
CmoCh03G006010 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATGAGGTGGCAAAATTAGTAAGGATTATTTGGAGTCCTCATGGCTATTTTCCTCTTTTCCCCAACCTCATTATATTTTATTGTAATTCACCATTTTTCATACACCTATATAAACCCTCTCTCTCTGCTGCTTCTTTCCATCAACTCGCTCTCTCTCAGTATTTTAGTTTCTTCTAAGCTTAATTCTCTTCTTCGCTTCCATATTGCTTCTTCTTCCCTTTCCCAAATGGCCACCATTGAGGTAATTTCAAGCTTTTATAGCTTTCTCTCATGGCTTTAAGATCTTTTTTCTTGTTTTTCTTTTGGTATTCTAACAATGGCTGTATGAGTGTGATCATGTTGTTACTGATTTAATGATCTGTGGGTATTGGATCACATTCTCATATGAATATGATCATTGAAGGCTGTTTGAACATATTGTGTTTGAATGGCAATCCATAATGAATTGTGCGATCTGGGTGTGGCAGGTTGAATCAGCCCCCGTTGTATTGGCAGAGCCTGAGGCAGCTCCAGTGGTCCAAGCTGAGGAGAAAGTTGCAGAGGAGGCAGTGAGTGAAGCAGCCCCTGCAGAAGAGGCAAAGGAGGAGGAAGCTGCCTCTGAAGCTGTTGAGACAGAGGAACCAGCACCGGTCGCAGCCGAACCCGAGGTCGAAACCAAGGAAGTTGTGGTAGAGGAGGCAGTGGAGGCAGAGCCTGCAGCTGCTGCTGCTTCCGAGCCCGAAGCAGCGGCCGAGGCGGAAGAGAAGAAGGAAGAGACCAAAGAGGAAACAGAAGAGCCAGTGGTAGAGAAAAAAGAAGAAGAAGAAGAACCTCAGGAAGTGAAGGCTGAAGAGACTGTTGAAGAGAGCTCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCTGAGGAAGAGAAGCCAAAGGAAGAGGAATAA AATGAGGTGGCAAAATTAGTAAGGATTATTTGGAGTCCTCATGGCTATTTTCCTCTTTTCCCCAACCTCATTATATTTTATTGTAATTCACCATTTTTCATACACCTATATAAACCCTCTCTCTCTGCTGCTTCTTTCCATCAACTCGCTCTCTCTCAGTATTTTAGTTTCTTCTAAGCTTAATTCTCTTCTTCGCTTCCATATTGCTTCTTCTTCCCTTTCCCAAATGGCCACCATTGAGGTTGAATCAGCCCCCGTTGTATTGGCAGAGCCTGAGGCAGCTCCAGTGGTCCAAGCTGAGGAGAAAGTTGCAGAGGAGGCAGTGAGTGAAGCAGCCCCTGCAGAAGAGGCAAAGGAGGAGGAAGCTGCCTCTGAAGCTGTTGAGACAGAGGAACCAGCACCGGTCGCAGCCGAACCCGAGGTCGAAACCAAGGAAGTTGTGGTAGAGGAGGCAGTGGAGGCAGAGCCTGCAGCTGCTGCTGCTTCCGAGCCCGAAGCAGCGGCCGAGGCGGAAGAGAAGAAGGAAGAGACCAAAGAGGAAACAGAAGAGCCAGTGGTAGAGAAAAAAGAAGAAGAAGAAGAACCTCAGGAAGTGAAGGCTGAAGAGACTGTTGAAGAGAGCTCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCTGAGGAAGAGAAGCCAAAGGAAGAGGAATAA ATGGCTATTTTCCTCTTTTCCCCAACCTCATTATATTTTATTGTAATTCACCATTTTTCATACACCTATATAAACCCTCTCTCTCTGCTGCTTCTTTCCATCAACTCGCTCTCTCTCAGTATTTTAGTTTCTTCTAAGCTTAATTCTCTTCTTCGCTTCCATATTGCTTCTTCTTCCCTTTCCCAAATGGCCACCATTGAGGTTGAATCAGCCCCCGTTGTATTGGCAGAGCCTGAGGCAGCTCCAGTGGTCCAAGCTGAGGAGAAAGTTGCAGAGGAGGCAGTGAGTGAAGCAGCCCCTGCAGAAGAGGCAAAGGAGGAGGAAGCTGCCTCTGAAGCTGTTGAGACAGAGGAACCAGCACCGGTCGCAGCCGAACCCGAGGTCGAAACCAAGGAAGTTGTGGTAGAGGAGGCAGTGGAGGCAGAGCCTGCAGCTGCTGCTGCTTCCGAGCCCGAAGCAGCGGCCGAGGCGGAAGAGAAGAAGGAAGAGACCAAAGAGGAAACAGAAGAGCCAGTGGTAGAGAAAAAAGAAGAAGAAGAAGAACCTCAGGAAGTGAAGGCTGAAGAGACTGTTGAAGAGAGCTCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCTGAGGAAGAGAAGCCAAAGGAAGAGGAATAA MAIFLFSPTSLYFIVIHHFSYTYINPLSLLLLSINSLSLSILVSSKLNSLLRFHIASSSLSQMATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPVAAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEPQEVKAEETVEESSEAAAAAAAAAAPAEEEKPKEEE Homology
BLAST of CmoCh03G006010 vs. ExPASy TrEMBL
Match: A0A6J1GG70 (major latex allergen Hev b 5-like OS=Cucurbita moschata OX=3662 GN=LOC111453630 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 4.6e-54 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of CmoCh03G006010 vs. ExPASy TrEMBL
Match: A0A6J1IVT4 (major latex allergen Hev b 5-like OS=Cucurbita maxima OX=3661 GN=LOC111478851 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 6.2e-43 Identity = 144/161 (89.44%), Postives = 144/161 (89.44%), Query Frame = 0
BLAST of CmoCh03G006010 vs. ExPASy TrEMBL
Match: A0A5D3CMF4 (Fibrous sheath CABYR-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005990 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 7.3e-20 Identity = 102/157 (64.97%), Postives = 110/157 (70.06%), Query Frame = 0
BLAST of CmoCh03G006010 vs. ExPASy TrEMBL
Match: A0A0A0KMX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511710 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19 Identity = 101/157 (64.33%), Postives = 111/157 (70.70%), Query Frame = 0
BLAST of CmoCh03G006010 vs. ExPASy TrEMBL
Match: A0A1S3B0W0 (fibrous sheath CABYR-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103484659 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.2e-19 Identity = 99/155 (63.87%), Postives = 108/155 (69.68%), Query Frame = 0
BLAST of CmoCh03G006010 vs. NCBI nr
Match: XP_022950569.1 (major latex allergen Hev b 5-like [Cucurbita moschata]) HSP 1 Score: 221.1 bits (562), Expect = 9.4e-54 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of CmoCh03G006010 vs. NCBI nr
Match: KAG6603817.1 (hypothetical protein SDJN03_04426, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033998.1 hypothetical protein SDJN02_03724 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 215.3 bits (547), Expect = 5.2e-52 Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0
BLAST of CmoCh03G006010 vs. NCBI nr
Match: XP_023544677.1 (uncharacterized protein LOC111804190 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023544678.1 uncharacterized protein LOC111804190 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 190.3 bits (482), Expect = 1.8e-44 Identity = 146/160 (91.25%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of CmoCh03G006010 vs. NCBI nr
Match: XP_022979119.1 (major latex allergen Hev b 5-like [Cucurbita maxima]) HSP 1 Score: 184.1 bits (466), Expect = 1.3e-42 Identity = 144/161 (89.44%), Postives = 144/161 (89.44%), Query Frame = 0
BLAST of CmoCh03G006010 vs. NCBI nr
Match: XP_038880819.1 (probable serine/threonine-protein kinase kinX [Benincasa hispida]) HSP 1 Score: 122.9 bits (307), Expect = 3.5e-24 Identity = 112/157 (71.34%), Postives = 121/157 (77.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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