CmoCh03G010940 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G010940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Cationic amino acid transporter
Location	Cmo_Chr03: 8704038 .. 8705763 (+)
RNA-Seq Expression	CmoCh03G010940
Synteny	CmoCh03G010940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGGTGCTGCAGGCGTGGGCTGCTGTAAGTAGATTGGGCCGAGAACTTGGTTTGGGATTCGAGTTGGTGGGATGTAGGTCTAGGTTTGTAGTGCGGCAGTAGGCAAAGATCAACGGATGGGCAGTGGATTATGAGTTGAGTTCGACCCGAATTCAGATCTGTCGGATTCGTCTTCTTCGCCCGTATCTACGCAATTTTCTAATTTCTTTCTATCCCCTTCCTACAGCTGTTTCCGAAGTTCTTCTTCGTCGTTTTCCTCCTCTAGCTCTCTGTTAGACCTCTATTCCTCTTCCATGAATTTTCGTGGTTTGTAGATGTCTAAAATGAAAGATCGATGAGATTTCTAACGATCAAACTTCATCTCTTGCTATTGACGACAATGGACGTTTGGGAGGCACGCAAACGTACCTTAGGTGATCGTTTAGTTCTTGGGAATTTTTTTCACGCTATGAGTCAATCGTTTTAGGCGTCGAGGTTCGTGGTTCAAACTTGTCAAAAAATGTCTCGATCTCTCTTTATGGTTTTTCTTTTTCATTCTATGTTGCAGGTGCTCCAGGGGTGTATGGCTAGAGGCTACGTCGTTTGGAGGGTCGTGGGGCACACTGTGAGCAGCGGGGAGTGTGTCCTTATCTAGTGGGCTAGAATTCTGCCATTGGTCAAAATTCTCACTGTCTACCGGCGGTCGATGCTCTTTTTTTTCTTTCTTTCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTGTTTCACTCCCTTGTGGAGTTTGTATCGTTTGTGAGCATTATTCTCGTTTCATTTTATCAATGGAAGGTTTTGTCTCTTGTTAAAAAAATCAATGACTAGAAAAAGGTTTGATGAGAATGAAAAATATATGTAATGAACGTTTGAAGTTGAACTTGTCTGCAGGTTATCATTGTCGTGTGTGTCATCTTTGCTGGTGCTTTTGAGGTTGATGTTTCAAATTGGTCTCCTTTTTCTCCAAATGGTTTCCAATCAGTGTTAACTGGAGCTACTGTAGTATTCTTCGCATATGTAGGCTTCGATGCAGTTGCAAATTCAGCCGAAGAATCAAAAAGTCCGAGGGTATTAAACTAAGTTGCTTCCCTTTATGTTTGAGTACCACGATTCACTCAATTTTGTAACTTCAAATAGTAGCATAAACTTCGTAAGATTTAAAGCAACTGACTTTTCCTTTTTAATATTGTTCCGTTCAGAGGGATTTACCAATTGGCATAATCGGAAGTCTTCTTATTTGCATTGCTCTATATATTGGAGTCTGCTTAGTGATTACTGGAATGGTTCCTTATTATCTTCTTGGGGAAGATGCTCCCTTGGCTGAAGCTTTTACATCCAAAGGCTTGAAATTTGTTTCTTTCTTGATAAGCGTTGGTGCTATTGCTGGACTTACAACGACCCTTCTTGTTGGTCTTTATGTTCAGGTGATTTATTTCAGACTCAATAACTATTTGCGTTTACTTCACATTTTGTATTTATGCCAATTGATGGGGTGTGCAAAACAGTCTCGTCTATATCTTGGGCTTGGGAGAGATGGTTTGCTGCCTTCTTTTTTTTCTGAAGTGGACTCCAAACACCACACTCCTATCACTTCTCAAGTCTGGGTTGGTATTGTAGCTGGCGTGTTGGCTGGACTANTTACAATATCTATAAGGACTTTCATCCATAGGATTCTTATGTTATGTTATGCTATTTCATAA

