CmoCh03G013960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G013960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Outer envelope membrane protein 7
Location	Cmo_Chr03: 10192820 .. 10193080 (-)
RNA-Seq Expression	CmoCh03G013960
Synteny	CmoCh03G013960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCAATAACGACGGCGGTGATAGCAATCGGAGCGGTGATTCTAGGATGGATCACCATCGAGACTGCTTGCAAGCCTTGCCTCGAGAAAGGTCGCGAGGCCATTGATCGCTCTCTCAATCCGGATTACGATCCTGACGATGACGTTTCCGATATACGCGCTCCTCTGAATCCCAACGCTGATTTGAGTCCAGATCTTGATGGTGTAAAGGCTTCTCATCCATCTTCGACCACTTCTGAGGTCGTCAAGGGCGTTTGA

mRNA sequence

ATGGGGGCAATAACGACGGCGGTGATAGCAATCGGAGCGGTGATTCTAGGATGGATCACCATCGAGACTGCTTGCAAGCCTTGCCTCGAGAAAGGTCGCGAGGCCATTGATCGCTCTCTCAATCCGGATTACGATCCTGACGATGACGTTTCCGATATACGCGCTCCTCTGAATCCCAACGCTGATTTGAGTCCAGATCTTGATGGTGTAAAGGCTTCTCATCCATCTTCGACCACTTCTGAGGTCGTCAAGGGCGTTTGA

Coding sequence (CDS)

ATGGGGGCAATAACGACGGCGGTGATAGCAATCGGAGCGGTGATTCTAGGATGGATCACCATCGAGACTGCTTGCAAGCCTTGCCTCGAGAAAGGTCGCGAGGCCATTGATCGCTCTCTCAATCCGGATTACGATCCTGACGATGACGTTTCCGATATACGCGCTCCTCTGAATCCCAACGCTGATTTGAGTCCAGATCTTGATGGTGTAAAGGCTTCTCATCCATCTTCGACCACTTCTGAGGTCGTCAAGGGCGTTTGA

Protein sequence

MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPNADLSPDLDGVKASHPSSTTSEVVKGV

Homology

[Close]

BLAST of CmoCh03G013960 vs. ExPASy TrEMBL
Match: A0A6J1EGJ5 (uncharacterized protein LOC111433180 OS=Cucurbita moschata OX=3662 GN=LOC111433180 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN
Sbjct: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 87
          ADLSPDLDGVKASHPSSTTSEVVKGV
Sbjct: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 86

[Close]

BLAST of CmoCh03G013960 vs. ExPASy TrEMBL
Match: A0A6J1IVJ6 (uncharacterized protein LOC111478783 OS=Cucurbita maxima OX=3661 GN=LOC111478783 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          MGAITT+VIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN
Sbjct: 1  MGAITTSVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 87
          ADLSPDLDGVKAS PSSTTSEVVKGV
Sbjct: 61 ADLSPDLDGVKASRPSSTTSEVVKGV 86

[Close]

BLAST of CmoCh03G013960 vs. ExPASy TrEMBL
Match: A0A5D3CQ30 (Outer envelope membrane protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009070 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.6e-32
Identity = 72/86 (83.72%), Postives = 77/86 (89.53%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          MGAITTAVIAIGAV+ GWITIE ACKPCLEKGREAIDRSLNPDYDPDD+VSDIRAPLNPN
Sbjct: 1  MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 87
           + +PDLD    SHPSSTTSEV+K V
Sbjct: 61 HNFTPDLDDTNPSHPSSTTSEVIKAV 86

[Close]

BLAST of CmoCh03G013960 vs. ExPASy TrEMBL
Match: A0A1S3AZV1 (uncharacterized protein LOC103484363 OS=Cucumis melo OX=3656 GN=LOC103484363 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.6e-32
Identity = 72/86 (83.72%), Postives = 77/86 (89.53%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          MGAITTAVIAIGAV+ GWITIE ACKPCLEKGREAIDRSLNPDYDPDD+VSDIRAPLNPN
Sbjct: 1  MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 87
           + +PDLD    SHPSSTTSEV+K V
Sbjct: 61 HNFTPDLDDTNPSHPSSTTSEVIKAV 86

[Close]

BLAST of CmoCh03G013960 vs. ExPASy TrEMBL
Match: A0A6J1CY91 (uncharacterized protein LOC111015691 OS=Momordica charantia OX=3673 GN=LOC111015691 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.1e-30
Identity = 70/86 (81.40%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          M AITTAVIAIGAV+LGWITIE ACKPCLEKGR+AIDRSLNPDYDPDD+VS+IRAPLNPN
Sbjct: 1  MAAITTAVIAIGAVVLGWITIEIACKPCLEKGRDAIDRSLNPDYDPDDEVSNIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 87
          ADL+PDL    ASHPS T+S++VK V
Sbjct: 61 ADLAPDLHDSNASHPSYTSSDLVKAV 86

[Close]

BLAST of CmoCh03G013960 vs. NCBI nr
Match: XP_022925903.1 (uncharacterized protein LOC111433180 [Cucurbita moschata] >KAG6581432.1 Outer envelope membrane protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN
Sbjct: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 87
          ADLSPDLDGVKASHPSSTTSEVVKGV
Sbjct: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 86

[Close]

BLAST of CmoCh03G013960 vs. NCBI nr
Match: XP_023543277.1 (uncharacterized protein LOC111803204 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 1.4e-37
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN
Sbjct: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 87
          ADLSPDLD VKASHPSSTTSEVVKGV
Sbjct: 61 ADLSPDLDVVKASHPSSTTSEVVKGV 86

[Close]

BLAST of CmoCh03G013960 vs. NCBI nr
Match: XP_022979009.1 (uncharacterized protein LOC111478783 [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 2.4e-37
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          MGAITT+VIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN
Sbjct: 1  MGAITTSVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 87
          ADLSPDLDGVKAS PSSTTSEVVKGV
Sbjct: 61 ADLSPDLDGVKASRPSSTTSEVVKGV 86

[Close]

BLAST of CmoCh03G013960 vs. NCBI nr
Match: KAG7034724.1 (hypothetical protein SDJN02_04454, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.2 bits (409), Expect = 2.1e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN
Sbjct: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEV 83
          ADLSPDLDGVKASHPSSTTSEV
Sbjct: 61 ADLSPDLDGVKASHPSSTTSEV 82

[Close]

BLAST of CmoCh03G013960 vs. NCBI nr
Match: XP_008439626.1 (PREDICTED: uncharacterized protein LOC103484363 [Cucumis melo] >KAA0052538.1 outer envelope membrane protein 7 [Cucumis melo var. makuwa] >TYK13288.1 outer envelope membrane protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 2.0e-31
Identity = 72/86 (83.72%), Postives = 77/86 (89.53%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60
          MGAITTAVIAIGAV+ GWITIE ACKPCLEKGREAIDRSLNPDYDPDD+VSDIRAPLNPN
Sbjct: 1  MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLNPN 60

Query: 61 ADLSPDLDGVKASHPSSTTSEVVKGV 87
           + +PDLD    SHPSSTTSEV+K V
Sbjct: 61 HNFTPDLDDTNPSHPSSTTSEVIKAV 86

[Close]

BLAST of CmoCh03G013960 vs. TAIR 10
Match: AT2G34585.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 2.9e-20
Identity = 51/64 (79.69%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 1  MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDD-DV---SDIRAP 60
          M AIT+AVIAI  +ILGWITIE ACKPCLE GREAIDRSLNPDYDPDD DV   SD+RAP
Sbjct: 1  MAAITSAVIAIAGIILGWITIELACKPCLESGREAIDRSLNPDYDPDDQDVDSSSDVRAP 60

[Close]

BLAST of CmoCh03G013960 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 )

HSP 1 Score: 42.0 bits (97), Expect = 2.9e-04
Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 7  AVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDD 49
          A + + A+ LGW+ IE A KP L+K R +ID+S +P  DPDD
Sbjct: 10 ATVVVAAMALGWLAIEIAFKPFLDKFRSSIDKS-DPTKDPDD 50

The following BLAST results are available for this feature:

BLAST of CmoCh03G013960 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh03G013960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGJ5	6.2e-39	100.00	uncharacterized protein LOC111433180 OS=Cucurbita moschata OX=3662 GN=LOC1114331...	[more]
A0A6J1IVJ6	1.2e-37	97.67	uncharacterized protein LOC111478783 OS=Cucurbita maxima OX=3661 GN=LOC111478783...	[more]
A0A5D3CQ30	9.6e-32	83.72	Outer envelope membrane protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3AZV1	9.6e-32	83.72	uncharacterized protein LOC103484363 OS=Cucumis melo OX=3656 GN=LOC103484363 PE=...	[more]
A0A6J1CY91	3.1e-30	81.40	uncharacterized protein LOC111015691 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of CmoCh03G013960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925903.1	1.3e-38	100.00	uncharacterized protein LOC111433180 [Cucurbita moschata] >KAG6581432.1 Outer en...	[more]
XP_023543277.1	1.4e-37	98.84	uncharacterized protein LOC111803204 [Cucurbita pepo subsp. pepo]	[more]
XP_022979009.1	2.4e-37	97.67	uncharacterized protein LOC111478783 [Cucurbita maxima]	[more]
KAG7034724.1	2.1e-36	100.00	hypothetical protein SDJN02_04454, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008439626.1	2.0e-31	83.72	PREDICTED: uncharacterized protein LOC103484363 [Cucumis melo] >KAA0052538.1 out...	[more]

BLAST of CmoCh03G013960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34585.1	2.9e-20	79.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G52420.1	2.9e-04	50.00	outer envelope membrane protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..86
None	No IPR available	PANTHER	PTHR33982:SF1	OS07G0154300 PROTEIN	coord: 1..84
IPR038944	Outer envelope membrane protein 7-like	PANTHER	PTHR33982	OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATED	coord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G013960.1	CmoCh03G013960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane