CmoCh03G013840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G013840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L18a
Location	Cmo_Chr03: 10131908 .. 10140145 (-)
RNA-Seq Expression	CmoCh03G013840
Synteny	CmoCh03G013840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGACGACGGGAACTAGGGTTTTCGTTCGTGTCTTAGCCGCAGAAATCCTCCTCCTCAGAGAAAGCACCAGACGGAGCGTCCAGAGCTCTGCAATCGTCGCAAATGGTTACTTTCAGGGTAAGGCTTCCCTGTCTGAAATCTAATGCTTTCTTTATCTTTCTTTAGTTATAGGATTTGCAGAATAAGTTAATGGAACCGAGTTAAATTCAAGTATCCTTCTCGCTCTCTGTGTCTGTTATTTATGGAGCCGTTTGGAGGCAACGAAAGGAAATGGCTTGTTGATGTGGTTCAATTTGGGGTGATTTTTTTTTTTTTTTTTGCAGTTCCACCAATATCAGGTTGTGGGGAGGGCTCTCCCATCCGAAGCAGATGAGCATCCCAAGATTTACCGAATGAAGCTGTGGGCGACTAATGAAGTTCGCGCCAAATCCAAGTTTTGGTGAGTTTTCTCGTGTTGTTCTTTGATTGCCTTGTTTGAGAAAGTGTTATGTAAGTTCTTTTGGATTTATAAAATCCAGTTTTGATGCCTGATTTTGAAGTGTTAGCTAAACCCTATTTCTCTCTTTGTTTTTATTTTTCTTGCTTGGTCATAGGTATTTTCTGAGGAAGCTGAAGAAAGTCAAGAAGAGCAACGGCCAGGTGCTCGCCATCAATGAGGTAACGTGTTTTTTTTCCTCACGCACTTCTTCCTGTTAGAAGGGTCTAAAATTGTTATGCCGAGTATGTTTATCCGATCACATTGTAAATGAATGATCGCTCTGCTTTCATCATTCATCGATCTGAACTATTTCTCTTTTGCTTCTTTGTAAACTGTTGCCATGATTAACTTGTTCAGTGCTTTATCCCTTTCTGATGCGGTAGTGAAACTCGGAGGGGATTTTTGTCCTTTGAATTGTTTATAGTATTGTCATTGTGAGCGTAAATGTGAAGAACTTATTGTGGGATGAGAAATTGGGTGTATTTTCTCGTGTTTTGTTTTGTTGTAAGATTGATTCAATATCAATCTTCCGACTATGAATTTGTGATGCTTTTTGAATCGTGAATCTTGTAATATAAGAGAAAAAATTATCAGCCGTATTGATGAATGATTTTGATGTGTCCGTATGGGGGAAGTTTCCTCTGTGATTGCAATGGATATCTTGGTGTAACAAAGTTTGGCATCAATGGTGATTTTTTCCTCCAATTCCATTTCCATAGCTATTTTCTGGAGTTGGGTTGCTGAGTTCTAACACGGATAGTACTGATTCACTAGCTATATTATTCAGTTGGGTTTTTCTGATGGAATCGTCATTGTCTTCAGATCTTTGAGAAGAATCCAACGAAGATCAAGAACTATGGTATTTGGTTGCGTTACCAAAGTCGCACGGGTTATCACAACATGTACAAGGAGTACCGTGATACCACCTTAAATGGAGCTGTGGAAGCAATGTACACCGAAATGGCTTCTCGCCACAGGGTCAGGTCTCCTTGCATCCAAATCATCAAGACAGCAACCGTCCCTGCTAAGCTTTGCAAGAGGGAAAGCACCAAGCAATTCCACGACTCCAAGATCAAGTTTCCCTTGGTGTTCAGGACTGTTAGGCCACCCACCAGAAAGCTGAAGACCACTTACAAGGCTTCAAGGCCCAATTTATTTATGTAATTTGCTTGTTTAAGGAATGAGAAAAAGCTATCAGAGTTGTCTTATTTTGAAATCTTCGTTAGAGACCTTATCAGCTGTTCTTCAACGTTTCTCTTCATTTTATATATTATGGGATCAGACATTAATTTTTTGGGTTTATGTCATTTGGTTTCTTATGGAAGTGATCAGCGCCTTATTTAGTCTATGAATGTCATATTGATCTACTTGTGTTGCCTAATGTTGGCTATCAGGTAATCGATGCATGACAAGCAATGGAATCCTGTGGTTTTATGTTCGACTCCCATCGCCCAATACCAACTTGTGGGATCTTGAAATATTCATTTTAATGATGGTTTAATTTAGTACAACATTGCAACGTAGATTTATGGTTTAATTTATGGTTTAATTAAGTCCATTGTAGGGTAGGTTTATTCTTAGCCGATATTGTCCCTTGTAATAGCTCAAGTCTATCATTGTCTTCACTGTGTCTGTCTTCATTGTGTTTCTCTTTTTTAACTGTATGAAATTTAGATTAAAAATACCTCATTCACAATTTTAAAATTATAGTTTTTGGGATTTAGATTAAAAATATCTCATTCACAATTTTAAAATTATAATTATTTTCATATAATTTTATTAAATTTAATCTTCTAACGATTATAAATCATATATTTCTAAAATTGAGGCGTGTTATAATTTGAAAATAATAATAATAATATCACTATGGGCTGCATTGAACCTAGGTTTAAATTGAGCTCCACCCCCAGCCCGAATCATCGGCAACCAATAAACCGGATTGAGTCACATACAGAAAGGGCGAGCACGACCGGTTTCATCTCGGACTTCGCAGAGAAGAAGAATCTAAACAAGTAGGGCATCTGAATTCCTCATATTTTCTTTCTTCGATTGCTCCTTCACCATTACTGGAGAAGATGGGAGAGGAGGGAAAGAAAAAGAGGGTGGTTGTAGAATCGCTGGGATGGCTGACGGAGTCTTCGATCATGCCGAAAAAGCACAAGGCCATAGCTGGTGTCGGCGCATCTTCAATCATGGAGCTCAAGGCTCACCTCTACAAGTCTCAAGAAGAGTCCAAGAAATCCAAGGAATTGGCTGGCCCCGACGTCGAGTTCCACCGTGCAAAGAAGAAGATTACTCCCAAAGACCTTCTCTCCTCCCACAATTCCGGCGTCGAGGCCCGCGCTCTCAAGTATGTTTTCGATTTCTTCTTTTATGAGTTCCTATTTTAATTTTTTTGGTTGAATTTGTGAGTGTCTGTTTGGATTTGGTCATTGGAGTTTGGGGTCTACGAGCATCGAAGACTGCATTGGATTTTTTTTTCTAATAGCTTTTCACTTTAGATTCAAAGCGAGAATGGAATTGATTCATGTGAGTCTGAAAGAACATACCTGAATCAAATGAATGGTTTCCTCTGTATAAAGAGCGATGCAGTAATTCATATGCGCCTACAAGCTCAACTAATTTATAATAAGAGCCTTAGTCTTGTGTCTCAAGTGAAAATTTAAAACTTCGAAACTTGTCCCTCTGCTATGAGTGCTTTAAACATTAGTCCGAATTCCGCTGCTAATGGAAAAGTTCATGAAAGTATTACCAAGTTACTCTACGTCCCCAACTAAAAATTGACCTGATCCTGCCTGTTTGCAGAATGAAGAGCTAAAAGTAACCTAATTTCATCTGTCAAGGGAAAGTGTCTGAACATTTAATCGATGCATGGCATTAATAACTTGTCATTTTAGAGCCAAATATTTAGAGGATGTGAGTCAAGTCCTTAACATGGATGATGGACTGATGCACTCATCTTGCCACATTCCGTAATAGGTAACCCCATTTGATGTCTTTTGATCTGATTTTGCCACTGTATTTACTCTTATCATGATTGAGGAAATATGGTTTAGTTTAGGAAAACCACCTCTCATAGTTGGGATTACATCTTCAGAAGATCCTTAATTGAGGAAGATATCTCCGAATGGCCCTTTAAGCCTTCCAGCTCGTTCTACGTTTGCTCCCTTTCCAATTCTGATTCAAAATTAGGGCCTTTTCCATTCTCTAGTGGACTTTGCATTGAATGGTAAATTTCCCAAAAAAATTTAAAAAATTTCTATAGGCATTCAACCTTGAAAGTATCACCACACGTATAATCCAGAGAGATATCCAAAGCAACCTCACTCCAGGTTGGTGTCTTTTGAATGATACCGAGACACAAGGTCACTTATTTTGCACTGTTCTTTTGTTAACAAATTGGCATGTGGCACTCTTCCTAACAAATTAAATGGTATCCTGGCTACCATGTTGACTTGACATTATCATCCTTTTATGAAGAAAATGGGGATTCTTTGGCTAAAAATTTGGTAATGGATTGCCTCAATCGCCTACTCACCAATGCTGAATTTGAAGGGCAAATGAAGGACTTTCAGTTTGGTTATGAAGGCTTAAGCATCAACCACCTTCAATTTGCGAACGATATAATCCTCTTCTCTAATTTACTACATGTCTCCTCCTTAAAAACATGATCGAGATCGTAAAAACCTTCAAATCTTCTCTGGACAAAATATCAATCTCCAGAAAATAGAGATTGTGGGCAGCAATGTTAGCATAAAATTATCGAAGACATTGCCAACGGAATACGGTTGTAAAAAGGGTGAATGGCCAAATAAGTACCTAGGTTTACCTTTAAAGGGAACCCACATATCCTTCTCCTTCTGGAAGACCATTGTTAAAAAATAGAAAGAAGGCTATCAACATGACCATCATCTTATACTTCCAAAGGTGGAAGACTCACCTAATACAAGTCATATTGTCCAACCTCCCCACTTATTACATGTCTCTTTTTGAAATGTCACAAAAAGTTGTTAGATATAGAAAAATTATTTAGAAACCATATGTGGAAAGATGGCTCACACCCGTCCGATGGAATATCATGAATCTCCCAATAGACAAGGGAGGACCATGGAATATCATGAATCTCCCAATAGACAAGGGAGGATTTGGTCTATTTTCAATGAAGGAGAAGAACAAAGCTCTCTTTGCCAAATGGATATGGAGATAACATCACGAAGGAAATGCCTTGTGGAGAAAACTTATACAAGCTAAATATACTCCATAAATCAACTCTCTCCAACTTCCTCAAAGGGGCCATGGAAGTACATCAAAAAAATATCAAAACCTCATCACTATCCAAATTTGCCATAGGGTGGGTGATGGAGGAAGCAATTTTTTTGGGCTGATCCATGGATTGAAAATACCACGCTAGCCTTGTGGTATCCATTTTTTTATGGGTTGTCTCATAACAAAACAACCACAATCAAAGAAACATGGAATGATGTCTAACAATTTTTAGGAGCTGAAGCTTAGTAGGAACCTAAAGGATACTGAAGCTATGGAATGAGCCAAATTAATTCTCGATCTTGCCTCTTGCCTCAGTTGTATTGTCTAAAGAAGCAAACTCATTGACATGGCTTCCTGGTGTTGATGAGGTCTTCTCTACAATATCCGTGATGATGGATATAAGGAAAAAAGTAGAAGCAATAAACTCCACGCTAGCAAAGACAATATGGAAAGGAAATCACCCAAAAAGGTGAAGTTTTTCTCCTAGGAAATAGCACATAGAGCCATTAACACAAGTGAAAATCTACAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAAAAGAATGTCCTATATGACTCTATTTCCAAGTTGGTGCCAATTATGCAAGAAAGACAACAAATCACAAAGTCACCTATTTATGCAATGCACATACGCTCAATATTTTTGGACAAGGATTCTCAATATTTTCGGATGGCGTCTCACTTTTTCTAGGTAGGCAAAGGATTTATTGGGCACGGTTTTAACGTACCACCCCTTCAAGAATGCAAAAGCCTTGCTATAGAAAAACCTCATCATAGCATTCTTCAACCACGCGGTTTACCACTTGGTGTAAATTGTCCTCCCTCATTGTAAATTGGGAAGGTCTTTTGTAAACATCATGGAACAACCTAACTTTCAAACATAAAATTAACTTCCAACAGCACAATAAAACTTTTTGATATTTTTCTAGAAACTGTTTTTGGTATTGCTCTATCTAGATGTAAAAGTTACTGTATAGTCTAAATGGTTTTTTTTTTTTTTTTTGTCAATTGGAAGACCTTTTGTCTCCGTTGTAATCTTCCTTGGATTAGGGGTTTGACTCTTCTTTCTTTTTTGCAACATTTCATATCATCAATGTATTACCTTTTTCCTATTTCCCAAAAAAAGAAAATTTTACGACAGGCAGGTTGGGTATCCTTGCTCCCAGTCCAAGTTACAATCTGAGGAAGAGCTCGTACACAACCTGATTATTTGGAAGTGGGACATTTGGCGTCTACGTGTTCACTATATTTGTTATTCTAAGTTCAATTTCAAATTCTAGCCCAAGATGGGGGTGGGGAAGATAGAATTCAAGAGTTTGCAAGGTACCCTCCATAGGTTTTTTGGCCTAGGAAAAAGGAAGAGAGGTGAACTCTTCGTTTTCTTAGCAAAAGAGGTCATTTATCCCGCAGTGTAGTATGGCTATTTCGAGTGAAGGCAATTTTTTTTTTTTTTTCTGGATTTCATCCCTTCAGATTATATTCTTTGACAGACTCAAGTTAAGGTGTTTTAAACGTATCCTACTTCCTGTCCTTTTTATTATTTCCTTAGAAATAGGCAATTGGTGCTCAATGGAAGAATTAAAGCGACAACAGTTGTATGTGCAGGGGTAATAATGCTGACAGACTCAATTACTTCCTGTCCTTTTTATTATTTGACAAACTCAAGTAATAATGCTGAGATTACCTAGATGTGTGTATGCGTTTTTTTTAGTACAAAAAATATGTGCAGGGGTATATGGGTATTGAGATTTGAACCTCCGACCTCAAGGGAAGGAGTATATGCCAACCAATGCTAAATTATGCTTGTGCGAGATGTCTTAGTTTTTTCCACAGCAATTATTTGGTGTATTATTAGTTTTCTTTAATGTCCTTGTTTAGACTAAAACAATCGTGCTAACAAGTTGTTGTCTAATATATTTCTGTTAAAATCCAGGGATAAACTTGAGCTTAAAGCTATTAAGGATGGATCAGTAAGCTATGCTGCACTAGAGAAGAAGGCTGCGATATATGACAAGCTAGTGAAAGGGGAACTCTCAGATGAGGAAGATCAGGAGAAGTATTGTGTGGATTTTTTCCGCAAGAATCTTGAGCAGGACGAATCACAGCTACCACAACACCATGATGCTTCTGCACCCGGAGAAACGGACACTCCAGAAGACGAGACCGAGCCATCGTTCTTGTTTAACTCAAAGACAACAGGACTTGGGAGGACGTCTGGAATAGTGGACAACAACGAGCATAAGCGCTTTGTGAGGTAAAACTCCTCTTTCCCCTGTTTTGGAATTATCAAGCACCAAACAAGCCCTTGGCTAGCAACTTCCATTATAACATTGTTCTGAAATGAGGCTCACTCATTGATTATTTTGATATTGGTTTTCTTTAGGGAGGTTCATGAAGAAGTAAATCAAGCAAGAGAGAAGGCATCCGAGCTGAAATTGCGTAGACACGAGCAGGCCGCAGCACGTCGTGAGAAATTGAAACTGGCATATCTCCGTAAACAAATCGAGAAGTTGAAGGCTTCATCAAATTCAGGACAAACGTAA

mRNA sequence

AAAGACGACGGGAACTAGGGTTTTCGTTCGTGTCTTAGCCGCAGAAATCCTCCTCCTCAGAGAAAGCACCAGACGGAGCGTCCAGAGCTCTGCAATCGTCGCAAATGGTTACTTTCAGGTTCCACCAATATCAGGTTGTGGGGAGGGCTCTCCCATCCGAAGCAGATGAGCATCCCAAGATTTACCGAATGAAGCTGTGGGCGACTAATGAAGTTCGCGCCAAATCCAAGTTTTGGTATTTTCTGAGGAAGCTGAAGAAAGTCAAGAAGAGCAACGGCCAGGTGCTCGCCATCAATGAGATCTTTGAGAAGAATCCAACGAAGATCAAGAACTATGGTATTTGGTTGCGTTACCAAAGTCGCACGGGTTATCACAACATGTACAAGGAGTACCGTGATACCACCTTAAATGGAGCTGTGGAAGCAATGTACACCGAAATGGCTTCTCGCCACAGGGTCAGGTCTCCTTGCATCCAAATCATCAAGACAGCAACCGTCCCTGCTAAGCTTTGCAAGAGGGAAAGCACCAAGCAATTCCACGACTCCAAGATCAAGTTTCCCTTGGTGTTCAGGACTGTTAGGCCACCCACCAGAAAGCTGAAGACCACTTACAAGGCTTCAAGGCCCAATTTATTTATAAAGGGCGAGCACGACCGGTTTCATCTCGGACTTCGCAGAGAAGAAGAATCTAAACAAGTAGGGCATCTGAATTCCTCATATTTTCTTTCTTCGATTGCTCCTTCACCATTACTGGAGAAGATGGGAGAGGAGGGAAAGAAAAAGAGGGTGGTTGTAGAATCGCTGGGATGGCTGACGGAGTCTTCGATCATGCCGAAAAAGCACAAGGCCATAGCTGGTGTCGGCGCATCTTCAATCATGGAGCTCAAGGCTCACCTCTACAAGTCTCAAGAAGAGTCCAAGAAATCCAAGGAATTGGCTGGCCCCGACGTCGAGTTCCACCGTGCAAAGAAGAAGATTACTCCCAAAGACCTTCTCTCCTCCCACAATTCCGGCGTCGAGGCCCGCGCTCTCAAGGATAAACTTGAGCTTAAAGCTATTAAGGATGGATCAGTAAGCTATGCTGCACTAGAGAAGAAGGCTGCGATATATGACAAGCTAGTGAAAGGGGAACTCTCAGATGAGGAAGATCAGGAGAAGTATTGTGTGGATTTTTTCCGCAAGAATCTTGAGCAGGACGAATCACAGCTACCACAACACCATGATGCTTCTGCACCCGGAGAAACGGACACTCCAGAAGACGAGACCGAGCCATCGTTCTTGTTTAACTCAAAGACAACAGGACTTGGGAGGACGTCTGGAATAGTGGACAACAACGAGCATAAGCGCTTTGTGAGGGAGGTTCATGAAGAAGTAAATCAAGCAAGAGAGAAGGCATCCGAGCTGAAATTGCGTAGACACGAGCAGGCCGCAGCACGTCGTGAGAAATTGAAACTGGCATATCTCCGTAAACAAATCGAGAAGTTGAAGGCTTCATCAAATTCAGGACAAACGTAA

Coding sequence (CDS)

ATGGTTACTTTCAGGTTCCACCAATATCAGGTTGTGGGGAGGGCTCTCCCATCCGAAGCAGATGAGCATCCCAAGATTTACCGAATGAAGCTGTGGGCGACTAATGAAGTTCGCGCCAAATCCAAGTTTTGGTATTTTCTGAGGAAGCTGAAGAAAGTCAAGAAGAGCAACGGCCAGGTGCTCGCCATCAATGAGATCTTTGAGAAGAATCCAACGAAGATCAAGAACTATGGTATTTGGTTGCGTTACCAAAGTCGCACGGGTTATCACAACATGTACAAGGAGTACCGTGATACCACCTTAAATGGAGCTGTGGAAGCAATGTACACCGAAATGGCTTCTCGCCACAGGGTCAGGTCTCCTTGCATCCAAATCATCAAGACAGCAACCGTCCCTGCTAAGCTTTGCAAGAGGGAAAGCACCAAGCAATTCCACGACTCCAAGATCAAGTTTCCCTTGGTGTTCAGGACTGTTAGGCCACCCACCAGAAAGCTGAAGACCACTTACAAGGCTTCAAGGCCCAATTTATTTATAAAGGGCGAGCACGACCGGTTTCATCTCGGACTTCGCAGAGAAGAAGAATCTAAACAAGTAGGGCATCTGAATTCCTCATATTTTCTTTCTTCGATTGCTCCTTCACCATTACTGGAGAAGATGGGAGAGGAGGGAAAGAAAAAGAGGGTGGTTGTAGAATCGCTGGGATGGCTGACGGAGTCTTCGATCATGCCGAAAAAGCACAAGGCCATAGCTGGTGTCGGCGCATCTTCAATCATGGAGCTCAAGGCTCACCTCTACAAGTCTCAAGAAGAGTCCAAGAAATCCAAGGAATTGGCTGGCCCCGACGTCGAGTTCCACCGTGCAAAGAAGAAGATTACTCCCAAAGACCTTCTCTCCTCCCACAATTCCGGCGTCGAGGCCCGCGCTCTCAAGGATAAACTTGAGCTTAAAGCTATTAAGGATGGATCAGTAAGCTATGCTGCACTAGAGAAGAAGGCTGCGATATATGACAAGCTAGTGAAAGGGGAACTCTCAGATGAGGAAGATCAGGAGAAGTATTGTGTGGATTTTTTCCGCAAGAATCTTGAGCAGGACGAATCACAGCTACCACAACACCATGATGCTTCTGCACCCGGAGAAACGGACACTCCAGAAGACGAGACCGAGCCATCGTTCTTGTTTAACTCAAAGACAACAGGACTTGGGAGGACGTCTGGAATAGTGGACAACAACGAGCATAAGCGCTTTGTGAGGGAGGTTCATGAAGAAGTAAATCAAGCAAGAGAGAAGGCATCCGAGCTGAAATTGCGTAGACACGAGCAGGCCGCAGCACGTCGTGAGAAATTGAAACTGGCATATCTCCGTAAACAAATCGAGAAGTTGAAGGCTTCATCAAATTCAGGACAAACGTAA

Protein sequence

MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRSPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFIKGEHDRFHLGLRREEESKQVGHLNSSYFLSSIAPSPLLEKMGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELAGPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKLVKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTTGLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIEKLKASSNSGQT

Homology

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BLAST of CmoCh03G013840 vs. ExPASy Swiss-Prot
Match: Q9ATF5 (60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 6.7e-92
Identity = 163/178 (91.57%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVTFRFHQYQVVGR LPSE DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRS 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE MY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTAT+PAKLCKRES+KQFH+SKIKFPLV R +RPP+RKLKT YKASRPNLF+
Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178

[Close]

BLAST of CmoCh03G013840 vs. ExPASy Swiss-Prot
Match: P51418 (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=2)

HSP 1 Score: 332.0 bits (850), Expect = 1.1e-89
Identity = 160/178 (89.89%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRS 120
           LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYTEMASRHRVR 
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLVFR VRPP+RKLKTTYKA++PNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]

BLAST of CmoCh03G013840 vs. ExPASy Swiss-Prot
Match: Q9LUD4 (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.2e-88
Identity = 158/175 (90.29%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 4   FRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 63
           FRFHQYQVVGRALP+E DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRSPCI 123
           NEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VE MYTEMASRHRVR PCI
Sbjct: 64  NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCI 123

Query: 124 QIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFI 179
           QIIKTATVPAKLCKRE TKQFH+SKIKFPLVFR VRPP+RKLKTTYKAS+PNLF+
Sbjct: 124 QIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

[Close]

BLAST of CmoCh03G013840 vs. ExPASy Swiss-Prot
Match: Q943F3 (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE=1 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.0e-88
Identity = 158/178 (88.76%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FRFHQYQVVGR LP+  DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRS 120
           LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATV  KLCKR++TKQFH S IKFPLV+R VRPPTRKLKTT+KASRPNLF+
Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178

[Close]

BLAST of CmoCh03G013840 vs. ExPASy Swiss-Prot
Match: Q8L7K0 (60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 8.5e-87
Identity = 155/178 (87.08%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRS 120
           LAINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPA LCKRESTKQFH+SKIKFPLVFR VRPPTRKLKTT+KA++PNLF+
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

[Close]

BLAST of CmoCh03G013840 vs. ExPASy TrEMBL
Match: A0A6J1EJN5 (uncharacterized protein At4g18257-like OS=Cucurbita moschata OX=3662 GN=LOC111433213 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 5.5e-129
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 219 MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 278
           MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA
Sbjct: 1   MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 60

Query: 279 GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 338
           GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL
Sbjct: 61  GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 120

Query: 339 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 398
           VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT
Sbjct: 121 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 180

Query: 399 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 458
           GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE
Sbjct: 181 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 240

Query: 459 KLKASSNSGQT 470
           KLKASSNSGQT
Sbjct: 241 KLKASSNSGQT 251

[Close]

BLAST of CmoCh03G013840 vs. ExPASy TrEMBL
Match: A0A6J1IL43 (uncharacterized protein At4g18257-like OS=Cucurbita maxima OX=3661 GN=LOC111478025 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 4.8e-125
Identity = 246/251 (98.01%), Postives = 246/251 (98.01%), Query Frame = 0


Query: 219 MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 278
           MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA
Sbjct: 1   MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 60

Query: 279 GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 338
           GPDVEFHRAKKKIT KDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL
Sbjct: 61  GPDVEFHRAKKKITTKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 120

Query: 339 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 398
           VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAP ETDTPEDETEPSFLFNSKTT
Sbjct: 121 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPRETDTPEDETEPSFLFNSKTT 180

Query: 399 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 458
           GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELK RR EQAAARREKLK AYLRKQIE
Sbjct: 181 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKFRRQEQAAARREKLKQAYLRKQIE 240

Query: 459 KLKASSNSGQT 470
           KLKASSNSGQT
Sbjct: 241 KLKASSNSGQT 251

[Close]

BLAST of CmoCh03G013840 vs. ExPASy TrEMBL
Match: A0A1S3AZX7 (uncharacterized protein At4g18257 OS=Cucumis melo OX=3656 GN=LOC103484378 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 5.8e-123
Identity = 243/280 (86.79%), Postives = 258/280 (92.14%), Query Frame = 0


Query: 190 RREEESKQVGHLNSSYFLSSIAPSPLLEKMGEEGKKKRVVVESLGWLTESSIMPKKHKAI 249
           ++EEES+QVG LN SY L SI+PS LL+ M EEGKKKRVVVESLGWLTESSIMPKKHKAI
Sbjct: 45  KKEEESEQVGLLNFSYCLFSISPSLLLKNMEEEGKKKRVVVESLGWLTESSIMPKKHKAI 104

Query: 250 AGVGASSIMELKAHLYKSQEESKKSKELAGPDVEFHRAKKKITPKDLLSSHNSGVEARAL 309
           AGVGASSIMELKAHLYKSQEESKKSKELAGP VEFHRAK KITPKD+LSS NSGVEARAL
Sbjct: 105 AGVGASSIMELKAHLYKSQEESKKSKELAGPGVEFHRAKNKITPKDILSSRNSGVEARAL 164

Query: 310 KDKLELKAIKDGSVSYAALEKKAAIYDKLVKGELSDEEDQEKYCVDFFRKNLEQDESQLP 369
           KDKLELKAI DGSVSYAALEKKAA+Y+KLV GEL DEEDQEKYCVDFFRKNLEQDESQLP
Sbjct: 165 KDKLELKAINDGSVSYAALEKKAALYEKLVNGELPDEEDQEKYCVDFFRKNLEQDESQLP 224

Query: 370 QHHDASAPGETDTPEDETEPSFLFNSKTTGLGRTSGIVDNNEHKRFVREVHEEVNQAREK 429
           Q HDA A GET+TPEDET+  FLFNSK+TGLGRTSG +DN+EHKRFVREVHEEVNQAREK
Sbjct: 225 QGHDAPASGETETPEDETDRPFLFNSKSTGLGRTSGTMDNDEHKRFVREVHEEVNQAREK 284

Query: 430 ASELKLRRHEQAAARREKLKLAYLRKQIEKLKASSNSGQT 470
           ASELKLRR EQAA RREKLK AYLRKQ+EKLKAS+NSGQT
Sbjct: 285 ASELKLRRQEQAAVRREKLKQAYLRKQVEKLKASTNSGQT 324

[Close]

BLAST of CmoCh03G013840 vs. ExPASy TrEMBL
Match: A0A0A0KLY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G522800 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 2.4e-116
Identity = 231/251 (92.03%), Postives = 238/251 (94.82%), Query Frame = 0


Query: 219 MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 278
           M EEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA
Sbjct: 1   MEEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 60

Query: 279 GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 338
           GP VEFHRAK KITPKD+LSS NSGVEARALKDKLELKAI DGSVSYAALEKKAAIY+KL
Sbjct: 61  GPGVEFHRAKNKITPKDILSSRNSGVEARALKDKLELKAINDGSVSYAALEKKAAIYEKL 120

Query: 339 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 398
           VKGEL DEEDQEKYCVDFFRKNLEQDESQLPQ HDA APGE +TPEDET+ SFLFNSKTT
Sbjct: 121 VKGELPDEEDQEKYCVDFFRKNLEQDESQLPQGHDAPAPGEMETPEDETKTSFLFNSKTT 180

Query: 399 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 458
           GLGRTSG +DN+EHKRFVREVHEEVNQAREKASELKLRR EQAAARREKLK AYLRKQ+E
Sbjct: 181 GLGRTSGTMDNDEHKRFVREVHEEVNQAREKASELKLRRQEQAAARREKLKQAYLRKQVE 240

Query: 459 KLKASSNSGQT 470
           KLKASSNSGQT
Sbjct: 241 KLKASSNSGQT 251

[Close]

BLAST of CmoCh03G013840 vs. ExPASy TrEMBL
Match: A0A6J1D067 (uncharacterized protein At4g18257-like OS=Momordica charantia OX=3673 GN=LOC111015806 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 3.1e-116
Identity = 231/251 (92.03%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 219 MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 278
           MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLY SQEESK+SKELA
Sbjct: 1   MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYMSQEESKRSKELA 60

Query: 279 GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 338
           GP VEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAI DGSVSYAALEKKAAIYDKL
Sbjct: 61  GPGVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAINDGSVSYAALEKKAAIYDKL 120

Query: 339 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 398
           VKGELSDEED+EKYCVDFFRKNLEQDESQL Q  DA+APGE D PEDETE SFLFN KTT
Sbjct: 121 VKGELSDEEDKEKYCVDFFRKNLEQDESQLSQDRDATAPGEMDIPEDETESSFLFNPKTT 180

Query: 399 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 458
           GLGRTSG +DNNEHKRFVREVHEEVNQAREKASE+KLRR EQA ARREKL+ AYLRKQIE
Sbjct: 181 GLGRTSGTMDNNEHKRFVREVHEEVNQAREKASEVKLRRQEQATARREKLRQAYLRKQIE 240

Query: 459 KLKASSNSGQT 470
           KLKASSNSGQT
Sbjct: 241 KLKASSNSGQT 251

[Close]

BLAST of CmoCh03G013840 vs. NCBI nr
Match: XP_022925950.1 (uncharacterized protein At4g18257-like [Cucurbita moschata])

HSP 1 Score: 471.1 bits (1211), Expect = 1.1e-128
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 219 MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 278
           MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA
Sbjct: 1   MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 60

Query: 279 GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 338
           GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL
Sbjct: 61  GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 120

Query: 339 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 398
           VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT
Sbjct: 121 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 180

Query: 399 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 458
           GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE
Sbjct: 181 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 240

Query: 459 KLKASSNSGQT 470
           KLKASSNSGQT
Sbjct: 241 KLKASSNSGQT 251

[Close]

BLAST of CmoCh03G013840 vs. NCBI nr
Match: KAG6581422.1 (hypothetical protein SDJN03_21424, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 465.7 bits (1197), Expect = 4.7e-127
Identity = 249/251 (99.20%), Postives = 249/251 (99.20%), Query Frame = 0


Query: 219 MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 278
           MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA
Sbjct: 1   MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 60

Query: 279 GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 338
           GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL
Sbjct: 61  GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 120

Query: 339 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 398
           VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT
Sbjct: 121 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 180

Query: 399 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 458
           GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRR EQAAARREKLK AYLRKQIE
Sbjct: 181 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRQEQAAARREKLKQAYLRKQIE 240

Query: 459 KLKASSNSGQT 470
           KLKASSNSGQT
Sbjct: 241 KLKASSNSGQT 251

[Close]

BLAST of CmoCh03G013840 vs. NCBI nr
Match: XP_023544345.1 (uncharacterized protein At4g18257-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 461.1 bits (1185), Expect = 1.2e-125
Identity = 246/251 (98.01%), Postives = 247/251 (98.41%), Query Frame = 0


Query: 219 MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 278
           MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKK+KELA
Sbjct: 1   MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKTKELA 60

Query: 279 GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 338
           GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL
Sbjct: 61  GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 120

Query: 339 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 398
           VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDAS PGETDTPEDETEPSFLFNSKTT
Sbjct: 121 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASEPGETDTPEDETEPSFLFNSKTT 180

Query: 399 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 458
           GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELK RR EQAAARREKLK AYLRKQIE
Sbjct: 181 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKFRRQEQAAARREKLKQAYLRKQIE 240

Query: 459 KLKASSNSGQT 470
           KLKASSNSGQT
Sbjct: 241 KLKASSNSGQT 251

[Close]

BLAST of CmoCh03G013840 vs. NCBI nr
Match: XP_022977851.1 (uncharacterized protein At4g18257-like [Cucurbita maxima])

HSP 1 Score: 458.0 bits (1177), Expect = 9.9e-125
Identity = 246/251 (98.01%), Postives = 246/251 (98.01%), Query Frame = 0


Query: 219 MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 278
           MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA
Sbjct: 1   MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 60

Query: 279 GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 338
           GPDVEFHRAKKKIT KDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL
Sbjct: 61  GPDVEFHRAKKKITTKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 120

Query: 339 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPGETDTPEDETEPSFLFNSKTT 398
           VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAP ETDTPEDETEPSFLFNSKTT
Sbjct: 121 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDASAPRETDTPEDETEPSFLFNSKTT 180

Query: 399 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQIE 458
           GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELK RR EQAAARREKLK AYLRKQIE
Sbjct: 181 GLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKFRRQEQAAARREKLKQAYLRKQIE 240

Query: 459 KLKASSNSGQT 470
           KLKASSNSGQT
Sbjct: 241 KLKASSNSGQT 251

[Close]

BLAST of CmoCh03G013840 vs. NCBI nr
Match: XP_008439646.2 (PREDICTED: uncharacterized protein At4g18257 [Cucumis melo])

HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-122
Identity = 243/280 (86.79%), Postives = 258/280 (92.14%), Query Frame = 0


Query: 190 RREEESKQVGHLNSSYFLSSIAPSPLLEKMGEEGKKKRVVVESLGWLTESSIMPKKHKAI 249
           ++EEES+QVG LN SY L SI+PS LL+ M EEGKKKRVVVESLGWLTESSIMPKKHKAI
Sbjct: 45  KKEEESEQVGLLNFSYCLFSISPSLLLKNMEEEGKKKRVVVESLGWLTESSIMPKKHKAI 104

Query: 250 AGVGASSIMELKAHLYKSQEESKKSKELAGPDVEFHRAKKKITPKDLLSSHNSGVEARAL 309
           AGVGASSIMELKAHLYKSQEESKKSKELAGP VEFHRAK KITPKD+LSS NSGVEARAL
Sbjct: 105 AGVGASSIMELKAHLYKSQEESKKSKELAGPGVEFHRAKNKITPKDILSSRNSGVEARAL 164

Query: 310 KDKLELKAIKDGSVSYAALEKKAAIYDKLVKGELSDEEDQEKYCVDFFRKNLEQDESQLP 369
           KDKLELKAI DGSVSYAALEKKAA+Y+KLV GEL DEEDQEKYCVDFFRKNLEQDESQLP
Sbjct: 165 KDKLELKAINDGSVSYAALEKKAALYEKLVNGELPDEEDQEKYCVDFFRKNLEQDESQLP 224

Query: 370 QHHDASAPGETDTPEDETEPSFLFNSKTTGLGRTSGIVDNNEHKRFVREVHEEVNQAREK 429
           Q HDA A GET+TPEDET+  FLFNSK+TGLGRTSG +DN+EHKRFVREVHEEVNQAREK
Sbjct: 225 QGHDAPASGETETPEDETDRPFLFNSKSTGLGRTSGTMDNDEHKRFVREVHEEVNQAREK 284

Query: 430 ASELKLRRHEQAAARREKLKLAYLRKQIEKLKASSNSGQT 470
           ASELKLRR EQAA RREKLK AYLRKQ+EKLKAS+NSGQT
Sbjct: 285 ASELKLRRQEQAAVRREKLKQAYLRKQVEKLKASTNSGQT 324

[Close]

BLAST of CmoCh03G013840 vs. TAIR 10
Match: AT2G34480.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 332.0 bits (850), Expect = 7.6e-91
Identity = 160/178 (89.89%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRS 120
           LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYTEMASRHRVR 
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLVFR VRPP+RKLKTTYKA++PNLF+
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]

BLAST of CmoCh03G013840 vs. TAIR 10
Match: AT3G14600.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 328.6 bits (841), Expect = 8.4e-90
Identity = 158/175 (90.29%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 4   FRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 63
           FRFHQYQVVGRALP+E DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRSPCI 123
           NEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VE MYTEMASRHRVR PCI
Sbjct: 64  NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCI 123

Query: 124 QIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFI 179
           QIIKTATVPAKLCKRE TKQFH+SKIKFPLVFR VRPP+RKLKTTYKAS+PNLF+
Sbjct: 124 QIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

[Close]

BLAST of CmoCh03G013840 vs. TAIR 10
Match: AT1G29965.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 322.4 bits (825), Expect = 6.0e-88
Identity = 155/178 (87.08%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRS 120
           LAINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFI 179
           PCIQIIKTATVPA LCKRESTKQFH+SKIKFPLVFR VRPPTRKLKTT+KA++PNLF+
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

[Close]

BLAST of CmoCh03G013840 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 )

HSP 1 Score: 318.9 bits (816), Expect = 6.7e-87
Identity = 153/172 (88.95%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 7   HQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEI 66
           HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+LAINEI
Sbjct: 141 HQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEI 200

Query: 67  FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRSPCIQII 126
           FEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYTEMASRHRVR PCIQII
Sbjct: 201 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 260

Query: 127 KTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFI 179
           KTATVPA LCKRESTKQFH+SKIKFPLVFR VRPPTRKLKTT+KA++PNLF+
Sbjct: 261 KTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312

[Close]

BLAST of CmoCh03G013840 vs. TAIR 10
Match: AT4G18260.1 (Cytochrome b561/ferric reductase transmembrane protein family )

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-76
Identity = 159/246 (64.63%), Postives = 192/246 (78.05%), Query Frame = 0


Query: 219 MGEEGKKKRVVVESLGWLTESSIMPKKHKAIAGVGASSIMELKAHLYKSQEESKKSKELA 278
           +GEE  KKRVV ESLGWLTESSIMPKKH+AI GVG SSIMELKA LYKSQEE+K++K+  
Sbjct: 290 VGEEETKKRVVTESLGWLTESSIMPKKHRAIEGVGPSSIMELKAQLYKSQEEAKQTKDFT 349

Query: 279 GPDVEFHRAKKKITPKDLLSSHNSGVEARALKDKLELKAIKDGSVSYAALEKKAAIYDKL 338
           G D ++HRAK++I  KD  ++ NSGVE+R LKDKLE KA+KDG+VSYAALEKKA +YDKL
Sbjct: 350 GSDAQYHRAKERIAAKDSFAAKNSGVESRNLKDKLEHKAVKDGAVSYAALEKKAQLYDKL 409

Query: 339 VKGELSDEEDQEKYCVDFFRKNLEQDESQLPQHHDA--SAPGETDTPEDETEPSFLFNSK 398
            +GELSDEE +EKYCVDFFRK ++ ++ +    +++  SAP E D  +D  +   LF++K
Sbjct: 410 ARGELSDEEGEEKYCVDFFRKGIQHEDPKPSSTYNSSISAPPE-DFKQDGEDDGSLFSTK 469

Query: 399 TTGLGRTSGIVDNNEHKRFVREVHEEVNQAREKASELKLRRHEQAAARREKLKLAYLRKQ 458
             GLG   G  D  +H R VREVHEEVNQAREKA+ELK RR EQA  RREKLK AYLRKQ
Sbjct: 470 FAGLGHAIGTADVGQHVRMVREVHEEVNQAREKATELKQRRQEQATNRREKLKQAYLRKQ 529

Query: 459 IEKLKA 463
           +EKLKA
Sbjct: 530 LEKLKA 534

The following BLAST results are available for this feature:

BLAST of CmoCh03G013840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ATF5	6.7e-92	91.57	60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1	[more]
P51418	1.1e-89	89.89	60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=...	[more]
Q9LUD4	1.2e-88	90.29	60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=...	[more]
Q943F3	2.0e-88	88.76	60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE...	[more]
Q8L7K0	8.5e-87	87.08	60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=...	[more]

BLAST of CmoCh03G013840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJN5	5.5e-129	100.00	uncharacterized protein At4g18257-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IL43	4.8e-125	98.01	uncharacterized protein At4g18257-like OS=Cucurbita maxima OX=3661 GN=LOC1114780...	[more]
A0A1S3AZX7	5.8e-123	86.79	uncharacterized protein At4g18257 OS=Cucumis melo OX=3656 GN=LOC103484378 PE=4 S...	[more]
A0A0A0KLY5	2.4e-116	92.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G522800 PE=4 SV=1	[more]
A0A6J1D067	3.1e-116	92.03	uncharacterized protein At4g18257-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CmoCh03G013840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925950.1	1.1e-128	100.00	uncharacterized protein At4g18257-like [Cucurbita moschata]	[more]
KAG6581422.1	4.7e-127	99.20	hypothetical protein SDJN03_21424, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023544345.1	1.2e-125	98.01	uncharacterized protein At4g18257-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977851.1	9.9e-125	98.01	uncharacterized protein At4g18257-like [Cucurbita maxima]	[more]
XP_008439646.2	1.2e-122	86.79	PREDICTED: uncharacterized protein At4g18257 [Cucumis melo]	[more]

BLAST of CmoCh03G013840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34480.1	7.6e-91	89.89	Ribosomal protein L18ae/LX family protein	[more]
AT3G14600.1	8.4e-90	90.29	Ribosomal protein L18ae/LX family protein	[more]
AT1G29965.1	6.0e-88	87.08	Ribosomal protein L18ae/LX family protein	[more]
AT1G29970.2	6.7e-87	88.95	60S ribosomal protein L18A-1	[more]
AT4G18260.1	1.1e-76	64.63	Cytochrome b561/ferric reductase transmembrane protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 443..463
None	No IPR available	COILS	Coil	Coil	coord: 416..436
None	No IPR available	GENE3D	3.10.20.10		coord: 1..71 e-value: 1.9E-37 score: 128.9
None	No IPR available	GENE3D	3.10.20.10		coord: 72..147 e-value: 5.8E-41 score: 140.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..406
None	No IPR available	PANTHER	PTHR10052:SF45	60S RIBOSOMAL PROTEIN L18A	coord: 138..235
None	No IPR available	PANTHER	PTHR10052:SF45	60S RIBOSOMAL PROTEIN L18A	coord: 1..137
None	No IPR available	SUPERFAMILY	160374	RplX-like	coord: 71..146
IPR023573	Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A	PFAM	PF01775	Ribosomal_L18A	coord: 7..128 e-value: 1.1E-53 score: 180.4
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	PANTHER	PTHR10052	60S RIBOSOMAL PROTEIN L18A	coord: 1..137
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	PANTHER	PTHR10052	60S RIBOSOMAL PROTEIN L18A	coord: 138..235
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	HAMAP	MF_00273	Ribosomal_L18Ae	coord: 6..69 score: 24.336386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G013840.1	CmoCh03G013840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome