
CmoCh03G004790 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTTCAACAGCCACTACATCGACGGCTTTCCCCCGGCCGCTGATTTCGGTGGAACACATGGCGGCGACTCTATCGGCTTCACCGACTTACAGTTCTGCGGCACCACAAAGGAAATCCAGCCAATCGCCTCGTGTTTTCTATAATTCTTCTCATCGAAACCTTCTCTTTAATTCCAGTTTCTCGCACTGCAACAATACTGTTAAACTCTCACTTAAGCGAGCTGGCATCGTCGTGTCGGCAGTATCTGATTCTCCCGGTAAGTCAAATCGCTCTGTGATTTACGGTTTTTCCCTTGTTATTGCGGGCTGTGGTTGGTGAAATGTGGTTTACAGGAATTGGATCGTATGTGGAGTCTGGGAACATTGCGGATTTACTGGATTCGGTTAAGGTGTTTGACTTGAACGGAAATGGAATTCCGATTTCCGATCTCTGGAAAGACAGGAAAGCCGTGGTCGCATTTGCGCGTCATTTTGGGTACTTGTTTGAATTTTATCTAATTGACAACGGGTTTTCAATTCGTATTCTTCGCCTTGTAAGTAAATATGCGTTGCCGCAGGTGTGTCTTTTGCCGAAAACGTGCTGATTATCTTGCTTCTAAGAAGGTAACTAATATCTTGGGTCCAATAGCGGATTTATGGTAAAGAACCTGTGGAATCCATAAAAGAATTGCTTAGATGGATAATGTTTGCTTGCCAATATGAGCATAGCTAGATGTTTAGCTTGCTCATATTAGTATAATTTTACCTTGTTCCATTTATACTGCTAATTCATGGCGATATTAGGACTACTATCTCACCATTAATTTGGATATATGCATATATATTAATGTTTTCCCCAAGGGGAATCAATCGATTGGTTTCCAACTATATTGTCAATATTTCAAAACTTCACATAGGGGATGTCCCACATCGATTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTATACGTGTTTTAAAACTTTGTGGGAAAGCCCCAAAGAGAAAGTCTAAAGAGGACAATATCTTCTTGCGGTGAGCTTGGACTATTACAAATGGTATCAAAGCCAGACATCAGGGCGATGTATCAGTGAAGACATTGAGCCCTGAAGGAAGTGGACACAGGGTGGTGTACCAGCGAGGACGCTGAGGCCCAAAGGGGGTGGATTGTGAAATCCCAGGAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAACTTACACGTTTTAAAACCTTGAGGGAAAGTCCAAAAGGGAAAGCCAAAAGAGGACAATATCTGCTAGTAGTTGGTAATTATCGGTAATTATCTAAATGGCTTTCCTACCGCAAATTAAGAAACTTCTCAAGAATTAAGCCGTACAATTCATGATATGGTAGCAGGACTTATTGGACGCATCCGGTGTGGCGCTTGTGCTGATTGGACCTGGTAGCATTGATCAGGTATGAAATTAATCCTCAATGGAGCTCTAGCAAAATGCTACATTTGAGGGGTTTATTAAGCATGTGTTTTTGGATCATGGCACACGTTATTTGTTAAGCATTCCATTATTGCCTTTGAGTTAGACTGTATGGTTACGGACCACGATTAGATTATCACTGCGTCATTATTTCTCACACCAAAATCTATCTTTCAGTTCATTGATCCTTATTTATTGTTAGCAATTTGATGCAGGCAAAAGCATTCAGTGAGCAAACAAAATTTCAGGGAGGTAAGTTTCTGCCACCATGGACGAATTTTTTCACTGATTTTTTGTGGCTTATTTATGTGTACAACATATAATAGATATCGATCAGGTGTTGATGAATAAATTTGCAGGATGAGTATAAGTTATCTAGTTTGGCTACTGCTGGTTAAATATTTTACATGCAATGAATATTCCTTTGAATCATATGTTGATCTGAGAGAAGTTTTACTGTTGTCCCTTTACCATCTTATAATATTTCCGCTGAGGACCTGAAAATGGTTAAAAAGAGTAGTTCTTAAGAACCAAACTTAATCTGGAGAGGTTCTGGCTGTAAAAATTGGATTGTTGACTTGAACTGATGGAAGCATACTCTCTGTTTCAGAAGTTTATGCTGATCCTGCACATTCATCATATGAGGCTCTAAATTTTGTGTCTGGGTTTACAACCACATTTACTCCCAAAGTATGTTAGGAGTTCAGTATCATAGCAATGTTATAACCAGCAATATCAGCTTGTAGGTGCTTACTATGGCTGCTTGTCTGAATTTATAGGCGGGTCTCAAGATTATTGAGCTGTACATGGAAGGCTATCGGCAGGATTGGAATCTCTCTTTTCAAAAGGACACTGTGTCTAGAGGGGGATGGTAACTAAAAACCTCAATTATTCTCTCTCTCTCTAACATTTTGGTTTCAGATTGCAAAGCATGGATGAGTGTTCTGATCTAATTTCCTGAGTTGACATGAACAAGCAGCAAGATCCACTGATCTTGATATATACTGCCCATTATCAGTTATCACATAACTAACTTACATCTGAAATTCATTGGATAAAATGGCTCAGGTTGAATACATCACTGATTCACTTTAGTTAGTCTTCTCATTCCATTGGAAACTCATCATGGCATGACTAAGAAATTTTGTTCATTATCCTGAGGACTGGGCTATTGGTTTATAAACGACCAATTTTAGATTCATTACGTGAGATCCTACGTTGATTGGAGAGGGGAAAGAGTGCCAGTGAGGACGCTGGGCCTCGAAGGGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGAGGAATGAAACATTTTTTTGTAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAAATATTGAGGTGAAGCCCGAAAGGGAAAGTCCAAAAGGACAATATCTGTTGGCGGTTGGGGAGGGGAACGAGTGCCGGCAAGGACGCTGGGCTCCAAAGAGGAGTGAATTGTGAGATCCCACATCAGTTAGAGAGAAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTTAACAGACGTGTTTCTAAAACCTTGAGGAGATGCCTGAAAGGTAAAGTCCAAAGAGGACAATATCTGCAAGCGGTTGGAGAGGGGAACGAGTGCCAGCAAAGACGGGCTCCGAAGAGGAGTGGATTATGAGATCCCACATCAGTTGGAGAGAAGAACGAAGCATTCTTTATAAGGGTGTGAAAACCTCTCCTTAACAGACGTGTTTTTAAAACCTTTTGAGAAAACCCAAAAGGAAAAGTTCAAAGAGGACAATATCTGCTAACGATTGGCTTGGACGGTTACACCTTCATTTCTTTTTCAATCTCTCTCAAATGTGCTTGACAAGAAAGCATATTCGTGCCATTTTTCAGGCAGCAAGGCGGCATCATAGTTGCAGGTCCCGGTAAAAATAACATCTCTTACATTCACAAGGTATGTCACTTGTCCATACATGTTCTTGTTTGATATCTCTTTTACATTCACAAGGCATGTCCATTGTCCAGATCAATAATTCTCGATGGTTTTCTTTTCCTGGTAAAACAACGTCTACAAATTTTTCTGTAAAGCTACAAATTGTCAAACTTTTTATCATCTTTTAATTTTTTTGAACCTTAGGATAAAGAAGCTGGGGATGATCCAGATATCCAAGAAATTCTCAAGGCTTGTTGCTCATGAAGCCGAGAGGGATTCTCACACTGCTGATCCATTGCCATCTAAGGCTGGGTTGCAATAAGGTAGCGATTATGGAACAAAAACGCCCTGAAATTATGTAGCCCACTTGAAAAACAACATTGATACGAAGGATAGTAAAGAGTATAGTTTTTGTTTAGGGAACAGTTAATTTTTTACTCTGAAAAGTTGGGACAGTATGGATTATCTCCCTTTTGTAGATTTGGATGATAAAGGTATAGAATCAGGTGAATGAAATTCATTTTTGTGTGTGTAATAGGTCAAGCAGATTAACGTGAGCCTCACGATTTTAAAACGCGTCTGTTGTGAGATCCCATCACATTGGTTAGATGAGAGAACCCACGTGGCGTTCCAACCCAGTTCCAACAATGCACTTTTCGGACCAAGAAAACGGGACTGCTTGACGTTGCATATTAGACCTCATTAAAGCACGATTCACATCATTATGTTCGATAAAAGGAATGAGGGAAGCTCCAATAGAAAAATATTGGAAGGGAGAAATACTTCGAAGATGAACTTGTTCCCATTCAATAGTTAAGAATTCTTGACGGTATCGAGCTGGAACAATCTGTTCTTCTTGAATACCTGGATTCAGTGCCAAAGAATTTCCTGTCGATACCATATAGTATTCTATAGTATTCATCTCGACTTGGTGATAAATAAAGCATCCGCAC AAATTTCAACAGCCACTACATCGACGGCTTTCCCCCGGCCGCTGATTTCGGTGGAACACATGGCGGCGACTCTATCGGCTTCACCGACTTACAGTTCTGCGGCACCACAAAGGAAATCCAGCCAATCGCCTCGTGTTTTCTATAATTCTTCTCATCGAAACCTTCTCTTTAATTCCAGTTTCTCGCACTGCAACAATACTGTTAAACTCTCACTTAAGCGAGCTGGCATCGTCGTGTCGGCAGTATCTGATTCTCCCGGAATTGGATCGTATGTGGAGTCTGGGAACATTGCGGATTTACTGGATTCGGTTAAGGTGTTTGACTTGAACGGAAATGGAATTCCGATTTCCGATCTCTGGAAAGACAGGAAAGCCGTGGTCGCATTTGCGCGTCATTTTGGGTGTGTCTTTTGCCGAAAACGTGCTGATTATCTTGCTTCTAAGAAGGACTTATTGGACGCATCCGGTGTGGCGCTTGTGCTGATTGGACCTGGTAGCATTGATCAGGCAAAAGCATTCAGTGAGCAAACAAAATTTCAGGGAGAAGTTTATGCTGATCCTGCACATTCATCATATGAGGCTCTAAATTTTGTGTCTGGGTTTACAACCACATTTACTCCCAAAGCGGGTCTCAAGATTATTGAGCTGTACATGGAAGGCTATCGGCAGGATTGGAATCTCTCTTTTCAAAAGGACACTGTGTCTAGAGGGGGATGGCAGCAAGGCGGCATCATAGTTGCAGGTCCCGGTAAAAATAACATCTCTTACATTCACAAGGATAAAGAAGCTGGGGATGATCCAGATATCCAAGAAATTCTCAAGGCTTGTTGCTCATGAAGCCGAGAGGGATTCTCACACTGCTGATCCATTGCCATCTAAGGCTGGGTTGCAATAAGGTCAAGCAGATTAACGTGAGCCTCACGATTTTAAAACGCGTCTGTTGTGAGATCCCATCACATTGGTTAGATGAGAGAACCCACGTGGCGTTCCAACCCAGTTCCAACAATGCACTTTTCGGACCAAGAAAACGGGACTGCTTGACGTTGCATATTAGACCTCATTAAAGCACGATTCACATCATTATGTTCGATAAAAGGAATGAGGGAAGCTCCAATAGAAAAATATTGGAAGGGAGAAATACTTCGAAGATGAACTTGTTCCCATTCAATAGTTAAGAATTCTTGACGGTATCGAGCTGGAACAATCTGTTCTTCTTGAATACCTGGATTCAGTGCCAAAGAATTTCCTGTCGATACCATATAGTATTCTATAGTATTCATCTCGACTTGGTGATAAATAAAGCATCCGCAC ATGGCGGCGACTCTATCGGCTTCACCGACTTACAGTTCTGCGGCACCACAAAGGAAATCCAGCCAATCGCCTCGTGTTTTCTATAATTCTTCTCATCGAAACCTTCTCTTTAATTCCAGTTTCTCGCACTGCAACAATACTGTTAAACTCTCACTTAAGCGAGCTGGCATCGTCGTGTCGGCAGTATCTGATTCTCCCGGAATTGGATCGTATGTGGAGTCTGGGAACATTGCGGATTTACTGGATTCGGTTAAGGTGTTTGACTTGAACGGAAATGGAATTCCGATTTCCGATCTCTGGAAAGACAGGAAAGCCGTGGTCGCATTTGCGCGTCATTTTGGGTGTGTCTTTTGCCGAAAACGTGCTGATTATCTTGCTTCTAAGAAGGACTTATTGGACGCATCCGGTGTGGCGCTTGTGCTGATTGGACCTGGTAGCATTGATCAGGCAAAAGCATTCAGTGAGCAAACAAAATTTCAGGGAGAAGTTTATGCTGATCCTGCACATTCATCATATGAGGCTCTAAATTTTGTGTCTGGGTTTACAACCACATTTACTCCCAAAGCGGGTCTCAAGATTATTGAGCTGTACATGGAAGGCTATCGGCAGGATTGGAATCTCTCTTTTCAAAAGGACACTGTGTCTAGAGGGGGATGGCAGCAAGGCGGCATCATAGTTGCAGGTCCCGGTAAAAATAACATCTCTTACATTCACAAGGATAAAGAAGCTGGGGATGATCCAGATATCCAAGAAATTCTCAAGGCTTGTTGCTCATGA MAATLSASPTYSSAAPQRKSSQSPRVFYNSSHRNLLFNSSFSHCNNTVKLSLKRAGIVVSAVSDSPGIGSYVESGNIADLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCRKRADYLASKKDLLDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALNFVSGFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVSRGGWQQGGIIVAGPGKNNISYIHKDKEAGDDPDIQEILKACCS Homology
BLAST of CmoCh03G004790 vs. ExPASy Swiss-Prot
Match: Q9ZUU2 (Thioredoxin-like protein AAED1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g37240 PE=1 SV=2) HSP 1 Score: 318.9 bits (816), Expect = 5.2e-86 Identity = 169/261 (64.75%), Postives = 193/261 (73.95%), Query Frame = 0
BLAST of CmoCh03G004790 vs. ExPASy Swiss-Prot
Match: Q7RTV5 (Peroxiredoxin-like 2C OS=Homo sapiens OX=9606 GN=PRXL2C PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.7e-17 Identity = 54/185 (29.19%), Postives = 85/185 (45.95%), Query Frame = 0
BLAST of CmoCh03G004790 vs. ExPASy Swiss-Prot
Match: Q9D1A0 (Peroxiredoxin-like 2C OS=Mus musculus OX=10090 GN=Prxl2c PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.7e-17 Identity = 57/194 (29.38%), Postives = 91/194 (46.91%), Query Frame = 0
BLAST of CmoCh03G004790 vs. ExPASy Swiss-Prot
Match: Q148E0 (Peroxiredoxin-like 2C OS=Bos taurus OX=9913 GN=PRXL2C PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16 Identity = 53/185 (28.65%), Postives = 85/185 (45.95%), Query Frame = 0
BLAST of CmoCh03G004790 vs. ExPASy Swiss-Prot
Match: B5X9L9 (Prostamide/prostaglandin F synthase OS=Salmo salar OX=8030 GN=prxl2b PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.4e-13 Identity = 50/168 (29.76%), Postives = 77/168 (45.83%), Query Frame = 0
BLAST of CmoCh03G004790 vs. ExPASy TrEMBL
Match: A0A6J1GH74 (thioredoxin-like protein AAED1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453866 PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 4.8e-143 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of CmoCh03G004790 vs. ExPASy TrEMBL
Match: A0A6J1GG77 (thioredoxin-like protein AAED1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453866 PE=4 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.2e-141 Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of CmoCh03G004790 vs. ExPASy TrEMBL
Match: A0A6J1IR48 (thioredoxin-like protein AAED1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477698 PE=4 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 2.9e-140 Identity = 253/258 (98.06%), Postives = 255/258 (98.84%), Query Frame = 0
BLAST of CmoCh03G004790 vs. ExPASy TrEMBL
Match: A0A6J1II72 (thioredoxin-like protein AAED1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477698 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 7.1e-139 Identity = 253/259 (97.68%), Postives = 255/259 (98.46%), Query Frame = 0
BLAST of CmoCh03G004790 vs. ExPASy TrEMBL
Match: A0A0A0L0Q9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293020 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-129 Identity = 236/258 (91.47%), Postives = 244/258 (94.57%), Query Frame = 0
BLAST of CmoCh03G004790 vs. NCBI nr
Match: XP_022950914.1 (thioredoxin-like protein AAED1, chloroplastic isoform X2 [Cucurbita moschata]) HSP 1 Score: 516.9 bits (1330), Expect = 9.9e-143 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of CmoCh03G004790 vs. NCBI nr
Match: XP_023543103.1 (thioredoxin-like protein AAED1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 515.8 bits (1327), Expect = 2.2e-142 Identity = 257/258 (99.61%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of CmoCh03G004790 vs. NCBI nr
Match: KAG6603698.1 (Thioredoxin-like protein AAED1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 513.5 bits (1321), Expect = 1.1e-141 Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of CmoCh03G004790 vs. NCBI nr
Match: XP_022950913.1 (thioredoxin-like protein AAED1, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 512.3 bits (1318), Expect = 2.4e-141 Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of CmoCh03G004790 vs. NCBI nr
Match: XP_023543102.1 (thioredoxin-like protein AAED1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 511.1 bits (1315), Expect = 5.4e-141 Identity = 257/259 (99.23%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of CmoCh03G004790 vs. TAIR 10
Match: AT2G37240.1 (Thioredoxin superfamily protein ) HSP 1 Score: 318.9 bits (816), Expect = 3.7e-87 Identity = 169/261 (64.75%), Postives = 193/261 (73.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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