CmoCh03G013340 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G013340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RAB GTPase homolog A1C
Location	Cmo_Chr03: 9931608 .. 9934430 (-)
RNA-Seq Expression	CmoCh03G013340
Synteny	CmoCh03G013340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAAAATAAAAGGATTTTTACAGCGAGAGAGATAAAGTCGCGCGATCTGAGGAAAACCCTCTTTCTGTGTGTGTGTCTCTCTCTCCCTCTGAATCTCCACGGCTCTGTACCTGAGAGGTCTTCAGCAAAATGTCTGCGTACAGAGCTGAAGACGACTACGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCCAAGTCTACTATTGGGGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGATACCGCTGGCCAAGAACGGTGATCTTTTCCCCTCCTTGCTTTTATTTGCTTTCTATGTTTCTGGTTTTACATTTTATGATCTGGGTCCTTGTCGTTTTAGGTGGAAATATTGTGCGACATACGGGGCTCTGCTCTTGTTTTATTGTTTTTTCTTTCTTGTGTTGCTTCTACTGATTTTGAAATGTGCCTTCCCCTAATATAATTGTTTTTTTTAGCTTCGATTAGTGGTATTTATTATGTTTGTTTGATTTGGGATTATGCTTGTTCCTTTGTTTATTTGGTTCCATAGGTTAGTTGTTGATTGAAATGGGGTACCAGACGGGTTTGGTGGATCTAAAATATTGTTGAGGATTGTTGATGGGGAGTCCCCATCGGCTTATTTAGGGGATAATCATGCGTTGATAGGAAACCAAAAGCAAAGCTATTAGAGTTTATGCTCGAAGTGGGCAATATCATACTATTGTAGAGGTTTGTGATTCCTAACAGAACTTAGGTTACTTATATCTAACCGGATACTTGGTCATCGTGCTATATGCTACCTCGTCCATAAAAAAGCACAGAGAAAGGAACAAGAGAGATAGCAAATCAAGTCTTCCAATCATATTTTCAATATGGAAAGCTTTTTGATAACTCCAAATGCAATTTTGGTTTGGTAATGCATATGCTAGAAACATGTCTTTATGACTTGAAGCAGGAGCCCTCTTCTCTTAAATTGTAACTCAGGCACGATACAAATTGCACAAGCAAATGCGCCCAAAGTTCTTGAGTATGTTAGAAGATTCATTAGCTGTAGTGTGAATTTTCGAAAAGCTTACTGTTTCTTTACTTTTCTCTTCCAAGTAGTTGTCTTTCCATTCTTAGCAATTGTGTTAGTCTCTTCCACCTCTATTATGTAAGTGGTTGAGTGTGGGTTTATAAGTGTCGAGAAAAGTTTACCTCTTCCATTAGTGTTTGGGGTTGAGTATAAGATCCCACATCGGTTGGGGAGGTTTATAAGTGCGTGGAAACCTCTTCCTAGCATACGCGTTTTAAAAACCTTGAAAGGAAGCCTGAAAGAAAAGCTCGAAGAAGATAAAATCCGCTAGCGGTGGGCTTGGGCTGTTACATTAAGAGAGCAAATGAATATCAATTACTGGTATATCAAAGTCAGGTTACAGTAAATCTGTTTAACTGGTTTTGAGAGGTCATGTCTGTGTGAAGATCTATTTCACGGTTTGATGCATATTCCATGTTGATGTAGAGATGGTTGACATGGGGTGTTGTATGAGACTATTTCTATGAGAGCCCACATCGGTTGGAGAGGGGAACGGAGCACTCCTTGTAAGGGTATAGAAACCTAACTTTGAGGGGAAGTCCGGTAGGAAAAGCTAAAAAAGGACAATATTTGCTAGCGGTGGGCTTAGGTGGTTACAGTTTTTGAGGATGACAGAGCCCATTAATGCTAATATCCTAGATGTTCTGCAGCTAAGATTTATGTTCAGTGTCTTGTTTATCTGGAAAAAGTGGCCCAATTCTGTTTTCAACGAGTGAGGGATGGTCATAAAAGATAGTTTAGAGTGAACGGACAGAGTTTAGACTTAGTTTCATCTTAAAATCTGCACTTGCTTTACTTTGCCACATCTCTCGTCTCTGTCACCTTAACTCCTCAAGTTCACAGGTATAGAGCGATTACGAGTGCTTACTATCGAGGAGCTGTTGGTGCCCTGATTGTGTACGACGTTACACGACATTCCACATATGAAAATGTTGAGAAATGGTTAAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAATAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTCTCAACTGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTCTACTTCATGGAAACCTCTGCTCTTGAAGCCATGAACGTGGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCATATAGTGAGCAAGAAGGCTATGGATGCTAGCGACGACGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTCTCCGAGGTCAAGAAAGGCGGTTGCTGTTCCAGCTAAACTACCAATCTGAAGTTGCTGCAGCAGTCAGCCGGTTGTCTCGTCGCTCGACATCTATTTTAACTTTTGTGTTACATATAGTAAGTACACCGTGATGTGAAATTTTTTCCAGGGATGCATAGAGTAGTAGGGGATTCATGGGGATTGGTTTGATGTATCTTAGTGTCTTAACCACTGATACGTTAACTTCTGATGCCAAAAGTACCGATGCTTAAGCTGGTATATTTGCCAGTTGGGAATTACAGTTTATACTCGTTTGACTTTGAGGGAGTTTGTTTCCACGTAGTGAATTGTGAATTGTTATGGACCTTAGTTTCAAGACCAAGATTTGTTTAATCTGTTTGTATGAACTATATCAGTCAACTCCTCCCGGAAGTCAACATCCTTGCTGACACC

mRNA sequence

ATAAAAAATAAAAGGATTTTTACAGCGAGAGAGATAAAGTCGCGCGATCTGAGGAAAACCCTCTTTCTGTGTGTGTGTCTCTCTCTCCCTCTGAATCTCCACGGCTCTGTACCTGAGAGGTCTTCAGCAAAATGTCTGCGTACAGAGCTGAAGACGACTACGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCCAAGTCTACTATTGGGGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGATACCGCTGGCCAAGAACGGTATAGAGCGATTACGAGTGCTTACTATCGAGGAGCTGTTGGTGCCCTGATTGTGTACGACGTTACACGACATTCCACATATGAAAATGTTGAGAAATGGTTAAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAATAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTCTCAACTGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTCTACTTCATGGAAACCTCTGCTCTTGAAGCCATGAACGTGGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCATATAGTGAGCAAGAAGGCTATGGATGCTAGCGACGACGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTCTCCGAGGTCAAGAAAGGCGGTTGCTGTTCCAGCTAAACTACCAATCTGAAGTTGCTGCAGCAGTCAGCCGGTTGTCTCGTCGCTCGACATCTATTTTAACTTTTGTGTTACATATAGTAAGTACACCGTGATGTGAAATTTTTTCCAGGGATGCATAGAGTAGTAGGGGATTCATGGGGATTGGTTTGATGTATCTTAGTGTCTTAACCACTGATACGTTAACTTCTGATGCCAAAAGTACCGATGCTTAAGCTGGTATATTTGCCAGTTGGGAATTACAGTTTATACTCGTTTGACTTTGAGGGAGTTTGTTTCCACGTAGTGAATTGTGAATTGTTATGGACCTTAGTTTCAAGACCAAGATTTGTTTAATCTGTTTGTATGAACTATATCAGTCAACTCCTCCCGGAAGTCAACATCCTTGCTGACACC

Coding sequence (CDS)

ATGTCTGCGTACAGAGCTGAAGACGACTACGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCCAAGTCTACTATTGGGGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGATACCGCTGGCCAAGAACGGTATAGAGCGATTACGAGTGCTTACTATCGAGGAGCTGTTGGTGCCCTGATTGTGTACGACGTTACACGACATTCCACATATGAAAATGTTGAGAAATGGTTAAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAATAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTCTCAACTGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTCTACTTCATGGAAACCTCTGCTCTTGAAGCCATGAACGTGGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCATATAGTGAGCAAGAAGGCTATGGATGCTAGCGACGACGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTCTCCGAGGTCAAGAAAGGCGGTTGCTGTTCCAGCTAA

Protein sequence

MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIVIMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSKKAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

Homology

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BLAST of CmoCh03G013340 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.8e-101
Identity = 188/218 (86.24%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE WLKELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEA NV+NAFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A+ ++A   V +KG+KIDI KDVS VKKGGCCS+
Sbjct: 181 KAMEAASESA--NVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of CmoCh03G013340 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-98
Identity = 183/218 (83.94%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALE+ NV+NAF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A +D  +  V +KGEKID+  DVS VKK GCCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

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BLAST of CmoCh03G013340 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 359.0 bits (920), Expect = 3.8e-98
Identity = 180/216 (83.33%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 2   SAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKV 61
           + YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSL +DGKV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIVI 121
           +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WLKELRDHTDPNIV+
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSKK 181
           MLVGNKSDLRHLVAV T++ K+FAE ESLYFMETSALE+ NV+NAFAEVLTQIY IVSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 AMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCS 218
           +++A DDA +     KGEKI+I  DVS VKKGGCCS
Sbjct: 183 SVEAGDDAGSGP--GKGEKINIKDDVSAVKKGGCCS 216

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BLAST of CmoCh03G013340 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.4e-94
Identity = 173/218 (79.36%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT+SLN+D K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TYENV +WLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +ML+GNKSDLRHLVAVST++AK  AE E LYFMETSALEA NV+NAF E LTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KA++A D+ A S+   KGE I+I  + S  KK GCCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-92
Identity = 171/218 (78.44%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR +T+ENV++WLKEL++HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHL+AV TED KS+AE ESL FMETSALEA NV++AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           K ++A +D  AS  + KGEKI++  DVS +KK GCCS+
Sbjct: 181 KQVEAGEDGNAS--VPKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of CmoCh03G013340 vs. ExPASy TrEMBL
Match: A0A6J1IU78 (ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111478625 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK
Sbjct: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. ExPASy TrEMBL
Match: A0A6J1EK42 (ras-related protein RABA1c-like OS=Cucurbita moschata OX=3662 GN=LOC111433325 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK
Sbjct: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. ExPASy TrEMBL
Match: A0A5D3CP64 (Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008350 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.8e-112
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. ExPASy TrEMBL
Match: E5GC30 (GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.8e-112
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. ExPASy TrEMBL
Match: A0A0A0KNM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.8e-112
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. NCBI nr
Match: XP_022926120.1 (ras-related protein RABA1c-like [Cucurbita moschata] >XP_022978763.1 ras-related protein RABA1c-like [Cucurbita maxima] >XP_023544519.1 ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG6581369.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK
Sbjct: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. NCBI nr
Match: XP_038892728.1 (ras-related protein RABA1c-like [Benincasa hispida])

HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112
Identity = 213/218 (97.71%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A+DDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMEANDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. NCBI nr
Match: XP_004134652.1 (ras-related protein RABA1c [Cucumis sativus] >XP_008439722.1 PREDICTED: ras-related protein RABA1c-like [Cucumis melo] >ADN34029.1 GTP-binding protein [Cucumis melo subsp. melo] >KAA0052607.1 ras-related protein RABA1c [Cucumis melo var. makuwa] >KGN49321.1 hypothetical protein Csa_002721 [Cucumis sativus] >TYK13220.1 ras-related protein RABA1c [Cucumis melo var. makuwa])

HSP 1 Score: 413.7 bits (1062), Expect = 9.9e-112
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. NCBI nr
Match: XP_022142300.1 (ras-related protein RABA1c [Momordica charantia])

HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110
Identity = 210/218 (96.33%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLD K
Sbjct: 1   MAAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ASDDAAASAV+AKGEKIDISKDVS VKKGGCCSS
Sbjct: 181 KAMEASDDAAASAVVAKGEKIDISKDVSAVKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. NCBI nr
Match: XP_023518462.1 (ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.1 bits (1019), Expect = 9.6e-107
Identity = 199/218 (91.28%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++DG+
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH+TYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAV TEDAKSFAETES+YFMETSALE+ NVDNAF EVL QIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+AS+DAAAS VLAKGE+IDISKDVSE+KKGGCCSS
Sbjct: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218

[Close]

BLAST of CmoCh03G013340 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 368.6 bits (945), Expect = 3.4e-102
Identity = 188/218 (86.24%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE WLKELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEA NV+NAFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A+ ++A   V +KG+KIDI KDVS VKKGGCCS+
Sbjct: 181 KAMEAASESA--NVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of CmoCh03G013340 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-99
Identity = 183/218 (83.94%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALE+ NV+NAF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A +D  +  V +KGEKID+  DVS VKK GCCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of CmoCh03G013340 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 340.9 bits (873), Expect = 7.6e-94
Identity = 171/218 (78.44%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR +T+ENV++WLKEL++HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHL+AV TED KS+AE ESL FMETSALEA NV++AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           K ++A +D  AS  + KGEKI++  DVS +KK GCCS+
Sbjct: 181 KQVEAGEDGNAS--VPKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of CmoCh03G013340 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 337.8 bits (865), Expect = 6.5e-93
Identity = 171/220 (77.73%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH T+ENVE+WLKELRDHTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           IM VGNK+DLRHL AVSTEDAK+FAE E+ +FMETSALE+MNV+NAF EVL+QIY +VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISK--DVSEVKKGGCCSS 219
           KA+D  DD AA   L KG+ I++    DVS VKK GCCS+
Sbjct: 181 KALDIGDDPAA---LPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of CmoCh03G013340 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-92
Identity = 170/220 (77.27%), Postives = 196/220 (89.09%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+DDYD+L+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH T+ENVE+WLKELRDHT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           IMLVGNK+DLRHL AVSTEDAK+FAE E+ +FMETSALEA+NV+NAF EVL+QIY + SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISK--DVSEVKKGGCCSS 219
           KA+D  DD      L KG+ I++    DVSEVKK GCCSS
Sbjct: 181 KALDIGDD---HTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

The following BLAST results are available for this feature:

BLAST of CmoCh03G013340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK68	4.8e-101	86.24	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]
Q9SN35	2.2e-98	83.94	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]
P40393	3.8e-98	83.33	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]
Q01111	4.4e-94	79.36	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q39222	1.1e-92	78.44	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]

BLAST of CmoCh03G013340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IU78	1.4e-114	100.00	ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111478625 PE=4...	[more]
A0A6J1EK42	1.4e-114	100.00	ras-related protein RABA1c-like OS=Cucurbita moschata OX=3662 GN=LOC111433325 PE...	[more]
A0A5D3CP64	4.8e-112	96.79	Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GC30	4.8e-112	96.79	GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KNM1	4.8e-112	96.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1	[more]

BLAST of CmoCh03G013340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926120.1	2.8e-114	100.00	ras-related protein RABA1c-like [Cucurbita moschata] >XP_022978763.1 ras-related...	[more]
XP_038892728.1	2.0e-112	97.71	ras-related protein RABA1c-like [Benincasa hispida]	[more]
XP_004134652.1	9.9e-112	96.79	ras-related protein RABA1c [Cucumis sativus] >XP_008439722.1 PREDICTED: ras-rela...	[more]
XP_022142300.1	1.1e-110	96.33	ras-related protein RABA1c [Momordica charantia]	[more]
XP_023518462.1	9.6e-107	91.28	ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-r...	[more]

BLAST of CmoCh03G013340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45750.1	3.4e-102	86.24	RAB GTPase homolog A1C	[more]
AT4G18800.1	1.6e-99	83.94	RAB GTPase homolog A1D	[more]
AT1G16920.1	7.6e-94	78.44	RAB GTPase homolog A1B	[more]
AT5G60860.1	6.5e-93	77.73	RAB GTPase homolog A1F	[more]
AT3G15060.1	1.1e-92	77.27	RAB GTPase homolog A1G	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 53.93 coord: 117..130 score: 56.59 coord: 152..174 score: 39.85 coord: 37..53 score: 36.77 coord: 14..35 score: 55.22
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..210 e-value: 4.4E-8 score: 42.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 4.9E-111 score: 384.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 3.5E-24 score: 96.3
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..218
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 1..218
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..186 score: 10.642385
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..216 score: 35.186878
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 5.36923E-127 score: 353.403
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 4.8E-13 score: 46.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 3.2E-61 score: 205.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..218 score: 15.984079
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 3.9E-41 score: 138.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..216 e-value: 4.0E-72 score: 243.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G013340.1	CmoCh03G013340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding