CmoCh04G001230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G001230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein trichome birefringence-like 33
Location	Cmo_Chr04: 639508 .. 640669 (-)
RNA-Seq Expression	CmoCh04G001230
Synteny	CmoCh04G001230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAAATGAAATTTTACAGACAAGGGTCTTTCGAGGATGAAGCACAGGACATAGTGGAGCTGTCCACGGAGGATGCTTATCGCATGGCAATGAAGAGCATGTTGAGATGGGTTAGGAAGAACATGGACCCCAAAAAGACTAGGGTTTTCTTCACTGCCATGTCCCCTTCTCATGGAAAGTTAGTTCTCTTTTTTCATATTCGAATATAATGTGACATCTGATTTTACACGAAAAATTATTTGAGGATAACACATATTTGTAGCGGCTATATTGAATAATGTTTTTTGTCATAGCCATCGTAACGTAACCAAGCTTTCATTTGGCTCTATAGGAGTATTGATTGGGGTGGTGAACAGGGTGACAACTGCTACAACCAAACGACTCTAATTGAAGATTCAAACTATTGGGGATCCGATTCGAAAAAAAGCTTAATGAAAGTGATTGGGGAAGTTTTCAGCCGGTCGAAGTTTCCTATCACATTTCTTAACATCACACAGCTCTCGAGCTATCGTAGAGATGCACACACATCGATTTACAAGAAGCAATGGTCACCATTAACGCCGGAGCAGCTAGCGAACCCGGTAAGCTATGCGGATTGCATCCATTGGTGCATGCCTGGTCTCCAAGATACTTGGAATGAGCTTCTTTTTACCAAACTTTTATATCCTCATTAATTGATGTTAAAATTCATCTGGGTTCTTCCCTCGGATCCTCTTTCTTTCATGTGGGTTTGTGAGCTTTGGGATTGATTGGTAGAGATAAAAGATGAGAAAATCAATTGAAAGATAGAGAGTGAATGATCACTATCACGGTCGTACATCTTTAATCGTACGATGTCGTAATTTTGACACGCTTACGACAAGTCTTAAGGGGGACTCAAGCTCTATTCATATTTTTTGTCCGACTTTGTGGCTTCGTCGTATCGTCAACAAGGTTTGCCTTTGCCAATTGAACACATCCTATGTGAAATCTAAGTTTGTTCAGCCGCACATACTGTTCATGTGTGCGTGTTCAATCGTGTGTGACACAATCACGTTGCATCATACCGTCATCTTGGTTCCCAACAACACAATTCATGCATCGTGGTGCCGATCCATGCCTCAGGACACATCCATTCATGTGAAATTCAAAAAGGGATGAGCTGAGTTTTTTTTTTGG

mRNA sequence

ATGAATGAAATGAAATTTTACAGACAAGGGTCTTTCGAGGATGAAGCACAGGACATAGTGGAGCTGTCCACGGAGGATGCTTATCGCATGGCAATGAAGAGCATGTTGAGATGGGTTAGGAAGAACATGGACCCCAAAAAGACTAGGGTTTTCTTCACTGCCATGTCCCCTTCTCATGGAAAGAGTATTGATTGGGGTGGTGAACAGGGTGACAACTGCTACAACCAAACGACTCTAATTGAAGATTCAAACTATTGGGGATCCGATTCGAAAAAAAGCTTAATGAAAGTGATTGGGGAAGTTTTCAGCCGGTCGAAGTTTCCTATCACATTTCTTAACATCACACAGCTCTCGAGCTATCGTAGAGATGCACACACATCGATTTACAAGAAGCAATGGTCACCATTAACGCCGGAGCAGCTAGCGAACCCGGTAAGCTATGCGGATTGCATCCATTGGTGCATGCCTGGTCTCCAAGATACTTGGAATGAGCTTCTTTTTACCAAACTTTTATATCCTCATTAATTGATGTTAAAATTCATCTGGGTTCTTCCCTCGGATCCTCTTTCTTTCATGTGGGTTTGTGAGCTTTGGGATTGATTGGTAGAGATAAAAGATGAGAAAATCAATTGAAAGATAGAGAGTGAATGATCACTATCACGGTCGTACATCTTTAATCGTACGATGTCGTAATTTTGACACGCTTACGACAAGTCTTAAGGGGGACTCAAGCTCTATTCATATTTTTTGTCCGACTTTGTGGCTTCGTCGTATCGTCAACAAGGTTTGCCTTTGCCAATTGAACACATCCTATGTGAAATCTAAGTTTGTTCAGCCGCACATACTGTTCATGTGTGCGTGTTCAATCGTGTGTGACACAATCACGTTGCATCATACCGTCATCTTGGTTCCCAACAACACAATTCATGCATCGTGGTGCCGATCCATGCCTCAGGACACATCCATTCATGTGAAATTCAAAAAGGGATGAGCTGAGTTTTTTTTTTGG

Coding sequence (CDS)

ATGAATGAAATGAAATTTTACAGACAAGGGTCTTTCGAGGATGAAGCACAGGACATAGTGGAGCTGTCCACGGAGGATGCTTATCGCATGGCAATGAAGAGCATGTTGAGATGGGTTAGGAAGAACATGGACCCCAAAAAGACTAGGGTTTTCTTCACTGCCATGTCCCCTTCTCATGGAAAGAGTATTGATTGGGGTGGTGAACAGGGTGACAACTGCTACAACCAAACGACTCTAATTGAAGATTCAAACTATTGGGGATCCGATTCGAAAAAAAGCTTAATGAAAGTGATTGGGGAAGTTTTCAGCCGGTCGAAGTTTCCTATCACATTTCTTAACATCACACAGCTCTCGAGCTATCGTAGAGATGCACACACATCGATTTACAAGAAGCAATGGTCACCATTAACGCCGGAGCAGCTAGCGAACCCGGTAAGCTATGCGGATTGCATCCATTGGTGCATGCCTGGTCTCCAAGATACTTGGAATGAGCTTCTTTTTACCAAACTTTTATATCCTCATTAA

Protein sequence

MNEMKFYRQGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH

Homology

[Close]

BLAST of CmoCh04G001230 vs. ExPASy Swiss-Prot
Match: F4IH21 (Protein trichome birefringence-like 33 OS=Arabidopsis thaliana OX=3702 GN=TBL33 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.0e-77
Identity = 130/164 (79.27%), Postives = 146/164 (89.02%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSF+D+ ++IVE+STEDAYRM MKSMLRWV+ NMD KKTRVFFT+MSP+H K IDWGGE
Sbjct: 261 QGSFDDKEKNIVEVSTEDAYRMGMKSMLRWVKNNMDRKKTRVFFTSMSPTHAKGIDWGGE 320

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
            G NCYNQTTLIED +YWGSD +KS+MKVIGEVF RSK PIT LNITQ+S+YR+DAHTSI
Sbjct: 321 PGQNCYNQTTLIEDPSYWGSDCRKSIMKVIGEVFGRSKTPITLLNITQMSNYRKDAHTSI 380

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLY 173
           YKKQWSPLT EQL NP SYADC+HWC+PGLQDTWNELLF KL Y
Sbjct: 381 YKKQWSPLTAEQLENPTSYADCVHWCLPGLQDTWNELLFAKLFY 424

[Close]

BLAST of CmoCh04G001230 vs. ExPASy Swiss-Prot
Match: Q9SRL3 (Protein trichome birefringence-like 32 OS=Arabidopsis thaliana OX=3702 GN=TBL32 PE=2 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.5e-70
Identity = 120/166 (72.29%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           +GSF+DE + IVE+ +EDAYRMA+K+M++WV+KNMDP KTRVFF  MSP+H K  DWGGE
Sbjct: 286 EGSFKDEKKRIVEMESEDAYRMALKTMVKWVKKNMDPLKTRVFFATMSPTHYKGEDWGGE 345

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIG-EVFSRSKFPITFLNITQLSSYRRDAHTS 128
           QG NCYNQTT I+D N+W SD  K+LMKVIG E+  R++FP+T LNITQLS YR+DAHTS
Sbjct: 346 QGKNCYNQTTPIQDMNHWPSDCSKTLMKVIGEELDQRAEFPVTVLNITQLSGYRKDAHTS 405

Query: 129 IYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYP 174
           IYKKQWSPLT EQLANP SY+DCIHWC+PGLQDTWNEL F KL YP
Sbjct: 406 IYKKQWSPLTKEQLANPASYSDCIHWCLPGLQDTWNELFFAKLFYP 451

[Close]

BLAST of CmoCh04G001230 vs. ExPASy Swiss-Prot
Match: Q8LED3 (Protein trichome birefringence-like 3 OS=Arabidopsis thaliana OX=3702 GN=TBL3 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-42
Identity = 79/162 (48.77%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 10  GSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQ 69
           GSF +       L T+ AYR+ +K+   WV   +DP KTRVFFT MSP+H +S DWG   
Sbjct: 273 GSFGNGESGAEALDTQVAYRLGLKTWANWVDSTVDPNKTRVFFTTMSPTHTRSADWGKPN 332

Query: 70  GDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY 129
           G  C+N+T  I+D  +WG+ S K +MKV+  V       +T +NITQLS YR DAHTS+Y
Sbjct: 333 GTKCFNETKPIKDKKFWGTGSNKQMMKVVSSVIKHMTTHVTVINITQLSEYRIDAHTSVY 392

Query: 130 KKQWSP-LTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKL 171
            +     LT EQ A+P+ +ADCIHWC+PGL DTWN +L   L
Sbjct: 393 TETGGKILTAEQRADPMHHADCIHWCLPGLPDTWNRILLAHL 434

[Close]

BLAST of CmoCh04G001230 vs. ExPASy Swiss-Prot
Match: Q1PFD9 (Protein trichome birefringence-like 31 OS=Arabidopsis thaliana OX=3702 GN=TBL31 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 69/161 (42.86%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 15  EAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQGDNCY 74
           +  ++ E +   AY+MA+++  +W +  ++ +K +VFFT+MSP+H  S +W       CY
Sbjct: 249 DTSEVREYNVTTAYKMALETWAKWFKTKINSEKQKVFFTSMSPTHLWSWEWNPGSDGTCY 308

Query: 75  NQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY-KKQW 134
           ++   I+  +YWG+ S + +MK++G+V SR    +TFLNITQLS YR+D HT++Y +++ 
Sbjct: 309 DELYPIDKRSYWGTGSNQEIMKIVGDVLSRVGENVTFLNITQLSEYRKDGHTTVYGERRG 368

Query: 135 SPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
             LT EQ A+P +Y DCIHWC+PG+ DTWNE+L+  LL  H
Sbjct: 369 KLLTKEQRADPKNYGDCIHWCLPGVPDTWNEILYAYLLRSH 409

[Close]

BLAST of CmoCh04G001230 vs. ExPASy Swiss-Prot
Match: Q8RXQ1 (Protein trichome birefringence-like 35 OS=Arabidopsis thaliana OX=3702 GN=TBL35 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.8e-37
Identity = 73/171 (42.69%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 2   NEMKFYRQGSFE-----DEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMS 61
           N   ++RQ S +     +E     E+ + +   MAM S   WV  N+DP K RVFF  MS
Sbjct: 276 NTYLWWRQDSVKLRWSSEEKGSCEEVKSAEGMEMAMDSWGDWVANNVDPNKKRVFFVTMS 335

Query: 62  PSHGKSIDWGGEQGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQ 121
           P+H  S +W      NCY +   IE+ +YWGS S    M+++  V  R    ++ +NITQ
Sbjct: 336 PTHQWSREWNPGSEGNCYGEKKPIEEESYWGSGSDIPTMRMVKRVLERLGPKVSVINITQ 395

Query: 122 LSSYRRDAHTSIYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLF 168
           LS YR+D H S+Y+K W PL  ++L NP SY+DC HWC+PG+ D WN+LLF
Sbjct: 396 LSEYRKDGHPSVYRKFWEPLNEDRLKNPASYSDCTHWCVPGVPDVWNQLLF 446

[Close]

BLAST of CmoCh04G001230 vs. ExPASy TrEMBL
Match: A0A6J1FT88 (protein trichome birefringence-like 33 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447085 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.0e-94
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE
Sbjct: 267 QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 326

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI
Sbjct: 327 QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 386

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH
Sbjct: 387 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 432

[Close]

BLAST of CmoCh04G001230 vs. ExPASy TrEMBL
Match: A0A6J1FNM2 (protein trichome birefringence-like 33 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111447085 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.0e-94
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE
Sbjct: 253 QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 312

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI
Sbjct: 313 QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 372

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH
Sbjct: 373 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 418

[Close]

BLAST of CmoCh04G001230 vs. ExPASy TrEMBL
Match: A0A6J1FUZ1 (protein trichome birefringence-like 33 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447085 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.0e-94
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE
Sbjct: 258 QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 317

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI
Sbjct: 318 QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 377

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH
Sbjct: 378 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 423

[Close]

BLAST of CmoCh04G001230 vs. ExPASy TrEMBL
Match: A0A6J1FM86 (protein trichome birefringence-like 33 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447085 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.0e-94
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE
Sbjct: 257 QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 316

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI
Sbjct: 317 QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 376

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH
Sbjct: 377 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 422

[Close]

BLAST of CmoCh04G001230 vs. ExPASy TrEMBL
Match: A0A5A7T2T6 (Protein trichome birefringence-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001080 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.3e-87
Identity = 150/166 (90.36%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFED+ QDIVELSTEDAYRMAMKSMLRWVRKNM+PKKTRVFFT+MSPSHGKSIDWGGE
Sbjct: 252 QGSFEDQVQDIVELSTEDAYRMAMKSMLRWVRKNMNPKKTRVFFTSMSPSHGKSIDWGGE 311

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           +G NCYNQTTLIED NYWGSDS+KS+M+VIGEVF +SKFPITFLNITQLSSYRRDAHTSI
Sbjct: 312 EGGNCYNQTTLIEDPNYWGSDSRKSIMEVIGEVFGKSKFPITFLNITQLSSYRRDAHTSI 371

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADC+HWC+PGLQDTWNELLFTKL YP+
Sbjct: 372 YKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFTKLFYPY 417

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: XP_022941852.1 (protein trichome birefringence-like 33 isoform X4 [Cucurbita moschata])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE
Sbjct: 253 QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 312

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI
Sbjct: 313 QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 372

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH
Sbjct: 373 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 418

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: XP_022941850.1 (protein trichome birefringence-like 33 isoform X2 [Cucurbita moschata])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE
Sbjct: 258 QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 317

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI
Sbjct: 318 QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 377

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH
Sbjct: 378 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 423

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: XP_022941846.1 (protein trichome birefringence-like 33 isoform X1 [Cucurbita moschata] >XP_022941847.1 protein trichome birefringence-like 33 isoform X1 [Cucurbita moschata] >XP_022941848.1 protein trichome birefringence-like 33 isoform X1 [Cucurbita moschata] >XP_022941849.1 protein trichome birefringence-like 33 isoform X1 [Cucurbita moschata])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE
Sbjct: 267 QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 326

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI
Sbjct: 327 QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 386

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH
Sbjct: 387 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 432

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: XP_022941851.1 (protein trichome birefringence-like 33 isoform X3 [Cucurbita moschata])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE
Sbjct: 257 QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 316

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI
Sbjct: 317 QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 376

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH
Sbjct: 377 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 422

[Close]

BLAST of CmoCh04G001230 vs. NCBI nr
Match: KAG6599969.1 (Protein trichome birefringence-like 33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 336.3 bits (861), Expect = 1.6e-88
Identity = 156/166 (93.98%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSFEDEAQDIVEL T+DAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE
Sbjct: 258 QGSFEDEAQDIVELPTKDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 317

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
           +G NCYNQTTLIED NYWGSDSKKS+M+VIG+VF+ SKFPITFLNITQLSSYRRDAHTSI
Sbjct: 318 EGGNCYNQTTLIEDPNYWGSDSKKSIMEVIGKVFNMSKFPITFLNITQLSSYRRDAHTSI 377

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
           YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH
Sbjct: 378 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 423

[Close]

BLAST of CmoCh04G001230 vs. TAIR 10
Match: AT2G40320.1 (TRICHOME BIREFRINGENCE-LIKE 33 )

HSP 1 Score: 289.3 bits (739), Expect = 2.1e-78
Identity = 130/164 (79.27%), Postives = 146/164 (89.02%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           QGSF+D+ ++IVE+STEDAYRM MKSMLRWV+ NMD KKTRVFFT+MSP+H K IDWGGE
Sbjct: 261 QGSFDDKEKNIVEVSTEDAYRMGMKSMLRWVKNNMDRKKTRVFFTSMSPTHAKGIDWGGE 320

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSI 128
            G NCYNQTTLIED +YWGSD +KS+MKVIGEVF RSK PIT LNITQ+S+YR+DAHTSI
Sbjct: 321 PGQNCYNQTTLIEDPSYWGSDCRKSIMKVIGEVFGRSKTPITLLNITQMSNYRKDAHTSI 380

Query: 129 YKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLY 173
           YKKQWSPLT EQL NP SYADC+HWC+PGLQDTWNELLF KL Y
Sbjct: 381 YKKQWSPLTAEQLENPTSYADCVHWCLPGLQDTWNELLFAKLFY 424

[Close]

BLAST of CmoCh04G001230 vs. TAIR 10
Match: AT3G11030.1 (TRICHOME BIREFRINGENCE-LIKE 32 )

HSP 1 Score: 265.8 bits (678), Expect = 2.5e-71
Identity = 120/166 (72.29%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 9   QGSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGE 68
           +GSF+DE + IVE+ +EDAYRMA+K+M++WV+KNMDP KTRVFF  MSP+H K  DWGGE
Sbjct: 286 EGSFKDEKKRIVEMESEDAYRMALKTMVKWVKKNMDPLKTRVFFATMSPTHYKGEDWGGE 345

Query: 69  QGDNCYNQTTLIEDSNYWGSDSKKSLMKVIG-EVFSRSKFPITFLNITQLSSYRRDAHTS 128
           QG NCYNQTT I+D N+W SD  K+LMKVIG E+  R++FP+T LNITQLS YR+DAHTS
Sbjct: 346 QGKNCYNQTTPIQDMNHWPSDCSKTLMKVIGEELDQRAEFPVTVLNITQLSGYRKDAHTS 405

Query: 129 IYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYP 174
           IYKKQWSPLT EQLANP SY+DCIHWC+PGLQDTWNEL F KL YP
Sbjct: 406 IYKKQWSPLTKEQLANPASYSDCIHWCLPGLQDTWNELFFAKLFYP 451

[Close]

BLAST of CmoCh04G001230 vs. TAIR 10
Match: AT5G01360.1 (Plant protein of unknown function (DUF828) )

HSP 1 Score: 173.3 bits (438), Expect = 1.7e-43
Identity = 79/162 (48.77%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 10  GSFEDEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQ 69
           GSF +       L T+ AYR+ +K+   WV   +DP KTRVFFT MSP+H +S DWG   
Sbjct: 273 GSFGNGESGAEALDTQVAYRLGLKTWANWVDSTVDPNKTRVFFTTMSPTHTRSADWGKPN 332

Query: 70  GDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY 129
           G  C+N+T  I+D  +WG+ S K +MKV+  V       +T +NITQLS YR DAHTS+Y
Sbjct: 333 GTKCFNETKPIKDKKFWGTGSNKQMMKVVSSVIKHMTTHVTVINITQLSEYRIDAHTSVY 392

Query: 130 KKQWSP-LTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKL 171
            +     LT EQ A+P+ +ADCIHWC+PGL DTWN +L   L
Sbjct: 393 TETGGKILTAEQRADPMHHADCIHWCLPGLPDTWNRILLAHL 434

[Close]

BLAST of CmoCh04G001230 vs. TAIR 10
Match: AT1G73140.1 (Plant protein of unknown function (DUF828) )

HSP 1 Score: 161.0 bits (406), Expect = 8.6e-40
Identity = 69/161 (42.86%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 15  EAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMSPSHGKSIDWGGEQGDNCY 74
           +  ++ E +   AY+MA+++  +W +  ++ +K +VFFT+MSP+H  S +W       CY
Sbjct: 249 DTSEVREYNVTTAYKMALETWAKWFKTKINSEKQKVFFTSMSPTHLWSWEWNPGSDGTCY 308

Query: 75  NQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQLSSYRRDAHTSIY-KKQW 134
           ++   I+  +YWG+ S + +MK++G+V SR    +TFLNITQLS YR+D HT++Y +++ 
Sbjct: 309 DELYPIDKRSYWGTGSNQEIMKIVGDVLSRVGENVTFLNITQLSEYRKDGHTTVYGERRG 368

Query: 135 SPLTPEQLANPVSYADCIHWCMPGLQDTWNELLFTKLLYPH 175
             LT EQ A+P +Y DCIHWC+PG+ DTWNE+L+  LL  H
Sbjct: 369 KLLTKEQRADPKNYGDCIHWCLPGVPDTWNEILYAYLLRSH 409

[Close]

BLAST of CmoCh04G001230 vs. TAIR 10
Match: AT5G01620.1 (TRICHOME BIREFRINGENCE-LIKE 35 )

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-38
Identity = 73/171 (42.69%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 2   NEMKFYRQGSFE-----DEAQDIVELSTEDAYRMAMKSMLRWVRKNMDPKKTRVFFTAMS 61
           N   ++RQ S +     +E     E+ + +   MAM S   WV  N+DP K RVFF  MS
Sbjct: 276 NTYLWWRQDSVKLRWSSEEKGSCEEVKSAEGMEMAMDSWGDWVANNVDPNKKRVFFVTMS 335

Query: 62  PSHGKSIDWGGEQGDNCYNQTTLIEDSNYWGSDSKKSLMKVIGEVFSRSKFPITFLNITQ 121
           P+H  S +W      NCY +   IE+ +YWGS S    M+++  V  R    ++ +NITQ
Sbjct: 336 PTHQWSREWNPGSEGNCYGEKKPIEEESYWGSGSDIPTMRMVKRVLERLGPKVSVINITQ 395

Query: 122 LSSYRRDAHTSIYKKQWSPLTPEQLANPVSYADCIHWCMPGLQDTWNELLF 168
           LS YR+D H S+Y+K W PL  ++L NP SY+DC HWC+PG+ D WN+LLF
Sbjct: 396 LSEYRKDGHPSVYRKFWEPLNEDRLKNPASYSDCTHWCVPGVPDVWNQLLF 446

The following BLAST results are available for this feature:

BLAST of CmoCh04G001230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IH21	3.0e-77	79.27	Protein trichome birefringence-like 33 OS=Arabidopsis thaliana OX=3702 GN=TBL33 ...	[more]
Q9SRL3	3.5e-70	72.29	Protein trichome birefringence-like 32 OS=Arabidopsis thaliana OX=3702 GN=TBL32 ...	[more]
Q8LED3	2.4e-42	48.77	Protein trichome birefringence-like 3 OS=Arabidopsis thaliana OX=3702 GN=TBL3 PE...	[more]
Q1PFD9	1.2e-38	42.86	Protein trichome birefringence-like 31 OS=Arabidopsis thaliana OX=3702 GN=TBL31 ...	[more]
Q8RXQ1	1.8e-37	42.69	Protein trichome birefringence-like 35 OS=Arabidopsis thaliana OX=3702 GN=TBL35 ...	[more]

BLAST of CmoCh04G001230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT88	8.0e-94	100.00	protein trichome birefringence-like 33 isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1FNM2	8.0e-94	100.00	protein trichome birefringence-like 33 isoform X4 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1FUZ1	8.0e-94	100.00	protein trichome birefringence-like 33 isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1FM86	8.0e-94	100.00	protein trichome birefringence-like 33 isoform X3 OS=Cucurbita moschata OX=3662 ...	[more]
A0A5A7T2T6	7.3e-87	90.36	Protein trichome birefringence-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CmoCh04G001230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941852.1	1.7e-93	100.00	protein trichome birefringence-like 33 isoform X4 [Cucurbita moschata]	[more]
XP_022941850.1	1.7e-93	100.00	protein trichome birefringence-like 33 isoform X2 [Cucurbita moschata]	[more]
XP_022941846.1	1.7e-93	100.00	protein trichome birefringence-like 33 isoform X1 [Cucurbita moschata] >XP_02294...	[more]
XP_022941851.1	1.7e-93	100.00	protein trichome birefringence-like 33 isoform X3 [Cucurbita moschata]	[more]
KAG6599969.1	1.6e-88	93.98	Protein trichome birefringence-like 33, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of CmoCh04G001230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40320.1	2.1e-78	79.27	TRICHOME BIREFRINGENCE-LIKE 33	[more]
AT3G11030.1	2.5e-71	72.29	TRICHOME BIREFRINGENCE-LIKE 32	[more]
AT5G01360.1	1.7e-43	48.77	Plant protein of unknown function (DUF828)	[more]
AT1G73140.1	8.6e-40	42.86	Plant protein of unknown function (DUF828)	[more]
AT5G01620.1	1.2e-38	42.69	TRICHOME BIREFRINGENCE-LIKE 35	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026057	PC-Esterase	PFAM	PF13839	PC-Esterase	coord: 8..168 e-value: 1.5E-45 score: 156.1
None	No IPR available	PANTHER	PTHR32285:SF62	PROTEIN TRICHOME BIREFRINGENCE-LIKE 33	coord: 4..173
IPR029962	Trichome birefringence-like family	PANTHER	PTHR32285	PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED	coord: 4..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G001230.1	CmoCh04G001230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
biological_process	GO:1990937	xylan acetylation
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:1990538	xylan O-acetyltransferase activity