
CmoCh03G009650 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATGACTGAATGCGAAAGGGATATTTAGGATAGCAAACAAAAGACCGATGTAAAGGCTTTATCACAAGTTTTTATTCATTCCTACTAGGCTGTTCTGTCCTCATTATTGCTACTGAATACCCAATTTATAATGCGTTGGTCAGTAGTATTTAAAAGAAAATATAAAATCTATCAAACTGTAGTCCTTTGAATTAATGATTTTCTCAGACTAGAAGTTATTCCAGAAACAGATTCTGAGTTTCTGAGCCACTTCTTGTTTTGTTAATGGACTTTCTTTTCCCAGACTGTTCTGGGGACTCAAGGTTCAATACTGCCTCAGGTAAACAGGAAAAGGGGGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCACATGAAAAGGAGTACATGAGAATGGCCATGTTAAAGCATGAAGAAACATTCAAACAACAGGTTTTTCTCCAATTTTGATCTTCAGTTTGCATTTTTTTCTTTTTCTTTTTTGTTTCTAACCCAAAACAACCATGCAATTATAACACTGTTAAAGATGCATCTCTGCATTCTGACCACTGATTTTTCCAATCTGTCCATCTTAACAAAAACATATTCAACTTGATCCATAATTTTGATAGTACTTCCGCTTTTTCTTTTCATGTTAGTTAATAAATATGGGCGTTTTGAATTTCTTGTGGTTCGATCTGAGAAAAGTGCGGTGCAACTTTTTAAAGTGGGGGAAAAGAAAAATCTAGAATTTGTGGTGGCAGGGCAATGGATGGATTGGATTGGATTCGTAGTTTTTGTCCATTTAGGGTTTTTGTCATATATCTCATAATCTTCTATGGGCTACATCATTGAAAAAAAAAAACATTCATTAGCCCATAGAAAACCCATATATCTTTATAATTGATATTTAACATCATTGAATGGGTTCGTCCATTGGAAGTTAAATGTTGTTATTAGATACAAAATTTAATTTCATGTATATCAAATTTGTTAATTGAAAAAAACGTTGAATATACTAAAAAAAACTATTAAACCTTTACTGACATGTTTATTATTTTTAAAGTAGAGAGAGATGTATTATACTTTCATGAAAAAAGTGAAAGAGGTTTAATGTTCTAAGGTTGGGAGGACTATATATTGCAGGTACACGAACTTCATCGGCTTTATCGAACCCAAAAGACATTAATGAAAAACGTCGAGAAAAGCAGGGATAGTGGATGGAATCCAAAGAGTTGGGACAAAAGGAATGAGATATGCTTCAGACAAATATATGAACAGGACGCAAAAAACTATTCTAGATCAACAACTCAGACGACCAAACTAGACTTGGAACAGCCGGCGGAAGATGAAGCAGAGGCCAATAATGGAGCTCTGCAGATCATAAACGAGAATGAACTGGAACTAACTCTAGGCCCTTCGAGTTACAATACTTCGGACTCGGGAATAACCACCCACTCTTCTTCTTCGACAGGGTCCAGCCATGAGGGAAGACGTATGGATAGAAAGCAAGTTAGAGGGCAGGAAATGGCGGTTTTGGGGGTACCTGAAAATCCCTCGGGATTCCAAAACGGAAGTGATAGGGGAGAGAAGAAGATGGTAGAGGTAGATTACCCTCCTTGGCTTTTTCAAGCTGTGAGCCTTAACATGACTTAGTTTTCGAGGTATAAAGAAAACCCATTCATTTCAATCAATCAATCAAATTATATGAGAAGAACAATATCTTTGGTTGCTTCTCATTCACTAATTAACAGAGTCATTGATGTTTAGTGCTATTCAGCTTCCTTCTTCATCTTGCTTGTATATCCAGATGTTGATGTGTATTGCTTTGTAAATTTTAACTTTCATCAAAGAATCACCTTTGAATTTCAAGCTATTATTAATGTGACTTGAGAGAGGCCCAAGGGGGAATTATATGTATTTCTTTTAATACATATAATCTATTATGTATTTATTACATAATCAAGGCAATCTTAAAAATACATATAGG TAATGACTGAATGCGAAAGGGATATTTAGGATAGCAAACAAAAGACCGATGTAAAGGCTTTATCACAAGTTTTTATTCATTCCTACTAGGCTGTTCTGTCCTCATTATTGCTACTGAATACCCAATTTATAATGCGTTGGTCAGTAGTATTTAAAAGAAAATATAAAATCTATCAAACTGTAGTCCTTTGAATTAATGATTTTCTCAGACTAGAAGTTATTCCAGAAACAGATTCTGAGTTTCTGAGCCACTTCTTGTTTTGTTAATGGACTTTCTTTTCCCAGACTGTTCTGGGGACTCAAGGTTCAATACTGCCTCAGGTAAACAGGAAAAGGGGGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCACATGAAAAGGAGTACATGAGAATGGCCATGTTAAAGCATGAAGAAACATTCAAACAACAGGTACACGAACTTCATCGGCTTTATCGAACCCAAAAGACATTAATGAAAAACGTCGAGAAAAGCAGGGATAGTGGATGGAATCCAAAGAGTTGGGACAAAAGGAATGAGATATGCTTCAGACAAATATATGAACAGGACGCAAAAAACTATTCTAGATCAACAACTCAGACGACCAAACTAGACTTGGAACAGCCGGCGGAAGATGAAGCAGAGGCCAATAATGGAGCTCTGCAGATCATAAACGAGAATGAACTGGAACTAACTCTAGGCCCTTCGAGTTACAATACTTCGGACTCGGGAATAACCACCCACTCTTCTTCTTCGACAGGGTCCAGCCATGAGGGAAGACGTATGGATAGAAAGCAAGTTAGAGGGCAGGAAATGGCGGTTTTGGGGGTACCTGAAAATCCCTCGGGATTCCAAAACGGAAGTGATAGGGGAGAGAAGAAGATGGTAGAGGTAGATTACCCTCCTTGGCTTTTTCAAGCTGTGAGCCTTAACATGACTTAGTTTTCGAGGTATAAAGAAAACCCATTCATTTCAATCAATCAATCAAATTATATGAGAAGAACAATATCTTTGGTTGCTTCTCATTCACTAATTAACAGAGTCATTGATGTTTAGTGCTATTCAGCTTCCTTCTTCATCTTGCTTGTATATCCAGATGTTGATGTGTATTGCTTTGTAAATTTTAACTTTCATCAAAGAATCACCTTTGAATTTCAAGCTATTATTAATGTGACTTGAGAGAGGCCCAAGGGGGAATTATATGTATTTCTTTTAATACATATAATCTATTATGTATTTATTACATAATCAAGGCAATCTTAAAAATACATATAGG ATGGACTTTCTTTTCCCAGACTGTTCTGGGGACTCAAGGTTCAATACTGCCTCAGGTAAACAGGAAAAGGGGGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCACATGAAAAGGAGTACATGAGAATGGCCATGTTAAAGCATGAAGAAACATTCAAACAACAGGTACACGAACTTCATCGGCTTTATCGAACCCAAAAGACATTAATGAAAAACGTCGAGAAAAGCAGGGATAGTGGATGGAATCCAAAGAGTTGGGACAAAAGGAATGAGATATGCTTCAGACAAATATATGAACAGGACGCAAAAAACTATTCTAGATCAACAACTCAGACGACCAAACTAGACTTGGAACAGCCGGCGGAAGATGAAGCAGAGGCCAATAATGGAGCTCTGCAGATCATAAACGAGAATGAACTGGAACTAACTCTAGGCCCTTCGAGTTACAATACTTCGGACTCGGGAATAACCACCCACTCTTCTTCTTCGACAGGGTCCAGCCATGAGGGAAGACGTATGGATAGAAAGCAAGTTAGAGGGCAGGAAATGGCGGTTTTGGGGGTACCTGAAAATCCCTCGGGATTCCAAAACGGAAGTGATAGGGGAGAGAAGAAGATGGTAGAGGTAGATTACCCTCCTTGGCTTTTTCAAGCTGTGAGCCTTAACATGACTTAG MDFLFPDCSGDSRFNTASGKQEKGAEIPMEKLPKAHEKEYMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNVEKSRDSGWNPKSWDKRNEICFRQIYEQDAKNYSRSTTQTTKLDLEQPAEDEAEANNGALQIINENELELTLGPSSYNTSDSGITTHSSSSTGSSHEGRRMDRKQVRGQEMAVLGVPENPSGFQNGSDRGEKKMVEVDYPPWLFQAVSLNMT Homology
BLAST of CmoCh03G009650 vs. ExPASy TrEMBL
Match: A0A6J1GEC8 (uncharacterized protein LOC111453182 OS=Cucurbita moschata OX=3662 GN=LOC111453182 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of CmoCh03G009650 vs. ExPASy TrEMBL
Match: A0A6J1IUL1 (uncharacterized protein LOC111478714 OS=Cucurbita maxima OX=3661 GN=LOC111478714 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101 Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0
BLAST of CmoCh03G009650 vs. ExPASy TrEMBL
Match: A0A1S3B1P5 (uncharacterized protein LOC103484836 OS=Cucumis melo OX=3656 GN=LOC103484836 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 4.2e-79 Identity = 165/197 (83.76%), Postives = 175/197 (88.83%), Query Frame = 0
BLAST of CmoCh03G009650 vs. ExPASy TrEMBL
Match: A0A6J1KXC4 (uncharacterized protein LOC111497211 OS=Cucurbita maxima OX=3661 GN=LOC111497211 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78 Identity = 159/198 (80.30%), Postives = 177/198 (89.39%), Query Frame = 0
BLAST of CmoCh03G009650 vs. ExPASy TrEMBL
Match: A0A6J1HJS3 (uncharacterized protein LOC111463569 OS=Cucurbita moschata OX=3662 GN=LOC111463569 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.8e-77 Identity = 159/199 (79.90%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CmoCh03G009650 vs. NCBI nr
Match: KAG7034303.1 (hypothetical protein SDJN02_04030 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 446.8 bits (1148), Expect = 1.1e-121 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of CmoCh03G009650 vs. NCBI nr
Match: XP_022949937.1 (uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949938.1 uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949939.1 uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949940.1 uncharacterized protein LOC111453182 [Cucurbita moschata] >KAG6604141.1 hypothetical protein SDJN03_04750, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 388.3 bits (996), Expect = 4.6e-104 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of CmoCh03G009650 vs. NCBI nr
Match: XP_023543361.1 (uncharacterized protein LOC111803264 [Cucurbita pepo subsp. pepo] >XP_023543362.1 uncharacterized protein LOC111803264 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 384.0 bits (985), Expect = 8.7e-103 Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0
BLAST of CmoCh03G009650 vs. NCBI nr
Match: XP_022978899.1 (uncharacterized protein LOC111478714 [Cucurbita maxima] >XP_022978901.1 uncharacterized protein LOC111478714 [Cucurbita maxima] >XP_022978902.1 uncharacterized protein LOC111478714 [Cucurbita maxima] >XP_022978903.1 uncharacterized protein LOC111478714 [Cucurbita maxima]) HSP 1 Score: 378.6 bits (971), Expect = 3.6e-101 Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0
BLAST of CmoCh03G009650 vs. NCBI nr
Match: XP_038883305.1 (uncharacterized protein LOC120074293 isoform X1 [Benincasa hispida]) HSP 1 Score: 337.4 bits (864), Expect = 9.3e-89 Identity = 177/206 (85.92%), Postives = 189/206 (91.75%), Query Frame = 0
BLAST of CmoCh03G009650 vs. TAIR 10
Match: AT5G67390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 78.6 bits (192), Expect = 7.2e-15 Identity = 66/177 (37.29%), Postives = 89/177 (50.28%), Query Frame = 0
BLAST of CmoCh03G009650 vs. TAIR 10
Match: AT5G67390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). ) HSP 1 Score: 78.6 bits (192), Expect = 7.2e-15 Identity = 66/177 (37.29%), Postives = 89/177 (50.28%), Query Frame = 0
BLAST of CmoCh03G009650 vs. TAIR 10
Match: AT5G57340.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-07 Identity = 64/229 (27.95%), Postives = 95/229 (41.48%), Query Frame = 0
BLAST of CmoCh03G009650 vs. TAIR 10
Match: AT5G57340.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-07 Identity = 64/229 (27.95%), Postives = 95/229 (41.48%), Query Frame = 0
BLAST of CmoCh03G009650 vs. TAIR 10
Match: AT1G26620.1 (Plant protein of unknown function (DUF863) ) HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04 Identity = 39/132 (29.55%), Postives = 63/132 (47.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|