CmoCh03G012740 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G012740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type domain-containing protein
Location	Cmo_Chr03: 9697346 .. 9702602 (+)
RNA-Seq Expression	CmoCh03G012740
Synteny	CmoCh03G012740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTTTATCAATCTGATGCCGTGGAAATTTGGTTTGTTGAAAGAAAAACCACGAACACGAGGCTCCCTCCCCCCTTTGGCTCTGCCATTTTGCTACACCGCCCCCTTCATCATCTCTACCAACGTCAATTTTGGTGAACTTGCAACTTCTTTTCGTCGTTTCTTCAACTTATTTTGCTTCAACCCAAAACAATGCCGGCTCGGAAGCGCGTTTACGAGACTGTTCATGCTGATCTTTTGCCGCGACTCCATGATACCTTCAATGATCGCTCTGAGGATGGAGAATCTGAAGGTACGCTTCTTTTTCTGCTTAGCACCCTAAATTTTCATGATGCAACCCAATCTTTTATGTTCCTGCATTCCATATATGTTATTATTTGTTTGTTTAATTCTTTTTTTGTGCGTATACTGAGTTCCTGGTGTTCTATGTTGCTTCTTCTTTCTACAGAATCCGATCGAAGCTCTTCATCCAGTCAAGAAGATAAGGACGAGTATGTTCCGTTTATTATGAGCTCTGTTTTTGGTTTGCTTCTTTTTGTTCGTCATCTTCTTCGCGCTGTTCCTTTTTACTCTATTTTCTCTTTTGACTTATTTCATCTGGTTGGTTATGGAGTTCTTTGGTGCTTAACTGCCTGGGATTGTTTTGGGATCTGCATGGTCTGCTTCGTGGTATTGTTCAGTAAGTTCTTGCTACGACCGTCTTCGAAGACCAGCTGTGTAGTCTTCACGTCTGAGGCTTTCGTCGGTTTTTATCCTGCAACGGAGTTTTCTTTATTTTTAGTTTTAGTTTCTTTTCCGATTAAGGTTAGTGGAATTGGGTGCTGGATCTTGTTGGCTAAGTAGGTTCTTGAGGTCGTATATGCGATCAATCTGTTTTTACATATGCTACGAGTTGCTGGGTGGGTAATGACGTTGGAGCTCACATGGTTTTAGCTTCTCTACCATGTTAAAGCTCACATGATCCGAGATCAAGCATTCACTCAACGTGGAATCAAGCTTACTGTAACTGAAGTTTTCACGGAAAAAACTTGCTAATTCCCGCCATTCATCGTTGGATCCAATTTTACGCAAATACCGAAAAGTTAACGACGGGAAACCCGACATTCCATTAAGAACGATTTTACCCAAAATTTTGACAACTTGAGCGGTACTCTTCCGCTAGTTCGATGAACGAACTATTTGGGCGGGTTGCGTTGTAGAATATATGTGGCCGAATTAAAAGTTGTTTCTCGGTTGTTTAGTTGCCTGGTGAACGGTATAGCACGATCTCAGATGTCTTGCCATTGTTCCGACATGCTAAATCTTCTGTCTGATTTTATTTTCCAGATTTGTAGCCGTGAAGTTGTCAGACATTCGGAGAGACGTGCAATGTCCTATTTGCTTAGGTATGTTTTAATAATCCTTGGTGAACCTATTATCTCAAATAAGACAAAATTACTATTGATTTGAACATTTGGTTTTATTCTTTATACAATTCATATTCTTAAAGGCCTAAACACGCATACTACAAACAATCTTGCTGTTTAATATTGGTGTCAGCGTGTCATCCAGGCCTTTACTGATTTTAACAAGTAAGATTGTTGTCATATCTTGAGTTTGAATTGTAAAGAGACGTTTTGTTGTCATATCAATCATATTATATGATGAACTTATTTTTGTTAGTATAAATGTACATATGCACTGTAAGATACCTAGCAGTAAGGTTATTTGAAAAGCTTGATTTGTCCGGGATGAAATGTGAAGAATGAGAGGATTAATTTTTATGAAGTGTTGAATCAAGTGCCACCGGCCCATCTGATCTAAGAACCTTTTCTGATGTAACAAAATTGATTTTTTTGTATATAAGTTGTGTCAGAGAACTTAAATCAATTCTGATGTAACCAACCTGAGATTTGCATTCCACTGTCACAAAATTCCGAATCTGGGAGCGATAGCAAGAATTTAAATCTCAGGTTGGTTCTTTATATGGACTGTTGATTTAGAAATGGATTCTGATGTGGCTTCTTTATCAAATTATGAACGCATACAGTTCATTCTTCACATATTTGCTTTGACTTAGAAAGGTTATCAGTGTAAGTTGTCGCCCCCCACCCCCCATGGGCCTTACATATAATTCTAACTCTAAAATGATAGCATTTTTTCGGCTCCATGGACCTTTGAACGTGTGTTTATATTTTAGGCGACACTAATAATTGCCATCCTTCTGCTTTTCTTATTCCCCACAAGTAAATTAGAAGTTAAGATGACAAACTTTTCCTCCTTCACTTGTTTGTCCTAACATGGACTTTGTTATGGAGTTTTGCATTTTGTGATTAGGGAGTTCCTTCAAAGAGTAACTAATTGGACCATAGAGGGAGTGAATTCTTGAGCATATGAGGTTATGGAATTTGGTTTTCATTTATTTTCTTTTGGTGTTCTGCCTGATCAAATCTTACCGTTCAGGCTACATATAAGTTCATTTGGAGGCACTGCTTTTATGATAGTGTTGCATGTATACACATAACAATTAGTGAATTTATGCATCAACTCGTTACTCAAGCTCATATTGTAAAGTTTCTTGATCCTTACTTTCAGTTCATGCACACACAGCTATCTGATAAAGGCAACACCAAAGAATCTTTTTTTTCCCCATAAAAAAATAACTAAATTCCAAATCAAAACATTCATGAAAATTGACATTTTTAGTGGATGTATCCAAATACTATGAGCAATGACATTCTAAATGTTAGCATTCTTGGGAAATATATTTAGGTGGATTTGGTGAGGAAACCACAAAGCTTACGTAGGAAGGTCATCTCCATGTTTATGCATGCATAGTCTTCTTAGGAGATCGATAAAAGTTTTTCAATTCCTAATGTGCAGGAATCATCAGAAAAACCAGAACAGTGATGGAATGTCTGCACCGCTTCTGCAGGGAATGCATTGACAAATCAATGCGTTTAGGGTATGTTCTTATGTAGTTTTTATTTTGATTTTGCTAATTTCTGTACAGCTCAAGAAATTAAAGATATATTGTTGCACAATTTTCCTTCAACCAAATTGTTACTGAAATTTGCTGCAGTAACAATGAGTGCCCTGCTTGCCGCACTCATTGTGCCAGTCGACGCTCTTTGAGAGATGATCCAAATTTTGATACCTTAATTGCTGTGTTGTATCCAGATATCGACAAATATGAGGAGGAGGTGGGAATATTATGTTTTATCATGCAAGCTTGGTGTTTGATGATTGTTATCGTCATTTCTGCATACTCCAATATTAATTTATATTTTTTTTTTTGTAGGAACTAGCTTTTCAGGAAGAAGAGAAAGCTCGTAATAAGCAGGTGAGAGGGCTAAGTTTTGAGGATTATTTTTTTTTATGGACATGCATTTGTTCATTTTCCAGAGTTGATGAGCTCACTTGACATTGTTCAATGTTCAAGACTCCACTGATTTTATCAGGCTGAAATTGATTAAAAGAGAGAGGAATTATTTGAATCATTATTTGATAAATATTTAATGCAAAGTTGTGGGAGCATCGGGATACGAAATAGGAGCATGTTTTTCTTAGTTGTTGTGTTTTTCGATTCCATTTGACTTGGAAACATCTCGTGCTGAAAATCAGCATGGCTATTATCGATTGTACTTGTATCAGGTATCTTTATCACACTTGATTGTTCTATCTTCATATTTGGTCTAAAATTGCTACTTTTCGGTTATTTTGCAGATCCAATCTTCCATTGCTCAGACACTTAAACGACAAACTGAAGCTTTGGGTCGTAAACGTTCAAAACCTTTGAGGAGATTAAGTTCTAGAGGACGAAAAAGCTTCCAAAATCATATTGAGAGTCTAAGCTTTGATGAAAACGAGGACGAAAATGATTATGATGCCAGCAAAAATTCATCTTCTGCTGATGAGCGTATGGATACTAGACCTAATAAAAGATCCAGGAGAGGTGGTCCTGTTAGATTTTCCCAGTCTTCCTCAGCTACTGGAGCAGACGGAGCAGATGGTGGCAGTAACGAAAATGATTATGAAGTGAACAAAGAAAGAGTTGGTGCATCGATGGGGCTTGTTAGTAGCTCAGAAAAACTTTCTTGGGGCAAAGGTGGAATAAGGAGTCACACTAGATATGGGGGTATTAATGGGGGTGGCGGTAAAATTTCCAGGAATAACCGCATCACCAAGCTGTCAGATTATGTTCGAAACTCGGAAAATATCAGTGAGGAGGAGGTAAAAACGACAATTTGAGTTGTTACTAAACTTCCTTATGAATAAACTATGGACATGTTAACGTATAAATGGCTCGCCTATTGAATGACATGCATGCTGCTATACCTCTTGTAGCTGCTTAAAAGCCCAACGTTGCTTTATTGTTTCTATCCATCAATGACTTTTGGCTTCTCTTCCTGAATCTTAGTTGGACGTCCAGCTTATGCTCGTTTCCATGGATAAAACTAGAATACCCGCGTTGCGAAGTTCATATATTTGCTGCAGGCCATCAGTGACGATTGGACACCTACGTCAAGTAATCTTTCATTAAATGGACAGCACTTGCACTTCATCCAATTATTTAGTTGATTCTTGAGCTTCCTTTCTTCTGCAGTTGGTTGCTCTTGAAACCGCACTTTCAGTTGATGTCATTGAAATGTACGTGGTGAAAGAGCTGCAAATGAAAATCAATCCTTCAACCTCGGGAACTTTTCTGGACCCATGTAAAGAAAGTGCACAGATATTAAACCAGCAAGAAACGCTATCGATGGACAAACTCAAAACACACCGGCTAGCTTGTGGCTATCTGGTATGCCTTGAACCTACACCACACAAATGCTTGAAAACAGTGCACCCACTACTTGAATAAGCATTTGTATAAGCCTTTTATACAACATTTTAAGCTTGTTGCCTTGATTCCAGCTTTTGGCATATCAGAAAAAGGGCTAGAGTTCTGTGAAGACGAATTTGTTTGGCTAAGAAGAAAAAGGCCATCAAACCTTCATATGCAGACAGACATACGGTGCTTACTACCAGTTCATCCTTGAAATGAAGATTTAGGTAAATTTCCATACATGTGTCGATTAAAGATATCAAATGCTTTAAGAAGTTCCAACTCCATGTCTTCCCCCATCTGAATGTGTTGTTATCTAACCACCTCCATTAGCTATTGGGTTTCCTCTTTCGCCTGTGCAATTCTCATCATCCTTGCAGTATTTAACTGAGGCGATACTGATAAAAGCTGTGATGGGGAATATAGATACCATGAAATATGGATGGCTTTGA

mRNA sequence

TTTCTTTTATCAATCTGATGCCGTGGAAATTTGGTTTGTTGAAAGAAAAACCACGAACACGAGGCTCCCTCCCCCCTTTGGCTCTGCCATTTTGCTACACCGCCCCCTTCATCATCTCTACCAACGTCAATTTTGGTGAACTTGCAACTTCTTTTCGTCGTTTCTTCAACTTATTTTGCTTCAACCCAAAACAATGCCGGCTCGGAAGCGCGTTTACGAGACTGTTCATGCTGATCTTTTGCCGCGACTCCATGATACCTTCAATGATCGCTCTGAGGATGGAGAATCTGAAGAATCCGATCGAAGCTCTTCATCCAGTCAAGAAGATAAGGACGAATTTGTAGCCGTGAAGTTGTCAGACATTCGGAGAGACGTGCAATGTCCTATTTGCTTAGGAATCATCAGAAAAACCAGAACAGTGATGGAATGTCTGCACCGCTTCTGCAGGGAATGCATTGACAAATCAATGCGTTTAGGTAACAATGAGTGCCCTGCTTGCCGCACTCATTGTGCCAGTCGACGCTCTTTGAGAGATGATCCAAATTTTGATACCTTAATTGCTGTGTTGTATCCAGATATCGACAAATATGAGGAGGAGGAACTAGCTTTTCAGGAAGAAGAGAAAGCTCGTAATAAGCAGATCCAATCTTCCATTGCTCAGACACTTAAACGACAAACTGAAGCTTTGGGTCGTAAACGTTCAAAACCTTTGAGGAGATTAAGTTCTAGAGGACGAAAAAGCTTCCAAAATCATATTGAGAGTCTAAGCTTTGATGAAAACGAGGACGAAAATGATTATGATGCCAGCAAAAATTCATCTTCTGCTGATGAGCGTATGGATACTAGACCTAATAAAAGATCCAGGAGAGGTGGTCCTGTTAGATTTTCCCAGTCTTCCTCAGCTACTGGAGCAGACGGAGCAGATGGTGGCAGTAACGAAAATGATTATGAAGTGAACAAAGAAAGAGTTGGTGCATCGATGGGGCTTGTTAGTAGCTCAGAAAAACTTTCTTGGGGCAAAGGTGGAATAAGGAGTCACACTAGATATGGGGGTATTAATGGGGGTGGCGGTAAAATTTCCAGGAATAACCGCATCACCAAGCTGTCAGATTATGTTCGAAACTCGGAAAATATCAGTGAGGAGGAGTTGGTTGCTCTTGAAACCGCACTTTCAGTTGATGTCATTGAAATGTACGTGGTGAAAGAGCTGCAAATGAAAATCAATCCTTCAACCTCGGGAACTTTTCTGGACCCATGTAAAGAAAGTGCACAGATATTAAACCAGCAAGAAACGCTATCGATGGACAAACTCAAAACACACCGGCTAGCTTGTGGCTATCTGTATTTAACTGAGGCGATACTGATAAAAGCTGTGATGGGGAATATAGATACCATGAAATATGGATGGCTTTGA

Coding sequence (CDS)

ATGCCGGCTCGGAAGCGCGTTTACGAGACTGTTCATGCTGATCTTTTGCCGCGACTCCATGATACCTTCAATGATCGCTCTGAGGATGGAGAATCTGAAGAATCCGATCGAAGCTCTTCATCCAGTCAAGAAGATAAGGACGAATTTGTAGCCGTGAAGTTGTCAGACATTCGGAGAGACGTGCAATGTCCTATTTGCTTAGGAATCATCAGAAAAACCAGAACAGTGATGGAATGTCTGCACCGCTTCTGCAGGGAATGCATTGACAAATCAATGCGTTTAGGTAACAATGAGTGCCCTGCTTGCCGCACTCATTGTGCCAGTCGACGCTCTTTGAGAGATGATCCAAATTTTGATACCTTAATTGCTGTGTTGTATCCAGATATCGACAAATATGAGGAGGAGGAACTAGCTTTTCAGGAAGAAGAGAAAGCTCGTAATAAGCAGATCCAATCTTCCATTGCTCAGACACTTAAACGACAAACTGAAGCTTTGGGTCGTAAACGTTCAAAACCTTTGAGGAGATTAAGTTCTAGAGGACGAAAAAGCTTCCAAAATCATATTGAGAGTCTAAGCTTTGATGAAAACGAGGACGAAAATGATTATGATGCCAGCAAAAATTCATCTTCTGCTGATGAGCGTATGGATACTAGACCTAATAAAAGATCCAGGAGAGGTGGTCCTGTTAGATTTTCCCAGTCTTCCTCAGCTACTGGAGCAGACGGAGCAGATGGTGGCAGTAACGAAAATGATTATGAAGTGAACAAAGAAAGAGTTGGTGCATCGATGGGGCTTGTTAGTAGCTCAGAAAAACTTTCTTGGGGCAAAGGTGGAATAAGGAGTCACACTAGATATGGGGGTATTAATGGGGGTGGCGGTAAAATTTCCAGGAATAACCGCATCACCAAGCTGTCAGATTATGTTCGAAACTCGGAAAATATCAGTGAGGAGGAGTTGGTTGCTCTTGAAACCGCACTTTCAGTTGATGTCATTGAAATGTACGTGGTGAAAGAGCTGCAAATGAAAATCAATCCTTCAACCTCGGGAACTTTTCTGGACCCATGTAAAGAAAGTGCACAGATATTAAACCAGCAAGAAACGCTATCGATGGACAAACTCAAAACACACCGGCTAGCTTGTGGCTATCTGTATTTAACTGAGGCGATACTGATAAAAGCTGTGATGGGGAATATAGATACCATGAAATATGGATGGCTTTGA

Protein sequence

MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRGRKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGADGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNRITKLSDYVRNSENISEEELVALETALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLYLTEAILIKAVMGNIDTMKYGWL

Homology

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BLAST of CmoCh03G012740 vs. ExPASy Swiss-Prot
Match: Q9FKW0 (Putative E3 ubiquitin-protein ligase RING1a OS=Arabidopsis thaliana OX=3702 GN=RING1A PE=1 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 3.1e-69
Identity = 167/333 (50.15%), Postives = 219/333 (65.77%), Query Frame = 0


Query: 25  DRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFC 84
           +  E+ E +  +RS SS   D+ EF+ + L +IR+DVQCPICLGII+KTRTVMECLHRFC
Sbjct: 98  EEEEEEEEDSKERSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFC 157

Query: 85  RECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEK 144
           RECIDKSMRLGNNECPACR HCASRRSLRDDP FD LIA L+ +ID YEEEELAF E+E 
Sbjct: 158 RECIDKSMRLGNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEM 217

Query: 145 ARNKQIQSSIAQTLKRQTEALGRKRS----------KPLRRLSSRGRKSF-----QNHIE 204
           ARNKQIQ+SIAQ  +RQ+EAL ++RS           P     SR R++      QN  E
Sbjct: 218 ARNKQIQASIAQISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRRNSRNMEQQNASE 277

Query: 205 SLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGADGADGGSNE 264
           +   D+N+D N+    K+SSS +   + R  KR +R    R +Q  S++GA+  +G   +
Sbjct: 278 AHEDDDNDDNNNRGRDKDSSSDERGTEVRQKKRRKR-STSRSTQHPSSSGANKNNGNCAD 337

Query: 265 NDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYG-GINGGGGKISRNNRITKLSDYV 324
           ND EV ++  G S GLV + E L+WG+GG RS+TR+G   +GG  K  RN R+ KL +Y+
Sbjct: 338 NDTEVYRDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYL 397

Query: 325 RNSENISEEE------LVALETALSVDVIEMYV 336
           R+S + S  E      LV+L+T    D+ + Y+
Sbjct: 398 RSSVDGSSVELDIHVKLVSLDTKCIPDLPQPYL 429

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BLAST of CmoCh03G012740 vs. ExPASy Swiss-Prot
Match: Q0WX00 (Putative E3 ubiquitin-protein ligase RING1b OS=Arabidopsis thaliana OX=3702 GN=RING1B PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.6e-57
Identity = 153/323 (47.37%), Postives = 212/323 (65.63%), Query Frame = 0


Query: 28  EDGESEESDRSSSSSQEDKDEFVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCREC 87
           E+ +S+E  +SSS+ +  + E++ V L+DI +DVQC ICLGIIRKTRTVMECLHRFCREC
Sbjct: 68  EEEDSKERSQSSSAGELSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCREC 127

Query: 88  IDKSMRLGNNECPACRTHCASRRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEKARN 147
           IDKSMRLGNNECP CR HCASRRSLRDDPNFD LIA L+ +IDK+EEEEL F+++++ARN
Sbjct: 128 IDKSMRLGNNECPTCRKHCASRRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARN 187

Query: 148 KQIQSSIAQTLKRQTEALGRKRS--KPLRRLS--------SRGRKSFQNHIESLSFDENE 207
           KQIQ+SIAQ  +RQ++AL +++S  K    LS        SR R++ +N IE  + + N+
Sbjct: 188 KQIQASIAQVSQRQSKALVKRKSVGKGTAILSRSRRSGGGSRRRRNCRN-IEQDTSEAND 247

Query: 208 DENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGADGADGGSNENDYEVNKE 267
           D++     K+SSS DE     P +R R+        SS+A   D   G   E  ++ +  
Sbjct: 248 DDDQNKRGKDSSS-DE-----PCERQRKKRSATQPSSSNANNNDNCAGNGTEQTHQRDSR 307

Query: 268 RVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNRITKLSDYVRNSENISEE 327
            +  S  LV +SE ++WG+GG RS+TR G  N  G    RN R+ +L +Y+ + E  S E
Sbjct: 308 VI--SPVLVWNSELIAWGRGGTRSNTRQGN-NNQGAISKRNARLKRLVEYLGSLEGNSVE 367

Query: 328 -----ELVALETALSVDVIEMYV 336
                +LV+L+T   +++ E Y+
Sbjct: 368 LDIHLKLVSLDTEGLLNLHEPYL 380

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BLAST of CmoCh03G012740 vs. ExPASy Swiss-Prot
Match: Q7ZWM8 (E3 ubiquitin-protein ligase RING2-B OS=Xenopus laevis OX=8355 GN=rnf2-b PE=2 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 5.0e-19
Identity = 89/272 (32.72%), Postives = 132/272 (48.53%), Query Frame = 0


Query: 50  VAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 109
           +AV    +  ++ CPICL +++ T T  ECLHRFC +CI  ++R GN ECP CR    S+
Sbjct: 34  IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 93

Query: 110 RSLRDDPNFDTLIAVLYPDIDKYE-EEELAFQEEEKARNKQ-IQSSIAQTLKRQTEALGR 169
           RSLR DPNFD LI+ +YP  D+YE  ++    +  +  N+Q + SSI + LK Q  A+ R
Sbjct: 94  RSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGLKMQ--AMHR 153

Query: 170 KRSKPLRRLSSRGRKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGG 229
                    + R RK  Q+  ++ +F   ED  D  +  ++ S     +  P+++  R  
Sbjct: 154 ---------AQRVRK-HQHESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAGPSRKRSRA- 213

Query: 230 PVRFSQSSSATGADGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGG 289
               S+ S A      +GG    D     E  G+ + LV  +  L   K G  S TRY  
Sbjct: 214 ----SEDSGAEPDLSHEGGVRSPDPPGGGEN-GSEIELVFRAHPLLVEKDGY-SQTRY-- 273

Query: 290 INGGGGKISRNNRITKLSDYVRNSENISEEEL 320
                 K + N  +  LS Y+     + EE L
Sbjct: 274 -----VKTTANATVDHLSKYLALRIALEEEAL 279

[Close]

BLAST of CmoCh03G012740 vs. ExPASy Swiss-Prot
Match: Q66J69 (E3 ubiquitin-protein ligase RING2-A OS=Xenopus laevis OX=8355 GN=rnf2-a PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.6e-19
Identity = 89/272 (32.72%), Postives = 132/272 (48.53%), Query Frame = 0


Query: 50  VAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 109
           +AV    +  ++ CPICL +++ T T  ECLHRFC +CI  ++R GN ECP CR    S+
Sbjct: 35  IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94

Query: 110 RSLRDDPNFDTLIAVLYPDIDKYE-EEELAFQEEEKARNKQ-IQSSIAQTLKRQTEALGR 169
           RSLR DPNFD LI+ +YP  D+YE  ++    +  +  N+Q + SSI + LK Q  A+ R
Sbjct: 95  RSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLNRLHNQQALSSSIEEGLKMQ--AMHR 154

Query: 170 KRSKPLRRLSSRGRKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGG 229
                    + R RK  Q+  ++ +F   ED  D  +  ++ S     +  P+++  R  
Sbjct: 155 ---------AQRVRK-HQHESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAGPSRKRSRA- 214

Query: 230 PVRFSQSSSATGADGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGG 289
               S+ S A      +GG    D     E  G+ + LV  +  L   K G  S TRY  
Sbjct: 215 ----SEDSGAEPDLSHEGGVRSPDPPGGGE-TGSEIELVFRAHPLLVEKDGY-SQTRY-- 274

Query: 290 INGGGGKISRNNRITKLSDYVRNSENISEEEL 320
                 K + N  +  LS Y+     + EE L
Sbjct: 275 -----VKTTANATVDHLSKYLALRIALEEEVL 280

[Close]

BLAST of CmoCh03G012740 vs. ExPASy Swiss-Prot
Match: Q5TJF3 (E3 ubiquitin-protein ligase RING1 OS=Canis lupus familiaris OX=9615 GN=RING1 PE=3 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-18
Identity = 67/204 (32.84%), Postives = 100/204 (49.02%), Query Frame = 0


Query: 50  VAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 109
           +AV    +  ++ CPICL +++ T T  ECLHRFC +CI  ++R GN ECP CR    S+
Sbjct: 35  IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94

Query: 110 RSLRDDPNFDTLIAVLYPDIDKYE--EEELAFQEEEKARNKQIQSSIAQTLKRQTEALGR 169
           RSLR DPNFD LI+ +YP  ++YE  ++ +  +       + + SSI + L+ Q     +
Sbjct: 95  RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQ 154

Query: 170 KRSKPLRRLSSRGRKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGG 229
           +  +P+         S          +  E E D +   + S+ D      P KR R GG
Sbjct: 155 RVRRPMPGSDQTTTMS------GGEGEPGEGEGDGEDVSSDSAPDSAPGPAP-KRPRGGG 214

Query: 230 PVRFSQSSSATGADGADGGSNEND 252
               S  +   GA G  GG+   D
Sbjct: 215 AGGSSVGTGGGGAGGVGGGAGSED 231

[Close]

BLAST of CmoCh03G012740 vs. ExPASy TrEMBL
Match: A0A6J1ECT6 (putative E3 ubiquitin-protein ligase RING1a isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433005 PE=4 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 2.1e-201
Identity = 384/421 (91.21%), Postives = 384/421 (91.21%), Query Frame = 0


Query: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60
           MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD
Sbjct: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60

Query: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120
           VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT
Sbjct: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120

Query: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180
           LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG
Sbjct: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180

Query: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240
           RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA
Sbjct: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240

Query: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300
           DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR
Sbjct: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300

Query: 301 ITKLSDYVRNSENISEEE------------------------------------LVALET 360
           ITKLSDYVRNSENISEEE                                    LVALET
Sbjct: 301 ITKLSDYVRNSENISEEELDVQLMLVSMDKTRIPALRSSYICCRPSVTIGHLRQLVALET 360

Query: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLY 386
           ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 
Sbjct: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLL 420

[Close]

BLAST of CmoCh03G012740 vs. ExPASy TrEMBL
Match: A0A6J1EFU8 (putative E3 ubiquitin-protein ligase RING1a isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433005 PE=4 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 2.1e-201
Identity = 384/423 (90.78%), Postives = 384/423 (90.78%), Query Frame = 0


Query: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60
           MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD
Sbjct: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60

Query: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120
           VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT
Sbjct: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120

Query: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180
           LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG
Sbjct: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180

Query: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240
           RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA
Sbjct: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240

Query: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300
           DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR
Sbjct: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300

Query: 301 ITKLSDYVRNSENISEEE------------------------------------LVALET 360
           ITKLSDYVRNSENISEEE                                    LVALET
Sbjct: 301 ITKLSDYVRNSENISEEELDVQLMLVSMDKTRIPALRSSYICCRPSVTIGHLRQLVALET 360

Query: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLY 388
           ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 
Sbjct: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLV 420

[Close]

BLAST of CmoCh03G012740 vs. ExPASy TrEMBL
Match: A0A6J1IQZ1 (putative E3 ubiquitin-protein ligase RING1a isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478584 PE=4 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 6.1e-193
Identity = 373/424 (87.97%), Postives = 376/424 (88.68%), Query Frame = 0


Query: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60
           MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQED+DEFVAVKLSDIRRD
Sbjct: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDEDEFVAVKLSDIRRD 60

Query: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120
           VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT
Sbjct: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120

Query: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180
           LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG
Sbjct: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180

Query: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240
           +KSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSAT  
Sbjct: 181 QKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSAT-- 240

Query: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300
            GADGG NEND EVNKE+VGASMGLVSSSEK SWGKGGIRSHTRYGGINGGGGKISRNNR
Sbjct: 241 -GADGGGNENDCEVNKEKVGASMGLVSSSEKHSWGKGGIRSHTRYGGINGGGGKISRNNR 300

Query: 301 ITKLSDYVRNSENISEEE-------------------------------------LVALE 360
           ITKLSDYVRNSENISEEE                                     LVAL 
Sbjct: 301 ITKLSDYVRNSENISEEEELDVHLMLVSMDKTRIPALRSPYICCRPSVTIGHLRQLVALV 360

Query: 361 TALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 388
           TALSVDVIEMYVVKELQMKINPSTSG FLDPCKESAQILNQQETLSMDKLKTHRLACGYL
Sbjct: 361 TALSVDVIEMYVVKELQMKINPSTSGAFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 420

[Close]

BLAST of CmoCh03G012740 vs. ExPASy TrEMBL
Match: A0A6J1INR9 (putative E3 ubiquitin-protein ligase RING1a isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478584 PE=4 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 6.1e-193
Identity = 373/422 (88.39%), Postives = 376/422 (89.10%), Query Frame = 0


Query: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60
           MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQED+DEFVAVKLSDIRRD
Sbjct: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDEDEFVAVKLSDIRRD 60

Query: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120
           VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT
Sbjct: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120

Query: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180
           LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG
Sbjct: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180

Query: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240
           +KSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSAT  
Sbjct: 181 QKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSAT-- 240

Query: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300
            GADGG NEND EVNKE+VGASMGLVSSSEK SWGKGGIRSHTRYGGINGGGGKISRNNR
Sbjct: 241 -GADGGGNENDCEVNKEKVGASMGLVSSSEKHSWGKGGIRSHTRYGGINGGGGKISRNNR 300

Query: 301 ITKLSDYVRNSENISEEE-------------------------------------LVALE 360
           ITKLSDYVRNSENISEEE                                     LVAL 
Sbjct: 301 ITKLSDYVRNSENISEEEELDVHLMLVSMDKTRIPALRSPYICCRPSVTIGHLRQLVALV 360

Query: 361 TALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 386
           TALSVDVIEMYVVKELQMKINPSTSG FLDPCKESAQILNQQETLSMDKLKTHRLACGYL
Sbjct: 361 TALSVDVIEMYVVKELQMKINPSTSGAFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 419

[Close]

BLAST of CmoCh03G012740 vs. ExPASy TrEMBL
Match: A0A6J1EIS8 (putative E3 ubiquitin-protein ligase RING1a isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111433005 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 9.7e-175
Identity = 336/376 (89.36%), Postives = 336/376 (89.36%), Query Frame = 0


Query: 49  FVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 108
           FVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 7   FVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 66

Query: 109 RRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRK 168
           RRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRK
Sbjct: 67  RRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRK 126

Query: 169 RSKPLRRLSSRGRKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGP 228
           RSKPLRRLSSRGRKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGP
Sbjct: 127 RSKPLRRLSSRGRKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGP 186

Query: 229 VRFSQSSSATGADGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGI 288
           VRFSQSSSATGADGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGI
Sbjct: 187 VRFSQSSSATGADGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGI 246

Query: 289 NGGGGKISRNNRITKLSDYVRNSENISEEE------------------------------ 348
           NGGGGKISRNNRITKLSDYVRNSENISEEE                              
Sbjct: 247 NGGGGKISRNNRITKLSDYVRNSENISEEEELDVQLMLVSMDKTRIPALRSSYICCRPSV 306

Query: 349 -------LVALETALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMD 388
                  LVALETALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMD
Sbjct: 307 TIGHLRQLVALETALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMD 366

[Close]

BLAST of CmoCh03G012740 vs. NCBI nr
Match: XP_022925653.1 (putative E3 ubiquitin-protein ligase RING1a isoform X1 [Cucurbita moschata])

HSP 1 Score: 711.4 bits (1835), Expect = 4.3e-201
Identity = 384/423 (90.78%), Postives = 384/423 (90.78%), Query Frame = 0


Query: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60
           MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD
Sbjct: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60

Query: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120
           VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT
Sbjct: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120

Query: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180
           LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG
Sbjct: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180

Query: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240
           RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA
Sbjct: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240

Query: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300
           DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR
Sbjct: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300

Query: 301 ITKLSDYVRNSENISEEE------------------------------------LVALET 360
           ITKLSDYVRNSENISEEE                                    LVALET
Sbjct: 301 ITKLSDYVRNSENISEEELDVQLMLVSMDKTRIPALRSSYICCRPSVTIGHLRQLVALET 360

Query: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLY 388
           ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 
Sbjct: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLV 420

[Close]

BLAST of CmoCh03G012740 vs. NCBI nr
Match: XP_022925654.1 (putative E3 ubiquitin-protein ligase RING1a isoform X2 [Cucurbita moschata])

HSP 1 Score: 711.4 bits (1835), Expect = 4.3e-201
Identity = 384/421 (91.21%), Postives = 384/421 (91.21%), Query Frame = 0


Query: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60
           MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD
Sbjct: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60

Query: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120
           VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT
Sbjct: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120

Query: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180
           LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG
Sbjct: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180

Query: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240
           RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA
Sbjct: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240

Query: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300
           DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR
Sbjct: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300

Query: 301 ITKLSDYVRNSENISEEE------------------------------------LVALET 360
           ITKLSDYVRNSENISEEE                                    LVALET
Sbjct: 301 ITKLSDYVRNSENISEEELDVQLMLVSMDKTRIPALRSSYICCRPSVTIGHLRQLVALET 360

Query: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLY 386
           ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 
Sbjct: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLL 420

[Close]

BLAST of CmoCh03G012740 vs. NCBI nr
Match: KAG6604460.1 (putative E3 ubiquitin-protein ligase RING1a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 711.1 bits (1834), Expect = 5.6e-201
Identity = 383/421 (90.97%), Postives = 384/421 (91.21%), Query Frame = 0


Query: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60
           MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD
Sbjct: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60

Query: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120
           VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT
Sbjct: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120

Query: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180
           LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG
Sbjct: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180

Query: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240
           RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGP+RFSQSSSATGA
Sbjct: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPIRFSQSSSATGA 240

Query: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300
           DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR
Sbjct: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300

Query: 301 ITKLSDYVRNSENISEEE------------------------------------LVALET 360
           ITKLSDYVRNSENISEEE                                    LVALET
Sbjct: 301 ITKLSDYVRNSENISEEELDVQLMLVSMDKTRIPALRSPYICCRPSVTIGHLRQLVALET 360

Query: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLY 386
           ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 
Sbjct: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLL 420

[Close]

BLAST of CmoCh03G012740 vs. NCBI nr
Match: XP_023543673.1 (putative E3 ubiquitin-protein ligase RING1a isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 709.9 bits (1831), Expect = 1.2e-200
Identity = 383/423 (90.54%), Postives = 383/423 (90.54%), Query Frame = 0


Query: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60
           MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSS QEDKDEFVAVKLSDIRRD
Sbjct: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSGQEDKDEFVAVKLSDIRRD 60

Query: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120
           VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT
Sbjct: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120

Query: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180
           LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG
Sbjct: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180

Query: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240
           RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA
Sbjct: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240

Query: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300
           DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR
Sbjct: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300

Query: 301 ITKLSDYVRNSENISEEE------------------------------------LVALET 360
           ITKLSDYVRNSENISEEE                                    LVALET
Sbjct: 301 ITKLSDYVRNSENISEEELDVHLMLVSMDKTRIPALRSPYICCRPSVTIGHLRQLVALET 360

Query: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLY 388
           ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 
Sbjct: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLV 420

[Close]

BLAST of CmoCh03G012740 vs. NCBI nr
Match: XP_023543674.1 (putative E3 ubiquitin-protein ligase RING1a isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 709.9 bits (1831), Expect = 1.2e-200
Identity = 383/421 (90.97%), Postives = 383/421 (90.97%), Query Frame = 0


Query: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRD 60
           MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSS QEDKDEFVAVKLSDIRRD
Sbjct: 1   MPARKRVYETVHADLLPRLHDTFNDRSEDGESEESDRSSSSGQEDKDEFVAVKLSDIRRD 60

Query: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120
           VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT
Sbjct: 61  VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDT 120

Query: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180
           LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG
Sbjct: 121 LIAVLYPDIDKYEEEELAFQEEEKARNKQIQSSIAQTLKRQTEALGRKRSKPLRRLSSRG 180

Query: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240
           RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA
Sbjct: 181 RKSFQNHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGA 240

Query: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300
           DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR
Sbjct: 241 DGADGGSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNR 300

Query: 301 ITKLSDYVRNSENISEEE------------------------------------LVALET 360
           ITKLSDYVRNSENISEEE                                    LVALET
Sbjct: 301 ITKLSDYVRNSENISEEELDVHLMLVSMDKTRIPALRSPYICCRPSVTIGHLRQLVALET 360

Query: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLY 386
           ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYL 
Sbjct: 361 ALSVDVIEMYVVKELQMKINPSTSGTFLDPCKESAQILNQQETLSMDKLKTHRLACGYLL 420

[Close]

BLAST of CmoCh03G012740 vs. TAIR 10
Match: AT5G44280.1 (RING 1A )

HSP 1 Score: 263.8 bits (673), Expect = 2.2e-70
Identity = 167/333 (50.15%), Postives = 219/333 (65.77%), Query Frame = 0


Query: 25  DRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFC 84
           +  E+ E +  +RS SS   D+ EF+ + L +IR+DVQCPICLGII+KTRTVMECLHRFC
Sbjct: 98  EEEEEEEEDSKERSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFC 157

Query: 85  RECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEK 144
           RECIDKSMRLGNNECPACR HCASRRSLRDDP FD LIA L+ +ID YEEEELAF E+E 
Sbjct: 158 RECIDKSMRLGNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEM 217

Query: 145 ARNKQIQSSIAQTLKRQTEALGRKRS----------KPLRRLSSRGRKSF-----QNHIE 204
           ARNKQIQ+SIAQ  +RQ+EAL ++RS           P     SR R++      QN  E
Sbjct: 218 ARNKQIQASIAQISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRRNSRNMEQQNASE 277

Query: 205 SLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGADGADGGSNE 264
           +   D+N+D N+    K+SSS +   + R  KR +R    R +Q  S++GA+  +G   +
Sbjct: 278 AHEDDDNDDNNNRGRDKDSSSDERGTEVRQKKRRKR-STSRSTQHPSSSGANKNNGNCAD 337

Query: 265 NDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYG-GINGGGGKISRNNRITKLSDYV 324
           ND EV ++  G S GLV + E L+WG+GG RS+TR+G   +GG  K  RN R+ KL +Y+
Sbjct: 338 NDTEVYRDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYL 397

Query: 325 RNSENISEEE------LVALETALSVDVIEMYV 336
           R+S + S  E      LV+L+T    D+ + Y+
Sbjct: 398 RSSVDGSSVELDIHVKLVSLDTKCIPDLPQPYL 429

[Close]

BLAST of CmoCh03G012740 vs. TAIR 10
Match: AT1G03770.1 (RING 1B )

HSP 1 Score: 223.4 bits (568), Expect = 3.3e-58
Identity = 153/323 (47.37%), Postives = 212/323 (65.63%), Query Frame = 0


Query: 28  EDGESEESDRSSSSSQEDKDEFVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCREC 87
           E+ +S+E  +SSS+ +  + E++ V L+DI +DVQC ICLGIIRKTRTVMECLHRFCREC
Sbjct: 68  EEEDSKERSQSSSAGELSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCREC 127

Query: 88  IDKSMRLGNNECPACRTHCASRRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEKARN 147
           IDKSMRLGNNECP CR HCASRRSLRDDPNFD LIA L+ +IDK+EEEEL F+++++ARN
Sbjct: 128 IDKSMRLGNNECPTCRKHCASRRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARN 187

Query: 148 KQIQSSIAQTLKRQTEALGRKRS--KPLRRLS--------SRGRKSFQNHIESLSFDENE 207
           KQIQ+SIAQ  +RQ++AL +++S  K    LS        SR R++ +N IE  + + N+
Sbjct: 188 KQIQASIAQVSQRQSKALVKRKSVGKGTAILSRSRRSGGGSRRRRNCRN-IEQDTSEAND 247

Query: 208 DENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGADGADGGSNENDYEVNKE 267
           D++     K+SSS DE     P +R R+        SS+A   D   G   E  ++ +  
Sbjct: 248 DDDQNKRGKDSSS-DE-----PCERQRKKRSATQPSSSNANNNDNCAGNGTEQTHQRDSR 307

Query: 268 RVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNRITKLSDYVRNSENISEE 327
            +  S  LV +SE ++WG+GG RS+TR G  N  G    RN R+ +L +Y+ + E  S E
Sbjct: 308 VI--SPVLVWNSELIAWGRGGTRSNTRQGN-NNQGAISKRNARLKRLVEYLGSLEGNSVE 367

Query: 328 -----ELVALETALSVDVIEMYV 336
                +LV+L+T   +++ E Y+
Sbjct: 368 LDIHLKLVSLDTEGLLNLHEPYL 380

[Close]

BLAST of CmoCh03G012740 vs. TAIR 10
Match: AT1G03770.3 (RING 1B )

HSP 1 Score: 223.4 bits (568), Expect = 3.3e-58
Identity = 153/323 (47.37%), Postives = 212/323 (65.63%), Query Frame = 0


Query: 28  EDGESEESDRSSSSSQEDKDEFVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCREC 87
           E+ +S+E  +SSS+ +  + E++ V L+DI +DVQC ICLGIIRKTRTVMECLHRFCREC
Sbjct: 68  EEEDSKERSQSSSAGELSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCREC 127

Query: 88  IDKSMRLGNNECPACRTHCASRRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEKARN 147
           IDKSMRLGNNECP CR HCASRRSLRDDPNFD LIA L+ +IDK+EEEEL F+++++ARN
Sbjct: 128 IDKSMRLGNNECPTCRKHCASRRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARN 187

Query: 148 KQIQSSIAQTLKRQTEALGRKRS--KPLRRLS--------SRGRKSFQNHIESLSFDENE 207
           KQIQ+SIAQ  +RQ++AL +++S  K    LS        SR R++ +N IE  + + N+
Sbjct: 188 KQIQASIAQVSQRQSKALVKRKSVGKGTAILSRSRRSGGGSRRRRNCRN-IEQDTSEAND 247

Query: 208 DENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGADGADGGSNENDYEVNKE 267
           D++     K+SSS DE     P +R R+        SS+A   D   G   E  ++ +  
Sbjct: 248 DDDQNKRGKDSSS-DE-----PCERQRKKRSATQPSSSNANNNDNCAGNGTEQTHQRDSR 307

Query: 268 RVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNRITKLSDYVRNSENISEE 327
            +  S  LV +SE ++WG+GG RS+TR G  N  G    RN R+ +L +Y+ + E  S E
Sbjct: 308 VI--SPVLVWNSELIAWGRGGTRSNTRQGN-NNQGAISKRNARLKRLVEYLGSLEGNSVE 367

Query: 328 -----ELVALETALSVDVIEMYV 336
                +LV+L+T   +++ E Y+
Sbjct: 368 LDIHLKLVSLDTEGLLNLHEPYL 380

[Close]

BLAST of CmoCh03G012740 vs. TAIR 10
Match: AT1G03770.2 (RING 1B )

HSP 1 Score: 222.2 bits (565), Expect = 7.4e-58
Identity = 153/323 (47.37%), Postives = 211/323 (65.33%), Query Frame = 0


Query: 28  EDGESEESDRSSSSSQEDKDEFVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFCREC 87
           E  +S+E  +SSS+ +  + E++ V L+DI +DVQC ICLGIIRKTRTVMECLHRFCREC
Sbjct: 70  EVSDSKERSQSSSAGELSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCREC 129

Query: 88  IDKSMRLGNNECPACRTHCASRRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQEEEKARN 147
           IDKSMRLGNNECP CR HCASRRSLRDDPNFD LIA L+ +IDK+EEEEL F+++++ARN
Sbjct: 130 IDKSMRLGNNECPTCRKHCASRRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARN 189

Query: 148 KQIQSSIAQTLKRQTEALGRKRS--KPLRRLS--------SRGRKSFQNHIESLSFDENE 207
           KQIQ+SIAQ  +RQ++AL +++S  K    LS        SR R++ +N IE  + + N+
Sbjct: 190 KQIQASIAQVSQRQSKALVKRKSVGKGTAILSRSRRSGGGSRRRRNCRN-IEQDTSEAND 249

Query: 208 DENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGADGADGGSNENDYEVNKE 267
           D++     K+SSS DE     P +R R+        SS+A   D   G   E  ++ +  
Sbjct: 250 DDDQNKRGKDSSS-DE-----PCERQRKKRSATQPSSSNANNNDNCAGNGTEQTHQRDSR 309

Query: 268 RVGASMGLVSSSEKLSWGKGGIRSHTRYGGINGGGGKISRNNRITKLSDYVRNSENISEE 327
            +  S  LV +SE ++WG+GG RS+TR G  N  G    RN R+ +L +Y+ + E  S E
Sbjct: 310 VI--SPVLVWNSELIAWGRGGTRSNTRQGN-NNQGAISKRNARLKRLVEYLGSLEGNSVE 369

Query: 328 -----ELVALETALSVDVIEMYV 336
                +LV+L+T   +++ E Y+
Sbjct: 370 LDIHLKLVSLDTEGLLNLHEPYL 382

[Close]

BLAST of CmoCh03G012740 vs. TAIR 10
Match: AT5G44280.2 (RING 1A )

HSP 1 Score: 197.2 bits (500), Expect = 2.5e-50
Identity = 143/337 (42.43%), Postives = 202/337 (59.94%), Query Frame = 0


Query: 25  DRSEDGESEESDRSSSSSQEDKDEFVAVKLSDIRRDVQCPICLGIIRKTRTVMECLHRFC 84
           +  E+ E +  +RS SS   D+ EF+ + L +IR+DVQCPICL  ++  R  +   ++  
Sbjct: 98  EEEEEEEEDSKERSPSSISGDQSEFMEIDLGEIRKDVQCPICLVGMKFLRLFIS-YYKEN 157

Query: 85  RECIDKSMR----LGNNECPACRTHCASRRSLRDDPNFDTLIAVLYPDIDKYEEEELAFQ 144
           ++C   S +      NNECPACR HCASRRSLRDDP FD LIA L+ +ID YEEEELAF 
Sbjct: 158 KDCDGMSPQFCATFKNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFH 217

Query: 145 EEEKARNKQIQSSIAQTLKRQTEALGRKRS----------KPLRRLSSRGRKSF-----Q 204
           E+E ARNKQIQ+SIAQ  +RQ+EAL ++RS           P     SR R++      Q
Sbjct: 218 EDEMARNKQIQASIAQISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRRNSRNMEQQ 277

Query: 205 NHIESLSFDENEDENDYDASKNSSSADERMDTRPNKRSRRGGPVRFSQSSSATGADGADG 264
           N  E+   D+N+D N+    K+SSS +   + R  KR +R    R +Q  S++GA+  +G
Sbjct: 278 NASEAHEDDDNDDNNNRGRDKDSSSDERGTEVRQKKRRKR-STSRSTQHPSSSGANKNNG 337

Query: 265 GSNENDYEVNKERVGASMGLVSSSEKLSWGKGGIRSHTRYG-GINGGGGKISRNNRITKL 324
              +ND EV ++  G S GLV + E L+WG+GG RS+TR+G   +GG  K  RN R+ KL
Sbjct: 338 NCADNDTEVYRDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKL 397

Query: 325 SDYVRNSENISEEE------LVALETALSVDVIEMYV 336
            +Y+R+S + S  E      LV+L+T    D+ + Y+
Sbjct: 398 VEYLRSSVDGSSVELDIHVKLVSLDTKCIPDLPQPYL 432

The following BLAST results are available for this feature:

BLAST of CmoCh03G012740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKW0	3.1e-69	50.15	Putative E3 ubiquitin-protein ligase RING1a OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q0WX00	4.6e-57	47.37	Putative E3 ubiquitin-protein ligase RING1b OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q7ZWM8	5.0e-19	32.72	E3 ubiquitin-protein ligase RING2-B OS=Xenopus laevis OX=8355 GN=rnf2-b PE=2 SV=...	[more]
Q66J69	6.6e-19	32.72	E3 ubiquitin-protein ligase RING2-A OS=Xenopus laevis OX=8355 GN=rnf2-a PE=2 SV=...	[more]
Q5TJF3	1.5e-18	32.84	E3 ubiquitin-protein ligase RING1 OS=Canis lupus familiaris OX=9615 GN=RING1 PE=...	[more]

BLAST of CmoCh03G012740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECT6	2.1e-201	91.21	putative E3 ubiquitin-protein ligase RING1a isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1EFU8	2.1e-201	90.78	putative E3 ubiquitin-protein ligase RING1a isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1IQZ1	6.1e-193	87.97	putative E3 ubiquitin-protein ligase RING1a isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1INR9	6.1e-193	88.39	putative E3 ubiquitin-protein ligase RING1a isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1EIS8	9.7e-175	89.36	putative E3 ubiquitin-protein ligase RING1a isoform X3 OS=Cucurbita moschata OX=...	[more]

BLAST of CmoCh03G012740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925653.1	4.3e-201	90.78	putative E3 ubiquitin-protein ligase RING1a isoform X1 [Cucurbita moschata]	[more]
XP_022925654.1	4.3e-201	91.21	putative E3 ubiquitin-protein ligase RING1a isoform X2 [Cucurbita moschata]	[more]
KAG6604460.1	5.6e-201	90.97	putative E3 ubiquitin-protein ligase RING1a, partial [Cucurbita argyrosperma sub...	[more]
XP_023543673.1	1.2e-200	90.54	putative E3 ubiquitin-protein ligase RING1a isoform X1 [Cucurbita pepo subsp. pe...	[more]
XP_023543674.1	1.2e-200	90.97	putative E3 ubiquitin-protein ligase RING1a isoform X2 [Cucurbita pepo subsp. pe...	[more]

BLAST of CmoCh03G012740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44280.1	2.2e-70	50.15	RING 1A	[more]
AT1G03770.1	3.3e-58	47.37	RING 1B	[more]
AT1G03770.3	3.3e-58	47.37	RING 1B	[more]
AT1G03770.2	7.4e-58	47.37	RING 1B	[more]
AT5G44280.2	2.5e-50	42.43	RING 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 63..102 e-value: 9.7E-7 score: 38.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 63..103 score: 12.076194
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 62..102 e-value: 7.9E-12 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..46
None	No IPR available	PANTHER	PTHR46537:SF3	OS11G0578200 PROTEIN	coord: 1..315
None	No IPR available	CDD	cd16531	RING-HC_RING1_like	coord: 63..103 e-value: 1.03346E-23 score: 90.9543
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 51..134
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 18..133 e-value: 3.4E-19 score: 70.6
IPR044592	Putative E3 ubiquitin-protein ligase RING1a/b	PANTHER	PTHR46537	OS11G0578200 PROTEIN	coord: 1..315
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 79..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G012740.1	CmoCh03G012740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding