CmoCh03G012530 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G012530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L4
Location	Cmo_Chr03: 9618248 .. 9620656 (-)
RNA-Seq Expression	CmoCh03G012530
Synteny	CmoCh03G012530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGCAGCCATAAAACCCTAATTCTTCCTTTCGTTTCTCTCCCCTGTTCTTCAAACACACAATCACTCTCCAATGGCCGCTGCCGCTCGCCCCCTGGTGTCGGTTCAGTCCCTCGAAGGGGACATGGCTACCGATGCGGTGCCCACCGTCCCACTTCCGGACGTGATGAAGGCTTCAATTCGGCCGGACATTGTTAGCTTTGTTCATTCCAACATCTCGAAGAACAGCCGCCAGCCCTACGCTGTCAGCAAGCGTGCTGGTCACCAAACCTCCGCGGAGTCATGGGGTACTGGACGTGCTGTTTCCCGTATTCCCCGTGTTCCTGGTGGAGGTACTCACCGTGCTGGTCAGGGTGCTTTCGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCTACTAAGATCTGGCGCCGTTGGCACCGCAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCAGCTATCGCGGCCTCTGCTGTTCCATCATTGGTTCTTGCTCGTGGCCATCGAATCGAGTCTGTCCCTGAATTGCCCCTTGTTGTAAGCGACTCGGCTGAAGGCGTTGAGAAGACCTCTGCTGCACTCAAGGTTCTTAAACAGGTTGGTGCATTCCCCGATGCTGAGAAGGCCAAAGATAGCCATTCGATCCGTCCAGGTAAGGGTAAGATGAGGAACCGCCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAATATTCCCGGAGTTGAGATTGCGAACGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCCGGTGGACACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTTCTTCCAAGGTCTAAGATGGTGAATGCAGATTTGTCAAGGATTATTAACTCTGACGAAGTGCAATCTGTAGTGAAGCCGATTAAGAAGGAGGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCAAAGACTGCTAGAAGAATGGCTCTTTTGGCTGAGGAGCAACGTGTTAAGGCTAAGAAGGAGAAACTTGACAAGAAGAGAAATTTGACTACAAAGGTACATCTTTCCCGTTCTTAGTGAGATCTTTTGCATGTTTCTCATTAAGTGTTATTTGTATTCCTTTGGAAATCAAGCAGTGCGTATGTTCATATTAGAAATGACTGAAGACATTTCCTGCCTTCAAATACTAATAATTATTTGTTGCTGTGAGGTTTGTTCCATTCTTTGATTGATGGCATAATTGGTTTGATATAATGGCTTAATTTGATTGGTCGTTTACATACATTCTTGTTGAACAAGTGGTTCATAGTTAAGGGTTCTGCTTCTGGTAAGCTTCATGTTCAATTATTTCCAGCCATCGTTTAACTTCGAAATGCATCCATTTTCAGGTTTACTATTGACTCTCTCCTCCTGTTTTTTTTTTTTAAACTGTAATGGTTTGTGTTCATAGATTTTGCAACAGTATATTTTTCTTTTCAATCTGGCTGTACATATCACTGCAAGTAATGGAAATGATGATTATAGCTGCAGTTATGACATAGAGTGTTAGTAATCTTTGTGGGTTCTGGTTGAGAACTGGGTTCTTTTGGGACTTGTTTGTTTTATTATCTTGGTGAAGTTCTTATGAGACATATATTTCTCGTTTTAAATTTAGATACTCCATGACCACAGGTTGTTTAATATGGTGGCACATATGTTCATATTATCTGCATTTTGTGATTGTATACATCCTAACCTCGGTGCTGATTTTCTTTTCCCCTTTTGTACATGAATTTACAGGAGGAGGCTACCACAATCAAAAGTGCAGGAAAGGCTTGGTATCAGACAATGATCTCAGACAGTGATTACACCGAGTTCGAGAACTTCTCGAAATGGCTTGGTGTCTCTCAGTAATTTCATTTTTCTTTATTCAAAATCTCATAGACCTCATTACTTTGTTAATCTATTTTGTCAAGGAGTTGTTTTTCTTGTTTTGACTGTTTTTGCGTTTATGAAGGGAAGTAATTTGGGAGAACAGTGAGTGAAATAACATAGATAATCTTCTTTGGTCTTTTCCTCTCCCGTTTTTTATCTAGATTCCTAATCTTTGTTTTAGTATCTATTGTCAAAACCGATATTGTATGCACTATGATTTGATAATCTTCTGTTTTTCGATGGTCAATTTCCTGGATGCCCTGTTCTTCATTGGCATATCATTTTCCCTACAAGCCTTGATTCATTTTCGCTAGGTTTTTAAGTGCAACCATTGTAGGGATAGGCTTTTGAGATATGAACAAAAAGACGACCCTTG

mRNA sequence

ACGCAGCCATAAAACCCTAATTCTTCCTTTCGTTTCTCTCCCCTGTTCTTCAAACACACAATCACTCTCCAATGGCCGCTGCCGCTCGCCCCCTGGTGTCGGTTCAGTCCCTCGAAGGGGACATGGCTACCGATGCGGTGCCCACCGTCCCACTTCCGGACGTGATGAAGGCTTCAATTCGGCCGGACATTGTTAGCTTTGTTCATTCCAACATCTCGAAGAACAGCCGCCAGCCCTACGCTGTCAGCAAGCGTGCTGGTCACCAAACCTCCGCGGAGTCATGGGGTACTGGACGTGCTGTTTCCCGTATTCCCCGTGTTCCTGGTGGAGGTACTCACCGTGCTGGTCAGGGTGCTTTCGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCTACTAAGATCTGGCGCCGTTGGCACCGCAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCAGCTATCGCGGCCTCTGCTGTTCCATCATTGGTTCTTGCTCGTGGCCATCGAATCGAGTCTGTCCCTGAATTGCCCCTTGTTGTAAGCGACTCGGCTGAAGGCGTTGAGAAGACCTCTGCTGCACTCAAGGTTCTTAAACAGGTTGGTGCATTCCCCGATGCTGAGAAGGCCAAAGATAGCCATTCGATCCGTCCAGGTAAGGGTAAGATGAGGAACCGCCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAATATTCCCGGAGTTGAGATTGCGAACGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCCGGTGGACACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTTCTTCCAAGGTCTAAGATGGTGAATGCAGATTTGTCAAGGATTATTAACTCTGACGAAGTGCAATCTGTAGTGAAGCCGATTAAGAAGGAGGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCAAAGACTGCTAGAAGAATGGCTCTTTTGGCTGAGGAGCAACGTGTTAAGGCTAAGAAGGAGAAACTTGACAAGAAGAGAAATTTGACTACAAAGGAGGAGGCTACCACAATCAAAAGTGCAGGAAAGGCTTGGTATCAGACAATGATCTCAGACAGTGATTACACCGAGTTCGAGAACTTCTCGAAATGGCTTGGTGTCTCTCAGTAATTTCATTTTTCTTTATTCAAAATCTCATAGACCTCATTACTTTGTTAATCTATTTTGTCAAGGAGTTGTTTTTCTTGTTTTGACTGTTTTTGCGTTTATGAAGGGAAGTAATTTGGGAGAACAGTGAGTGAAATAACATAGATAATCTTCTTTGGTCTTTTCCTCTCCCGTTTTTTATCTAGATTCCTAATCTTTGTTTTAGTATCTATTGTCAAAACCGATATTGTATGCACTATGATTTGATAATCTTCTGTTTTTCGATGGTCAATTTCCTGGATGCCCTGTTCTTCATTGGCATATCATTTTCCCTACAAGCCTTGATTCATTTTCGCTAGGTTTTTAAGTGCAACCATTGTAGGGATAGGCTTTTGAGATATGAACAAAAAGACGACCCTTG

Coding sequence (CDS)

ATGGCCGCTGCCGCTCGCCCCCTGGTGTCGGTTCAGTCCCTCGAAGGGGACATGGCTACCGATGCGGTGCCCACCGTCCCACTTCCGGACGTGATGAAGGCTTCAATTCGGCCGGACATTGTTAGCTTTGTTCATTCCAACATCTCGAAGAACAGCCGCCAGCCCTACGCTGTCAGCAAGCGTGCTGGTCACCAAACCTCCGCGGAGTCATGGGGTACTGGACGTGCTGTTTCCCGTATTCCCCGTGTTCCTGGTGGAGGTACTCACCGTGCTGGTCAGGGTGCTTTCGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCTACTAAGATCTGGCGCCGTTGGCACCGCAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCAGCTATCGCGGCCTCTGCTGTTCCATCATTGGTTCTTGCTCGTGGCCATCGAATCGAGTCTGTCCCTGAATTGCCCCTTGTTGTAAGCGACTCGGCTGAAGGCGTTGAGAAGACCTCTGCTGCACTCAAGGTTCTTAAACAGGTTGGTGCATTCCCCGATGCTGAGAAGGCCAAAGATAGCCATTCGATCCGTCCAGGTAAGGGTAAGATGAGGAACCGCCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAATATTCCCGGAGTTGAGATTGCGAACGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCCGGTGGACACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTTCTTCCAAGGTCTAAGATGGTGAATGCAGATTTGTCAAGGATTATTAACTCTGACGAAGTGCAATCTGTAGTGAAGCCGATTAAGAAGGAGGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCAAAGACTGCTAGAAGAATGGCTCTTTTGGCTGAGGAGCAACGTGTTAAGGCTAAGAAGGAGAAACTTGACAAGAAGAGAAATTTGACTACAAAGGAGGAGGCTACCACAATCAAAAGTGCAGGAAAGGCTTGGTATCAGACAATGATCTCAGACAGTGATTACACCGAGTTCGAGAACTTCTCGAAATGGCTTGGTGTCTCTCAGTAA

Protein sequence

MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ

Homology

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BLAST of CmoCh03G012530 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 5.3e-202
Identity = 362/404 (89.60%), Postives = 386/404 (95.54%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV+VQSLEGDMATD   TV LPDVMKASIRPDIV+FVHSNISKNSRQPYAVSK+
Sbjct: 5   AAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKK 64

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 65  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 124

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAF 181
           NQKRYAVVSAIAASAVPSLVLARGH+IE+VPELPLVVSDS EGVE+TSAALKVLKQ+GA+
Sbjct: 125 NQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGAY 184

Query: 182 PDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAKDSHSIRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPG++I NVERLN
Sbjct: 185 SDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLN 244

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFV+WTKSAFEKLDSIYGSF+K SEKK GYVLPRSKMVNADL+RIINSD
Sbjct: 245 LLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINSD 304

Query: 302 EVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PI++  KRAPLKKNPL+ LN MLKLNPYAKTARRM+LLAE +RVKAKKEKLDK
Sbjct: 305 EVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLDK 364

Query: 362 KRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   +KEEA+TIK+AGKAWYQTMISDSDYTEF+NF+KWLGVSQ
Sbjct: 365 KRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408

[Close]

BLAST of CmoCh03G012530 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 8.4e-192
Identity = 336/404 (83.17%), Postives = 377/404 (93.32%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD   TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAA+KVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKK+ KRA LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   TKEEA  IK+AGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 363 KRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of CmoCh03G012530 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-190
Identity = 336/404 (83.17%), Postives = 374/404 (92.57%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD   TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAA+KVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK   KRA LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR + TKEEA  IK+AGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 364 KRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of CmoCh03G012530 vs. ExPASy Swiss-Prot
Match: P08429 (60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2)

HSP 1 Score: 433.3 bits (1113), Expect = 3.0e-120
Identity = 225/382 (58.90%), Postives = 287/382 (75.13%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL+SV S +G+    +   V +P V +A IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ A+ 
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   LVKAFRNIPG+ + NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGLVKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302
           L+LAPGGH+GRF IWT+SAF KLD +YG++ K ++ K  Y LP  KM N DL+RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD-- 362
           +Q  ++   K+VKR  LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K D  
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPDDG 365

Query: 363 ---KKRNLTTKEEATTIKSAGK 380
               K+ L  K +   +  A K
Sbjct: 366 KPKAKKPLDAKTKMIKLAKAKK 383

[Close]

BLAST of CmoCh03G012530 vs. ExPASy Swiss-Prot
Match: P02385 (60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2)

HSP 1 Score: 433.3 bits (1113), Expect = 3.0e-120
Identity = 224/382 (58.64%), Postives = 287/382 (75.13%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL+SV S +G+ +      V +P V KA IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGETSG---KNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ A+ 
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   ++KAFRNIPG+ + NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGIIKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302
           L+LAPGGH+GRF IWT+SAF KLD +YG++ K ++ K  Y LP  KM N DL+RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD-- 362
           +Q  ++   K+VKR  LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K D  
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPDDG 365

Query: 363 ---KKRNLTTKEEATTIKSAGK 380
               K+ L  K +   +  A K
Sbjct: 366 KPKAKKPLDAKTKMIKLAKAKK 383

[Close]

BLAST of CmoCh03G012530 vs. ExPASy TrEMBL
Match: A0A6J1EDI0 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1)

HSP 1 Score: 777.7 bits (2007), Expect = 2.4e-221
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180

Query: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CmoCh03G012530 vs. ExPASy TrEMBL
Match: A0A6J1IL04 (60S ribosomal protein L4 OS=Cucurbita maxima OX=3661 GN=LOC111477999 PE=3 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 9.9e-220
Identity = 400/405 (98.77%), Postives = 404/405 (99.75%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVS+QSL+GDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSIQSLDGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDS EGVEKTSAALKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSVEGVEKTSAALKVLKQVGA 180

Query: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFE+PSEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFERPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQR+KAKKEKLD
Sbjct: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRLKAKKEKLD 360

Query: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CmoCh03G012530 vs. ExPASy TrEMBL
Match: A0A6J1I983 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 1.0e-216
Identity = 395/403 (98.01%), Postives = 400/403 (99.26%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           AAARPLVSVQSLEGDMATDA P VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183

Query: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303

Query: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363

Query: 363 RNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           RNLTTKEEAT+IK+AGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of CmoCh03G012530 vs. ExPASy TrEMBL
Match: A0A6J1HEY8 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111463360 PE=3 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 2.3e-216
Identity = 394/403 (97.77%), Postives = 400/403 (99.26%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           AAARPLVSVQSLEGDMATDA P VPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSKRA 63

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183

Query: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303

Query: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363

Query: 363 RNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           RNLTTKEEAT+IK+AGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of CmoCh03G012530 vs. ExPASy TrEMBL
Match: A0A5A7TZA0 (60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00800 PE=3 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 5.1e-216
Identity = 394/405 (97.28%), Postives = 399/405 (98.52%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDA PTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKE+AT I++AGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CmoCh03G012530 vs. NCBI nr
Match: XP_022925909.1 (60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo] >KAG6604443.1 60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034587.1 60S ribosomal protein L4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 777.7 bits (2007), Expect = 4.9e-221
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180

Query: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CmoCh03G012530 vs. NCBI nr
Match: XP_022977811.1 (60S ribosomal protein L4 [Cucurbita maxima])

HSP 1 Score: 772.3 bits (1993), Expect = 2.0e-219
Identity = 400/405 (98.77%), Postives = 404/405 (99.75%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVS+QSL+GDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSIQSLDGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDS EGVEKTSAALKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSVEGVEKTSAALKVLKQVGA 180

Query: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFE+PSEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFERPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQR+KAKKEKLD
Sbjct: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRLKAKKEKLD 360

Query: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CmoCh03G012530 vs. NCBI nr
Match: XP_022972645.1 (60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 762.3 bits (1967), Expect = 2.1e-216
Identity = 395/403 (98.01%), Postives = 400/403 (99.26%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           AAARPLVSVQSLEGDMATDA P VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183

Query: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303

Query: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363

Query: 363 RNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           RNLTTKEEAT+IK+AGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of CmoCh03G012530 vs. NCBI nr
Match: XP_038882700.1 (60S ribosomal protein L4 [Benincasa hispida])

HSP 1 Score: 761.9 bits (1966), Expect = 2.8e-216
Identity = 395/405 (97.53%), Postives = 400/405 (98.77%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDA PTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKM+NADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMMNADLSRIINS 300

Query: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPSLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEEAT I++AGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CmoCh03G012530 vs. NCBI nr
Match: XP_022963036.1 (60S ribosomal protein L4 [Cucurbita moschata])

HSP 1 Score: 761.1 bits (1964), Expect = 4.7e-216
Identity = 394/403 (97.77%), Postives = 400/403 (99.26%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           AAARPLVSVQSLEGDMATDA P VPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSKRA 63

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183

Query: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303

Query: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363

Query: 363 RNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           RNLTTKEEAT+IK+AGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of CmoCh03G012530 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 671.0 bits (1730), Expect = 6.0e-193
Identity = 336/404 (83.17%), Postives = 377/404 (93.32%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD   TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAA+KVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKK+ KRA LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   TKEEA  IK+AGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 363 KRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of CmoCh03G012530 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 667.2 bits (1720), Expect = 8.6e-192
Identity = 336/404 (83.17%), Postives = 374/404 (92.57%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD   TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAA+KVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK   KRA LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR + TKEEA  IK+AGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 364 KRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of CmoCh03G012530 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 664.8 bits (1714), Expect = 4.3e-191
Identity = 335/404 (82.92%), Postives = 376/404 (93.07%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD   TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAA+KVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKK+ KRA LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   TK EA  IK+AGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 363 KRKTVTK-EALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 405

[Close]

BLAST of CmoCh03G012530 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 661.0 bits (1704), Expect = 6.2e-190
Identity = 335/404 (82.92%), Postives = 373/404 (92.33%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD   TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAA+KVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK   KRA LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR + TK EA  IK+AGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 364 KRKVVTK-EAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 406

The following BLAST results are available for this feature:

BLAST of CmoCh03G012530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	5.3e-202	89.60	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	8.4e-192	83.17	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	1.2e-190	83.17	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
P08429	3.0e-120	58.90	60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2	[more]
P02385	3.0e-120	58.64	60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2	[more]

BLAST of CmoCh03G012530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EDI0	2.4e-221	100.00	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1	[more]
A0A6J1IL04	9.9e-220	98.77	60S ribosomal protein L4 OS=Cucurbita maxima OX=3661 GN=LOC111477999 PE=3 SV=1	[more]
A0A6J1I983	1.0e-216	98.01	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 S...	[more]
A0A6J1HEY8	2.3e-216	97.77	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111463360 PE=3 SV=1	[more]
A0A5A7TZA0	5.1e-216	97.28	60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of CmoCh03G012530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925909.1	4.9e-221	100.00	60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal prot...	[more]
XP_022977811.1	2.0e-219	98.77	60S ribosomal protein L4 [Cucurbita maxima]	[more]
XP_022972645.1	2.1e-216	98.01	60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal p...	[more]
XP_038882700.1	2.8e-216	97.53	60S ribosomal protein L4 [Benincasa hispida]	[more]
XP_022963036.1	4.7e-216	97.77	60S ribosomal protein L4 [Cucurbita moschata]	[more]

BLAST of CmoCh03G012530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	6.0e-193	83.17	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	8.6e-192	83.17	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	4.3e-191	82.92	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	6.2e-190	82.92	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 345..365
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..95
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 2..405
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 2..405
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 26..266 e-value: 4.1E-40 score: 137.5
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 280..352 e-value: 4.9E-29 score: 100.2
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 3..308 e-value: 5.3E-143 score: 477.6
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 11..267
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 120..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G012530.1	CmoCh03G012530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome