CmoCh03G004600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G004600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Plant protein 1589 of unknown function
Location	Cmo_Chr03: 5105371 .. 5106328 (+)
RNA-Seq Expression	CmoCh03G004600
Synteny	CmoCh03G004600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATTTCTTTTCTTTTTCTTTTATTTTATTTTATATATCTCTTTAAATTTCGTTGATTTATGTGATGAACGGACGGATGATGTGCGGGCGTATGATTATTGTGGTGTAGGTGCATCACCTGATCGAACAGTGTATAATTTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTCTCCAAACATGCCAATATCAAACCGGTCATCACTTCCACCGGTTCGTTTTCTCTCACGTGATGTGCACGGACTTCGACTCCTTTTTTTATTTATTTATTTTTTTAATTTTGTAAAATGTGTGCAGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTACGACGAGGGCTGCTGATGGGAATTCGTCCGACACGTCGGATTTCAACTTGCTGGATTCGGGGAATACGACGTCGGGTAGGTAGATGGGTAGACAAGCGGTGGTGATGGTGGATGGAAATTAATTAAAAAATATGAAATAAGATAAAACAAGAACATGCCTTTGTACGACGCCGTTTTTAAGGATCGTAGGTGAATGGAACAGCGGCGTTGGGTAAGGGTCGTCGATGGGATAATTTGAGGGGAGTGAAGATATTTTAGGATACCTTGCTGACACGTGGGGAAACGTGGCTACACGTGGCAGCATGTTGCAATTTTCTTTTTTTAATGTATTGCTATCGTTTGCTGATTGGACCTTGTCGTAGGTGTAGTAATTTAAATGAAATTTCCTTTTTTAGTTTTATTTTTATTTTCTTTGTTTTCCTTCAAGTGAAATTAAGACAGTCCGAGCCAATCGGTAATTGCCACCTGTATTTTTCTTTTTATCTAAAGAAAAAGGCACGTGCTTGATGCCAAATGTAATGGTAAGTGGAACGTCAAAAATGTTTTTATTTTGCCACGTGGCCTAAATTCCAGCTCGGATAATGACG

mRNA sequence

ATGGTATTTCTTTTCTTTTTCTTTTATTTTATTTTATATATCTCTTTAAATTTCGTTGATTTATGTGATGAACGGACGGATGATGTGCGGGCGTATGATTATTGTGGTGTGCATCACCTGATCGAACAGTGTATAATTTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTCTCCAAACATGCCAATATCAAACCGGTCATCACTTCCACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTACGACGAGGGCTGCTGATGGGAATTCGTCCGACACGTCGGATTTCAACTTGCTGGATTCGGGGAATACGACGTCGGGTAGGTAGATGGGTAGACAAGCGGTGGTGATGGTGGATGGAAATTAATTAAAAAATATGAAATAAGATAAAACAAGAACATGCCTTTGTACGACGCCGTTTTTAAGGATCGTAGGTGAATGGAACAGCGGCGTTGGGTAAGGGTCGTCGATGGGATAATTTGAGGGGAGTGAAGATATTTTAGGATACCTTGCTGACACGTGGGGAAACGTGGCTACACGTGGCAGCATGTTGCAATTTTCTTTTTTTAATGTATTGCTATCGTTTGCTGATTGGACCTTGTCGTAGGTGTAGTAATTTAAATGAAATTTCCTTTTTTAGTTTTATTTTTATTTTCTTTGTTTTCCTTCAAGTGAAATTAAGACAGTCCGAGCCAATCGGTAATTGCCACCTGTATTTTTCTTTTTATCTAAAGAAAAAGGCACGTGCTTGATGCCAAATGTAATGGTAAGTGGAACGTCAAAAATGTTTTTATTTTGCCACGTGGCCTAAATTCCAGCTCGGATAATGACG

Coding sequence (CDS)

ATGGTATTTCTTTTCTTTTTCTTTTATTTTATTTTATATATCTCTTTAAATTTCGTTGATTTATGTGATGAACGGACGGATGATGTGCGGGCGTATGATTATTGTGGTGTGCATCACCTGATCGAACAGTGTATAATTTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTCTCCAAACATGCCAATATCAAACCGGTCATCACTTCCACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTACGACGAGGGCTGCTGATGGGAATTCGTCCGACACGTCGGATTTCAACTTGCTGGATTCGGGGAATACGACGTCGGGTAGGTAG

Protein sequence

MVFLFFFFYFILYISLNFVDLCDERTDDVRAYDYCGVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTSGR

Homology

[Close]

BLAST of CmoCh03G004600 vs. ExPASy TrEMBL
Match: A0A6J1GEA1 (uncharacterized protein LOC111453395 OS=Cucurbita moschata OX=3662 GN=LOC111453395 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-39
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 37  VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTT 96
           VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTT
Sbjct: 2   VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTT 61

Query: 97  RAADGNSSDTSDFNLLDSGNTTSGR 122
           RAADGNSSDTSDFNLLDSGNTTSGR
Sbjct: 62  RAADGNSSDTSDFNLLDSGNTTSGR 86

[Close]

BLAST of CmoCh03G004600 vs. ExPASy TrEMBL
Match: A0A6J1IHY2 (uncharacterized protein LOC111477620 OS=Cucurbita maxima OX=3661 GN=LOC111477620 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.6e-38
Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 27  DDVRAYDYCGVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 86
           DD  A     VHHLIEQCI+FNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA
Sbjct: 3   DDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 62

Query: 87  YKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTSGR 122
           YKKKRRDVTTRAADG SSDTSDFNLLDSG+TTSGR
Sbjct: 63  YKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR 97

[Close]

BLAST of CmoCh03G004600 vs. ExPASy TrEMBL
Match: A0A1S3BI57 (uncharacterized protein LOC103489916 OS=Cucumis melo OX=3656 GN=LOC103489916 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.6e-30
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 37  VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTT 96
           VHHLIE+CIIFNM KEEC+EALSKHANI+PVITSTVWNELEKENKEFFEAYKKKRRDVTT
Sbjct: 2   VHHLIEKCIIFNMTKEECLEALSKHANIEPVITSTVWNELEKENKEFFEAYKKKRRDVTT 61

Query: 97  RAADGNSSDTSDFNLLDSGNTTS 120
           +  +GNSSDT+DFNLL S +TTS
Sbjct: 62  K--EGNSSDTTDFNLLGSRDTTS 82

[Close]

BLAST of CmoCh03G004600 vs. ExPASy TrEMBL
Match: A0A0A0KZG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293290 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.7e-29
Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 27  DDVRAYDYCGVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 86
           DD  A     VHHLIE+CIIFNM KEEC+EALSKHANI+PVITSTVWNELEKENKEFFEA
Sbjct: 3   DDPSASYIHMVHHLIEKCIIFNMTKEECLEALSKHANIEPVITSTVWNELEKENKEFFEA 62

Query: 87  YKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTS 120
           YKKKRRDVTT+   G+SS+T+DFNLL S +TTS
Sbjct: 63  YKKKRRDVTTK--KGSSSETTDFNLLGSRDTTS 93

[Close]

BLAST of CmoCh03G004600 vs. ExPASy TrEMBL
Match: A0A6J1IAZ7 (uncharacterized protein LOC111471258 OS=Cucurbita maxima OX=3661 GN=LOC111471258 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.3e-29
Identity = 72/94 (76.60%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 27  DDVRAYDYCGVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 86
           DD  A     VHHLIE CI+FNM+KEECMEALSKHANI+PVITSTVWNELEKENKEFF+A
Sbjct: 3   DDPSASYIHMVHHLIEICILFNMSKEECMEALSKHANIEPVITSTVWNELEKENKEFFQA 62

Query: 87  YKKKRRDVTTRAADGN-SSDTSDFNLLDSGNTTS 120
           Y+KKRRDVTTR  +GN SSDT  FNLL  G+TTS
Sbjct: 63  YEKKRRDVTTRKLEGNSSSDTLGFNLLGLGDTTS 96

[Close]

BLAST of CmoCh03G004600 vs. NCBI nr
Match: XP_023544368.1 (uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo] >KAG7033856.1 hypothetical protein SDJN02_03581 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.6 bits (436), Expect = 2.1e-39
Identity = 88/95 (92.63%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 27  DDVRAYDYCGVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 86
           DD  A     VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA
Sbjct: 3   DDPSASYIHMVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 62

Query: 87  YKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTSGR 122
           YKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTSGR
Sbjct: 63  YKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTSGR 97

[Close]

BLAST of CmoCh03G004600 vs. NCBI nr
Match: XP_022950247.1 (uncharacterized protein LOC111453395 [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-39
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 37  VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTT 96
           VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTT
Sbjct: 2   VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTT 61

Query: 97  RAADGNSSDTSDFNLLDSGNTTSGR 122
           RAADGNSSDTSDFNLLDSGNTTSGR
Sbjct: 62  RAADGNSSDTSDFNLLDSGNTTSGR 86

[Close]

BLAST of CmoCh03G004600 vs. NCBI nr
Match: KAG6603679.1 (hypothetical protein SDJN03_04288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.4 bits (433), Expect = 4.8e-39
Identity = 87/95 (91.58%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 27  DDVRAYDYCGVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 86
           DD  A     VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA
Sbjct: 3   DDPSASYIHMVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 62

Query: 87  YKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTSGR 122
           YKKKRRDVTTRAADGNS+DTSDFNLLDSGNTTSGR
Sbjct: 63  YKKKRRDVTTRAADGNSTDTSDFNLLDSGNTTSGR 97

[Close]

BLAST of CmoCh03G004600 vs. NCBI nr
Match: XP_022977252.1 (uncharacterized protein LOC111477620 [Cucurbita maxima])

HSP 1 Score: 167.9 bits (424), Expect = 5.3e-38
Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 27  DDVRAYDYCGVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 86
           DD  A     VHHLIEQCI+FNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA
Sbjct: 3   DDPSASYIHMVHHLIEQCIVFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 62

Query: 87  YKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTSGR 122
           YKKKRRDVTTRAADG SSDTSDFNLLDSG+TTSGR
Sbjct: 63  YKKKRRDVTTRAADGTSSDTSDFNLLDSGDTTSGR 97

[Close]

BLAST of CmoCh03G004600 vs. NCBI nr
Match: XP_038883060.1 (uncharacterized protein LOC120074114 [Benincasa hispida])

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32
Identity = 76/93 (81.72%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 27  DDVRAYDYCGVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 86
           DD  A     VHHLIE+CIIFNM KEECMEALSKHANIKPVITSTVWNELEKENKEFFEA
Sbjct: 3   DDPSASYIHMVHHLIEKCIIFNMTKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 62

Query: 87  YKKKRRDVTTRAADGNSSDTSDFNLLDSGNTTS 120
           YKKKRRDVT + ++GNSSDTSDFNLL S +TTS
Sbjct: 63  YKKKRRDVTVKVSEGNSSDTSDFNLLGSRDTTS 95

[Close]

BLAST of CmoCh03G004600 vs. TAIR 10
Match: AT5G02580.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 104.4 bits (259), Expect = 6.7e-23
Identity = 45/60 (75.00%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 37 VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTT 96
          VHHLIE+CI+FNM KEECM+AL KHANIKP+ITSTVW EL KENKEFFEAY+++R ++ T
Sbjct: 15 VHHLIEECIVFNMGKEECMDALFKHANIKPIITSTVWKELAKENKEFFEAYERRREEIPT 74

[Close]

BLAST of CmoCh03G004600 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 94.0 bits (232), Expect = 9.0e-20
Identity = 41/55 (74.55%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 37 VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKR 92
          V H+IE+C+IF+M+KEEC+EALSKHANI PVITSTVW ELEKENKEFF+AY++++
Sbjct: 13 VQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFFKAYEERQ 67

[Close]

BLAST of CmoCh03G004600 vs. TAIR 10
Match: AT3G28990.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 87.4 bits (215), Expect = 8.4e-18
Identity = 38/54 (70.37%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 37 VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKK 91
          V H+IE C+ FNM+KEECMEALS++ANI P+ITSTVW EL KENK+FFE Y++K
Sbjct: 13 VQHMIETCLTFNMSKEECMEALSENANINPIITSTVWKELVKENKDFFETYEQK 66

[Close]

BLAST of CmoCh03G004600 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 27/51 (52.94%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 37 VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAY 88
          V H+IE+CI+  M ++EC++AL  HA+I P++T TVW  L++ENK+FFE Y
Sbjct: 27 VQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDFFETY 77

[Close]

BLAST of CmoCh03G004600 vs. TAIR 10
Match: AT1G10657.3 (Plant protein 1589 of unknown function )

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 27/51 (52.94%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 37 VHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAY 88
          V H+IE+CI+  M ++EC++AL  HA+I P++T TVW  L++ENK+FFE Y
Sbjct: 27 VQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDFFETY 77

The following BLAST results are available for this feature:

BLAST of CmoCh03G004600 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh03G004600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEA1	1.8e-39	100.00	uncharacterized protein LOC111453395 OS=Cucurbita moschata OX=3662 GN=LOC1114533...	[more]
A0A6J1IHY2	2.6e-38	89.47	uncharacterized protein LOC111477620 OS=Cucurbita maxima OX=3661 GN=LOC111477620...	[more]
A0A1S3BI57	2.6e-30	85.54	uncharacterized protein LOC103489916 OS=Cucumis melo OX=3656 GN=LOC103489916 PE=...	[more]
A0A0A0KZG8	3.7e-29	77.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293290 PE=4 SV=1	[more]
A0A6J1IAZ7	6.3e-29	76.60	uncharacterized protein LOC111471258 OS=Cucurbita maxima OX=3661 GN=LOC111471258...	[more]

BLAST of CmoCh03G004600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544368.1	2.1e-39	92.63	uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo] >KAG7033856.1 ...	[more]
XP_022950247.1	3.6e-39	100.00	uncharacterized protein LOC111453395 [Cucurbita moschata]	[more]
KAG6603679.1	4.8e-39	91.58	hypothetical protein SDJN03_04288, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022977252.1	5.3e-38	89.47	uncharacterized protein LOC111477620 [Cucurbita maxima]	[more]
XP_038883060.1	1.5e-32	81.72	uncharacterized protein LOC120074114 [Benincasa hispida]	[more]

BLAST of CmoCh03G004600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02580.1	6.7e-23	75.00	Plant protein 1589 of unknown function	[more]
AT3G55240.1	9.0e-20	74.55	Plant protein 1589 of unknown function	[more]
AT3G28990.1	8.4e-18	70.37	Plant protein 1589 of unknown function	[more]
AT1G10657.2	2.4e-12	52.94	Plant protein 1589 of unknown function	[more]
AT1G10657.3	2.4e-12	52.94	Plant protein 1589 of unknown function	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006476	Conserved hypothetical protein CHP01589, plant	PFAM	PF09713	A_thal_3526	coord: 37..88 e-value: 3.3E-27 score: 94.5
IPR006476	Conserved hypothetical protein CHP01589, plant	TIGRFAM	TIGR01589	TIGR01589	coord: 37..89 e-value: 7.4E-24 score: 81.5
IPR006476	Conserved hypothetical protein CHP01589, plant	PANTHER	PTHR31871	OS02G0137100 PROTEIN	coord: 35..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..121
None	No IPR available	PANTHER	PTHR31871:SF2	ARGININOSUCCINATE LYASE	coord: 35..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G004600.1	CmoCh03G004600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity