CmoCh03G012120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G012120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transcription initiation factor TFIID subunit 8
Location	Cmo_Chr03: 9419389 .. 9420468 (+)
RNA-Seq Expression	CmoCh03G012120
Synteny	CmoCh03G012120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCATGGAGGTGGGAACATTACGCGAGAGAATGAAAACCCGGCGGATCGTTTTAGGAGAGCTGGAGCTGATGATTTCGGGCGTGAGGTGTCGAAAGTTGCAGCAGCGCAGATATGCCAGAGTCTGGGATTCCAGGGATCGAAAGAGTCTGCTCTGGACACGCTTGCAGAAATTGTAATAGTATATCTTAGTGATTTGGGAAAGATGGCGAATTTCTATTCTAACTTAGCTGGTAGAACTGAGTGTAATGTGTTTGACATTATTAGAGGACTTAAGGATTTAGGAGCACCAGGGTCTCATCAAGATGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTACAATTCAAGAAATTTTTGAGTATGTGAATTCGGTACAAGAAATTCCATTTTCTCAGCCAATGGCGCAGTTTCCTATTATTAAGAGCAGTAAGGTACTGCCGAGTTTCATTCAGATGAGGGAAACACCTCCTAGCAAGCATATACCCAATTGGCTTCCTGCTTTTCCTGATCCCCACACTTACATTTATACGCCGGTGTGGAATAAGAGAATGACGGACCCTCGCACTGACAAGATTGAGCAAGCAAGGCAGAGGAGAAAGGCAGAGAAGTCATTGTTAAGTCTGCAGCAGCAGTTGGTAGTTAATACTGACCATCTAGAAGAAGAATTACCTAGTTTGGATAGTAGCGCATCCCATGATACAGAATTGCAACCGAGGGAAAACACCGTTTCTGTGGTCAAATCTCCTCTTAAACATTCAGACACTGTGTTTGATGATAGCAGTTCTGTGTTAGAGGTATTTGCTCCGGCCATAGAAGCTGTTAAAGGGAGTGGATTTTATGATGATGAAGAGGGTGAGAAGAAGGAACTTCCCATTGTTAGGCCTGCTGTTCAGTTTAAGTTTAAAACTGGGAAGAAACTTCTTGGTGATTCTTTGGATTTGATCATTCAAAAGAAAGGAACTGGTAGAAGAGGGTCCTTGGTTGGACGGGACGATGAAAGGGATGATAAGAAACGAAGAGCTGAATACATTCTTAGACAGTCTGTGGAGAATCCGCAAGAACTCAATCAGTTGTGA

mRNA sequence

ATGAGCCATGGAGGTGGGAACATTACGCGAGAGAATGAAAACCCGGCGGATCGTTTTAGGAGAGCTGGAGCTGATGATTTCGGGCGTGAGGTGTCGAAAGTTGCAGCAGCGCAGATATGCCAGAGTCTGGGATTCCAGGGATCGAAAGAGTCTGCTCTGGACACGCTTGCAGAAATTGTAATAGTATATCTTAGTGATTTGGGAAAGATGGCGAATTTCTATTCTAACTTAGCTGGTAGAACTGAGTGTAATGTGTTTGACATTATTAGAGGACTTAAGGATTTAGGAGCACCAGGGTCTCATCAAGATGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTACAATTCAAGAAATTTTTGAGTATGTGAATTCGGTACAAGAAATTCCATTTTCTCAGCCAATGGCGCAGTTTCCTATTATTAAGAGCAGTAAGGTACTGCCGAGTTTCATTCAGATGAGGGAAACACCTCCTAGCAAGCATATACCCAATTGGCTTCCTGCTTTTCCTGATCCCCACACTTACATTTATACGCCGGTGTGGAATAAGAGAATGACGGACCCTCGCACTGACAAGATTGAGCAAGCAAGGCAGAGGAGAAAGGCAGAGAAGTCATTGTTAAGTCTGCAGCAGCAGTTGGTAGTTAATACTGACCATCTAGAAGAAGAATTACCTAGTTTGGATAGTAGCGCATCCCATGATACAGAATTGCAACCGAGGGAAAACACCGTTTCTGTGGTCAAATCTCCTCTTAAACATTCAGACACTGTGTTTGATGATAGCAGTTCTGTGTTAGAGGTATTTGCTCCGGCCATAGAAGCTGTTAAAGGGAGTGGATTTTATGATGATGAAGAGGGTGAGAAGAAGGAACTTCCCATTGTTAGGCCTGCTGTTCAGTTTAAGTTTAAAACTGGGAAGAAACTTCTTGGTGATTCTTTGGATTTGATCATTCAAAAGAAAGGAACTGGTAGAAGAGGGTCCTTGGTTGGACGGGACGATGAAAGGGATGATAAGAAACGAAGAGCTGAATACATTCTTAGACAGTCTGTGGAGAATCCGCAAGAACTCAATCAGTTGTGA

Coding sequence (CDS)

ATGAGCCATGGAGGTGGGAACATTACGCGAGAGAATGAAAACCCGGCGGATCGTTTTAGGAGAGCTGGAGCTGATGATTTCGGGCGTGAGGTGTCGAAAGTTGCAGCAGCGCAGATATGCCAGAGTCTGGGATTCCAGGGATCGAAAGAGTCTGCTCTGGACACGCTTGCAGAAATTGTAATAGTATATCTTAGTGATTTGGGAAAGATGGCGAATTTCTATTCTAACTTAGCTGGTAGAACTGAGTGTAATGTGTTTGACATTATTAGAGGACTTAAGGATTTAGGAGCACCAGGGTCTCATCAAGATGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTACAATTCAAGAAATTTTTGAGTATGTGAATTCGGTACAAGAAATTCCATTTTCTCAGCCAATGGCGCAGTTTCCTATTATTAAGAGCAGTAAGGTACTGCCGAGTTTCATTCAGATGAGGGAAACACCTCCTAGCAAGCATATACCCAATTGGCTTCCTGCTTTTCCTGATCCCCACACTTACATTTATACGCCGGTGTGGAATAAGAGAATGACGGACCCTCGCACTGACAAGATTGAGCAAGCAAGGCAGAGGAGAAAGGCAGAGAAGTCATTGTTAAGTCTGCAGCAGCAGTTGGTAGTTAATACTGACCATCTAGAAGAAGAATTACCTAGTTTGGATAGTAGCGCATCCCATGATACAGAATTGCAACCGAGGGAAAACACCGTTTCTGTGGTCAAATCTCCTCTTAAACATTCAGACACTGTGTTTGATGATAGCAGTTCTGTGTTAGAGGTATTTGCTCCGGCCATAGAAGCTGTTAAAGGGAGTGGATTTTATGATGATGAAGAGGGTGAGAAGAAGGAACTTCCCATTGTTAGGCCTGCTGTTCAGTTTAAGTTTAAAACTGGGAAGAAACTTCTTGGTGATTCTTTGGATTTGATCATTCAAAAGAAAGGAACTGGTAGAAGAGGGTCCTTGGTTGGACGGGACGATGAAAGGGATGATAAGAAACGAAGAGCTGAATACATTCTTAGACAGTCTGTGGAGAATCCGCAAGAACTCAATCAGTTGTGA

Protein sequence

MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIVIVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIFEYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPRENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQFKFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL

Homology

[Close]

BLAST of CmoCh03G012120 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.2e-71
Identity = 155/338 (45.86%), Postives = 217/338 (64.20%), Query Frame = 0


Query: 26  DFGREVSKVAAAQICQSLGFQGSKESALDTLAEIVIVYLSDLGKMANFYSNLAGRTECNV 85
           +F    +K A AQ+C+S+G++  K+ AL++L+   + Y+  LGK A  ++NL GR++CNV
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 86  FDIIRGLKDLGAPGSHQDAEVSRCLAG-SRTIQEIFEYVNSVQEIPFSQPMAQFPII--- 145
           FDII  L DL      Q      C  G S  ++EI ++VNS +E+PFSQP+  FP+    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 146 KSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRMTDPRTDKIEQARQRRK 205
           +S K++PSF+++ ETPP KHIP WLPAFPDPHTY  TP+W +R++DPR DKIEQARQRRK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 206 AEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPRENTVSVVKSPLKHSDTVFDDS 265
           AE++LLSLQ++LV            +D       E++  E+ +  V S  K  +++  D 
Sbjct: 205 AERALLSLQRKLVCKISSRNPVWGDMDGVKE---EMRDDESELRSVSSGEK-VESLNRDG 264

Query: 266 SSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQFKFKTGKKLLGDSLDLIIQKKG 325
            SV+E FAPA+EA +  GF  +   E K+    +P    K +T KK LG  LDL +Q KG
Sbjct: 265 LSVIEAFAPAMEAAR-DGFSSEAHTEWKK---NKPVALSKLRTEKKFLGQPLDLSLQMKG 324

Query: 326 TGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
             R  S V R+++RDDK+RRAE+ILRQ +ENP +LNQL
Sbjct: 325 EDRPISFV-REEDRDDKRRRAEFILRQCMENPVDLNQL 353

[Close]

BLAST of CmoCh03G012120 vs. ExPASy Swiss-Prot
Match: A7MAZ4 (Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.6e-13
Identity = 49/198 (24.75%), Postives = 93/198 (46.97%), Query Frame = 0


Query: 9   TRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIVIVYLSDLG 68
           ++++ NPAD +  A      R   +V  + +    GF+ +++++++TL E++  Y+S++G
Sbjct: 19  SKQSTNPADNYHLA-----RRRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIG 78

Query: 69  KMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIFEYVNSVQE 128
           + A  Y     RT+  + DI+  L ++G                   +  +  Y    Q 
Sbjct: 79  RSAKSYCEHTARTQPTLSDIVVTLVEMGF-----------------NVDTLPAYAKRSQR 138

Query: 129 IPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRMTDP 188
           +  + P    P+        +    +  P   HIP+  P FPDPHTYI TP + + ++D 
Sbjct: 139 MVITAP----PVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDY 190

Query: 189 RTDKIEQARQRRKAEKSL 207
           +  + + A QRR  E++L
Sbjct: 199 QVLREKAASQRRDVERAL 190

[Close]

BLAST of CmoCh03G012120 vs. ExPASy Swiss-Prot
Match: Q7Z7C8 (Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.6e-13
Identity = 53/206 (25.73%), Postives = 96/206 (46.60%), Query Frame = 0


Query: 5   GGNITR----ENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 64
           GG+ TR    ++ NPAD +  A      R   +V  + +    GF+ +++++++TL E++
Sbjct: 11  GGSGTRSGSKQSTNPADNYHLA-----RRRTLQVVVSSLLTEAGFESAEKASVETLTEML 70

Query: 65  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 124
             Y+S++G+ A  Y     RT+  + DI+  L ++G                   +  + 
Sbjct: 71  QSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGF-----------------NVDTLP 130

Query: 125 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 184
            Y    Q +  + P    P+        +    +  P   HIP+  P FPDPHTYI TP 
Sbjct: 131 AYAKRSQRMVITAP----PVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPT 190

Query: 185 WNKRMTDPRTDKIEQARQRRKAEKSL 207
           + + ++D +  + + A QRR  E++L
Sbjct: 191 YREPVSDYQVLREKAASQRRDVERAL 190

[Close]

BLAST of CmoCh03G012120 vs. ExPASy Swiss-Prot
Match: Q9EQH4 (Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.0e-12
Identity = 74/326 (22.70%), Postives = 137/326 (42.02%), Query Frame = 0


Query: 5   GGNITR----ENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 64
           GG+ TR    ++ NPAD +  A      R   +V  + +    GF+ +++++++TL E++
Sbjct: 9   GGSGTRPGSKQSTNPADNYHLA-----RRRTLQVVVSSLLTEAGFESAEKASVETLTEML 68

Query: 65  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 124
             Y+S++G+ A  Y     RT+  + DI+  L ++G                   +  + 
Sbjct: 69  QSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGF-----------------NVDTLP 128

Query: 125 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 184
            Y    Q +  + P    P+        +    +  P   HIP+  P FPDPHTYI TP 
Sbjct: 129 AYAKRSQRMVITAP----PVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPT 188

Query: 185 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEE-------------LPSL 244
           + + ++D +  + + A QRR  E++L     +        +++             +P L
Sbjct: 189 YREPVSDYQILREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPYL 248

Query: 245 DSSASHDTELQPRENTVSVVKSPLKHSDT-----VFDDSSSVLEVFAPAIEAVKGSGFYD 304
            +    + E+Q  E T S  +     ++        DDS +  E  +   ++   SG  +
Sbjct: 249 TALLPSELEIQQMEETDSSEQEEQTDTENNALHISTDDSGAEKESASVLQQSSSLSGSRN 307

Query: 305 DEEGEKKELPIVRPAVQFKFKTGKKL 309
            EE    + P +RP  + K +  K L
Sbjct: 309 GEE-SVIDNPYLRPVKKPKIRRKKSL 307

[Close]

BLAST of CmoCh03G012120 vs. ExPASy Swiss-Prot
Match: Q7ZYA2 (Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf8 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.0e-12
Identity = 51/198 (25.76%), Postives = 91/198 (45.96%), Query Frame = 0


Query: 10  RENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIVIVYLSDLGK 69
           R    PAD +  A      R   +V  + +    GF  ++++A+++L E++  YLS++G+
Sbjct: 10  RGTSTPADNYMLA-----RRRTLQVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGR 69

Query: 70  MANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIFEYVNSVQEI 129
            A  Y     RT+  + DI+  L ++G                   +  +  Y    Q +
Sbjct: 70  SAKSYCEHTARTQPTLPDIVVTLIEMGF-----------------NVDSLPAYAKRSQRM 129

Query: 130 PFSQPMAQFPIIKSSKVLPSFIQMRETPP-SKHIPNWLPAFPDPHTYIYTPVWNKRMTDP 189
             + P      + ++ V+P  +   +  P   HIP+  P FPDPHTYI TP + + + D 
Sbjct: 130 VITAPP-----VTNNPVVPKALSAGDNKPHPAHIPSHFPEFPDPHTYIKTPTYREPVCDY 180

Query: 190 RTDKIEQARQRRKAEKSL 207
           +  + + A QRR  E++L
Sbjct: 190 QVLREKAASQRRDVERAL 180

[Close]

BLAST of CmoCh03G012120 vs. ExPASy TrEMBL
Match: A0A6J1EGW4 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111433266 PE=3 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 5.0e-199
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120
           IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120

Query: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240
           WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240

Query: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300
           ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CmoCh03G012120 vs. ExPASy TrEMBL
Match: A0A6J1IV18 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111478655 PE=3 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.1e-197
Identity = 355/359 (98.89%), Postives = 356/359 (99.16%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120
           IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQD EVSRCLAGS TIQEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDDEVSRCLAGSHTIQEIF 120

Query: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPF+QPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFAQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240
           WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240

Query: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300
           ENTVSVVKSPLKHSDTVFDDSSSVLE FAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CmoCh03G012120 vs. ExPASy TrEMBL
Match: A0A5D3C832 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00220 PE=3 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.6e-176
Identity = 319/360 (88.61%), Postives = 333/360 (92.50%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENEN  DRFRR G DDFGR+VSK+AAAQICQSLGFQGSKESA+DTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPG-SHQDAEVSRCLAGSRTIQEI 120
           +VYLSDLGKMA+FYSNLAGRTECNVFDI+RG KDL APG SHQDAEVSRCLAGSRTIQEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
           FEYVNSVQEIPF+QP+ QFPIIKS KVLPSFIQM+ETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPQFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQP 240
           VWNKR TDPRTDKIEQARQRRKAEKSLLSLQQ+L+VNT +LEEELPS DS+ SHD ELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQ 300
           REN VS VKS LKHSD VFD+SS VLE FAPAIEAVKGSGFYDDEEGEKK LPIVRP VQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           FKFKTGKKLLGDSLDL IQKKG GR   LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of CmoCh03G012120 vs. ExPASy TrEMBL
Match: A0A1S3CH15 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103500817 PE=3 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 3.0e-175
Identity = 318/360 (88.33%), Postives = 332/360 (92.22%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENEN  DRFRR G DDFGR+VSK+AAAQICQSLGFQGSKESA+DTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPG-SHQDAEVSRCLAGSRTIQEI 120
           +VYLSDLGKMA+FYSNLAGRTECNVFDI+RG KDL APG SHQDAEVSRCLAGSRTIQEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
           FEYVNSVQEIPF+QP+  FPIIKS KVLPSFIQM+ETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPLFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQP 240
           VWNKR TDPRTDKIEQARQRRKAEKSLLSLQQ+L+VNT +LEEELPS DS+ SHD ELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQ 300
           REN VS VKS LKHSD VFD+SS VLE FAPAIEAVKGSGFYDDEEGEKK LPIVRP VQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           FKFKTGKKLLGDSLDL IQKKG GR   LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of CmoCh03G012120 vs. ExPASy TrEMBL
Match: A0A0A0KF51 (Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Csa_6G446430 PE=3 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.9e-175
Identity = 321/360 (89.17%), Postives = 331/360 (91.94%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENEN  DRFRR G DDFGREVSK+AAAQICQSLGFQGSKESA+DTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPG-SHQDAEVSRCLAGSRTIQEI 120
           IVYLSDLGKMA+FYSNLAGRTECNVFDI+RG KDL APG SHQDAEVSRCLAGSRTIQEI
Sbjct: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
           FEYVNSVQEIPF+QP+ +FPIIKS KVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQP 240
           VWNKR TDPRTDKIEQARQRRKAEKSLLSLQQ+LVVNT +LEEELPS DS+  HD ELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240

Query: 241 RENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQ 300
           REN VSVVKS LKHSD  FDDSS VLE FAPAIEAVKGSGFYDDEEG KK LPIVRP VQ
Sbjct: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPLVQ 300

Query: 301 FKFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           FKFKTGKKLLGDSLDL IQKKG GR   LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of CmoCh03G012120 vs. NCBI nr
Match: XP_022926028.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita moschata])

HSP 1 Score: 703.4 bits (1814), Expect = 1.0e-198
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120
           IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120

Query: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240
           WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240

Query: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300
           ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CmoCh03G012120 vs. NCBI nr
Match: KAG6604404.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 699.1 bits (1803), Expect = 1.9e-197
Identity = 356/359 (99.16%), Postives = 358/359 (99.72%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120
           IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120

Query: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPF+QPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFAQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240
           WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDT+LQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTKLQPR 240

Query: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300
           ENTVSVVKSPLKHSDTVFDDSSSVLE FAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CmoCh03G012120 vs. NCBI nr
Match: XP_023544694.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 697.6 bits (1799), Expect = 5.7e-197
Identity = 355/359 (98.89%), Postives = 356/359 (99.16%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENENPADRFRRAG DDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGGDDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120
           IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120

Query: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPF+QPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFAQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240
           WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSS SHDTELQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSTSHDTELQPR 240

Query: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300
           ENTVSVVKSPLKHSDTVFDDSSSVLE FAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CmoCh03G012120 vs. NCBI nr
Match: XP_022978799.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita maxima])

HSP 1 Score: 696.4 bits (1796), Expect = 1.3e-196
Identity = 355/359 (98.89%), Postives = 356/359 (99.16%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120
           IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQD EVSRCLAGS TIQEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDDEVSRCLAGSHTIQEIF 120

Query: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPF+QPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFAQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240
           WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240

Query: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300
           ENTVSVVKSPLKHSDTVFDDSSSVLE FAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CmoCh03G012120 vs. NCBI nr
Match: KAG7034555.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 695.7 bits (1794), Expect = 2.2e-196
Identity = 354/359 (98.61%), Postives = 356/359 (99.16%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60
           MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAE V
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAETV 60

Query: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120
           IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120

Query: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPF+QPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFAQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240
           WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDT+LQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTKLQPR 240

Query: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300
           ENTVS VKSPLKHSDTVFDDSSSVLE FAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF
Sbjct: 241 ENTVSAVKSPLKHSDTVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CmoCh03G012120 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 270.8 bits (691), Expect = 1.6e-72
Identity = 155/338 (45.86%), Postives = 217/338 (64.20%), Query Frame = 0


Query: 26  DFGREVSKVAAAQICQSLGFQGSKESALDTLAEIVIVYLSDLGKMANFYSNLAGRTECNV 85
           +F    +K A AQ+C+S+G++  K+ AL++L+   + Y+  LGK A  ++NL GR++CNV
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 86  FDIIRGLKDLGAPGSHQDAEVSRCLAG-SRTIQEIFEYVNSVQEIPFSQPMAQFPII--- 145
           FDII  L DL      Q      C  G S  ++EI ++VNS +E+PFSQP+  FP+    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 146 KSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRMTDPRTDKIEQARQRRK 205
           +S K++PSF+++ ETPP KHIP WLPAFPDPHTY  TP+W +R++DPR DKIEQARQRRK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 206 AEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPRENTVSVVKSPLKHSDTVFDDS 265
           AE++LLSLQ++LV            +D       E++  E+ +  V S  K  +++  D 
Sbjct: 205 AERALLSLQRKLVCKISSRNPVWGDMDGVKE---EMRDDESELRSVSSGEK-VESLNRDG 264

Query: 266 SSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQFKFKTGKKLLGDSLDLIIQKKG 325
            SV+E FAPA+EA +  GF  +   E K+    +P    K +T KK LG  LDL +Q KG
Sbjct: 265 LSVIEAFAPAMEAAR-DGFSSEAHTEWKK---NKPVALSKLRTEKKFLGQPLDLSLQMKG 324

Query: 326 TGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
             R  S V R+++RDDK+RRAE+ILRQ +ENP +LNQL
Sbjct: 325 EDRPISFV-REEDRDDKRRRAEFILRQCMENPVDLNQL 353

[Close]

BLAST of CmoCh03G012120 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-30
Identity = 81/247 (32.79%), Postives = 128/247 (51.82%), Query Frame = 0


Query: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQS---------------LGF 60
           M +GGG    +      +   +  +DF   ++++A AQIC+S               L F
Sbjct: 1   MINGGGEGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 60

Query: 61  QGSKESALDTLAEIVIVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGA----PGSH 120
              +E+AL+TL ++VI Y+ ++GK A FY N+AGR E N  DI++ L+DLG+     G+H
Sbjct: 61  SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 120

Query: 121 QDAEVSRCLAGSRTIQEIFEYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKH 180
              +V  CLA S  +++I  Y    +EIPF   + +FP  +  +  PSF  +   PP +H
Sbjct: 121 ---DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEH 180

Query: 181 IPNWLPAFPDPHTYIYTPVWNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLE 229
           IP WLPAFP+          +    +   DKIE+  Q R    SL+S+QQ + V+   ++
Sbjct: 181 IPVWLPAFPETK-------MSNGSEEINVDKIERDVQSRDNGSSLMSVQQSVDVDRLKVQ 237

[Close]

BLAST of CmoCh03G012120 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-29
Identity = 68/182 (37.36%), Postives = 101/182 (55.49%), Query Frame = 0


Query: 5   GGNITRENENPADRFRRAGADDFGREVSKVAAAQICQS--------------LGFQGSKE 64
           GG+  RE       FR    +DF   ++++A AQIC+S              + F   +E
Sbjct: 24  GGSQQRELHGKRKLFR---GNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFSSFQE 83

Query: 65  SALDTLAEIVIVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAP-GSHQDAEVSRC 124
           SALDTL ++ + Y+  +GK A+ Y+NLAGR + N  DI++ L+DLG+  G    ++   C
Sbjct: 84  SALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSDTDHC 143

Query: 125 LAGSRTIQEIFEYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAF 172
           LA S  +++I  Y    +EIPF   + +FP  K  K  PSF ++   PP +HIP WLPAF
Sbjct: 144 LADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVWLPAF 202

[Close]

BLAST of CmoCh03G012120 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-17
Identity = 65/225 (28.89%), Postives = 114/225 (50.67%), Query Frame = 0


Query: 26  DFGREVSKVAAAQICQSLGFQGSKESALDTLAEIVIVYLSDLGKMANFYSNLAGRTECNV 85
           +F   ++K+A +QICQS+G++ +  SAL+TL      +L  L ++A+ +SN A RTE N+
Sbjct: 25  EFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSLAELASSFSNTANRTEVNL 84

Query: 86  FDIIRGLKDLGA------PGSHQDAEV-SRCLAGSRTIQEIFEYVNSVQEIPFSQPMAQF 145
           FDI+ GL+D+        PG     ++ S+CL  S  ++ + ++V    EIPF++P+ + 
Sbjct: 85  FDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLSDFVTYAPEIPFAKPLPRR 144

Query: 146 PIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRMTDPRTDKI----E 205
               S       + +  +     +P WLP FPD      +   ++   D R+D +    +
Sbjct: 145 ERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPDS-----SLCSDRCSKDNRSDHLWENSD 204

Query: 206 QARQRRKAEKSLLSLQ-QQLVVNTDHLEEELPSLDSSASHDTELQ 239
              +R    +SL S    +L V  D +  ++   D S+  DT L+
Sbjct: 205 SVIRREILPESLKSKSGGRLPVMRDKVRFKMEQRDWSSGGDTRLE 244

The following BLAST results are available for this feature:

BLAST of CmoCh03G012120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	2.2e-71	45.86	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]
A7MAZ4	3.6e-13	24.75	Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE...	[more]
Q7Z7C8	3.6e-13	25.73	Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 ...	[more]
Q9EQH4	4.0e-12	22.70	Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8...	[more]
Q7ZYA2	9.0e-12	25.76	Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf...	[more]

BLAST of CmoCh03G012120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGW4	5.0e-199	100.00	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IV18	6.1e-197	98.89	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3C832	4.6e-176	88.61	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CH15	3.0e-175	88.33	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KF51	3.9e-175	89.17	Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Cs...	[more]

BLAST of CmoCh03G012120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926028.1	1.0e-198	100.00	transcription initiation factor TFIID subunit 8-like [Cucurbita moschata]	[more]
KAG6604404.1	1.9e-197	99.16	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]
XP_023544694.1	5.7e-197	98.89	transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo...	[more]
XP_022978799.1	1.3e-196	98.89	transcription initiation factor TFIID subunit 8-like [Cucurbita maxima]	[more]
KAG7034555.1	2.2e-196	98.61	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]

BLAST of CmoCh03G012120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34340.1	1.6e-72	45.86	TBP-associated factor 8	[more]
AT5G15570.1	1.2e-30	32.79	Bromodomain transcription factor	[more]
AT3G02160.1	3.7e-29	37.36	Bromodomain transcription factor	[more]
AT1G31240.1	1.5e-17	28.89	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006565	Bromodomain associated domain	SMART	SM00576	17neu3	coord: 25..102 e-value: 3.2E-21 score: 86.5
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 28..96 e-value: 1.5E-18 score: 66.5
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	PFAM	PF10406	TAF8_C	coord: 161..209 e-value: 5.8E-21 score: 74.8
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	CDD	cd08049	TAF8	coord: 161..213 e-value: 1.47269E-24 score: 92.7211
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 23..104 e-value: 5.5E-19 score: 69.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..248
None	No IPR available	PANTHER	PTHR46338:SF1	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..359
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G012120.1	CmoCh03G012120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003743	translation initiation factor activity