CmoCh04G003310 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G003310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	EF-hand domain-containing protein
Location	Cmo_Chr04: 1619475 .. 1623685 (+)
RNA-Seq Expression	CmoCh04G003310
Synteny	CmoCh04G003310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGTTCGCTCAGAGGTGAATAATGTGTTGGAATTTTTCGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAACAGAATTTGTAAGCTCTAATTTTCTACGTTATGTGTTCTTATTGATCATTGTGTTATTTATTGATCTGATCTATTGGAATTCCATGGCGAATTGTTGCGTTCGTTCTTAATGTCAGAGGCAGAATCGGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTTGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGGTATCTGTTCGTTAGGTCTTTAAATCGAGATAAACTAAATACTGGTGTTCTTATTCGTTCCCGTTCAGTTGGCATGCGTTGTTTTTTTGGGTTGAATTATCTAGAAATTATGATCTAGCTTGTTGGAGTTCTAGATTATTGGTTGTGATGAAACAGTGAAGCTTTTCAATATCATTTTTGTTATAGCGAGTAGCAACGAGATTATTGCAAATGCATGTCAGATTTTTCATCATGCAGCAATGAACTTCCAGTTTTCAATGCATTAGAATTTGATAATGATAGGCCCCTTGCGTTCTCGTTCTCTTTGGCCAAAATTTTATGTTGTGCTTTCTTTGGAAATTTGTTCACGCTGGGTATACATTGTTTAATTTGTAACAAATGCACTTACCAAGTTCACAAAACAGAAAAAGACAAGATCGACACCAAAGTTCCATGACTTTGGATCCTCTAACCTATTTTCCCATATCCTTTTTGGAAAATCATTCTCTTTTTGGTTAGTTGGATTTGAACATGGATACTGTGAGATCCCACGTCGGTTGAAGAGGGAAACAAAGAATTCTTTATAAGGGTGTAGAAATCTCTCTCTAGTAGATACGTTTTAAAACCTTGAGGGAAGCCCAAAGAAGACAACATTTGCTAGCTGTAGACTTGAAATTTTACAAATGGTATTGAGCTAGATACCGGGCGGTGTGCCAACAGGGACGATGGGCCTCCAAGGGGGGTGAATTGTGAGATCTTACATCCAATGGAAGAGGAACGAAGGGTGTGGAAACATCTCCCTAGTAGACGCGTTTTAAAACCTTGAGAGTAAGTCCAAAGAAGACAATATTAGCGAGCGGTGTGTTTGGGTGGTTACAGATACTATGATTTTATAGCCACAGGGACAGACAAGGTTGACTCTGTAGTTAATATTTGGATAGTGCTAGGCTTTCAGTTCTTAATGTGTTAGGATTGGGAACGGTAGTCCGTTGTATATTTTCCATCTTTAAATCCAATGTTTCCTGTTTAATGGTAGCTTTTGCTTTGCTTGTTTGTATAAAATTTAATGTAGAAGTAATTTTTCATTATCTTCTTCTTTTTGGTCACATAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGTTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAATGATGAAAAGTTGTCTGTACTTGGGTTTGAGGTATGCCATTTATCTTAGCTGCTCTATTTCAAAGGGTTTAGTTTATTGCAATTAATGGTTTAATGGCCGTTGCATGCCTTATTATCTTCTCTCAAATTTGCTTTACTCTGTATAATTGATTTTGAATCCGAAAGTATTCATCAACTAAATAGCTATGCAGTCATGCTACTATGGTTACTGCTGTTCTTATTTATTTTAATTGTTGTCTGTAACTTTTACTTGCCACAAGATCCTATTTACTTCTTAAGTAGAGAATGCATCAATGGGAGGTAGACAGTTAAGGCACCTCATGAGACCTGTTCATCTTTTACAGAACCAAAATTCGATGGCTAATCAGTGTAATCTATGGATTTTCTTCAGCGGTTCTGTTGTTAAGATGATAGCTAACATCATATCTAGTCAGATTTGCAGTACTATGGAGGTTCATTCTTTGTGCTACTTTGTTGTCAATCTATCTTTTTTCTTCTTCACATCTTGTATTTTGTAAAGTTAGATGGAAGAATAATTGTTCCTCTTCGTATTAAAATCAAAATATTGTTAATTAAGTCATAATTCCATTGTTCATCACCGAACAGATAATATAGATAAATATTTGAGCTACTTTGAAACTGTGCTTTAAATACCGTCTTCTATTTTTCAAAACATTTAATGGGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTTCTCATGATAGTGTGGAAACCTCTCCCTCGCGTTTTAGAATCTTGAAGGGAAGCTCGGAAGGGAAAGCCCAAAGAAAATAATATCTGTTAGCGGTGAGCTTTGACTGTTATAAATGGTATCAGAGCCAGGCACACCGGCGGTGTGCTAGCGAGGATGCTGGGCCCCCAATGGGGTGGATTGTGAGATCCACGTCGGTTGAAGAAGGGAACAAAGCATTCCTTATAAGGGTGTGAAAACATCTCTCTAACAGACGCGTTTTAAAACCTTGAGGGGAAGCTCGAAAGGGACTACTAGCAGTGGGCTTAGGCTGTTACATTCGAATAGTGCCGAATAGGTGAAAACTATTATCCTTTGGAGAGAAAGATAGATGCTTTCCAACTGGTTGTTTAATAGAGCATGCTACTTTTATCTTGATTGGATTCATTTCATTTTGTGTACTGTTGTGGACAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAGTACATCACTCATTTTTTGTTACAATTATCCACCAATTCTACACATTCAAATTATTCAAAGAATTAGGTTCATTTGAACAACTATTTCCTTTCCTTTTTCTCTTTTCTAAAAGCTATACCAAAATTAGAATACAAATAAATAGCCCAAGCCCATATATATACACATAGAGAGAGGGAGATATGTACAATCCAGATGTTTTTTATTTTGGATTATTGAAATTAGAATACAAATAAGAGGCATGTTGTTTGAAGGGTAACGTTGAGAAGAACCAAGAGGCATGAGTTCCTCTCAAACTGGAGGAAGCCTAAGCCTAAGCCTAAGGTCAGGCGGGTGGCCGTCCTTTTACTCCCATTCGCCTGCAAACCAAACCCAACAAATATTAACTCGCTTAAAATCAATAGATATATGCTAGGAAAAAATTTTCACACCCTCATAAAAAATGTTTCATTCTCTTCTCAAAATGGCGTGGGATCTCACAAAAGTCCAGTAAGAAATTTGAACACAACTCGATATCATTGCTATGTTAAAGTTGATCTTCGAAAAAATTCACCTGTTATGAATTGGGTCGGGTCCTTTAGGGACTTTAACTTTGCTCATGAAGTTAAGCTCCTTGGCTTGCTTCATATGGCTTCCCTCAAACTCAGACCTAGCTGCCGGCCAGCTTGTTGTTTTCGCCATCGACCGTTCTCCGCTGTCGGGCATGCCAACGATTAAAAGCCATACAAACATCCCAACAGCCACAGCTCCAAGCAAGACCTTGAAGTAAGAAAATGAGCAACAACTACCTTCACTTCTCATAAATATATATATATATATATATACTTCTGTCTATGTACGTCGAGAGAGATTAGTTAACTTTACGACTCGAGAGGTAAAGATGACAACGGCGATAGGTCGAAGTATGTTATCTTAAGTAGCGTCAAGCAATGAGAAGAAGAAGAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGGAGAAGGAGAGGAGTTTGTTTAGAAAAGGGGAGTGCATGTTTAATTAGGGAGTTGTCTTTTTTTTCTTTATAGGGTTGGTGGATTCTGTTGCACTTTTCTCAAACCCTGCCTTGCCTGTTTGTTTATTATTGACACACACACACACACCATTATATTCTAACATGTCATATTAATTTACATCTAATATTATTCCTATTACATTAACTCCAATGCTTGTGTGTGAAGAA

mRNA sequence

GAGGTTCGCTCAGAGGTGAATAATGTGTTGGAATTTTTCGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAACAGAATTTAGGCAGAATCGGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTTGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGTTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAATGATGAAAAGTTGTCTGTACTTGGGTTTGAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAGTACATCACTCATTTTTTGTTACAATTATCCACCAATTCTACACATTCAAATTATTCAAAGAATTAGGTTCATTTGAACAACTATTTCCTTTCCTTTTTCTCTTTTCTAAAAGCTATACCAAAATTAGAATACAAATAAATAGCCCAAGCCCATATATATACACATAGAGAGAGGGAGATATGTACAATCCAGATGTTTTTTATTTTGGATTATTGAAATTAGAATACAAATAAGAGGCATGTTGTTTGAAGGGTAACGTTGAGAAGAACCAAGAGGCATGAGTTCCTCTCAAACTGGAGGAAGCCTAAGCCTAAGCCTAAGGTCAGGCGGGTGGCCGTCCTTTTACTCCCATTCGCCTGCAAACCAAACCCAACAAATATTAACTCGCTTAAAATCAATAGATATATGCTAGGAAAAAATTTTCACACCCTCATAAAAAATGTTTCATTCTCTTCTCAAAATGGCGTGGGATCTCACAAAAGTCCAGTAAGAAATTTGAACACAACTCGATATCATTGCTATGTTAAAGTTGATCTTCGAAAAAATTCACCTGTTATGAATTGGGTCGGGTCCTTTAGGGACTTTAACTTTGCTCATGAAGTTAAGCTCCTTGGCTTGCTTCATATGGCTTCCCTCAAACTCAGACCTAGCTGCCGGCCAGCTTGTTGTTTTCGCCATCGACCGTTCTCCGCTGTCGGGCATGCCAACGATTAAAAGCCATACAAACATCCCAACAGCCACAGCTCCAAGCAAGACCTTGAAGTAAGAAAATGAGCAACAACTACCTTCACTTCTCATAAATATATATATATATATATATACTTCTGTCTATGTACGTCGAGAGAGATTAGTTAACTTTACGACTCGAGAGGTAAAGATGACAACGGCGATAGGTCGAAGTATGTTATCTTAAGTAGCGTCAAGCAATGAGAAGAAGAAGAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGGAGAAGGAGAGGAGTTTGTTTAGAAAAGGGGAGTGCATGTTTAATTAGGGAGTTGTCTTTTTTTTCTTTATAGGGTTGGTGGATTCTGTTGCACTTTTCTCAAACCCTGCCTTGCCTGTTTGTTTATTATTGACACACACACACACACCATTATATTCTAACATGTCATATTAATTTACATCTAATATTATTCCTATTACATTAACTCCAATGCTTGTGTGTGAAGAA

Coding sequence (CDS)

ATGTGTTGGAATTTTTCGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAACAGAATTTAGGCAGAATCGGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTTGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGTTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAATGATGAAAAGTTGTCTGTACTTGGGTTTGAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAG

Protein sequence

MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF

Homology

[Close]

BLAST of CmoCh04G003310 vs. ExPASy TrEMBL
Match: A0A6J1FS78 (uncharacterized protein LOC111447964 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447964 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.0e-118
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60
           MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60

Query: 61  CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120
           CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE
Sbjct: 61  CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120

Query: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGI 180
           HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGI
Sbjct: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGI 180

Query: 181 VLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           VLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 VLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 216

[Close]

BLAST of CmoCh04G003310 vs. ExPASy TrEMBL
Match: A0A6J1JRR0 (uncharacterized protein LOC111489192 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489192 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.7e-114
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQ-QNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNFSLHHFLLLLFCFSASLDAQ QNL RIGRNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQWQNLDRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSEKKDENYGCSETGYRI LKCVEVKDTSKVSNEK SHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRISLKCVEVKDTSKVSNEKISHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           IV+G+LLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 IVVGMLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217

[Close]

BLAST of CmoCh04G003310 vs. ExPASy TrEMBL
Match: A0A6J1FXF7 (uncharacterized protein LOC111447964 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447964 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.6e-113
Identity = 216/252 (85.71%), Postives = 216/252 (85.71%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60
           MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60

Query: 61  CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120
           CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE
Sbjct: 61  CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120

Query: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGF--- 180
           HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGF   
Sbjct: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFENQ 180

Query: 181 ---------------------------------EGIVLGLLLISGSVVYFRRKRSVSTAG 217
                                            EGIVLGLLLISGSVVYFRRKRSVSTAG
Sbjct: 181 NSMANQCNLWIFFSGSVVKMIANIISSQICSTMEGIVLGLLLISGSVVYFRRKRSVSTAG 240

[Close]

BLAST of CmoCh04G003310 vs. ExPASy TrEMBL
Match: A0A6J1JVB3 (uncharacterized protein LOC111489192 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489192 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.1e-112
Identity = 210/217 (96.77%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQ-QNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNFSLHHFLLLLFCFSASLDAQ QNL RIGRNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQWQNLDRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSE KDENYGCSETGYRI LKCVEVKDTSKVSNEK SHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSE-KDENYGCSETGYRISLKCVEVKDTSKVSNEKISHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           IV+G+LLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 IVVGMLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 216

[Close]

BLAST of CmoCh04G003310 vs. ExPASy TrEMBL
Match: A0A6J1FQX3 (uncharacterized protein LOC111447964 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447964 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.3e-111
Identity = 215/252 (85.32%), Postives = 215/252 (85.32%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60
           MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60

Query: 61  CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120
           CSRSGPCVACLLSE KDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE
Sbjct: 61  CSRSGPCVACLLSE-KDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120

Query: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGF--- 180
           HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGF   
Sbjct: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFENQ 180

Query: 181 ---------------------------------EGIVLGLLLISGSVVYFRRKRSVSTAG 217
                                            EGIVLGLLLISGSVVYFRRKRSVSTAG
Sbjct: 181 NSMANQCNLWIFFSGSVVKMIANIISSQICSTMEGIVLGLLLISGSVVYFRRKRSVSTAG 240

[Close]

BLAST of CmoCh04G003310 vs. NCBI nr
Match: XP_022943147.1 (uncharacterized protein LOC111447964 isoform X3 [Cucurbita moschata])

HSP 1 Score: 434.9 bits (1117), Expect = 4.1e-118
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60
           MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60

Query: 61  CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120
           CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE
Sbjct: 61  CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120

Query: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGI 180
           HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGI
Sbjct: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGI 180

Query: 181 VLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           VLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 VLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 216

[Close]

BLAST of CmoCh04G003310 vs. NCBI nr
Match: XP_023518468.1 (uncharacterized protein LOC111781939 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.6 bits (1098), Expect = 6.6e-116
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQ-QNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNF LHHFLLLLFCFSASLDAQ QNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFWLHHFLLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217

[Close]

BLAST of CmoCh04G003310 vs. NCBI nr
Match: KAG7030818.1 (hypothetical protein SDJN02_04855, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115
Identity = 214/217 (98.62%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQ-QNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNFSLHHFLLLLFCFSASLDAQ QNLGRI RNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGT GSQDYIIYRSCIPSVNDEKLSVLGFEG
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217

[Close]

BLAST of CmoCh04G003310 vs. NCBI nr
Match: XP_022993067.1 (uncharacterized protein LOC111489192 isoform X1 [Cucurbita maxima])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQ-QNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNFSLHHFLLLLFCFSASLDAQ QNL RIGRNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQWQNLDRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSEKKDENYGCSETGYRI LKCVEVKDTSKVSNEK SHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRISLKCVEVKDTSKVSNEKISHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           IV+G+LLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 IVVGMLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217

[Close]

BLAST of CmoCh04G003310 vs. NCBI nr
Match: XP_022943145.1 (uncharacterized protein LOC111447964 isoform X1 [Cucurbita moschata])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 216/252 (85.71%), Postives = 216/252 (85.71%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60
           MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFD 60

Query: 61  CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120
           CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE
Sbjct: 61  CSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYE 120

Query: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGF--- 180
           HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGF   
Sbjct: 121 HKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFENQ 180

Query: 181 ---------------------------------EGIVLGLLLISGSVVYFRRKRSVSTAG 217
                                            EGIVLGLLLISGSVVYFRRKRSVSTAG
Sbjct: 181 NSMANQCNLWIFFSGSVVKMIANIISSQICSTMEGIVLGLLLISGSVVYFRRKRSVSTAG 240

[Close]

BLAST of CmoCh04G003310 vs. TAIR 10
Match: AT1G69980.1 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 155.2 bits (391), Expect = 5.9e-38
Identity = 93/215 (43.26%), Postives = 128/215 (59.53%), Query Frame = 0


Query: 6   SLHHFLLLLFCFSASLDAQQNLGRIGRNEETEI-GFGRRALLSFKESPHGSNVTFDCSRS 65
           SL   +  +F +++S+ +         + + EI   GRR LL FKE+P GSN+TF CS S
Sbjct: 7   SLFLVIFFIFIYASSIPSSILARAHEHDGDEEIRSVGRRFLLGFKETPKGSNITFACSPS 66

Query: 66  GPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLV 125
           GPCV+C  SEK+ E Y CSETGYRIP KC EV++  +V   KK+ +              
Sbjct: 67  GPCVSCNSSEKRKEKYRCSETGYRIPFKCKEVRE--EVDAHKKNGE-------------- 126

Query: 126 NHLQSDASDHASSVAHRHQ--RDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVL 185
              Q+D S++    A       D S +  V SQ Y  YRSC+PS ++EKLSVLGFE I+L
Sbjct: 127 EETQNDQSNNNDEEAKTRNLLDDSSPATKVKSQSYKTYRSCVPSADEEKLSVLGFESIML 186

Query: 186 GLLLISGSVVYFRRKRSVSTAGF-ASGRVQSNSRF 217
           GL L+SG+ +Y R++++V   G  +SGR+Q NSRF
Sbjct: 187 GLFLLSGAAIYIRKRQTVPMLGVSSSGRLQGNSRF 205

The following BLAST results are available for this feature:

BLAST of CmoCh04G003310 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G003310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FS78	2.0e-118	100.00	uncharacterized protein LOC111447964 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JRR0	8.7e-114	97.24	uncharacterized protein LOC111489192 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FXF7	5.6e-113	85.71	uncharacterized protein LOC111447964 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JVB3	8.1e-112	96.77	uncharacterized protein LOC111489192 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FQX3	5.3e-111	85.32	uncharacterized protein LOC111447964 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh04G003310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943147.1	4.1e-118	100.00	uncharacterized protein LOC111447964 isoform X3 [Cucurbita moschata]	[more]
XP_023518468.1	6.6e-116	99.08	uncharacterized protein LOC111781939 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
KAG7030818.1	2.5e-115	98.62	hypothetical protein SDJN02_04855, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022993067.1	1.8e-113	97.24	uncharacterized protein LOC111489192 isoform X1 [Cucurbita maxima]	[more]
XP_022943145.1	1.2e-112	85.71	uncharacterized protein LOC111447964 isoform X1 [Cucurbita moschata]	[more]

BLAST of CmoCh04G003310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69980.1	5.9e-38	43.26	unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structu...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36336	OS09G0560400 PROTEIN	coord: 10..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G003310.1	CmoCh04G003310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane