++GMKKTLVFY GRAPK
Sbjct: 72  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPK 131

Query: 129 GQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGG-VMKKTRGDPEPT 188
           GQKT+WVMHEF LAGKFAYHFLSA SSKDEWVIS+VFKKT AAMHGG   +KTR DPEP+
Sbjct: 132 GQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGPSTRKTRLDPEPS 191

Query: 189 SPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPA 248
           SPSSVSLPPLLDSS                         D  EH+LHVTCFSTNN++Y  
Sbjct: 192 SPSSVSLPPLLDSSA------------------------DPSEHELHVTCFSTNNVNY-- 251

Query: 249 ASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGAPSPEDS 308
              PAGGG +LS S FP+L S QENLQAPFFSPV PPLVHLL+ AA++ GCG  P+PEDS
Sbjct: 252 ---PAGGGSDLSPSVFPSLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDS 297

Query: 309 RTMGSADLGAYMWTF 323
           R +GSAD+ AYMWTF
Sbjct: 312 RLVGSADMAAYMWTF 297

[Close]

BLAST of CmoCh04G005870 vs. TAIR 10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 290.8 bits (743), Expect = 1.3e-78
Identity = 177/345 (51.30%), Postives = 203/345 (58.84%), Query Frame = 0


Query: 13  YLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEKEWYF 72
           YL PGFRFHPTDEELI HYLL+KVLD  FSS AIA VDLNK EPW LP +A MGEKEWYF
Sbjct: 16  YLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 75

Query: 73  FSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKT 132
           FSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT ++VGMKKTLVFY GRAPKG+K+
Sbjct: 76  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 135

Query: 133 HWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHG------------------ 192
           +WVMHE+ L GKF+YHF+S  SSKDEWVISRVF+KT+ A  G                  
Sbjct: 136 NWVMHEYRLEGKFSYHFIS-RSSKDEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSG 195

Query: 193 -GVMKKTR--------GDPEPTSPSSVSLPPLLD----------SSPYLSAAADTSISTS 252
            G  KKT+           +P+SPSSVSLPPLLD          S  Y S + +T+++ S
Sbjct: 196 TGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSCSYDSRSTNTTVTAS 255

Query: 253 AFANRDGSSLDDQREHQLHVTCFST-------------------NNLSYPAASFPAGGGH 301
           A                 HV+CFST                     L +    FP     
Sbjct: 256 AITE--------------HVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDFDPFPRFVSR 315

[Close]

BLAST of CmoCh04G005870 vs. TAIR 10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.9e-70
Identity = 139/244 (56.97%), Postives = 172/244 (70.49%), Query Frame = 0


Query: 7   RSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMG 66
           R  +   + PGFRFHPTDEELI +YLLKKVLDS+FS  AI+ VDLNKSEPW+LPEKA MG
Sbjct: 13  RFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMG 72

Query: 67  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRA 126
           EKEWYFF+LRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT S++GMKKTLVFY GRA
Sbjct: 73  EKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRA 132

Query: 127 PKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRGDPEP 186
           PKG+K+ WVMHE+ L GKF+YH++S +S+KDEWV+ +V  K+      GV+ +       
Sbjct: 133 PKGEKSCWVMHEYRLDGKFSYHYIS-SSAKDEWVLCKVCLKS------GVVSRETNLISS 192

Query: 187 TSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYP 246
           +S S+V       +  + SA +  +   + FA               HV+CFS N+ ++ 
Sbjct: 193 SSSSAV-------TGEFSSAGSAIAPIINTFATE-------------HVSCFSNNSAAHT 229

Query: 247 AASF 251
            ASF
Sbjct: 253 DASF 229

[Close]

BLAST of CmoCh04G005870 vs. TAIR 10
Match: AT5G61430.1 (NAC domain containing protein 100 )

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-65
Identity = 142/263 (53.99%), Postives = 172/263 (65.40%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL KKVLD+ FS+ AI  VDLNKSEPW+LP  A MGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKGQKT+
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 134 WVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRGDPEPTSPSSVS 193
           WVMHE+ L GKF+ H L   ++K+EWVI RVF+K++      +    R     T  +   
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSAGGKKIPISSLIRIGSLGTDFNPSL 195

Query: 194 LPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPAASFPAG 253
           LP L DSSPY        +    F+N+      DQ +    + CFS+  L+    S  A 
Sbjct: 196 LPSLTDSSPYNDKTKTEPVYVPCFSNQ-----TDQNQGTT-LNCFSSPVLN----SIQAD 255

Query: 254 GGHNLSVSAFPNLRSIQENLQAP 277
             H + +    +L+ +  NLQ+P
Sbjct: 256 IFHRIPLYQTQSLQ-VSMNLQSP 264

[Close]

BLAST of CmoCh04G005870 vs. TAIR 10
Match: AT5G07680.1 (NAC domain containing protein 80 )

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-64
Identity = 143/268 (53.36%), Postives = 166/268 (61.94%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL KKVLD  FS+ AI  VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKGQKT+
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 136

Query: 134 WVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRGDPEPTSPSSVS 193
           WVMHE+ L GK + H L   ++K+EWVI RVF KT+      +    R     T     S
Sbjct: 137 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGS---S 196

Query: 194 LPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPAASF--- 253
           LPPL DSSPY        +    F+N+              + CFS  +LS     F   
Sbjct: 197 LPPLTDSSPYNDKTKTEPVYVPCFSNQ-------AETRGTILNCFSNPSLSSIQPDFLQM 256

Query: 254 ---PAGGGHNLSVSAFPNLRSIQENLQA 276
                    N+S S+ P L   Q  LQA
Sbjct: 257 IPLYQPQSLNISESSNPVLTQEQSVLQA 271

[Close]

BLAST of CmoCh04G005870 vs. TAIR 10
Match: AT5G07680.2 (NAC domain containing protein 80 )

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-64
Identity = 143/268 (53.36%), Postives = 166/268 (61.94%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL KKVLD  FS+ AI  VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 3   LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 62

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKGQKT+
Sbjct: 63  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 122

Query: 134 WVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRGDPEPTSPSSVS 193
           WVMHE+ L GK + H L   ++K+EWVI RVF KT+      +    R     T     S
Sbjct: 123 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGS---S 182

Query: 194 LPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPAASF--- 253
           LPPL DSSPY        +    F+N+              + CFS  +LS     F   
Sbjct: 183 LPPLTDSSPYNDKTKTEPVYVPCFSNQ-------AETRGTILNCFSNPSLSSIQPDFLQM 242

Query: 254 ---PAGGGHNLSVSAFPNLRSIQENLQA 276
                    N+S S+ P L   Q  LQA
Sbjct: 243 IPLYQPQSLNISESSNPVLTQEQSVLQA 257

The following BLAST results are available for this feature:

BLAST of CmoCh04G005870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04017	1.9e-77	51.30	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
Q9FRV4	5.5e-69	56.97	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
Q9FLJ2	2.4e-64	53.99	NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2...	[more]
Q9FLR3	2.6e-63	53.36	NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 ...	[more]
Q9LJW3	2.5e-61	54.30	NAC domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=NAC59 PE=1 S...	[more]

BLAST of CmoCh04G005870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVE0	3.7e-185	100.00	protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC11144720...	[more]
A0A6J1E4T0	2.6e-130	75.56	protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC11143060...	[more]
A0A6J1JAG2	2.9e-129	75.24	protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482723 ...	[more]
A0A1S3C1U0	3.9e-126	75.16	protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4...	[more]
A0A6J1CNU6	8.9e-123	72.92	protein CUP-SHAPED COTYLEDON 2-like OS=Momordica charantia OX=3673 GN=LOC1110128...	[more]

BLAST of CmoCh04G005870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942010.1	7.6e-185	100.00	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata]	[more]
KAG7031044.1	2.5e-180	97.83	Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023543274.1	4.3e-180	97.83	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6600382.1	6.9e-170	94.10	Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6577005.1	1.4e-130	75.87	Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh04G005870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53950.1	1.3e-78	51.30	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15170.1	3.9e-70	56.97	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G61430.1	1.7e-65	53.99	NAC domain containing protein 100	[more]
AT5G07680.1	1.9e-64	53.36	NAC domain containing protein 80	[more]
AT5G07680.2	1.9e-64	53.36	NAC domain containing protein 80	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 16..141 e-value: 1.4E-39 score: 136.0
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 14..167 score: 57.802216
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 23..171 e-value: 4.0E-57 score: 194.3
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 10..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..197
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 248..304
None	No IPR available	PANTHER	PTHR31744:SF131	PROTEIN CUP-SHAPED COTYLEDON 2-LIKE	coord: 248..304
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 10..241
None	No IPR available	PANTHER	PTHR31744:SF131	PROTEIN CUP-SHAPED COTYLEDON 2-LIKE	coord: 10..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G005870.1	CmoCh04G005870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding