CmoCh03G014680 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G014680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like
Location	Cmo_Chr03: 10547353 .. 10551128 (-)
RNA-Seq Expression	CmoCh03G014680
Synteny	CmoCh03G014680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGCAAAATACATTCATCAGGTTAAGTGCCATGGGTGCTGCTGGCCTTTTCTTTTTCTCTTAATGGGAAAGCTTTGCTCTAAACCCAATCAGGGTCTTAAAGCGAACTACATTTTTGTCCTTCTGCCATCCTTCCTCCTCCTCTCTTAATGACAAGCTCCTCCGAAGCAGGCAGGCAGACTGTCAGAAGGAGGAAGATAGTTTTATTACATATTTATGTAAATTGAATGTTAAATTGGGATCAAATTCTCTTATTGAATGGAATATTTTCTCAGGTTAGCCTTGATTTCTGAGTTTGTAAGTAAGATTGACATGAATGGAAGAATATAACAAACAGGTTTCTAGTTTCTATTAAAGGAATGTTTCAAAGGATGATTTGAAATCACAAAATCACAGATAGATGATCTTCAAATTACATCACCTTCAAGTGTTCTAAAAATAAAGTCACTCTAAAACAAAGTTCAGAAAACACATCTCTCAGATAACCTTTATGTACTTTTCTTGAAAAGATGAACACTGTCTAACCCGAAAGATCATAAAACGAAGCAAATTTTGAAAAAAAAAAGAAAGAAAATTGAGCGATCCGATAAATGAGGAGAGGGGGGTGGATTTGGATGATTGATGAAATCTAAAGCAGTGAGGAAAAGGGGAATGTGAAAGGACCGGAAGATTTGACATACGGAAAAGACCTAACATTGCCTGTATTTACCCCATCTTGGGCGCCAAACTACGGAAGAGGCAGACAAAAACCAGCCATTCTGCCATAAACAATTAAGAAAAAGAGAGAGAGAAGTCTGCACTCCACCACCCTTTTCTGTTTCTTTCTAGTTCTACGCCCATCCCCCCACCTCCTTACAACCAACATTTTTTTGAACAATCTCATATTGGATTGGGTGCACATGATTTGGTAATTTCTGAGGCTGTTGCCGACGAAAAGACCAATGTCTGGTGTACTATATAGTACCCCCCTGAGTGTCAACATAATAAATATGTGCGACTACATTGCATGTGTTCTAAGTTCTTACTCAATTCATCTTCATCCTTTCCCTTTACAGACACCAACTGTTCTTCAAGGACTATGATTACTACTACTTCTTCCACGCATCACAGAATGAGAATATCACATGCATTATCATTCATTCACGTAAATTGAAACAAAATCTAGGGCGTGGGGAAATGAAAAGGCGAAATGAACAGTAAAGTGAGTTAGAAATTGAAGTGATTTGACCTGTTATTGGGGATTTTACGCGAAATTTTGGAGCCATTCCCATCGCATCCATCCATCACGGAAAGCTTAGTAGTCACATCCACTACCACATCCCCACGGCACCCCAAATTTTGCTTTGTTTCTTCAATCTCACCGCCGAAACAATGGTGCTTTAATTAATAACGTCTTCTCTTCTCTCCAAATTCAACAATCTCCTCCATTTTTCCATCTCCAACGCCTCTTTCCCGTCTGCTTCTTCTGCTTAGCTTTTTCTGGAATTCCTCTTGCAATAGCTCATCAATGAAATAACAATAACAAAATAGAAAGATTTAGGTTAATTTTTTTTTATAATTTAGAGATTTATTTTTACGGAAAAGAACGAAAGAAAAAAGGAAAAGGAAATGACGTTTCGAAACGATATTCAAAGTGTCATCGCTTGCTTACTTGACGTGGCTGTGTTTCCATAGGCCCTTCCTGTCCCCTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCAACTTCCCTCCCTTATTTGTTCTTTATATATTCTTCACCTCCTCCACTTCCTAACTTAATTACTTCTTCTCAAGTATGGCTGCCCTTAAGCGCTCTCCACCGCCGCCGCTGCCGCTGCGTCTTCACAGTTATTATTGACTCACTACTCACAGATCGATCATGTTGGCTATGGAATCCGTCTCCACCTCTACTACCACCACCTCCACCTCCGACAACCACCACCACCACCTCCAGTATCCTCTCTTGGAGCCTGCACCACCATCCCCACCGCCACCTGCACTCAGCAGGTACTTCGATTAAACAATCTTCTTATTTTTCTCATTATGTTCTGGTATTTCAACTCGAAGCATGAAAATGTTCTAGTTGTAACCGTACGTGACGCAGGTACGAGTCACAGAAGCGACGTGACTGGAACACGTTCGGGCAGTACCTAAAGAATCACCGCCCTCCACTCACACTATCCCGCTGCAGCGGCGCTCATATTCTCGAGTTCCTACGCTACCTGGACCAGTTCGGTAAGACCAAAGTCCACACCTCCTGCTGCCCCTTCTTCGGACACCCACAACCTCCTGCCCCCTGCCCATGCCCTCTCCGCCAGGCCTGGGGCAGCCTCGATGCTCTCATCGGCCGCCTCCGCGCCGCCTTCGAGGAGAACGGCGGCCACCCCGAGACCAACCCCTTCGGCACCCGAGCCGTCAGGCTCTATTTAAGGGAAGTGAGAGACTCGCAGGCCAAGGCCAGAGGGATTGCTTACGAGAAGAAGAAGCGTAAGAAATCCGCCATGGCTCCACTGAAGAAGCACCAACGACATGCCCCCGACGAACCCACGGATCACTCCGCTTCCTAACTTCCAATCAACGACTTAATCAATCTATTAATCACTTAATTTTCTGTAAGCCCTCGTAATTATAGTCACTATTTTCTTTAATTACCCCTTCCCAATCTCTGTTTATATATCCAGACGATTTTTTTTTTTAATGGATTTTAATATTTCGTGATAACTAAATCGAAAATAAAATTAAAATATATAGAAATAACGGTTCCCATCCCATTATTATAGATTGACAAATAAAATTCCA

mRNA sequence

ATGCTGGCAAAATACATTCATCAGGTTAAGTGCCATGGATCGATCATGTTGGCTATGGAATCCGTCTCCACCTCTACTACCACCACCTCCACCTCCGACAACCACCACCACCACCTCCAGTATCCTCTCTTGGAGCCTGCACCACCATCCCCACCGCCACCTGCACTCAGCAGGTACGAGTCACAGAAGCGACGTGACTGGAACACGTTCGGGCAGTACCTAAAGAATCACCGCCCTCCACTCACACTATCCCGCTGCAGCGGCGCTCATATTCTCGAGTTCCTACGCTACCTGGACCAGTTCGGTAAGACCAAAGTCCACACCTCCTGCTGCCCCTTCTTCGGACACCCACAACCTCCTGCCCCCTGCCCATGCCCTCTCCGCCAGGCCTGGGGCAGCCTCGATGCTCTCATCGGCCGCCTCCGCGCCGCCTTCGAGGAGAACGGCGGCCACCCCGAGACCAACCCCTTCGGCACCCGAGCCGTCAGGCTCTATTTAAGGGAAGTGAGAGACTCGCAGGCCAAGGCCAGAGGGATTGCTTACGAGAAGAAGAAGCGTAAGAAATCCGCCATGGCTCCACTGAAGAAGCACCAACGACATGCCCCCGACGAACCCACGGATCACTCCGCTTCCTAACTTCCAATCAACGACTTAATCAATCTATTAATCACTTAATTTTCTGTAAGCCCTCGTAATTATAGTCACTATTTTCTTTAATTACCCCTTCCCAATCTCTGTTTATATATCCAGACGATTTTTTTTTTTAATGGATTTTAATATTTCGTGATAACTAAATCGAAAATAAAATTAAAATATATAGAAATAACGGTTCCCATCCCATTATTATAGATTGACAAATAAAATTCCA

Coding sequence (CDS)

ATGCTGGCAAAATACATTCATCAGGTTAAGTGCCATGGATCGATCATGTTGGCTATGGAATCCGTCTCCACCTCTACTACCACCACCTCCACCTCCGACAACCACCACCACCACCTCCAGTATCCTCTCTTGGAGCCTGCACCACCATCCCCACCGCCACCTGCACTCAGCAGGTACGAGTCACAGAAGCGACGTGACTGGAACACGTTCGGGCAGTACCTAAAGAATCACCGCCCTCCACTCACACTATCCCGCTGCAGCGGCGCTCATATTCTCGAGTTCCTACGCTACCTGGACCAGTTCGGTAAGACCAAAGTCCACACCTCCTGCTGCCCCTTCTTCGGACACCCACAACCTCCTGCCCCCTGCCCATGCCCTCTCCGCCAGGCCTGGGGCAGCCTCGATGCTCTCATCGGCCGCCTCCGCGCCGCCTTCGAGGAGAACGGCGGCCACCCCGAGACCAACCCCTTCGGCACCCGAGCCGTCAGGCTCTATTTAAGGGAAGTGAGAGACTCGCAGGCCAAGGCCAGAGGGATTGCTTACGAGAAGAAGAAGCGTAAGAAATCCGCCATGGCTCCACTGAAGAAGCACCAACGACATGCCCCCGACGAACCCACGGATCACTCCGCTTCCTAA

Protein sequence

MLAKYIHQVKCHGSIMLAMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPLKKHQRHAPDEPTDHSAS

Homology

[Close]

BLAST of CmoCh03G014680 vs. ExPASy Swiss-Prot
Match: A2XAV5 (Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-69
Identity = 120/144 (83.33%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 49  PSPPPPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHT 108
           PS   P+LSRYESQKRRDWNTFGQYL+NHRPPL+LSRCSGAH+LEFL+Y+DQFGKTKVHT
Sbjct: 71  PSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHT 130

Query: 109 SCCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLRE 168
             CPF+GHP PPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFG RAVRLYLRE
Sbjct: 131 PVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLRE 190

Query: 169 VRDSQAKARGIAYEKKKRKKSAMA 193
           VR++QA+ARGI+YEKKKRKK + A
Sbjct: 191 VRETQARARGISYEKKKRKKPSSA 214

[Close]

BLAST of CmoCh03G014680 vs. ExPASy Swiss-Prot
Match: Q6K5X1 (Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-69
Identity = 120/144 (83.33%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 49  PSPPPPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHT 108
           PS   P+LSRYESQKRRDWNTFGQYL+NHRPPL+LSRCSGAH+LEFL+Y+DQFGKTKVHT
Sbjct: 71  PSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHT 130

Query: 109 SCCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLRE 168
             CPF+GHP PPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFG RAVRLYLRE
Sbjct: 131 PVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLRE 190

Query: 169 VRDSQAKARGIAYEKKKRKKSAMA 193
           VR++QA+ARGI+YEKKKRKK + A
Sbjct: 191 VRETQARARGISYEKKKRKKPSSA 214

[Close]

BLAST of CmoCh03G014680 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.7e-69
Identity = 128/172 (74.42%), Postives = 142/172 (82.56%), Query Frame = 0


Query: 17  LAMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLKN 76
           L + + +T+TTT+S+S +            +        LSRYE+QKRRDWNTFGQYL+N
Sbjct: 19  LMIAAAATTTTTSSSSSS------------SSGGSGTNQLSRYENQKRRDWNTFGQYLRN 78

Query: 77  HRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLDA 136
           HRPPL+LSRCSGAH+LEFLRYLDQFGKTKVHT  CPFFGHP PPAPC CPLRQAWGSLDA
Sbjct: 79  HRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDA 138

Query: 137 LIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKK 189
           LIGRLRAAFEENGG PETNPFG RAVRLYLREVRDSQAKARGI+YEKKKRK+
Sbjct: 139 LIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of CmoCh03G014680 vs. ExPASy Swiss-Prot
Match: A2YG32 (Protein G1-like2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24078 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.0e-68
Identity = 118/135 (87.41%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 54  PALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPF 113
           P  SRYESQKRRDW+TFGQYL+NHRPPL LSRCSGAH+LEFLRYLDQFGKTKVH + CPF
Sbjct: 18  PRPSRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCPF 77

Query: 114 FGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQ 173
           FGHP PPAPCPCPLRQAWGSLDAL+GRLRAAFEE+GG PE NPFG RAVRLYLREVRDSQ
Sbjct: 78  FGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVRLYLREVRDSQ 137