mRNA sequence

ATGCGGGTGCTGCAGGCGTGGGCTGCTGTGCTCCAGGGGTGTATGGCTAGAGGCTACGTCGTTTGGAGGGTCGTGGGGCACACTGTTATCATTGTCGTGTGTGTCATCTTTGCTGGTGCTTTTGAGGTTGATGTTTCAAATTGGTCTCCTTTTTCTCCAAATGGTTTCCAATCAGTGTTAACTGGAGCTACTGTAGTATTCTTCGCATATGTAGGCTTCGATGCAGTTGCAAATTCAGCCGAAGAATCAAAAAGTCCGAGGAGGGATTTACCAATTGGCATAATCGGAAGTCTTCTTATTTGCATTGCTCTATATATTGGAGTCTGCTTAGTGATTACTGGAATGGTTCCTTATTATCTTCTTGGGGAAGATGCTCCCTTGGCTGAAGCTTTTACATCCAAAGGCTTGAAATTTGTTTCTTTCTTGATAAGCGTTGGTGCTATTGCTGGACTTACAACGACCCTTCTTGTTGGTCTTTATGTTCAGTCTCGTCTATATCTTGGGCTTGGGAGAGATGGTTTGCTGCCTTCTTTTTTTTCTGAAGTGGACTCCAAACACCACACTCCTATCACTTCTCAAGTCTGGGTTGGTATTGTAGCTGGCGTGTTGGCTGGACTANTTACAATATCTATAAGGACTTTCATCCATAGGATTCTTATGTTATGTTATGCTATTTCATAA

Coding sequence (CDS)

ATGCGGGTGCTGCAGGCGTGGGCTGCTGTGCTCCAGGGGTGTATGGCTAGAGGCTACGTCGTTTGGAGGGTCGTGGGGCACACTGTTATCATTGTCGTGTGTGTCATCTTTGCTGGTGCTTTTGAGGTTGATGTTTCAAATTGGTCTCCTTTTTCTCCAAATGGTTTCCAATCAGTGTTAACTGGAGCTACTGTAGTATTCTTCGCATATGTAGGCTTCGATGCAGTTGCAAATTCAGCCGAAGAATCAAAAAGTCCGAGGAGGGATTTACCAATTGGCATAATCGGAAGTCTTCTTATTTGCATTGCTCTATATATTGGAGTCTGCTTAGTGATTACTGGAATGGTTCCTTATTATCTTCTTGGGGAAGATGCTCCCTTGGCTGAAGCTTTTACATCCAAAGGCTTGAAATTTGTTTCTTTCTTGATAAGCGTTGGTGCTATTGCTGGACTTACAACGACCCTTCTTGTTGGTCTTTATGTTCAGTCTCGTCTATATCTTGGGCTTGGGAGAGATGGTTTGCTGCCTTCTTTTTTTTCTGAAGTGGACTCCAAACACCACACTCCTATCACTTCTCAAGTCTGGGTTGGTATTGTAGCTGGCGTGTTGGCTGGACTANTTACAATATCTATAAGGACTTTCATCCATAGGATTCTTATGTTATGTTATGCTATTTCATAA

Protein sequence

MRVLQAWAAVLQGCMARGYVVWRVVGHTVIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGLXTISIRTFIHRILMLCYAIS

Homology

[Close]

BLAST of CmoCh03G010940 vs. ExPASy Swiss-Prot
Match: Q9C5D6 (Cationic amino acid transporter 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAT9 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.7e-77
Identity = 142/181 (78.45%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 88
           V+IV+ VI AGAFE+DV+NWSPF+PNGF++VLTGATVVFF+YVGFDAVANSAEESK+P+R
Sbjct: 221 VVIVLVVICAGAFEIDVANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESKNPQR 280

Query: 89  DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI 148
           DLPIGI+GSLL+CI+LYIGVCLV+TGMVP+ LL EDAPLAEAF+SKG+KFVS LIS+GA+
Sbjct: 281 DLPIGIMGSLLVCISLYIGVCLVLTGMVPFSLLSEDAPLAEAFSSKGMKFVSILISIGAV 340

Query: 149 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGLXT 208
           AGLTTTLLVGLYVQSRLYLGLGRDGLLPS FS +    HTP+ SQ+W GIVAGVLAG+  
Sbjct: 341 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFSRIHPTLHTPLHSQIWCGIVAGVLAGIFN 400

Query: 209 I 210
           +
Sbjct: 401 V 401

[Close]

BLAST of CmoCh03G010940 vs. ExPASy Swiss-Prot
Match: Q797A7 (Methylthioribose transporter OS=Bacillus subtilis (strain 168) OX=224308 GN=mtrA PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.6e-37
Identity = 85/192 (44.27%), Postives = 118/192 (61.46%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 88
           + I++  I  G   V   NWSPF P G + V+  A  VFFAY+GFDAV+N++EE K+P++
Sbjct: 191 IAIILLFIIVGIGYVKPDNWSPFMPFGMKGVILSAATVFFAYLGFDAVSNASEEVKNPQK 250

Query: 89  DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI 148
           ++P+GII +L +C  LYI V LV+TGM+PY  L    P++ A    G   V+ +ISVGAI
Sbjct: 251 NMPVGIISALAVCTVLYIAVSLVLTGMMPYAKLNVGDPVSFALKFVGQDAVAGIISVGAI 310

Query: 149 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGLXT 208
            G+TT +L  LY Q RL   + RDGLLP  F++V     TP  +    GIVA  +AG   
Sbjct: 311 IGITTVMLALLYAQVRLTFAMSRDGLLPGLFAKVHPSFKTPFRNTWLTGIVAAGIAGF-- 370

Query: 209 ISIRTFIHRILM 221
           I++ T  H + M
Sbjct: 371 INLGTLAHLVNM 380

[Close]

BLAST of CmoCh03G010940 vs. ExPASy Swiss-Prot
Match: Q8GYB4 (Cationic amino acid transporter 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CAT3 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.7e-37
Identity = 78/188 (41.49%), Postives = 121/188 (64.36%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNW------SPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEE 88
           V +++ VI AG++    + W      + + P G   +LTG+  VFFAY+GFD VA+ AEE
Sbjct: 197 VFVMIFVIVAGSYLCFKTGWVGYELPTGYFPYGVDGMLTGSATVFFAYIGFDTVASMAEE 256

Query: 89  SKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFL 148
            K+PRRDLP+GI  SLL+C  LY+ V +VI G+VPYY +  D P++ AF+S G+++ ++L
Sbjct: 257 VKNPRRDLPLGIGISLLLCCLLYMMVSVVIVGLVPYYAMDPDTPISSAFSSHGIQWAAYL 316

Query: 149 ISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGV 208
           I++GA+  L + L+  +  Q R+ + + RDGLLPS+FS V+ +   PI   +  G+ A +
Sbjct: 317 INLGAVMALCSALMGSILPQPRILMAMARDGLLPSYFSYVNQRTQVPINGTITTGVCAAI 376

Query: 209 LAGLXTIS 211
           LA    +S
Sbjct: 377 LAFFMDVS 384

[Close]

BLAST of CmoCh03G010940 vs. ExPASy Swiss-Prot
Match: Q8W4K3 (Cationic amino acid transporter 4, vacuolar OS=Arabidopsis thaliana OX=3702 GN=CAT4 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 75/187 (40.11%), Postives = 117/187 (62.57%), Query Frame = 0


Query: 24  VVGHTVIIVVCVIFAGAFEVDVSNW------SPFSPNGFQSVLTGATVVFFAYVGFDAVA 83
           V    V  +V +I  G +    + W      S + P G   +L G+ VVFF+Y+GFD V 
Sbjct: 187 VTSVNVCTLVFIIVVGGYLACKTGWVGYDLPSGYFPFGLNGILAGSAVVFFSYIGFDTVT 246

Query: 84  NSAEESKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLK 143
           ++AEE K+P+RDLP+GI  +LLIC  LY+ + +VI G+VPYY L  D P++ AF   G++
Sbjct: 247 STAEEVKNPQRDLPLGIGIALLICCILYMLLSVVIVGLVPYYSLNPDTPISSAFGDSGMQ 306

Query: 144 FVSFLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVG 203
           + +++++ GAI  L  +LL  L  Q R+++ + RDGLLP+FFSE+  +   P+ S + +G
Sbjct: 307 WAAYILTTGAITALCASLLGSLLAQPRIFMAMARDGLLPAFFSEISPRTQVPVKSTIAIG 366

Query: 204 IVAGVLA 205
           ++A  LA
Sbjct: 367 VLAAALA 373

[Close]

BLAST of CmoCh03G010940 vs. ExPASy Swiss-Prot
Match: O07576 (Uncharacterized amino acid permease YhdG OS=Bacillus subtilis (strain 168) OX=224308 GN=yhdG PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-35
Identity = 75/179 (41.90%), Postives = 115/179 (64.25%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 88
           +++V+  I   A  V   NW PF P GF  V + A +VFFA++GFDAV+++AEE+K+P +
Sbjct: 194 ILVVLLFIAVAAVYVKPHNWQPFMPMGFGGVFSAAALVFFAFIGFDAVSSAAEETKNPAK 253

Query: 89  DLPIGIIGSLLICIALYIGVCLVITGMVPY-YLLGEDAPLAEAFTSKGLKFVSFLISVGA 148
           DLP GII SLL+C  LY+ V  ++TG++P+    G D P++    S G  +V+ +I +GA
Sbjct: 254 DLPKGIIFSLLVCTILYVTVSAIMTGVIPFAQFAGVDHPVSLVLQSAGQNWVAGIIDIGA 313

Query: 149 IAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGL 207
           + G+TT +LV LY Q+R+   + RDGL+P   S+V  KH TP  +  + G ++ +L  L
Sbjct: 314 VLGMTTVMLVMLYGQTRVMFAMSRDGLVPGSLSKVHPKHKTPYVATWFFGTMSALLGSL 372

[Close]

BLAST of CmoCh03G010940 vs. ExPASy TrEMBL
Match: A0A6J1EXC4 (cationic amino acid transporter 9, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439233 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.5e-119
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MRVLQAWAAVLQGCMARGYVVWRVVGHTVIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVL 60
           MRVLQAWAAVLQGCMARGYVVWRVVGHTVIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVL
Sbjct: 1   MRVLQAWAAVLQGCMARGYVVWRVVGHTVIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVL 60

Query: 61  TGATVVFFAYVGFDAVANSAEESKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYL 120
           TGATVVFFAYVGFDAVANSAEESKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYL
Sbjct: 61  TGATVVFFAYVGFDAVANSAEESKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYL 120

Query: 121 LGEDAPLAEAFTSKGLKFVSFLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFS 180
           LGEDAPLAEAFTSKGLKFVSFLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFS
Sbjct: 121 LGEDAPLAEAFTSKGLKFVSFLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFS 180

Query: 181 EVDSKHHTPITSQVWVGIVAGVLAGLXTISIRTFIHRILMLCYAIS 227
           EVDSKHHTPITSQVWVGIVAGVLAGLXTISIRTFIHRILMLCYAIS
Sbjct: 181 EVDSKHHTPITSQVWVGIVAGVLAGLXTISIRTFIHRILMLCYAIS 226

[Close]

BLAST of CmoCh03G010940 vs. ExPASy TrEMBL
Match: A0A6J1H8I3 (cationic amino acid transporter 9, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460623 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.7e-92
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 88
           VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR
Sbjct: 220 VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 279

Query: 89  DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI 148
           DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI
Sbjct: 280 DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI 339

Query: 149 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGLXT 208
           AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGL  
Sbjct: 340 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGLFN 399

Query: 209 I 210
           I
Sbjct: 400 I 400

[Close]

BLAST of CmoCh03G010940 vs. ExPASy TrEMBL
Match: A0A6J1L103 (cationic amino acid transporter 9, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498116 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.3e-91
Identity = 177/181 (97.79%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 88
           VIIVVCVIFAGAFEVDVSNWSPFSPNG QSVLTGATVVFFAYVGFDAVANSAEESKSPRR
Sbjct: 221 VIIVVCVIFAGAFEVDVSNWSPFSPNGLQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 280

Query: 89  DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI 148
           DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI
Sbjct: 281 DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI 340

Query: 149 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGLXT 208
           AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVD+KHHTPITSQVWVGIVAGVLAGL  
Sbjct: 341 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDAKHHTPITSQVWVGIVAGVLAGLFN 400

Query: 209 I 210
           I
Sbjct: 401 I 401

[Close]

BLAST of CmoCh03G010940 vs. ExPASy TrEMBL
Match: A0A6J1DSD2 (cationic amino acid transporter 9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023864 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.6e-86
Identity = 170/188 (90.43%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 88
           VIIVVCVIFAGAFEVDVSNWSPF+PNGF +VLTGATVVFFAYVGFDAVANSAEESKSPRR
Sbjct: 153 VIIVVCVIFAGAFEVDVSNWSPFAPNGFNAVLTGATVVFFAYVGFDAVANSAEESKSPRR 212

Query: 89  DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI 148
           DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAF SKGLKFVSFLIS+GA+
Sbjct: 213 DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFASKGLKFVSFLISIGAV 272

Query: 149 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGLXT 208
           AGLTTTLLVGLYVQSRLYLGLGRDGLLPS FSEV  K HTPI SQVWVGIVAGVLAGL  
Sbjct: 273 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFSEVHPKRHTPIISQVWVGIVAGVLAGL-- 332

Query: 209 ISIRTFIH 217
            +IR+  H
Sbjct: 333 FNIRSLSH 338

[Close]

BLAST of CmoCh03G010940 vs. ExPASy TrEMBL
Match: A0A0A0K9Y0 (AA_permease_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104080 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.5e-84
Identity = 165/181 (91.16%), Postives = 171/181 (94.48%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 88
           VIIVVCVI  GAFEVDVSNWSPF+PNGF +VLTGATVVFFAYVGFDAVANSAEESK+PRR
Sbjct: 226 VIIVVCVILTGAFEVDVSNWSPFTPNGFHAVLTGATVVFFAYVGFDAVANSAEESKNPRR 285

Query: 89  DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI 148
           DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGE+APLA AFTSKGLKFVSFLISVGAI
Sbjct: 286 DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEEAPLAAAFTSKGLKFVSFLISVGAI 345

Query: 149 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGLXT 208
           AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFS+V  K HTPI SQVWVGI+AGVLAGL  
Sbjct: 346 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSDVHPKRHTPIISQVWVGIIAGVLAGLFN 405

Query: 209 I 210
           I
Sbjct: 406 I 406

[Close]

BLAST of CmoCh03G010940 vs. TAIR 10
Match: AT1G05940.1 (cationic amino acid transporter 9 )

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-78
Identity = 142/181 (78.45%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNWSPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEESKSPRR 88
           V+IV+ VI AGAFE+DV+NWSPF+PNGF++VLTGATVVFF+YVGFDAVANSAEESK+P+R
Sbjct: 221 VVIVLVVICAGAFEIDVANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESKNPQR 280

Query: 89  DLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFLISVGAI 148
           DLPIGI+GSLL+CI+LYIGVCLV+TGMVP+ LL EDAPLAEAF+SKG+KFVS LIS+GA+
Sbjct: 281 DLPIGIMGSLLVCISLYIGVCLVLTGMVPFSLLSEDAPLAEAFSSKGMKFVSILISIGAV 340

Query: 149 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGVLAGLXT 208
           AGLTTTLLVGLYVQSRLYLGLGRDGLLPS FS +    HTP+ SQ+W GIVAGVLAG+  
Sbjct: 341 AGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFSRIHPTLHTPLHSQIWCGIVAGVLAGIFN 400

Query: 209 I 210
           +
Sbjct: 401 V 401

[Close]

BLAST of CmoCh03G010940 vs. TAIR 10
Match: AT5G36940.1 (cationic amino acid transporter 3 )

HSP 1 Score: 155.2 bits (391), Expect = 6.1e-38
Identity = 78/188 (41.49%), Postives = 121/188 (64.36%), Query Frame = 0


Query: 29  VIIVVCVIFAGAFEVDVSNW------SPFSPNGFQSVLTGATVVFFAYVGFDAVANSAEE 88
           V +++ VI AG++    + W      + + P G   +LTG+  VFFAY+GFD VA+ AEE
Sbjct: 197 VFVMIFVIVAGSYLCFKTGWVGYELPTGYFPYGVDGMLTGSATVFFAYIGFDTVASMAEE 256

Query: 89  SKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLKFVSFL 148
            K+PRRDLP+GI  SLL+C  LY+ V +VI G+VPYY +  D P++ AF+S G+++ ++L
Sbjct: 257 VKNPRRDLPLGIGISLLLCCLLYMMVSVVIVGLVPYYAMDPDTPISSAFSSHGIQWAAYL 316

Query: 149 ISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVGIVAGV 208
           I++GA+  L + L+  +  Q R+ + + RDGLLPS+FS V+ +   PI   +  G+ A +
Sbjct: 317 INLGAVMALCSALMGSILPQPRILMAMARDGLLPSYFSYVNQRTQVPINGTITTGVCAAI 376

Query: 209 LAGLXTIS 211
           LA    +S
Sbjct: 377 LAFFMDVS 384

[Close]

BLAST of CmoCh03G010940 vs. TAIR 10
Match: AT3G03720.1 (cationic amino acid transporter 4 )

HSP 1 Score: 151.4 bits (381), Expect = 8.9e-37
Identity = 75/187 (40.11%), Postives = 117/187 (62.57%), Query Frame = 0


Query: 24  VVGHTVIIVVCVIFAGAFEVDVSNW------SPFSPNGFQSVLTGATVVFFAYVGFDAVA 83
           V    V  +V +I  G +    + W      S + P G   +L G+ VVFF+Y+GFD V 
Sbjct: 388 VTSVNVCTLVFIIVVGGYLACKTGWVGYDLPSGYFPFGLNGILAGSAVVFFSYIGFDTVT 447

Query: 84  NSAEESKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLK 143
           ++AEE K+P+RDLP+GI  +LLIC  LY+ + +VI G+VPYY L  D P++ AF   G++
Sbjct: 448 STAEEVKNPQRDLPLGIGIALLICCILYMLLSVVIVGLVPYYSLNPDTPISSAFGDSGMQ 507

Query: 144 FVSFLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVG 203
           + +++++ GAI  L  +LL  L  Q R+++ + RDGLLP+FFSE+  +   P+ S + +G
Sbjct: 508 WAAYILTTGAITALCASLLGSLLAQPRIFMAMARDGLLPAFFSEISPRTQVPVKSTIAIG 567

Query: 204 IVAGVLA 205
           ++A  LA
Sbjct: 568 VLAAALA 574

[Close]

BLAST of CmoCh03G010940 vs. TAIR 10
Match: AT3G03720.2 (cationic amino acid transporter 4 )

HSP 1 Score: 151.4 bits (381), Expect = 8.9e-37
Identity = 75/187 (40.11%), Postives = 117/187 (62.57%), Query Frame = 0


Query: 24  VVGHTVIIVVCVIFAGAFEVDVSNW------SPFSPNGFQSVLTGATVVFFAYVGFDAVA 83
           V    V  +V +I  G +    + W      S + P G   +L G+ VVFF+Y+GFD V 
Sbjct: 187 VTSVNVCTLVFIIVVGGYLACKTGWVGYDLPSGYFPFGLNGILAGSAVVFFSYIGFDTVT 246

Query: 84  NSAEESKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLK 143
           ++AEE K+P+RDLP+GI  +LLIC  LY+ + +VI G+VPYY L  D P++ AF   G++
Sbjct: 247 STAEEVKNPQRDLPLGIGIALLICCILYMLLSVVIVGLVPYYSLNPDTPISSAFGDSGMQ 306

Query: 144 FVSFLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVG 203
           + +++++ GAI  L  +LL  L  Q R+++ + RDGLLP+FFSE+  +   P+ S + +G
Sbjct: 307 WAAYILTTGAITALCASLLGSLLAQPRIFMAMARDGLLPAFFSEISPRTQVPVKSTIAIG 366

Query: 204 IVAGVLA 205
           ++A  LA
Sbjct: 367 VLAAALA 373

[Close]

BLAST of CmoCh03G010940 vs. TAIR 10
Match: AT1G58030.1 (cationic amino acid transporter 2 )

HSP 1 Score: 142.5 bits (358), Expect = 4.1e-34
Identity = 73/193 (37.82%), Postives = 120/193 (62.18%), Query Frame = 0


Query: 24  VVGHTVIIVVCVIFAGAFEVDVSNW------SPFSPNGFQSVLTGATVVFFAYVGFDAVA 83
           V    V +++ VI AG++    + W      + F P G   +  G+  VFFA++GFD+VA
Sbjct: 203 VTAVNVCVLLFVIVAGSYLGFKTGWPGYELPTGFFPFGVDGMFAGSATVFFAFIGFDSVA 262

Query: 84  NSAEESKSPRRDLPIGIIGSLLICIALYIGVCLVITGMVPYYLLGEDAPLAEAFTSKGLK 143
           ++AEE ++P+RDLPIGI  +LL+C +LY+ V +VI G++PYY +  D P++ AF S  ++
Sbjct: 263 STAEEVRNPQRDLPIGIGLALLLCCSLYMMVSIVIVGLIPYYAMDPDTPISSAFASHDMQ 322

Query: 144 FVSFLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSEVDSKHHTPITSQVWVG 203
           +  +LI++GA+  L + L+  L  Q R+ + + RDGLLPS FS+++ +   P+ + V  G
Sbjct: 323 WAVYLITLGAVMALCSALMGALLPQPRILMAMARDGLLPSIFSDINKRTQVPVKATVATG 382

Query: 204 IVAGVLAGLXTIS 211
           + A  LA    +S
Sbjct: 383 LCAATLAFFMDVS 395

The following BLAST results are available for this feature:

BLAST of CmoCh03G010940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5D6	1.7e-77	78.45	Cationic amino acid transporter 9, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q797A7	6.6e-37	44.27	Methylthioribose transporter OS=Bacillus subtilis (strain 168) OX=224308 GN=mtrA...	[more]
Q8GYB4	8.7e-37	41.49	Cationic amino acid transporter 3, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q8W4K3	1.2e-35	40.11	Cationic amino acid transporter 4, vacuolar OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
O07576	3.6e-35	41.90	Uncharacterized amino acid permease YhdG OS=Bacillus subtilis (strain 168) OX=22...	[more]

BLAST of CmoCh03G010940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXC4	5.5e-119	100.00	cationic amino acid transporter 9, chloroplastic-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1H8I3	5.7e-92	98.90	cationic amino acid transporter 9, chloroplastic-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1L103	6.3e-91	97.79	cationic amino acid transporter 9, chloroplastic OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1DSD2	3.6e-86	90.43	cationic amino acid transporter 9, chloroplastic OS=Momordica charantia OX=3673 ...	[more]
A0A0A0K9Y0	1.5e-84	91.16	AA_permease_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1040...	[more]

BLAST of CmoCh03G010940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05940.1	1.2e-78	78.45	cationic amino acid transporter 9	[more]
AT5G36940.1	6.1e-38	41.49	cationic amino acid transporter 3	[more]
AT3G03720.1	8.9e-37	40.11	cationic amino acid transporter 4	[more]
AT3G03720.2	8.9e-37	40.11	cationic amino acid transporter 4	[more]
AT1G58030.1	4.1e-34	37.82	cationic amino acid transporter 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002293	Amino acid/polyamine transporter I	PFAM	PF13520	AA_permease_2	coord: 21..218 e-value: 2.0E-27 score: 96.1
None	No IPR available	GENE3D	1.20.1740.10	Amino acid/polyamine transporter I	coord: 8..225 e-value: 1.9E-47 score: 163.9
None	No IPR available	PANTHER	PTHR43243	INNER MEMBRANE TRANSPORTER YGJI-RELATED	coord: 28..210
None	No IPR available	PANTHER	PTHR43243:SF72	CATIONIC AMINO ACID TRANSPORTER 9-RELATED	coord: 28..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G010940.1	CmoCh03G010940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0015171	amino acid transmembrane transporter activity
molecular_function	GO:0022857	transmembrane transporter activity