CmoCh03G010250 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGCACTGCCTCTGCCACTTCCAATTCTCTTTGTTTTGTCTCAGTTCTTCTGGAAAAAACTTTCTCATTTCATATGAAATGGAGAAATTCCTTGTCGGGTTAGTTTCTACAGCACGAAAGGCATAACAATCTGAGCACCTACACCTAGACAGAAAAGACCCTATGAATGGTAAGTTTCACTGCTCCCTCTTATTGGCTTTGGGCATTTCCTGTGCAACTTAGATGGAGGTCGATGAAGGCCAGGATGCCATATTTGGCTCTGAATAGTGATCCCCTTAATGGAGGAGATGATTAATTCTGATATCAATGAGCTTAAAATTGCAGCCACCAAGCTTGGTGTAATTGATACTTCTTTGCTGCCATGTGAGTGCTTTGTAATGCAAGGGCTTGTTTGGGTTCATCTGCTCCGGACACAGTTTGTGAGCTTCTAAATATCATGTTTCTAACATCATTATGTAGTTACTTGTTGATTTTTGATCGCACAAACTGGAGAACTAACATGCTTACTTTTCTCTTCTTGTCCGACTTATTGAGGTGACAGTCACTCTCATTTCCTTGCTGGTTTGATTTATGGTTTTGAAATGTTCACAGTATCGTGTTTCTTCTTGATTTCCTTACGAGGGGATGCTGGGAAATGGATTGGCTTCGTTGCAGTGGTGTTGAGGCTCTTCTTTCCACGACATTTCCCAGGTTAGCATCATGGTCCTCTGTTTAGTTTTCCACCACTTCTTGTTCATCAGTGTCCTGTTGTTGTGTTTGATAAAGGGTTGTTTTGGATTCTTATTCTTTTATCATGCAATTGAATCCTAAACTACAAAAAGCATTTGTGATCAGTATTAACTTCAACTTTATTATTTCTTGATGGAGCAAAGATCCCACTCCATTCGAAGAGGAGAACCAAACATTCTTTATAAAGGCCTGAAAATCTCTCTCCATCATACACGTTTTTAAACGCCATATGTAACGGCCCAAAACGAACAATATCTATTAGTTATAAGTTTGGGTTGTTACAAATGGTAACAGAGTCAAATACCGGGCAGTATGCCAGCGGGGACACTGAGCCCCAAGAAAGATGGATCGTGGGAACTCATATCGTTTGTTTGGAGGGTGAAACTAAACATTTCATATAAGGGCGTGGAAACTTCTCCTTGGGACACACGTTTCAGTAGTGTGCCAACAAAGACGCTGGCCCCAAGGAAGATGGATCGAGAGATCCCCACATCGGTTGGAGAATAGAACTAAACATTTCTTATAAGAGTGTGGAAATCTCCTCCTAGAAGACTCGTTTTAGCAGTGTGCCAGCGTGGACGCGTGGCCTTAAGGAAGATGGATCATGAGACCCCACATCGGTTGGAGAGTAGAATTAAATATTTTTTATAAGGATGTGGGAACCTACTCCTAGAAGACTTTAAGTATGCCGACAATACATAACGGGCCAATGCGGACAATATTTATTAGGTATGGGTTAGGATTCTTACAAATACCGATTGTTTTATATAAAGTACCTAATAGTAATTGTCAGAAGTTTTAAATTTTAATCTAAAATTTAATATTTAGATTTTGATGAAATTGAAAAAAAAAAAGAAATTAAAAGGGTATAGGAATATCCGAGTAGCAAATGAGGTGTATGCCACGTGGAAAAAACAGAACCAGTTATGAAGCATGCAATCAGGTAATGAGATTCTTCTTATCCAATACATTATCTTACTCTAACCAAAGCCACATAATCGTTTTGTCCTCTCATTCCCAAAACCTTCCTACTCTGCCCGTTATTATAGTTTCAGTATCAGTCGCCGGAGCAGGCTTCATTTCATTTTCTCCTCTGGGAACACGAAGAGACACCAGTCTCCAGAGCAATGGCGGCTTCAGTACACGCGGCAGCTACGCTCATTCAACCCTCCAAATTGGCCGTCTCCGCCAGGAGCGGCACCTCGCAACTCAGATCTTCTCAGACCGTTTCTAAAGCTTTTGGCCTTGAATCTGCCGGAGCTAGACTCACCTGCTCTCTGCATTCCGATCTCAAAGAAGTTTCTCGGAAGTTCGCCGATGCCGCCAAGATCGCCGGCTTCGCTCTTGCCACTTCCGCTCTTGTAGTCTCGGTATGCCCTTTCTTTGCTTATGGAGGTTTGCTTTGCTTACGGTCTTGTTTGTTATTATTCTCGATGTTTTGAGTGACTTTAGGATCGTTTCGGTCCTGAGTACGTTAATTTGCCAGCTGAATTTAGTCGCTAATATTGATCGGCTTCTTTCAGTTCTATCTCGCACAAAATTGACACTTCTTGAGGAAACTAATTCTAGTTCAGAGTGTGTAGTTGATAATCTCCGATTTGGTAACTTAGTGATGATTTCTTACTAAAGAAAGGATGAAAACTCTTGATCCAAGTGGTGCAAGCATTTGAATCCGTTTAATGCTCAATTTTCTTGAAGATCCCAATTTACAGTGGCCTTGTATGTTTAGGAAGTAATTGAGTTTAGATAAAAGATTACGACAAAACTGGAGGCTAATATATGAGTTTCGTTTTGTTTACTTAATTACTTACATAACATTATTATGCAAGAATCACATAATCCTTAAATAACATATAGTTTGTGTATTAGGTATGTTGTAAATTAATAAAATATGGAATCTATTAGATACAAATCTTTTAAAAGTAGAGTCTAAAATTTCAAGGACTGTCCTGACTGAGTAGACTTGGTGTATGCAAGTGTAATGCTACAACTTGGTGAGCATCTGAACTGTTTGAGGCTTTTCGTGTATTTCCAGGGAGCAGGGGCTGAAGGAGTGCCAAAGAGACTCACCTTTGATGAAATCCAGAGCAAGACATACCTTGAAGTGAAGGGAACTGGAACAGCAAACCAGTGCCCAACCATTGATGGAGGAGTCGAGTCATTTGCCTTCAAGCCTGGGAAATACCAAGCCAAGAAGTTCTGTCTGGAGCCAACTTCGTTCACTGTGAAGGCTGAGGGAGTGAACAAGAACTCCCCACCAGAATTTCAAAACACCAAGCTCATGACTCGCCTAACTTACACCCTGGATGAGATTGAAGGACCCTTTGAAGTGGGTTCTGATGGTTCCATCAAGTTTGAGGAGAAAGATGGCATTGACTATGCTGCTGTCACTGTCCAGTTACCTGGAGGCGAGCGTGTCCCTTTCCTCTTCACCATCAAACAGCTGGTGGCCTCTGGAAAACCAGAGAGCTTTGGAGGAGACTTCTTGGTCCCATCATACCGTGGCTCATCTTTCTTGGACCCAAAGGGAAGAGGAGGTTCGACCGGGTATGACAACGCTGTTGCATTGCCTGCTGGAGGAAGAGGTGATGAAGAAGAACTTGCTAAAGAAAACGTCAAGAATGCTTCATCTTCAACAGGCAAAATCACTTTGAGTGTCACCAAGAGCAAGCCCGAGACTGGTGAAGTAATTGGTGTATTTGAGAGCATTCAGCCCTCTGATACTGATTTGGGGGCAAAAGCTCCAAAGGATGTGAAGATCCAGGGTGTCTGGTACGCTCAGCTCGATTCTTAGGCCGCCTCTCTTTCTTCCTTTATGATTGCATATTGTTCCTTGTAAGTTAAAAGGGGAAAGCTGCTAAACTTTCTTATGGAGAGAAACGATAAAAGGGGGTTCTGTTTTATCCAGTTTGCATATAAAATCTTGTGCCTTCCACTCGTCTTAAACATATATTTGCTTCACAATTCAAGATTAGATCCGCCAACTGGTAGCTGTCGATTAGAGAGCGATTAGAGAGGAGAAACGAATGTCGACAAGGATGTTGGATCTTGAAGGAGGAAGATTGAGAGATCTTACCTCGATTGAAAAAGGAAATGAGTGTCAATGAGGACGCTAGGCCGTAAAGGAGGTAGATTGTAAGATCCCCATCAGCTGGGAAGGAGAATGAAACATAAGGGTGTGAAAACATCTCCCTAACACTAAGACTTGAGGGAAAGTCCGAAAGAAAAAACATAAATATAACCGTATCGGCTAGTGATGAGCTTGGATTGTTATACTCACTCTTTAGGTATCCAATTATAATCCACAACAACTTTCATGGCCATATATAGACGAGATTTGAGAGCTTTTCCTCTCTATTTTTCTTGTATCAAC ATGCCGCACTGCCTCTGCCACTTCCAATTCTCTTTGTTTTGTCTCAGTTCTTCTGGAAAAAACTTTCTCATTTCATATGAAATGGAGAAATTCCTTGTCGGGTTAGTTTCTACAGCACGAAAGGCATAACAATCTGAGCACCTACACCTAGACAGAAAAGACCCTATGAATGCCACCAAGCTTGGTGTAATTGATACTTCTTTGCTGCCATGTGAGTGCTTTGTAATGCAAGGGCTTGTTTGGGTTCATCTGCTCCGGACACAGTTTTATCGTGTTTCTTCTTGATTTCCTTACGAGGGGATGCTGGGAAATGGATTGGCTTCGTTGCAGTGGTGTTGAGGCTCTTCTTTCCACGACATTTCCCAGAAATTAAAAGGGTATAGGAATATCCGAGTAGCAAATGAGGTGTATGCCACGTGGAAAAAACAGAACCAGTTATGAAGCATGCAATCAGTTTCAGTATCAGTCGCCGGAGCAGGCTTCATTTCATTTTCTCCTCTGGGAACACGAAGAGACACCAGTCTCCAGAGCAATGGCGGCTTCAGTACACGCGGCAGCTACGCTCATTCAACCCTCCAAATTGGCCGTCTCCGCCAGGAGCGGCACCTCGCAACTCAGATCTTCTCAGACCGTTTCTAAAGCTTTTGGCCTTGAATCTGCCGGAGCTAGACTCACCTGCTCTCTGCATTCCGATCTCAAAGAAGTTTCTCGGAAGTTCGCCGATGCCGCCAAGATCGCCGGCTTCGCTCTTGCCACTTCCGCTCTTGTAGTCTCGGGAGCAGGGGCTGAAGGAGTGCCAAAGAGACTCACCTTTGATGAAATCCAGAGCAAGACATACCTTGAAGTGAAGGGAACTGGAACAGCAAACCAGTGCCCAACCATTGATGGAGGAGTCGAGTCATTTGCCTTCAAGCCTGGGAAATACCAAGCCAAGAAGTTCTGTCTGGAGCCAACTTCGTTCACTGTGAAGGCTGAGGGAGTGAACAAGAACTCCCCACCAGAATTTCAAAACACCAAGCTCATGACTCGCCTAACTTACACCCTGGATGAGATTGAAGGACCCTTTGAAGTGGGTTCTGATGGTTCCATCAAGTTTGAGGAGAAAGATGGCATTGACTATGCTGCTGTCACTGTCCAGTTACCTGGAGGCGAGCGTGTCCCTTTCCTCTTCACCATCAAACAGCTGGTGGCCTCTGGAAAACCAGAGAGCTTTGGAGGAGACTTCTTGGTCCCATCATACCGTGGCTCATCTTTCTTGGACCCAAAGGGAAGAGGAGGTTCGACCGGGTATGACAACGCTGTTGCATTGCCTGCTGGAGGAAGAGGTGATGAAGAAGAACTTGCTAAAGAAAACGTCAAGAATGCTTCATCTTCAACAGGCAAAATCACTTTGAGTGTCACCAAGAGCAAGCCCGAGACTGGTGAAGTAATTGGTGTATTTGAGAGCATTCAGCCCTCTGATACTGATTTGGGGGCAAAAGCTCCAAAGGATGTGAAGATCCAGGGTGTCTGGTACGCTCAGCTCGATTCTTAGGCCGCCTCTCTTTCTTCCTTTATGATTGCATATTGTTCCTTGTAAGTTAAAAGGGGAAAGCTGCTAAACTTTCTTATGGAGAGAAACGATAAAAGGGGGTTCTGTTTTATCCAGTTTGCATATAAAATCTTGTGCCTTCCACTCGTCTTAAACATATATTTGCTTCACAATTCAAGATTAGATCCGCCAACTGGTAGCTGTCGATTAGAGAGCGATTAGAGAGGAGAAACGAATGTCGACAAGGATGTTGGATCTTGAAGGAGGAAGATTGAGAGATCTTACCTCGATTGAAAAAGGAAATGAGTGTCAATGAGGACGCTAGGCCGTAAAGGAGGTAGATTGTAAGATCCCCATCAGCTGGGAAGGAGAATGAAACATAAGGGTGTGAAAACATCTCCCTAACACTAAGACTTGAGGGAAAGTCCGAAAGAAAAAACATAAATATAACCGTATCGGCTAGTGATGAGCTTGGATTGTTATACTCACTCTTTAGGTATCCAATTATAATCCACAACAACTTTCATGGCCATATATAGACGAGATTTGAGAGCTTTTCCTCTCTATTTTTCTTGTATCAAC ATGAGGTGTATGCCACGTGGAAAAAACAGAACCAGTTATGAAGCATGCAATCAGTTTCAGTATCAGTCGCCGGAGCAGGCTTCATTTCATTTTCTCCTCTGGGAACACGAAGAGACACCAGTCTCCAGAGCAATGGCGGCTTCAGTACACGCGGCAGCTACGCTCATTCAACCCTCCAAATTGGCCGTCTCCGCCAGGAGCGGCACCTCGCAACTCAGATCTTCTCAGACCGTTTCTAAAGCTTTTGGCCTTGAATCTGCCGGAGCTAGACTCACCTGCTCTCTGCATTCCGATCTCAAAGAAGTTTCTCGGAAGTTCGCCGATGCCGCCAAGATCGCCGGCTTCGCTCTTGCCACTTCCGCTCTTGTAGTCTCGGGAGCAGGGGCTGAAGGAGTGCCAAAGAGACTCACCTTTGATGAAATCCAGAGCAAGACATACCTTGAAGTGAAGGGAACTGGAACAGCAAACCAGTGCCCAACCATTGATGGAGGAGTCGAGTCATTTGCCTTCAAGCCTGGGAAATACCAAGCCAAGAAGTTCTGTCTGGAGCCAACTTCGTTCACTGTGAAGGCTGAGGGAGTGAACAAGAACTCCCCACCAGAATTTCAAAACACCAAGCTCATGACTCGCCTAACTTACACCCTGGATGAGATTGAAGGACCCTTTGAAGTGGGTTCTGATGGTTCCATCAAGTTTGAGGAGAAAGATGGCATTGACTATGCTGCTGTCACTGTCCAGTTACCTGGAGGCGAGCGTGTCCCTTTCCTCTTCACCATCAAACAGCTGGTGGCCTCTGGAAAACCAGAGAGCTTTGGAGGAGACTTCTTGGTCCCATCATACCGTGGCTCATCTTTCTTGGACCCAAAGGGAAGAGGAGGTTCGACCGGGTATGACAACGCTGTTGCATTGCCTGCTGGAGGAAGAGGTGATGAAGAAGAACTTGCTAAAGAAAACGTCAAGAATGCTTCATCTTCAACAGGCAAAATCACTTTGAGTGTCACCAAGAGCAAGCCCGAGACTGGTGAAGTAATTGGTGTATTTGAGAGCATTCAGCCCTCTGATACTGATTTGGGGGCAAAAGCTCCAAAGGATGTGAAGATCCAGGGTGTCTGGTACGCTCAGCTCGATTCTTAG MRCMPRGKNRTSYEACNQFQYQSPEQASFHFLLWEHEETPVSRAMAASVHAAATLIQPSKLAVSARSGTSQLRSSQTVSKAFGLESAGARLTCSLHSDLKEVSRKFADAAKIAGFALATSALVVSGAGAEGVPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGVESFAFKPGKYQAKKFCLEPTSFTVKAEGVNKNSPPEFQNTKLMTRLTYTLDEIEGPFEVGSDGSIKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFGGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLDS Homology
BLAST of CmoCh03G010250 vs. ExPASy Swiss-Prot
Match: Q40459 (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBO PE=2 SV=1) HSP 1 Score: 568.9 bits (1465), Expect = 4.2e-161 Identity = 286/332 (86.14%), Postives = 310/332 (93.37%), Query Frame = 0
BLAST of CmoCh03G010250 vs. ExPASy Swiss-Prot
Match: P26320 (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum OX=4113 GN=PSBO PE=2 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 3.1e-156 Identity = 284/334 (85.03%), Postives = 308/334 (92.22%), Query Frame = 0
BLAST of CmoCh03G010250 vs. ExPASy Swiss-Prot
Match: P14226 (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum OX=3888 GN=PSBO PE=1 SV=1) HSP 1 Score: 550.1 bits (1416), Expect = 2.0e-155 Identity = 281/333 (84.38%), Postives = 306/333 (91.89%), Query Frame = 0
BLAST of CmoCh03G010250 vs. ExPASy Swiss-Prot
Match: P23322 (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBO PE=2 SV=2) HSP 1 Score: 549.3 bits (1414), Expect = 3.4e-155 Identity = 279/332 (84.04%), Postives = 304/332 (91.57%), Query Frame = 0
BLAST of CmoCh03G010250 vs. ExPASy Swiss-Prot
Match: Q9S841 (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBO2 PE=1 SV=1) HSP 1 Score: 541.6 bits (1394), Expect = 7.2e-153 Identity = 271/332 (81.63%), Postives = 302/332 (90.96%), Query Frame = 0
BLAST of CmoCh03G010250 vs. ExPASy TrEMBL
Match: A0A6J1GEA5 (oxygen-evolving enhancer protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453388 PE=3 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh03G010250 vs. ExPASy TrEMBL
Match: A0A6J1IV62 (oxygen-evolving enhancer protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478678 PE=3 SV=1) HSP 1 Score: 640.6 bits (1651), Expect = 4.2e-180 Identity = 330/333 (99.10%), Postives = 331/333 (99.40%), Query Frame = 0
BLAST of CmoCh03G010250 vs. ExPASy TrEMBL
Match: A0A6J1BYR9 (oxygen-evolving enhancer protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005909 PE=3 SV=1) HSP 1 Score: 622.1 bits (1603), Expect = 1.5e-174 Identity = 314/333 (94.29%), Postives = 330/333 (99.10%), Query Frame = 0
BLAST of CmoCh03G010250 vs. ExPASy TrEMBL
Match: A0A6J1HGR3 (oxygen-evolving enhancer protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111463396 PE=3 SV=1) HSP 1 Score: 616.3 bits (1588), Expect = 8.4e-173 Identity = 315/333 (94.59%), Postives = 326/333 (97.90%), Query Frame = 0
BLAST of CmoCh03G010250 vs. ExPASy TrEMBL
Match: A0A6J1KM95 (oxygen-evolving enhancer protein 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496980 PE=3 SV=1) HSP 1 Score: 614.8 bits (1584), Expect = 2.5e-172 Identity = 315/333 (94.59%), Postives = 326/333 (97.90%), Query Frame = 0
BLAST of CmoCh03G010250 vs. NCBI nr
Match: KAG6604219.1 (Oxygen-evolving enhancer protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 656.4 bits (1692), Expect = 1.5e-184 Identity = 339/340 (99.71%), Postives = 339/340 (99.71%), Query Frame = 0
BLAST of CmoCh03G010250 vs. NCBI nr
Match: XP_022950241.1 (oxygen-evolving enhancer protein 1, chloroplastic [Cucurbita moschata] >KAG7034378.1 Oxygen-evolving enhancer protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 645.2 bits (1663), Expect = 3.5e-181 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh03G010250 vs. NCBI nr
Match: XP_023544966.1 (oxygen-evolving enhancer protein 1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 642.9 bits (1657), Expect = 1.7e-180 Identity = 331/333 (99.40%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh03G010250 vs. NCBI nr
Match: XP_022978844.1 (oxygen-evolving enhancer protein 1, chloroplastic [Cucurbita maxima]) HSP 1 Score: 640.6 bits (1651), Expect = 8.6e-180 Identity = 330/333 (99.10%), Postives = 331/333 (99.40%), Query Frame = 0
BLAST of CmoCh03G010250 vs. NCBI nr
Match: XP_038882154.1 (oxygen-evolving enhancer protein 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 623.6 bits (1607), Expect = 1.1e-174 Identity = 322/334 (96.41%), Postives = 330/334 (98.80%), Query Frame = 0
BLAST of CmoCh03G010250 vs. TAIR 10
Match: AT3G50820.1 (photosystem II subunit O-2 ) HSP 1 Score: 541.6 bits (1394), Expect = 5.1e-154 Identity = 271/332 (81.63%), Postives = 302/332 (90.96%), Query Frame = 0
BLAST of CmoCh03G010250 vs. TAIR 10
Match: AT5G66570.1 (PS II oxygen-evolving complex 1 ) HSP 1 Score: 531.6 bits (1368), Expect = 5.3e-151 Identity = 264/332 (79.52%), Postives = 295/332 (88.86%), Query Frame = 0
BLAST of CmoCh03G010250 vs. TAIR 10
Match: AT4G37230.1 (Photosystem II manganese-stabilising protein (PsbO) family ) HSP 1 Score: 135.6 bits (340), Expect = 8.4e-32 Identity = 91/171 (53.22%), Postives = 100/171 (58.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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