CmoCh03G006870 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G006870
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr03: 6034241 .. 6037172 (-)
RNA-Seq Expression	CmoCh03G006870
Synteny	CmoCh03G006870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCACATGGGTATTGAAGTGTGAAAAGCTTGTTGATGGATTTGTCTTCATGCTATATCGAAGAAGGCATCAAAGCTGCATCAATTGGCTGAGATTGTTCTCAATGGGGAACCAGTCAAGGTAACAAAATGCATTTATTAATAAGTAGAAGGCTTTTTTTTTCTCTCTTAGCACACCATTTATTAATATTTGACCCCTTGATCGAAGATTTTACATCTTAATATGTTGAGTTATACTCAGTTTGACATACATGGAAGTAATATATTCCCGTTCCCGGTCTGTTTTAGGTGTTCTGGTAATTTTAGGTCCAATGGCATGTGGTTGAAATTTGGAGGGAACCATTTTGAAAACGAGTGCATTCGTGCAAGTTGAAACTTTAATTATGCATAACTTGTATGGAATGAAATACCTGATTTTGGGAGTTCAACTACATATATATGAACAGGAGATATTGTGCATTACAAACCATCAATTAGCTTACAGTTTTGTTTTCATCCTTTCGAGGATGCATCTGTTATCCCTTTGCATAATTGTGGGTCCTTAATGCGGAGTTGGACAATGTTTATCGCCGTCCCCTGAGGCAGTGGCATGCGAAATTGCCGGCAGGTGTCAGCTGAAATAATAAACGTTGTTACTGTTCTTCATCTGCCGACAAATCTGCCGGGAGAGGGGGGAGAGGAGTTGAATCAAGAGTAATTTGGTTGTTTTGTTGTTGCCAAATCTATGATTATATTACTTTTAGGACTTGCTTATTAACTTTTATTAATTCATGACCCATTAGTCCTCCCCCACCCTGAAAAAAGATGGAAGTTGGTTAACTTGTTGCCTATTTATGGCATCAATTTCTCACTCTACATTTGCCTTGACAATTGGATCATTCATAATGACTGTCCTGACTCGACTTCTTGCCTGTCGGGGTTTTCTGCACAAATTTTGATTGTTTTTAGGTGTCTTGAGCTGTAACGAAGTAGCTTATATCTGAATCCTATTAGATTCTTATCCATAAAGTTCAGTTATGTAGGTGGTGGAGCATCACAATAAAGGGAACTTTATCTCTAATTGGAGACATATGAGAATAAAGGCAAAAATAAAGGCATTCCATTAGTGGAAATATATGAGAACACATTTGTACCGTGATTTCAACAGTACTGAATACAAGCTAGCTATGGGTACTTTACTCCCATTGCAAACAAAACGCACACAGCTATTAGGAGTAGCTCTTAGTTCACTGCCCTACAATTCTTCCTGATCTCTTGACCTCCAGTGATGCTACTCATCTTGATCATAGAATTAACAAATGCACGGTTAAAAGCTTCCTTTGAACTTGCAAACTTATAAACAAGATTCTTGGTCTTAGGAAAGTTTAGCAGAGCTTGGTCAGAAGAAAACAGGGCCTTCTTTTGAAGTATCAGTCTATAGTAATTGTTGTCAAATGTGGTTGAAGAAGTATCCATGTAAGCACCAGCATTTTTAGCCTTGTTGTTTACTGGGCATGTGTTTCTTAGACTTGCTGCAAAGGACGGATTCATCTCAGGGTCGACGTTGCTGGCTGGACAGAAGTTGCGAATTCTACCTTCAAAGGATGAGCAATGAGCAAATCCCAAGGTGTGTGCTCCTGCATCATATAACATTGACAATGCTTATGTTTACACTGAATATTCTCTGATTCTTATGAAAAATTTGTATACATACTATGCCAAACTGCTGACGTTGTGTTAGTACTTGAAATTTTCATCCTGAGTTTGTATTTTTATGTGGTTTACCTGAAAGAGCCACTAGGTCGTCCAAGGACAATCCCCTTTGGGAGAAGCTTTGTTGCAGCTGAGAAATGTTGAACCTTGGAGATGGCAATTGTATTGTTTCACTAGCCTTTGATATCCTTCCATCCTTTCTCCCTTTGGGAACATCCCATGTTGGGCCTCCAGACTGTAACACATTCACACACAAAATTATACCATTTTTCAGAGATAAAGGTGTTGAACTAAGGAAAAAGACCATTGAATTATATGGTTTCTTACAAGCACAACTGCATCCCTTGCAGCTAGAGCCACAATATCAGCACAAGAGACAACACCGGGGCAATAGGATTCCAGTTCTTTCTTTGCGTTGTCGATCACGAAAAACGAGTGCAAAGACAAATTAGGAGGCCCATCTTTCTCAGCTTTGTTGTTCCCTACTGAATTCAGCAGTACAGATGCATCACAGCCCTTCACCCAAGCAAACAAAACCAGGTTAGTTTTGTCAAACACAAAGAAGTTTAAACGTGTTGAGAATTCTAAAGAGAATACCCTTATAAAACAGTCATGAAAGTGCATCCGGAGGAGTCCCGCAGGGACAGTCTTGTCTTTGTAAGCTGCACTCTTGACAGCTTTATTAACGATGAAGTCAACACCTGGACATGTCTTCTCGTAGTAGTCTAAGCTCAGTGAACTCCCCAAAGGCAAAACAGACAGCAAAAGAATTGCAAAGTGCGAGAATACCACAGCAAATGAGGCCATGACCTACAAATATAGGTACGAAAGCTACACTCTTATCTTCGCTCTTATCTTAGTAAACGAAGCAAGTCTTGGTCCATTACCGTTAAGATTGTGTGTTATTTATAGAAAATGAAAGGTGATAGAAGAGTTGCAATACGCCGTGACATGATAGCGGCCCCAGACGTTGAACAAATGCAAATAATGACGAAGTGATTCTGAAGCAATGCTGATCCAACAACATGCACGACACTGGCTGCTGTTGCTCCTTGAACCTTCAACTTTCGGACTTAGGGAGTGGGACAACATCATGCCAAAATTTTGGTAATAATTATGTTTGCTTTGAATGAAAGATCGGGAAACCCAAAAGGGTTATACCCTCCTCTTGTTGCTATTGAGTTTCCTTTACTTCAAAAGGTAGCTCGAGAGGCCAGGATTTCTTCGTTTACAAAGTAA

mRNA sequence

ATGGTCACATGGGTATTGAAGTGTGAAAAGCTTGTTGATGGATTTGTCTTCATGCTATATCGAAGAAGGCATCAAAGCTGCATCAATTGGCTGAGATTGTTCTCAATGGGGAACCAGTCAAGTTTGACATACATGGAAGTAATATATTCCCGTTCCCGGTCTGTTTTAGGTGTTCTGGAAAGTTTAGCAGAGCTTGGTCAGAAGAAAACAGGGCCTTCTTTTGAAGTATCAGTCTATAACTTGCTGCAAAGGACGGATTCATCTCAGGGTCGACGTTGCTGGCTGGACAGAAGTTGCGAATTCTACCTTCAAAGGATGAGCAATGAGCAAATCCCAAGTACAGATGCATCACAGCCCTTCACCCAAGCAAACAAAACCAGATCGGGAAACCCAAAAGGGTTATACCCTCCTCTTGTTGCTATTGAGTTTCCTTTACTTCAAAAGGTAGCTCGAGAGGCCAGGATTTCTTCGTTTACAAAGTAA

Coding sequence (CDS)

ATGGTCACATGGGTATTGAAGTGTGAAAAGCTTGTTGATGGATTTGTCTTCATGCTATATCGAAGAAGGCATCAAAGCTGCATCAATTGGCTGAGATTGTTCTCAATGGGGAACCAGTCAAGTTTGACATACATGGAAGTAATATATTCCCGTTCCCGGTCTGTTTTAGGTGTTCTGGAAAGTTTAGCAGAGCTTGGTCAGAAGAAAACAGGGCCTTCTTTTGAAGTATCAGTCTATAACTTGCTGCAAAGGACGGATTCATCTCAGGGTCGACGTTGCTGGCTGGACAGAAGTTGCGAATTCTACCTTCAAAGGATGAGCAATGAGCAAATCCCAAGTACAGATGCATCACAGCCCTTCACCCAAGCAAACAAAACCAGATCGGGAAACCCAAAAGGGTTATACCCTCCTCTTGTTGCTATTGAGTTTCCTTTACTTCAAAAGGTAGCTCGAGAGGCCAGGATTTCTTCGTTTACAAAGTAA

Protein sequence

MVTWVLKCEKLVDGFVFMLYRRRHQSCINWLRLFSMGNQSSLTYMEVIYSRSRSVLGVLESLAELGQKKTGPSFEVSVYNLLQRTDSSQGRRCWLDRSCEFYLQRMSNEQIPSTDASQPFTQANKTRSGNPKGLYPPLVAIEFPLLQKVAREARISSFTK

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh03G006870 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh03G006870 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh03G006870 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh03G006870 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G006870.1	CmoCh03G006870.1	mRNA