CmoCh04G002200 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCAAAGTAGGGTTTCTTTACTTTATGCCTTTCTCTCTCTAGATTCTAATTTGTTAGCCATGCATGGTGCTGTGGCTAGAGAGAGAAATTATAATATAAATTAAGCTTTTTAGTGGGTCTTTGAGGTGAGAGAAGGAATATTATTATTAACTAATTAATTAATTAATTAAAATATGAATAAATAAAAAGAAGATGAACAAAAATAAAAAAGGTGATGGGTGGAGGGAATACTCTGGGTGGAAGTGTCGCAATCGAATGTACCTTTGTTTCCACTATTACCCTTCTTTTGTTTTCTTCTTAATTATATTCTTTTATTATTTTCACTTTTTTCTTAATACTTCTTAATTAAGAAAACAAAATTAAAAATACATTTATTTCCAATAATTTATTTTCATAACGTTTGAGTATATTTTATTTATTTATTTTTAGTTTAGTGAAACTTNAACCAATACAATCTACGAGACGCAATTGCACGGTGTACCACTCAGGTAAAACCAAGCTCTAGTTTTCATTTACTTTACAACCATTTGTGAAGCATGAGGAAGAAAGATGAAGCTGTTGTTCATGGCAGGTGTATCCGAAGTCATGGACTGCAATATATGTGGCGCTGGACAACGTGGGAATGTGGAATTTAAGGTCGGAATTCTGGGCAAGGCAGTACCTGGGTCAACAGTTTTACTTGAGAGTTTACACGCCATCGACTTCATTGAGAGACGAGTACCCAATTCCAAAGAATGCTCTGCTCTGTGGAAGAGCCACTGGGAGACGAACCAGGCCACTCTAGGCTCTATCCTCTGAGCTCAACACAATCAAATGATTTGTCATGTCGTATCATATCATATTTAGTTCTTCTGGGAAGGATATTC ATGGCCACCAAAGTAGGTTTAGTGAAACTTNAACCAATACAATCTACGAGACGCAATTGCACGGTGTACCACTCAGGTGTATCCGAAGTCATGGACTGCAATATATGTGGCGCTGGACAACGTGGGAATGTGGAATTTAAGGTCGGAATTCTGGGCAAGGCAGTACCTGGGTCAACAGTTTTACTTGAGAGTTTACACGCCATCGACTTCATTGAGAGACGAGTACCCAATTCCAAAGAATGCTCTGCTCTGTGGAAGAGCCACTGGGAGACGAACCAGGCCACTCTAGGCTCTATCCTCTGAGCTCAACACAATCAAATGATTTGTCATGTCGTATCATATCATATTTAGTTCTTCTGGGAAGGATATTC ATGGCCACCAAAGTAGGTTTAGTGAAACTTNAACCAATACAATCTACGAGACGCAATTGCACGGTGTACCACTCAGGTGTATCCGAAGTCATGGACTGCAATATATGTGGCGCTGGACAACGTGGGAATGTGGAATTTAAGGTCGGAATTCTGGGCAAGGCAGTACCTGGGTCAACAGTTTTACTTGAGAGTTTACACGCCATCGACTTCATTGAGAGACGAGTACCCAATTCCAAAGAATGCTCTGCTCTGTGGAAGAGCCACTGGGAGACGAACCAGGCCACTCTAGGCTCTATCCTCTGA MATKVGLVKLXPIQSTRRNCTVYHSGVSEVMDCNICGAGQRGNVEFKVGILGKAVPGSTVLLESLHAIDFIERRVPNSKECSALWKSHWETNQATLGSIL Homology
BLAST of CmoCh04G002200 vs. ExPASy TrEMBL
Match: A0A446XUH2 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Av1G244950 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.8e-06 Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of CmoCh04G002200 vs. ExPASy TrEMBL
Match: A0A6A3A066 (Plastocyanin-like domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110647pilonHSYRG00121 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.2e-06 Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of CmoCh04G002200 vs. ExPASy TrEMBL
Match: A0A444ER52 (Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_00023406 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-04 Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 0
BLAST of CmoCh04G002200 vs. ExPASy TrEMBL
Match: A0A287J1I5 (Plastocyanin-like domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.4e-04 Identity = 30/87 (34.48%), Postives = 48/87 (55.17%), Query Frame = 0
BLAST of CmoCh04G002200 vs. NCBI nr
Match: KAG6422710.1 (hypothetical protein SASPL_113089 [Salvia splendens]) HSP 1 Score: 83.2 bits (204), Expect = 1.4e-12 Identity = 36/70 (51.43%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of CmoCh04G002200 vs. NCBI nr
Match: KAG6419723.1 (hypothetical protein SASPL_116233 [Salvia splendens]) HSP 1 Score: 76.6 bits (187), Expect = 1.3e-10 Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of CmoCh04G002200 vs. NCBI nr
Match: VAI79866.1 (unnamed protein product [Triticum turgidum subsp. durum]) HSP 1 Score: 61.2 bits (147), Expect = 5.7e-06 Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of CmoCh04G002200 vs. NCBI nr
Match: KAE8696742.1 (hypothetical protein F3Y22_tig00110647pilonHSYRG00121 [Hibiscus syriacus]) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-05 Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of CmoCh04G002200 vs. NCBI nr
Match: RZR88914.1 (hypothetical protein BHM03_00016596 [Ensete ventricosum]) HSP 1 Score: 55.1 bits (131), Expect = 4.1e-04 Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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