Query: 174 AKARGIAYEKKKRKK 189
           AKARGIAYEKK+RK+
Sbjct: 138 AKARGIAYEKKRRKR 152

[Close]

BLAST of CmoCh03G014680 vs. ExPASy Swiss-Prot
Match: Q652I1 (Protein G1-like2 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L2 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.0e-68
Identity = 118/135 (87.41%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 54  PALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPF 113
           P  SRYESQKRRDW+TFGQYL+NHRPPL LSRCSGAH+LEFLRYLDQFGKTKVH + CPF
Sbjct: 18  PRPSRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCPF 77

Query: 114 FGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQ 173
           FGHP PPAPCPCPLRQAWGSLDAL+GRLRAAFEE+GG PE NPFG RAVRLYLREVRDSQ
Sbjct: 78  FGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVRLYLREVRDSQ 137

Query: 174 AKARGIAYEKKKRKK 189
           AKARGIAYEKK+RK+
Sbjct: 138 AKARGIAYEKKRRKR 152

[Close]

BLAST of CmoCh03G014680 vs. ExPASy TrEMBL
Match: A0A6J1ED05 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433058 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.0e-111
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 16  MLAMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLK 75
           MLAMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLK
Sbjct: 1   MLAMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLK 60

Query: 76  NHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLD 135
           NHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLD
Sbjct: 61  NHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLD 120

Query: 136 ALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPLK 195
           ALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPLK
Sbjct: 121 ALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPLK 180

Query: 196 KHQRHAPDEPTDHSAS 212
           KHQRHAPDEPTDHSAS
Sbjct: 181 KHQRHAPDEPTDHSAS 196

[Close]

BLAST of CmoCh03G014680 vs. ExPASy TrEMBL
Match: A0A6J1IPW9 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucurbita maxima OX=3661 GN=LOC111478381 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.8e-101
Identity = 190/206 (92.23%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 16  MLAMESV-------STSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWN 75
           MLAMES        S STTTTSTSDNHHH   YPLLEPAPPSPPPPALSRYESQKRRDWN
Sbjct: 1   MLAMESASAVNSYSSASTTTTSTSDNHHH---YPLLEPAPPSPPPPALSRYESQKRRDWN 60

Query: 76  TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR 135
           TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR
Sbjct: 61  TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR 120

Query: 136 QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKK 195
           QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYE KKRKK
Sbjct: 121 QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYE-KKRKK 180

Query: 196 SAMAPLKKHQRHAPDEP---TDHSAS 212
           SAMAPLKKHQRHAPDEP   TDHSAS
Sbjct: 181 SAMAPLKKHQRHAPDEPMPLTDHSAS 202

[Close]

BLAST of CmoCh03G014680 vs. ExPASy TrEMBL
Match: A0A5A7UB86 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009900 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.4e-86
Identity = 163/189 (86.24%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 16  MLAMESVSTSTTT-TSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYL 75
           MLAME+ S++ T+ TS S    +HL YPLL PAPPSPP PALSRYESQKRRDWNTFGQYL
Sbjct: 1   MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL 60

Query: 76  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSL 135
           KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTS CPFFGHPQPPAPCPCPLRQAWGSL
Sbjct: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL 120

Query: 136 DALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPL 195
           DALIGRLRAAFEENGG PETNPFGTRAVRLYLREVR+SQAKARGIAYEKKKRKKSAMA L
Sbjct: 121 DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL 180

Query: 196 K-KHQRHAP 203
           K  H +  P
Sbjct: 181 KINHHQPMP 189

[Close]

BLAST of CmoCh03G014680 vs. ExPASy TrEMBL
Match: A0A1S3AZK8 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucumis melo OX=3656 GN=LOC103484288 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.4e-86
Identity = 163/189 (86.24%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 16  MLAMESVSTSTTT-TSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYL 75
           MLAME+ S++ T+ TS S    +HL YPLL PAPPSPP PALSRYESQKRRDWNTFGQYL
Sbjct: 1   MLAMEAASSAVTSYTSASTTSDNHLHYPLLLPAPPSPPTPALSRYESQKRRDWNTFGQYL 60

Query: 76  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSL 135
           KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTS CPFFGHPQPPAPCPCPLRQAWGSL
Sbjct: 61  KNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQAWGSL 120

Query: 136 DALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPL 195
           DALIGRLRAAFEENGG PETNPFGTRAVRLYLREVR+SQAKARGIAYEKKKRKKSAMA L
Sbjct: 121 DALIGRLRAAFEENGGQPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSAMASL 180

Query: 196 K-KHQRHAP 203
           K  H +  P
Sbjct: 181 KINHHQPMP 189

[Close]

BLAST of CmoCh03G014680 vs. ExPASy TrEMBL
Match: A0A0A0KPA1 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G526250 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.4e-86
Identity = 164/193 (84.97%), Postives = 172/193 (89.12%), Query Frame = 0


Query: 16  MLAME-----SVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTF 75
           MLAME     +V+T T+ ++TSDNH H   YPLL PAPPSPP PALSRYESQKRRDWNTF
Sbjct: 1   MLAMEVTASSAVTTYTSASTTSDNHPH---YPLLLPAPPSPPTPALSRYESQKRRDWNTF 60

Query: 76  GQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQA 135
           GQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTS CPFFGHPQPPAPCPCPLRQA
Sbjct: 61  GQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSSCPFFGHPQPPAPCPCPLRQA 120

Query: 136 WGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSA 195
           WGSLDALIGRLRAAFEENGG P+TNPFGTRAVRLYLREVR+SQAKARGIAYEKKKRKKS 
Sbjct: 121 WGSLDALIGRLRAAFEENGGQPDTNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSG 180

Query: 196 MAPLK-KHQRHAP 203
           MAPLK  H +  P
Sbjct: 181 MAPLKINHHQPMP 190

[Close]

BLAST of CmoCh03G014680 vs. NCBI nr
Match: XP_022925731.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita moschata])

HSP 1 Score: 411.0 bits (1055), Expect = 6.2e-111
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 16  MLAMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLK 75
           MLAMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLK
Sbjct: 1   MLAMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLK 60

Query: 76  NHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLD 135
           NHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLD
Sbjct: 61  NHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLD 120

Query: 136 ALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPLK 195
           ALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPLK
Sbjct: 121 ALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPLK 180

Query: 196 KHQRHAPDEPTDHSAS 212
           KHQRHAPDEPTDHSAS
Sbjct: 181 KHQRHAPDEPTDHSAS 196

[Close]

BLAST of CmoCh03G014680 vs. NCBI nr
Match: KAG6581495.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034783.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.6 bits (1041), Expect = 2.6e-109
Identity = 196/199 (98.49%), Postives = 196/199 (98.49%), Query Frame = 0


Query: 16  MLAMESVSTSTTTTSTSDN---HHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQ 75
           MLAMESVSTSTTTTSTSDN   HHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQ
Sbjct: 1   MLAMESVSTSTTTTSTSDNHHHHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQ 60

Query: 76  YLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWG 135
           YLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWG
Sbjct: 61  YLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWG 120

Query: 136 SLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMA 195
           SLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMA
Sbjct: 121 SLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMA 180

Query: 196 PLKKHQRHAPDEPTDHSAS 212
           PLKKHQRHAPDEPTDHSAS
Sbjct: 181 PLKKHQRHAPDEPTDHSAS 199

[Close]

BLAST of CmoCh03G014680 vs. NCBI nr
Match: XP_023544575.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.0 bits (1003), Expect = 6.7e-105
Identity = 192/203 (94.58%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 16  MLAMES-------VSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWN 75
           MLAMES        S STTTTSTSDN HHHL YPLLEPAPPSPPPPALSRYESQKRRDWN
Sbjct: 1   MLAMESASAVNSYTSASTTTTSTSDN-HHHLHYPLLEPAPPSPPPPALSRYESQKRRDWN 60

Query: 76  TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR 135
           TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR
Sbjct: 61  TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR 120

Query: 136 QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKK 195
           QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKK
Sbjct: 121 QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKK 180

Query: 196 SAMAPLKKHQRHAPDEPTDHSAS 212
           SAMAPLKKHQRHAPDEPTDHSAS
Sbjct: 181 SAMAPLKKHQRHAPDEPTDHSAS 202

[Close]

BLAST of CmoCh03G014680 vs. NCBI nr
Match: XP_022978370.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 190/206 (92.23%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 16  MLAMESV-------STSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWN 75
           MLAMES        S STTTTSTSDNHHH   YPLLEPAPPSPPPPALSRYESQKRRDWN
Sbjct: 1   MLAMESASAVNSYSSASTTTTSTSDNHHH---YPLLEPAPPSPPPPALSRYESQKRRDWN 60

Query: 76  TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR 135
           TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR
Sbjct: 61  TFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLR 120

Query: 136 QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKK 195
           QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYE KKRKK
Sbjct: 121 QAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYE-KKRKK 180

Query: 196 SAMAPLKKHQRHAPDEP---TDHSAS 212
           SAMAPLKKHQRHAPDEP   TDHSAS
Sbjct: 181 SAMAPLKKHQRHAPDEPMPLTDHSAS 202

[Close]

BLAST of CmoCh03G014680 vs. NCBI nr
Match: XP_038881876.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Benincasa hispida])

HSP 1 Score: 347.4 bits (890), Expect = 8.5e-92
Identity = 170/194 (87.63%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 18  AMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLKNH 77
           A+ S ++++TTTS SDNHHH  QYPLL PAPPSPPPPALSRYESQKRRDWNTFGQYLKNH
Sbjct: 9   AVNSYTSASTTTSNSDNHHHR-QYPLLVPAPPSPPPPALSRYESQKRRDWNTFGQYLKNH 68

Query: 78  RPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLDAL 137
           RPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLDAL
Sbjct: 69  RPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLDAL 128

Query: 138 IGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKKSAMAPLKKH 197
           IGRLRAAFEENGGHPETNPFGTRAVRLYLREVR+SQAKARGIAYEKKKRKKS M  +KK+
Sbjct: 129 IGRLRAAFEENGGHPETNPFGTRAVRLYLREVRESQAKARGIAYEKKKRKKSGMPSVKKN 188

Query: 198 QRHAPDEPTDHSAS 212
           Q   P    DHSAS
Sbjct: 189 Q---PMPLLDHSAS 198

[Close]

BLAST of CmoCh03G014680 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 262.3 bits (669), Expect = 3.3e-70
Identity = 128/172 (74.42%), Postives = 142/172 (82.56%), Query Frame = 0


Query: 17  LAMESVSTSTTTTSTSDNHHHHLQYPLLEPAPPSPPPPALSRYESQKRRDWNTFGQYLKN 76
           L + + +T+TTT+S+S +            +        LSRYE+QKRRDWNTFGQYL+N
Sbjct: 19  LMIAAAATTTTTSSSSSS------------SSGGSGTNQLSRYENQKRRDWNTFGQYLRN 78

Query: 77  HRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLDA 136
           HRPPL+LSRCSGAH+LEFLRYLDQFGKTKVHT  CPFFGHP PPAPC CPLRQAWGSLDA
Sbjct: 79  HRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDA 138

Query: 137 LIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRKK 189
           LIGRLRAAFEENGG PETNPFG RAVRLYLREVRDSQAKARGI+YEKKKRK+
Sbjct: 139 LIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of CmoCh03G014680 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 258.8 bits (660), Expect = 3.7e-69
Identity = 118/139 (84.89%), Postives = 128/139 (92.09%), Query Frame = 0


Query: 50  SPPPPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTS 109
           S P    SRYE+QKRRDWNTFGQYL+NHRPPL+LSRCSGAH+LEFLRYLDQFGKTKVHT+
Sbjct: 46  SSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTN 105

Query: 110 CCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREV 169
            C F+GHP PPAPCPCPLRQAWGSLDALIGRLRAAFEENGG PETNPFG RAVRLYLREV
Sbjct: 106 ICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREV 165

Query: 170 RDSQAKARGIAYEKKKRKK 189
           RD Q+KARG++YEKKKRK+
Sbjct: 166 RDMQSKARGVSYEKKKRKR 184

[Close]

BLAST of CmoCh03G014680 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-65
Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 46  PAPPSPPPPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTK 105
           P+  S PP   SRYESQKRRDWNTF QYLKNH+PPL LSRCSGAH++EFL+YLDQFGKTK
Sbjct: 19  PSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTK 78

Query: 106 VHTSCCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLY 165
           VH + CP+FGH QPP+PC CPL+QAWGSLDALIGRLRAA+EENGG P++NPF  RAVR+Y
Sbjct: 79  VHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIY 138

Query: 166 LREVRDSQAKARGIAYEKKKRKK 189
           LREVR+SQAKARGI YEKKKRK+
Sbjct: 139 LREVRESQAKARGIPYEKKKRKR 161

[Close]

BLAST of CmoCh03G014680 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 241.9 bits (616), Expect = 4.7e-64
Identity = 110/141 (78.01%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 53  PPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHILEFLRYLDQFGKTKVHTSCCP 112
           PP+ SRYE+QKRRDWNTF QYL+NHRPPL+L  CSGAH+LEFLRYLDQFGKTKVH   C 
Sbjct: 20  PPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCA 79

Query: 113 FFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGHPETNPFGTRAVRLYLREVRDS 172
           FFG P PPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFG+RAVRL+LREVRD 
Sbjct: 80  FFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDF 139

Query: 173 QAKARGIAYEKKKRKKSAMAP 194
           QAKARG++YEKK+++ +   P
Sbjct: 140 QAKARGVSYEKKRKRVNRQKP 160

[Close]

BLAST of CmoCh03G014680 vs. TAIR 10
Match: AT3G04510.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-62
Identity = 110/158 (69.62%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 32  SDNHHHHLQYPLLEPAPPS--PPPPALSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGA 91
           S NH++      L    PS    PP+ SRYE+QKRRDWNTF QYL+NH PPL+L+ CSGA
Sbjct: 5   SQNHNNRNPNTSLSTQTPSSFSSPPSSSRYENQKRRDWNTFCQYLRNHHPPLSLASCSGA 64

Query: 92  HILEFLRYLDQFGKTKVHTSCCPFFGHPQPPAPCPCPLRQAWGSLDALIGRLRAAFEENG 151
           H+L+FLRYLDQFGKTKVH   C FFG P PPAPCPCPLRQAWGSLDALIGRLRAA+EENG
Sbjct: 65  HVLDFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENG 124

Query: 152 GHPETNPFGTRAVRLYLREVRDSQAKARGIAYEKKKRK 188
           G PET+PFG+R+VR++LREVRD QAK+RG++YEKK+++
Sbjct: 125 GAPETSPFGSRSVRIFLREVRDFQAKSRGVSYEKKRKR 162

The following BLAST results are available for this feature:

BLAST of CmoCh03G014680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XAV5	1.2e-69	83.33	Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1	[more]
Q6K5X1	1.2e-69	83.33	Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1	[more]
Q9LW68	4.7e-69	74.42	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2YG32	3.0e-68	87.41	Protein G1-like2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24078 PE=3 SV=1	[more]
Q652I1	3.0e-68	87.41	Protein G1-like2 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L2 PE=1 SV=1	[more]

BLAST of CmoCh03G014680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ED05	3.0e-111	100.00	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IPW9	4.8e-101	92.23	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7UB86	3.4e-86	86.24	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3AZK8	3.4e-86	86.24	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KPA1	4.4e-86	84.97	ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G526250 PE=3 S...	[more]

BLAST of CmoCh03G014680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925731.1	6.2e-111	100.00	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita moschata]	[more]
KAG6581495.1	2.6e-109	98.49	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subs...	[more]
XP_023544575.1	6.7e-105	94.58	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978370.1	1.0e-100	92.23	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita maxima]	[more]
XP_038881876.1	8.5e-92	87.63	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Benincasa hispida]	[more]

BLAST of CmoCh03G014680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23290.2	3.3e-70	74.42	Protein of unknown function (DUF640)	[more]
AT2G31160.1	3.7e-69	84.89	Protein of unknown function (DUF640)	[more]
AT1G07090.1	1.9e-65	78.32	Protein of unknown function (DUF640)	[more]
AT5G28490.1	4.7e-64	78.01	Protein of unknown function (DUF640)	[more]
AT3G04510.1	2.6e-62	69.62	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 51..171 e-value: 4.5E-66 score: 220.7
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 58..185 score: 83.780014
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..211
None	No IPR available	PANTHER	PTHR31165:SF65	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-LIKE	coord: 22..199
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 22..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G014680.1	CmoCh03G014680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus