CmoCh03G005800 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G005800
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	homeobox protein SHOOT MERISTEMLESS-like
Location	Cmo_Chr03: 5622973 .. 5626364 (-)
RNA-Seq Expression	CmoCh03G005800
Synteny	CmoCh03G005800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCTCACTCCCTCCATCCCCCATCGCTGCCTTGGTTTTCCATCTCTCCGCCCTGCCCTGCCCTGCCCTGCACTGCCCTCTCCTCGATTCCTTCGTTTCCCCCTCTCTCTCTCGTTCTTTTTGGCAGTAATGGCAGTGCCTCATCAGTGCCACTGCAACGACAAAAGAGGACGACGAGAGTTTTCATCGGGAAGGTAAAAAAAAACCCAACAAAAAAAAATCCAAACTTTGCCACTATCCTCTTAACCCATCTCCTTCGCTCTCTCAAAAACTTGAAATTAAACGCTACCCACCGAAGAAGAGGAGGTAAAAACACTAAAGGTGGGGACTTTAATCTGTTTGATTCATTTAAACCAATACCTCCAACGCCAGGCTTTTCCAGTTTCATTGATGAACAACTCGGATCTTTCTTAAAAGAACCCAAAAGCCTGAACTTTTTGAAGCTAAAATCCCGGGAGTCTAAACACAAAAGTGGGTTTTTTTAGGAGAGAGACGCACGGATTTTGTTCGTTGTTGTTGTTGTTGTTATCAATGGATGGTCCAAGTGGGAGTTCTTCAGGAGGAGGTATGATGAATTTTGTTGATCAAAATAGTCATAATGGGTTTGGTTCCATGATGATGATGATGCCTTTGATGTCCACCTCTCATCAACAACAACACCACCAGGGAGATGCATGTAGCTCGTTTCTTCCTCCTCCTCCTCCGCCGCCGCCGCCTAATTACACCAACAATAACACTTCTAATTCAATTTCTTACTTCTTGGATGAAACCAACAACAACATCAACGAGGGTAGTAATGGTAATTCTTCATGTGAATTGAAGGCCAAAATCATGGGTCATCCCCACTACCACCGCTTGCTTGTTGCCTATGTCAATTGCCGGAAGGTAATAATAATAGTAAATGGTATTCTTTTTGGGACCCGGGAGCGTAGGCTGAGATCTGAAGCTTTTTGGCAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTGGAACAAGCGTGTGCATCTGCAGCCACAATGAGTGGTACGTCTTGTATTGGACAAGATCCGGGGCTTGATCAGTTCATGGAGGCTTACTGTGAGATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATTGAGTGCCAATTCAAAGCTCTCTCTATCTCCTCCTCCTCCGATGCTGGTGATTTCTTACTAACAATTACTCCTTTTTTATTTAATCATCTTTTTTTTTTTTTTTTTTCCATTTGCCCAATTTTTGTGCTTTATTTTATTATAATATTTTATTATTTTTGTGCCCTTTCTTTGTGGCTAGGGCATCTATGAACCCTTTGATTTGCATAGTCTCTACTTTAAAGATATATATTGTTCTTAGGGTTTATATCTAAACCTCGTCTGTCAAGATGGCTTCATGACACAGTCCAACCCAAATTACCCCTTTTAATCTAGATCCCAACAAGAACATGAAATCGGGTGTCAAGCTAAAAACTGACGGTATAATGTATAAGTCTACTCTTAACAGATATTGTCTTTTTTGGATTTTTCCTTTTGGACTTGGTTTTAAAATGCGTCTGCTAAGGAGGTTTCCACACTTTATAAGGAATGTTTCGTTCTTCTCTGCAACCGATATGGAATCTTACACGAATGATTTTAGAAACTGAATTAGGGAGAAGACATTTGAGTGTAAGGGTGGTTGAGATCTTCCAATATATGCCATTGGGAAGTTGAGATGAAACTTATGAATTCATCGTTTTTAATACCCCATATCTTCAATACATTTCCATATAGTTCATCTTTTTCTTCCTTCAAATGGGATAGTATTGTTTTGATTATCAAGATGAAACATTTAACCTCTCTTGTTTTGTATAGATTTAAATATCTAAGACATCTGTCTCTTGATGATCGTTGAGTATGATTTCAATAATTTGCATGCAGTAATTCTATTTCTACGTACGATGATGATGATAAACTATTTGTCACATTGATGATAAACTATTTGTCACATTGTAGCGGTCTCATCGAACAATTTATCCTATCATTGGTTTTTGAGTTCGCATGGATGAACATGTATCATTAAGTAGCTTTGGAAATACAGGATCTTTTTTTTTTTTTTTGTCTTCTACTATTTTTTTGTGTGTTAGATTGTCATTCCCTCTGCAAAATAGTTGTCTTTCTAGTTCTAAAAGAAGAGGAGCCCCCCATCCTCTCTCAAACCCCAAGCCTGGGAGACACTGCACAAATCCTTGAAAAGCTGCCAAAAAGAAAGAAAAATGTCTTATTTCAGCCTAATGTTTCAACTCTTGCCCGCCCCTTGTCTTATTGGGTTAGGAACTACGAACCTCTACAACGGTATGATATTGTTCACTTTGAGCATAAACTCTCGTGGCTTTGATTTTAGTTTATAAAAAAGGCCCCATACAAATGGAAATGTATTCCGGACTTATAAATCCATTATGGTCCTCTTAATTTGTGATTGTGGAACTCCCTAACAATCCGCTCACCGATCCATGCAGCCGGAACTATAAATACTTATGAAGTTGTTGTTCTAGAATTAGTATAATGTGTGGATCCATGTTCTGTAATGTTTTGTTGTTGGGTGACACATATTTTTGCACACGCCAATTAGGTTGCGGTGAGGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATGAATAGGCAGTCAATTGACCCCTGGGCGGAAGACCATGAACTGAAAGGTCAACTCCTCCGAAAATACAGCAGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTACCAAAGGAGGCCAGGCAACAGCTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGTATGTTCTTGTTTTGATAACAACATACACTATAGATTATATATATAATATTATAGATTATATAATGGGAATGGAATGTTTTTTGTGACAGGAATCACAGAAGGTAGCTTTAGCTGAATCAACTGGGTTAGATCAAAAGCAAATCAACAACTGGTTCATCAACCAGAGAAAAAGACACTGGAAACCATCTGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCATCATCCACAGTATTACATGGACTCCGTCTTGGGGAATCCTTTCCCATTTGATATCTCTCCCACTCTTCTCTAATTATTAAATTTCCTTATAATATAATGTCGTGTATATGTATATGATGATGATGATGGTGTTGATGGCGATCGCCTGTATGGATGTATGATGGATGTTTCAATTTGTTTGACAGAACATATATTTTATATATATATGTGTGTCACTTTTGCCATCTGTTGGTTATTTGGGTTATCTTGAAAATGTTCGAGTTGAACTGACCTGCG

mRNA sequence

CCCTTCTCACTCCCTCCATCCCCCATCGCTGCCTTGGTTTTCCATCTCTCCGCCCTGCCCTGCCCTGCCCTGCACTGCCCTCTCCTCGATTCCTTCGTTTCCCCCTCTCTCTCTCGTTCTTTTTGGCAGTAATGGCAGTGCCTCATCAGTGCCACTGCAACGACAAAAGAGGACGACGAGAGTTTTCATCGGGAAGGTAAAAAAAAACCCAACAAAAAAAAATCCAAACTTTGCCACTATCCTCTTAACCCATCTCCTTCGCTCTCTCAAAAACTTGAAATTAAACGCTACCCACCGAAGAAGAGGAGGTAAAAACACTAAAGGTGGGGACTTTAATCTGTTTGATTCATTTAAACCAATACCTCCAACGCCAGGCTTTTCCAGTTTCATTGATGAACAACTCGGATCTTTCTTAAAAGAACCCAAAAGCCTGAACTTTTTGAAGCTAAAATCCCGGGAGTCTAAACACAAAAGTGGGTTTTTTTAGGAGAGAGACGCACGGATTTTGTTCGTTGTTGTTGTTGTTGTTATCAATGGATGGTCCAAGTGGGAGTTCTTCAGGAGGAGGTATGATGAATTTTGTTGATCAAAATAGTCATAATGGGTTTGGTTCCATGATGATGATGATGCCTTTGATGTCCACCTCTCATCAACAACAACACCACCAGGGAGATGCATGTAGCTCGTTTCTTCCTCCTCCTCCTCCGCCGCCGCCGCCTAATTACACCAACAATAACACTTCTAATTCAATTTCTTACTTCTTGGATGAAACCAACAACAACATCAACGAGGGTAGTAATGGTAATTCTTCATGTGAATTGAAGGCCAAAATCATGGGTCATCCCCACTACCACCGCTTGCTTGTTGCCTATGTCAATTGCCGGAAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTGGAACAAGCGTGTGCATCTGCAGCCACAATGAGTGGTACGTCTTGTATTGGACAAGATCCGGGGCTTGATCAGTTCATGGAGGCTTACTGTGAGATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATTGAGTGCCAATTCAAAGCTCTCTCTATCTCCTCCTCCTCCGATGCTGGTTGCGGTGAGGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATGAATAGGCAGTCAATTGACCCCTGGGCGGAAGACCATGAACTGAAAGGTCAACTCCTCCGAAAATACAGCAGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTACCAAAGGAGGCCAGGCAACAGCTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGAATCACAGAAGGTAGCTTTAGCTGAATCAACTGGGTTAGATCAAAAGCAAATCAACAACTGGTTCATCAACCAGAGAAAAAGACACTGGAAACCATCTGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCATCATCCACAGTATTACATGGACTCCGTCTTGGGGAATCCTTTCCCATTTGATATCTCTCCCACTCTTCTCTAATTATTAAATTTCCTTATAATATAATGTCGTGTATATGTATATGATGATGATGATGGTGTTGATGGCGATCGCCTGTATGGATGTATGATGGATGTTTCAATTTGTTTGACAGAACATATATTTTATATATATATGTGTGTCACTTTTGCCATCTGTTGGTTATTTGGGTTATCTTGAAAATGTTCGAGTTGAACTGACCTGCG

Coding sequence (CDS)

ATGGATGGTCCAAGTGGGAGTTCTTCAGGAGGAGGTATGATGAATTTTGTTGATCAAAATAGTCATAATGGGTTTGGTTCCATGATGATGATGATGCCTTTGATGTCCACCTCTCATCAACAACAACACCACCAGGGAGATGCATGTAGCTCGTTTCTTCCTCCTCCTCCTCCGCCGCCGCCGCCTAATTACACCAACAATAACACTTCTAATTCAATTTCTTACTTCTTGGATGAAACCAACAACAACATCAACGAGGGTAGTAATGGTAATTCTTCATGTGAATTGAAGGCCAAAATCATGGGTCATCCCCACTACCACCGCTTGCTTGTTGCCTATGTCAATTGCCGGAAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTGGAACAAGCGTGTGCATCTGCAGCCACAATGAGTGGTACGTCTTGTATTGGACAAGATCCGGGGCTTGATCAGTTCATGGAGGCTTACTGTGAGATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATTGAGTGCCAATTCAAAGCTCTCTCTATCTCCTCCTCCTCCGATGCTGGTTGCGGTGAGGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATGAATAGGCAGTCAATTGACCCCTGGGCGGAAGACCATGAACTGAAAGGTCAACTCCTCCGAAAATACAGCAGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTACCAAAGGAGGCCAGGCAACAGCTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGAATCACAGAAGGTAGCTTTAGCTGAATCAACTGGGTTAGATCAAAAGCAAATCAACAACTGGTTCATCAACCAGAGAAAAAGACACTGGAAACCATCTGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCATCATCCACAGTATTACATGGACTCCGTCTTGGGGAATCCTTTCCCATTTGATATCTCTCCCACTCTTCTCTAA

Protein sequence

MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPPPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL

Homology

[Close]

BLAST of CmoCh03G005800 vs. ExPASy Swiss-Prot
Match: Q38874 (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 437.6 bits (1124), Expect = 1.3e-121
Identity = 254/384 (66.15%), Postives = 282/384 (73.44%), Query Frame = 0


Query: 5   SGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTS---------HQQQHHQGDACSS---- 64
           SGS+S    M F   NS      MMMMMP + TS         HQQQ H G A  S    
Sbjct: 3   SGSNSTSCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGYAYQSHHQQ 62

Query: 65  ----FLPPPPPPPPPNYTNNNTSNSIS-------YFLDETNNN------INEGSNGNSSC 124
               FL       PP  T N  ++S S       Y L E ++N      IN  S+ +SS 
Sbjct: 63  SSSLFL---QSLAPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSSSSSSA 122

Query: 125 ELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQAC----ASAATMSGTSCIGQDPG 184
            +KAKIM HPHYHRLL AYVNC+KVGAPPEVVARLE+AC    A+AA+M  T C+G+DPG
Sbjct: 123 SVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPG 182

Query: 185 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISS-SSDAGCGE-AFDR-- 244
           LDQFMEAYCEML KYEQELSKPF++AM+FLQR+ECQFK+LS+SS SS +G GE A DR  
Sbjct: 183 LDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNN 242

Query: 245 NGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQL 304
           NGSSEEEVDMN + +DP AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQL
Sbjct: 243 NGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL 302

Query: 305 LDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHH 350
           LDWWSRHYKWPYPSE QK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA H 
Sbjct: 303 LDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHP 362

[Close]

BLAST of CmoCh03G005800 vs. ExPASy Swiss-Prot
Match: O22299 (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 3.0e-121
Identity = 222/306 (72.55%), Postives = 255/306 (83.33%), Query Frame = 0


Query: 58  PPPPPNYTNNN----TSNSISY--FLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLV 117
           PPPPP+ TNNN    ++N+I +  F+D  NNN  +  N +SS  +K+KIM HPHYHRLL 
Sbjct: 52  PPPPPSLTNNNNAETSNNNILFLPFMDNNNNNNPQEDNNSSSSSIKSKIMAHPHYHRLLT 111

Query: 118 AYVNCRKVGAPPEVVARLEQACASAATM------SGTSCIGQDPGLDQFMEAYCEMLTKY 177
           AY+NC+K+GAPPEVVARLE+ CA++ATM      SG   IG+DP LDQFMEAYCEMLTKY
Sbjct: 112 AYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFMEAYCEMLTKY 171

Query: 178 EQELSKPFRDAMLFLQRIECQFKALSI--SSSSDAGCGEAFDRNGSSEEEVDMNRQSIDP 237
           EQELSKPF++AM+FL RIECQFKAL++  +SS ++  GEA DRNGSS+EEVD+N   IDP
Sbjct: 172 EQELSKPFKEAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNGSSDEEVDVNNSFIDP 231

Query: 238 WAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 297
            AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQL+DWW RH KWPYPSESQ
Sbjct: 232 QAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQ 291

Query: 298 KVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFD 350
           K+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA  HP YYMD+VL N FP D
Sbjct: 292 KLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA--HPHYYMDNVLANHFPMD 351

[Close]

BLAST of CmoCh03G005800 vs. ExPASy Swiss-Prot
Match: P46608 (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 6.3e-119
Identity = 243/385 (63.12%), Postives = 278/385 (72.21%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDA------------ 60
           M+G S SS+G   +    +N+  G    M MMPL+ TSH   HH  +             
Sbjct: 1   MEGGSSSSNGTSYLLAFGENNSGGL-CPMTMMPLV-TSHHAGHHPINPSNNNNVNTNCLF 60

Query: 61  ---CSSFLPPPPPPPPPNYTN-------NNTSNSISYFLDET--------NNNINEGSNG 120
              CS+    P      N+ N       NN +  + Y+  E+        NNN N  S+ 
Sbjct: 61  IPNCSNSTGTPSIMLHNNHNNNKTDDDDNNNNTGLGYYFMESDHHHHHHGNNNNNGSSSS 120

Query: 121 NSSCELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQACASAATM------SGTSC 180
           +SS  +KAKIM HPHYHRLL AYVNC+KVGAPPEVVARLE+ACASAATM      +G+SC
Sbjct: 121 SSSSAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSC 180

Query: 181 IGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAF 240
           IG+DP LDQFMEAYCEMLTKYEQELSKP ++AMLFLQRIECQFK L+I SSSD    E  
Sbjct: 181 IGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTI-SSSDFASNEGG 240

Query: 241 DRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQ 300
           DRNGSSEE+VD++   IDP AED +LKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQ
Sbjct: 241 DRNGSSEEDVDLHNM-IDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQ 300

Query: 301 QLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA 350
           QLL+WW+RHYKWPYPSESQK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD +
Sbjct: 301 QLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPS 360

[Close]

BLAST of CmoCh03G005800 vs. ExPASy Swiss-Prot
Match: Q9M6D9 (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.0e-113
Identity = 242/383 (63.19%), Postives = 267/383 (69.71%), Query Frame = 0


Query: 5   SGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQH-----------HQGDAC---- 64
           SGS+S    M F   NS      MMMMM  + TSHQQ H           H G A     
Sbjct: 3   SGSNSTSCPMAFAGDNSDGPMCPMMMMMMPVITSHQQHHGHDQQHQHQQQHDGYAYQSHH 62

Query: 65  --SSFLPPPPPPPPPNYTNNNTSNSIS-------YFLDETNNNINEGSNGN------SSC 124
             SS L      PP     N   +S S       Y   E N+  NE   G       SS 
Sbjct: 63  QHSSLLFLQSLTPPSQEAKNKVRSSCSPSSGAPAYSFMEINHQ-NELLAGGLQSPVLSSL 122

Query: 125 ELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQAC----ASAATMSGTSCIGQDPG 184
            +KAKIM HPHYHRLL+AYVNC+KVGAPPEV ARLE+ C    A+AA+M  T  +G+DPG
Sbjct: 123 LVKAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTGSLGEDPG 182

Query: 185 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAF---DRN 244
           LDQFMEAYCEML KYEQELSKPF++AM+FLQ +ECQFK+LS+SS S  G GEA    + N
Sbjct: 183 LDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAAIERNNN 242

Query: 245 GSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLL 304
           GSSEEEVDMN + +DP AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLL
Sbjct: 243 GSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL 302

Query: 305 DWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHH 350
           DWWSRHYKWPYPSE QK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA  H 
Sbjct: 303 DWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAT-HP 362

[Close]

BLAST of CmoCh03G005800 vs. ExPASy Swiss-Prot
Match: P46639 (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana OX=3702 GN=KNAT1 PE=1 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.4e-72
Identity = 176/378 (46.56%), Postives = 216/378 (57.14%), Query Frame = 0


Query: 8   SSGGGMMNFVDQNSHNGFGSMMMMMP----LMSTSHQQQHHQGDACSSFLPPP------P 67
           SS     N  D N++N   +     P      + +H  QH      SS LP         
Sbjct: 23  SSSNKNDNTSDTNNNNNNNNSSNYGPGYNNTNNNNHHHQHMLFPHMSSLLPQTTENCFRS 82

Query: 68  PPPPPNYTNN------NTSNSISYF---------LDETNNNINEGSNGNSSCELKAKIMG 127
               PN  NN       +S+ I+++           E NNN N+  N +    +KAKI+ 
Sbjct: 83  DHDQPNNNNNPSVKSEASSSRINHYSMLMRAIHNTQEANNNNND--NVSDVEAMKAKIIA 142

Query: 128 HPHYHRLLVAYVNCRKVGAPPEVVARLEQA-----CASAATMSGTSCIGQDPGLDQFMEA 187
           HPHY  LL AY++C+K+GAPP+VV R+  A          +    S   +DP LDQFMEA
Sbjct: 143 HPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPELDQFMEA 202

Query: 188 YCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEA-FDRNGSSEEEVDM 247
           YC+ML KY +EL++P ++AM F++RIE Q   L  S        +   D  GSS+EE + 
Sbjct: 203 YCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDNMGSSDEEQEN 262

Query: 248 NR------QSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWW 307
           N         IDP AED ELK  LL+KYS YL SLKQE  KK+KKGKLPKEARQ+LL WW
Sbjct: 263 NSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWW 322

Query: 308 SRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAH--HHP 347
             HYKWPYPSES+KVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD     HH 
Sbjct: 323 ELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHA 382

[Close]

BLAST of CmoCh03G005800 vs. ExPASy TrEMBL
Match: A0A6J1GDG8 (homeobox protein SHOOT MERISTEMLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111453189 PE=3 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 1.4e-201
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP 60
           MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP 60

Query: 61  PPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVG 120
           PPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVG
Sbjct: 61  PPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVG 120

Query: 121 APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL 180
           APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL
Sbjct: 121 APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL 180

Query: 181 QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSR 240
           QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSR
Sbjct: 181 QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSR 240

Query: 241 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN 300
           YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN
Sbjct: 241 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN 300

Query: 301 WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 350
           WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 349

[Close]

BLAST of CmoCh03G005800 vs. ExPASy TrEMBL
Match: A0A6J1IPU1 (homeobox protein SHOOT MERISTEMLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111478842 PE=3 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.3e-193
Identity = 341/351 (97.15%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP 60
           MDGPSGSSSGGGMMNFVDQNSHNGF SMMMMMPLMS+SHQQQHHQGDACSSFL  PPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFL--PPPPP 60

Query: 61  PPNYTNNNTSNSISYFLDETNN--NINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK 120
           PPNYTNNNTSNSISYFL ETN+  NINEGSNGNS CELKAKIMGHPHYHRLLVAYVNCRK
Sbjct: 61  PPNYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRK 120

Query: 121 VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML 180
           VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML
Sbjct: 121 VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML 180

Query: 181 FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKY 240
           FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMN QSIDPWAEDHELKGQLLRKY
Sbjct: 181 FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKY 240

Query: 241 SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI 300
           SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI
Sbjct: 241 SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI 300

Query: 301 NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 350
           NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 349

[Close]

BLAST of CmoCh03G005800 vs. ExPASy TrEMBL
Match: A0A6J1BTA7 (homeobox protein SBH1 OS=Momordica charantia OX=3673 GN=LOC111005360 PE=3 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.8e-153
Identity = 295/363 (81.27%), Postives = 314/363 (86.50%), Query Frame = 0


Query: 1   MDGPS-GSSSGGGMMNFVDQNSHNGF-GSMMMMMPLMSTSHQQQHHQGD-ACSSFLPPPP 60
           M+GPS G  S  GMMNF DQN++NG   SMMMMMPLMS+      H GD ACSSFLP PP
Sbjct: 1   MEGPSGGGGSSSGMMNFGDQNNNNGLCSSMMMMMPLMSS------HGGDGACSSFLPLPP 60

Query: 61  PPPPPNY---TNNNTSNSISYFLDE---TNNNINEGSN----GNSSCELKAKIMGHPHYH 120
           PPPP NY    NNNT+N ISYF++     NN+ NEG+N     +SS ++KAKIM HPHYH
Sbjct: 61  PPPPHNYEPSPNNNTTNPISYFMENNNTNNNSNNEGANNAASSSSSSQVKAKIMAHPHYH 120

Query: 121 RLLVAYVNCRKVGAPPEVVARLEQACASAATMSGT-SCIGQDPGLDQFMEAYCEMLTKYE 180
           RLL AYVNCRKVGAPPEVVARLEQACASAAT+SGT SCIG+DP LDQFMEAYCEMLTKYE
Sbjct: 121 RLLAAYVNCRKVGAPPEVVARLEQACASAATISGTSSCIGEDPALDQFMEAYCEMLTKYE 180

Query: 181 QELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAE 240
           QELSKPFRDAMLFLQRI+CQFKALSISSSSDA CGEAFDRNGSSEEEVD+N  SIDP AE
Sbjct: 181 QELSKPFRDAMLFLQRIDCQFKALSISSSSDAACGEAFDRNGSSEEEVDINGHSIDPQAE 240

Query: 241 DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA 300
           D ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQK+A
Sbjct: 241 DRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLA 300

Query: 301 LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP 350
           LA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA  HPQYYMD+VLGNPFP DISP
Sbjct: 301 LAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA--HPQYYMDTVLGNPFPLDISP 355

[Close]

BLAST of CmoCh03G005800 vs. ExPASy TrEMBL
Match: A0A6J1EG52 (homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC111433869 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 1.0e-148
Identity = 291/370 (78.65%), Postives = 307/370 (82.97%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQ-NSHNGF-GSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPP 60
           MDGP GSSS  GMMNF DQ NS+NG   SMMMMMPLMS+ H   HHQGDAC+ F    PP
Sbjct: 1   MDGPGGSSS--GMMNFGDQNNSNNGLCSSMMMMMPLMSSHHHHHHHQGDACNPF----PP 60

Query: 61  PPPPNYTNNN--------TSNSISYFLDE------TNNNINEG--SNGNSSCELKAKIMG 120
            P PNYT NN        +SN I YF+DE      TNNN + G  +  +SSCELKAKIMG
Sbjct: 61  LPSPNYTTNNINNTNTSSSSNPICYFMDEHTTTTTTNNNNDNGCCNANSSSCELKAKIMG 120

Query: 121 HPHYHRLLVAYVNCRKVGAPPEVVARLEQACASAATMSGTS---CIGQDPGLDQFMEAYC 180
           HPHYHRLL AYVNCRKVGAPP+VVARLE ACASA T+SGTS   CIG+DP LDQFMEAYC
Sbjct: 121 HPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTISGTSCTGCIGEDPALDQFMEAYC 180

Query: 181 EMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQ 240
           EMLTKYEQELSKPFRDAMLFL RIECQFKALSI SSSDA CGEAF+RNGSSEEEVD+N  
Sbjct: 181 EMLTKYEQELSKPFRDAMLFLHRIECQFKALSI-SSSDAVCGEAFERNGSSEEEVDINGH 240

Query: 241 SIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYP 300
           SIDP AED ELKGQLLRKYS  LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYP
Sbjct: 241 SIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYP 300

Query: 301 SESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNP 350
           SESQK+ALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD    HPQYYMD+VLGNP
Sbjct: 301 SESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGG--HPQYYMDTVLGNP 360

[Close]

BLAST of CmoCh03G005800 vs. ExPASy TrEMBL
Match: A0A6J1KQV1 (homeobox protein knotted-1-like LET6 OS=Cucurbita maxima OX=3661 GN=LOC111497440 PE=3 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 4.3e-147
Identity = 292/374 (78.07%), Postives = 305/374 (81.55%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQ-NSHNGF-GSMMMMMPLMST-----SHQQQHHQGDACSSFL 60
           MDGP GSSS  GMMNF DQ NS+NG   SMMMMMPLMS+      H   HHQGDAC+ F 
Sbjct: 1   MDGPGGSSS--GMMNFGDQNNSNNGLCSSMMMMMPLMSSHQHHHHHHHHHHQGDACNPF- 60

Query: 61  PPPPPPPPPNYTNNN--------TSNSISYFLDE--TNNNINEGSNG-----NSSCELKA 120
              PP P PNYT NN        +SN I Y +DE  T NN N   NG     +SSCELKA
Sbjct: 61  ---PPLPSPNYTTNNISNTNTSSSSNPICYLMDENTTINNNNNNDNGCGHANSSSCELKA 120

Query: 121 KIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQACASAATMSGTS---CIGQDPGLDQFM 180
           KIMGHPHYHRLL AYVNCRKVGAPPEVVARLE ACASA TMSGTS   CIG+DP LDQFM
Sbjct: 121 KIMGHPHYHRLLAAYVNCRKVGAPPEVVARLEGACASALTMSGTSCTGCIGEDPALDQFM 180

Query: 181 EAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVD 240
           EAYCEMLTKYEQELSKPFRDAMLFL RIECQFKALSI SSSDA CGEAF+RNGSSEEEVD
Sbjct: 181 EAYCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSI-SSSDAVCGEAFERNGSSEEEVD 240

Query: 241 MNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 300
           +N  SIDP AED ELKGQLLRKYS  LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK
Sbjct: 241 INGHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 300

Query: 301 WPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSV 350
           WPYPSESQK+ALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD    HPQYYMD++
Sbjct: 301 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGG--HPQYYMDTM 360

[Close]

BLAST of CmoCh03G005800 vs. NCBI nr
Match: XP_022949951.1 (homeobox protein SHOOT MERISTEMLESS-like [Cucurbita moschata])

HSP 1 Score: 711.8 bits (1836), Expect = 2.8e-201
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP 60
           MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP 60

Query: 61  PPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVG 120
           PPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVG
Sbjct: 61  PPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVG 120

Query: 121 APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL 180
           APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL
Sbjct: 121 APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL 180

Query: 181 QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSR 240
           QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSR
Sbjct: 181 QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSR 240

Query: 241 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN 300
           YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN
Sbjct: 241 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN 300

Query: 301 WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 350
           WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 349

[Close]

BLAST of CmoCh03G005800 vs. NCBI nr
Match: KAG6603798.1 (Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 702.6 bits (1812), Expect = 1.7e-198
Identity = 347/350 (99.14%), Postives = 347/350 (99.14%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQ-QHHQGDACSSFLPPPPPP 60
           MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQ  HHQGDACSSFLPPPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQHHHHQGDACSSFLPPPPPP 60

Query: 61  PPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKV 120
           PPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKV
Sbjct: 61  PPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKV 120

Query: 121 GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF 180
           GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF
Sbjct: 121 GAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLF 180

Query: 181 LQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYS 240
           LQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMN QSIDPWAEDHELKGQLLRKYS
Sbjct: 181 LQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYS 240

Query: 241 RYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQIN 300
           RYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQIN
Sbjct: 241 RYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQIN 300

Query: 301 NWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 350
           NWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 NWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 350

[Close]

BLAST of CmoCh03G005800 vs. NCBI nr
Match: XP_023544876.1 (homeobox protein SHOOT MERISTEMLESS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 691.8 bits (1784), Expect = 3.0e-195
Identity = 344/352 (97.73%), Postives = 345/352 (98.01%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQ-HHQGDACSSFL--PPPP 60
           MDGPSGSSSGGGMMNFVDQNSHN FGSMMMMMPLMSTSHQQQ HHQGDACSSFL  PPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNAFGSMMMMMPLMSTSHQQQHHHQGDACSSFLPPPPPP 60

Query: 61  PPPPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCR 120
           PPPPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCR
Sbjct: 61  PPPPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCR 120

Query: 121 KVGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAM 180
           KVGAPP+VVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYE ELSKPFRDAM
Sbjct: 121 KVGAPPDVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEHELSKPFRDAM 180

Query: 181 LFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRK 240
           LFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVD N QSIDPWAEDHELKGQLLRK
Sbjct: 181 LFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDKNGQSIDPWAEDHELKGQLLRK 240

Query: 241 YSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQ 300
           YSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQ
Sbjct: 241 YSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQ 300

Query: 301 INNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 350
           INNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 INNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 352

[Close]

BLAST of CmoCh03G005800 vs. NCBI nr
Match: XP_022979101.1 (homeobox protein SHOOT MERISTEMLESS-like [Cucurbita maxima])

HSP 1 Score: 684.5 bits (1765), Expect = 4.8e-193
Identity = 341/351 (97.15%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP 60
           MDGPSGSSSGGGMMNFVDQNSHNGF SMMMMMPLMS+SHQQQHHQGDACSSFL  PPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFL--PPPPP 60

Query: 61  PPNYTNNNTSNSISYFLDETNN--NINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK 120
           PPNYTNNNTSNSISYFL ETN+  NINEGSNGNS CELKAKIMGHPHYHRLLVAYVNCRK
Sbjct: 61  PPNYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRK 120

Query: 121 VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML 180
           VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML
Sbjct: 121 VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML 180

Query: 181 FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKY 240
           FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMN QSIDPWAEDHELKGQLLRKY
Sbjct: 181 FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKY 240

Query: 241 SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI 300
           SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI
Sbjct: 241 SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI 300

Query: 301 NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 350
           NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 349

[Close]

BLAST of CmoCh03G005800 vs. NCBI nr
Match: KAG7033969.1 (Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 679.1 bits (1751), Expect = 2.0e-191
Identity = 347/388 (89.43%), Postives = 347/388 (89.43%), Query Frame = 0


Query: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQ--HHQGDACSSFLPPPPP 60
           MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQ  HHQGDACSSFLPPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHHHQGDACSSFLPPPPP 60

Query: 61  PPPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK 120
           PPPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK
Sbjct: 61  PPPPNYTNNNTSNSISYFLDETNNNINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK 120

Query: 121 ------------------------VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQF 180
                                   VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQF
Sbjct: 121 VIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQF 180

Query: 181 MEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGC-------------G 240
           MEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDA C              
Sbjct: 181 MEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDADCHSLCKIVVFLRIDS 240

Query: 241 EAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKE 300
           EAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKE
Sbjct: 241 EAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKE 300

Query: 301 ARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 350
           ARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM
Sbjct: 301 ARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 360

[Close]

BLAST of CmoCh03G005800 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 437.6 bits (1124), Expect = 9.6e-123
Identity = 254/384 (66.15%), Postives = 282/384 (73.44%), Query Frame = 0


Query: 5   SGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTS---------HQQQHHQGDACSS---- 64
           SGS+S    M F   NS      MMMMMP + TS         HQQQ H G A  S    
Sbjct: 3   SGSNSTSCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGYAYQSHHQQ 62

Query: 65  ----FLPPPPPPPPPNYTNNNTSNSIS-------YFLDETNNN------INEGSNGNSSC 124
               FL       PP  T N  ++S S       Y L E ++N      IN  S+ +SS 
Sbjct: 63  SSSLFL---QSLAPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSSSSSSA 122

Query: 125 ELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQAC----ASAATMSGTSCIGQDPG 184
            +KAKIM HPHYHRLL AYVNC+KVGAPPEVVARLE+AC    A+AA+M  T C+G+DPG
Sbjct: 123 SVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPG 182

Query: 185 LDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISS-SSDAGCGE-AFDR-- 244
           LDQFMEAYCEML KYEQELSKPF++AM+FLQR+ECQFK+LS+SS SS +G GE A DR  
Sbjct: 183 LDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNN 242

Query: 245 NGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQL 304
           NGSSEEEVDMN + +DP AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQL
Sbjct: 243 NGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL 302

Query: 305 LDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHH 350
           LDWWSRHYKWPYPSE QK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA H 
Sbjct: 303 LDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHP 362

[Close]

BLAST of CmoCh03G005800 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-73
Identity = 176/378 (46.56%), Postives = 216/378 (57.14%), Query Frame = 0


Query: 8   SSGGGMMNFVDQNSHNGFGSMMMMMP----LMSTSHQQQHHQGDACSSFLPPP------P 67
           SS     N  D N++N   +     P      + +H  QH      SS LP         
Sbjct: 23  SSSNKNDNTSDTNNNNNNNNSSNYGPGYNNTNNNNHHHQHMLFPHMSSLLPQTTENCFRS 82

Query: 68  PPPPPNYTNN------NTSNSISYF---------LDETNNNINEGSNGNSSCELKAKIMG 127
               PN  NN       +S+ I+++           E NNN N+  N +    +KAKI+ 
Sbjct: 83  DHDQPNNNNNPSVKSEASSSRINHYSMLMRAIHNTQEANNNNND--NVSDVEAMKAKIIA 142

Query: 128 HPHYHRLLVAYVNCRKVGAPPEVVARLEQA-----CASAATMSGTSCIGQDPGLDQFMEA 187
           HPHY  LL AY++C+K+GAPP+VV R+  A          +    S   +DP LDQFMEA
Sbjct: 143 HPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPELDQFMEA 202

Query: 188 YCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEA-FDRNGSSEEEVDM 247
           YC+ML KY +EL++P ++AM F++RIE Q   L  S        +   D  GSS+EE + 
Sbjct: 203 YCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDNMGSSDEEQEN 262

Query: 248 NR------QSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWW 307
           N         IDP AED ELK  LL+KYS YL SLKQE  KK+KKGKLPKEARQ+LL WW
Sbjct: 263 NSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWW 322

Query: 308 SRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAH--HHP 347
             HYKWPYPSES+KVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD     HH 
Sbjct: 323 ELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHA 382

[Close]

BLAST of CmoCh03G005800 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 240.4 bits (612), Expect = 2.2e-63
Identity = 126/247 (51.01%), Postives = 163/247 (65.99%), Query Frame = 0


Query: 84  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQACASA----ATM 143
           I    +  S   +KAKI  HP Y RLL AY++C+KVGAPPE+   LE+    +      +
Sbjct: 73  IRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEV 132

Query: 144 SGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAG 203
             +SC G DP LD+FME YC++L KY+ +L++PF +A  FL +IE Q + L     S  G
Sbjct: 133 VPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARG 192

Query: 204 CGEAFDRNGSSEEEVDMNRQSI----DPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKK 263
             E  D   SS+EE+      +        ED +LK +LLRK+   + +LK EF KK+KK
Sbjct: 193 VSE--DGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKK 252

Query: 264 GKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSED 323
           GKLP+EARQ LLDWW+ HYKWPYP+E  K+ALA++TGLDQKQINNWFINQRKRHWKPSE+
Sbjct: 253 GKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSEN 312

[Close]

BLAST of CmoCh03G005800 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 235.3 bits (599), Expect = 7.2e-62
Identity = 126/249 (50.60%), Postives = 163/249 (65.46%), Query Frame = 0


Query: 84  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK--VGAPPEVVARLEQACASA----A 143
           I    +  S   +KAKI  HP Y RLL AY++C+K  VGAPPE+   LE+    +     
Sbjct: 73  IRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQRESDVYKQ 132

Query: 144 TMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSD 203
            +  +SC G DP LD+FME YC++L KY+ +L++PF +A  FL +IE Q + L     S 
Sbjct: 133 EVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESA 192

Query: 204 AGCGEAFDRNGSSEEEVDMNRQSI----DPWAEDHELKGQLLRKYSRYLGSLKQEFMKKR 263
            G  E  D   SS+EE+      +        ED +LK +LLRK+   + +LK EF KK+
Sbjct: 193 RGVSE--DGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKK 252

Query: 264 KKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPS 323
           KKGKLP+EARQ LLDWW+ HYKWPYP+E  K+ALA++TGLDQKQINNWFINQRKRHWKPS
Sbjct: 253 KKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPS 312

[Close]

BLAST of CmoCh03G005800 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 230.7 bits (587), Expect = 1.8e-60
Identity = 121/247 (48.99%), Postives = 161/247 (65.18%), Query Frame = 0


Query: 84  INEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQACAS----AATM 143
           I +  +  S   +K+KI  HP Y RLL  Y++C+KVGAP E+   LE+           +
Sbjct: 57  IRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDV 116

Query: 144 SGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAG 203
           +  SC G DP LD+FME YC++L KY+ +L++PF +A  F+ +IE Q + L    +S   
Sbjct: 117 APLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATA 176

Query: 204 CGEAFDRNGSSEEEV----DMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKK 263
             +  D   SS+EE+    D+        + D +LK QLLRK+  ++ SLK EF KK+KK
Sbjct: 177 LSD--DGAVSSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKK 236

Query: 264 GKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSED 323
           GKLP+EARQ LLDWW+ H KWPYP+E  K++LAE TGLDQKQINNWFINQRKRHWKPSE+
Sbjct: 237 GKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSEN 296

The following BLAST results are available for this feature:

BLAST of CmoCh03G005800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38874	1.3e-121	66.15	Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ...	[more]
O22299	3.0e-121	72.55	Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=...	[more]
P46608	6.3e-119	63.12	Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1	[more]
Q9M6D9	3.0e-113	63.19	Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=...	[more]
P46639	3.4e-72	46.56	Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana OX=3702 GN=KNAT1 PE=1 ...	[more]

BLAST of CmoCh03G005800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDG8	1.4e-201	100.00	homeobox protein SHOOT MERISTEMLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IPU1	2.3e-193	97.15	homeobox protein SHOOT MERISTEMLESS-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1BTA7	1.8e-153	81.27	homeobox protein SBH1 OS=Momordica charantia OX=3673 GN=LOC111005360 PE=3 SV=1	[more]
A0A6J1EG52	1.0e-148	78.65	homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC1114338...	[more]
A0A6J1KQV1	4.3e-147	78.07	homeobox protein knotted-1-like LET6 OS=Cucurbita maxima OX=3661 GN=LOC111497440...	[more]

BLAST of CmoCh03G005800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949951.1	2.8e-201	100.00	homeobox protein SHOOT MERISTEMLESS-like [Cucurbita moschata]	[more]
KAG6603798.1	1.7e-198	99.14	Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023544876.1	3.0e-195	97.73	homeobox protein SHOOT MERISTEMLESS-like [Cucurbita pepo subsp. pepo]	[more]
XP_022979101.1	4.8e-193	97.15	homeobox protein SHOOT MERISTEMLESS-like [Cucurbita maxima]	[more]
KAG7033969.1	2.0e-191	89.43	Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh03G005800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62360.1	9.6e-123	66.15	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	2.4e-73	46.56	KNOTTED-like from Arabidopsis thaliana	[more]
AT1G23380.1	2.2e-63	51.01	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	7.2e-62	50.60	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	1.8e-60	48.99	KNOTTED-like from Arabidopsis thaliana 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 94..138 e-value: 1.9E-17 score: 74.0
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 96..134 e-value: 1.3E-19 score: 69.7
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 141..192 e-value: 2.1E-24 score: 97.0
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 145..190 e-value: 1.9E-20 score: 72.1
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 251..316 e-value: 4.4E-13 score: 59.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 249..312 score: 12.989054
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 261..313 e-value: 1.93649E-12 score: 59.5645
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 229..250 e-value: 2.0E-7 score: 40.7
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 229..250 e-value: 4.4E-8 score: 33.0
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 229..249 score: 10.73736
None	No IPR available	GENE3D	1.10.10.60		coord: 254..316 e-value: 4.4E-27 score: 95.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..68
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 3..338
None	No IPR available	PANTHER	PTHR11850:SF297	SUBFAMILY NOT NAMED	coord: 3..338
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 269..308 e-value: 2.9E-17 score: 62.3
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 287..310
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 251..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G005800.1	CmoCh03G005800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048440	carpel development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0009934	regulation of meristem structural organization
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005768	endosome
cellular_component	GO:0015630	microtubule cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding