CmoCh03G004350 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G004350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Expansin
Location	Cmo_Chr03: 4977128 .. 4978871 (+)
RNA-Seq Expression	CmoCh03G004350
Synteny	CmoCh03G004350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGTCCTTTTCCTCGCCCTCCTCCCTCCATAAGTACCCCCTCTGCTTCCCTCGCATAATCCATTCACTGCAACCCTAAATTCCCATTTGCTTCTTCTCTTACACCCATCATCAACATTCATGGCTTCTCTTTCCCTCCTCTGCTGCATTTCCATTGCTTCTTTCTCCTCCCTCTTCCTCCTCTCTCACGCTAGAATTCCCGGCGTCTACTCCGCCGGTGCCTGGCAGGACGCCCACGCCACATTCTACGGCGGCAGTGATGCTTCCGGAACCATGGGTTTCTACATTTCCCTACTCTCCTCTCTTCGAATCACATTTTGATATCTCTTTTGCTTATCCGGGTTTGTTGTTTTGCAGGTGGTTCTTGTGGGTATGGGAATCTCTACAGCCAGGGGTATGGTGTTAACACTGCGGCTTTGAGTACTGCACTCTACAACAATGGCCTTAGCTGTGGTGCTTGCTTTGAGATCAAGTGCGCTAATGACCCCCAATGGTGCCATCCCGGTAGCCCTTCTATATTCATTACGGCTACCAATTTTTGTCCCCCCAATTACGCTCTTCCTAGTGACAATGGCGGCTGGTGTAACCCTCCTCGCACCCATTTCGATCTCGCTATGCCTATGTTCCTGAAAATCGCCGAGTACCGCGCCGGAATCGTTCCCGTCTCTTACCGCCGGTGAGTTTGCTTCGAATCCATTACGCCATTCCTGGATAATTGATTTTCTTGGATGTTCTCTGTTTGGTACATACTCTGTTTAATTGAATACATACAATTTCGTAATAAAAATATGTAGTTCATATACTATAAACTGAAAAATGCAGCAAATATTTTATTTCTGATCTAGAAATTTATGTTTCCATCATGTTTTTCTGGAATCAAACCTGCCTGAGTTCATTATTTTCCCTCGGATAAAGTGGGATTATCCTTTTAATTTGAATATAATTTATTGTTATTACAGGGTGCCATGTAGGAAACAAGGGGGAATCAGGTTCACAATCAACGGTTTCCGTTACTTCAACTTGGTATTGATCACGAACGTCGCGGGTGCAGGGAATATCGTGAGGGTTAGCGTGAAAGGATCAAACACGGGTTGGATGAGCATGAGTCATAACTGGGGGCAAAATTGGCAATCCAACGTCGTTTTAGTGGGCCAGGCTCTGTCCTTCCGCGTCACCGGCAGTGACCGTCGTACCTCAACTTCATTGAACGTGGTGCCTTCTAATTGGCAGTTCGGTCAGACATTCACGGGAAAGAATTTCCGCGTTTGAAATTCCCTCCCTCCTCTTTTATCTTTTTTTTTTTTTGAAAATTTTCCCTTTTATTTACCGGGGAAATTTTTGAGTGGGGAGAGGTAAAAGTAAAACTCAGAAGTAGGACGGTCAAAATGGGTCTCTTTATAGGGTTAAAAAAAGGTCAGTAGTTAAAGTCGTGTCTAGCTTTGAATCGTAGATCTTGGAAAAGTTACCGCGGTGTGGTAACTTCTTACATTTTTACATTGTTTTGGGTTAGGGTGTTTGTTTGGTTTTATATGTGAAGTAGCGGTGGTGGTTTTGAAAATCACCGCGGTTGAAAATAGTGTAGTAGTGGGAGAGGCTGAAGTGGCTGCAATGGTAAAATATGTAGCCCGCAGCATTTTACTGCTACATACAGTAAAAAGTTGTTATGTTATATGAAATTACTTAAGAAGTGAAGTTACATTATTGTGGTTAATTTTATCTTGTATTCTCTTTTACCAAATTCCCC

mRNA sequence

GCTGTCCTTTTCCTCGCCCTCCTCCCTCCATAAGTACCCCCTCTGCTTCCCTCGCATAATCCATTCACTGCAACCCTAAATTCCCATTTGCTTCTTCTCTTACACCCATCATCAACATTCATGGCTTCTCTTTCCCTCCTCTGCTGCATTTCCATTGCTTCTTTCTCCTCCCTCTTCCTCCTCTCTCACGCTAGAATTCCCGGCGTCTACTCCGCCGGTGCCTGGCAGGACGCCCACGCCACATTCTACGGCGGCAGTGATGCTTCCGGAACCATGGGTGGTTCTTGTGGGTATGGGAATCTCTACAGCCAGGGGTATGGTGTTAACACTGCGGCTTTGAGTACTGCACTCTACAACAATGGCCTTAGCTGTGGTGCTTGCTTTGAGATCAAGTGCGCTAATGACCCCCAATGGTGCCATCCCGGTAGCCCTTCTATATTCATTACGGCTACCAATTTTTGTCCCCCCAATTACGCTCTTCCTAGTGACAATGGCGGCTGGTGTAACCCTCCTCGCACCCATTTCGATCTCGCTATGCCTATGTTCCTGAAAATCGCCGAGTACCGCGCCGGAATCGTTCCCGTCTCTTACCGCCGGGTGCCATGTAGGAAACAAGGGGGAATCAGGTTCACAATCAACGGTTTCCGTTACTTCAACTTGGTATTGATCACGAACGTCGCGGGTGCAGGGAATATCGTGAGGGTTAGCGTGAAAGGATCAAACACGGGTTGGATGAGCATGAGTCATAACTGGGGGCAAAATTGGCAATCCAACGTCGTTTTAGTGGGCCAGGCTCTGTCCTTCCGCGTCACCGGCAGTGACCGTCGTACCTCAACTTCATTGAACGTGGTGCCTTCTAATTGGCAGTTCGGTCAGACATTCACGGGAAAGAATTTCCGCGTTTGAAATTCCCTCCCTCCTCTTTTATCTTTTTTTTTTTTTGAAAATTTTCCCTTTTATTTACCGGGGAAATTTTTGAGTGGGGAGAGGTAAAAGTAAAACTCAGAAGTAGGACGGTCAAAATGGGTCTCTTTATAGGGTTAAAAAAAGGTCAGTAGTTAAAGTCGTGTCTAGCTTTGAATCGTAGATCTTGGAAAAGTTACCGCGGTGTGGTAACTTCTTACATTTTTACATTGTTTTGGGTTAGGGTGTTTGTTTGGTTTTATATGTGAAGTAGCGGTGGTGGTTTTGAAAATCACCGCGGTTGAAAATAGTGTAGTAGTGGGAGAGGCTGAAGTGGCTGCAATGGTAAAATATGTAGCCCGCAGCATTTTACTGCTACATACAGTAAAAAGTTGTTATGTTATATGAAATTACTTAAGAAGTGAAGTTACATTATTGTGGTTAATTTTATCTTGTATTCTCTTTTACCAAATTCCCC

Coding sequence (CDS)

ATGGCTTCTCTTTCCCTCCTCTGCTGCATTTCCATTGCTTCTTTCTCCTCCCTCTTCCTCCTCTCTCACGCTAGAATTCCCGGCGTCTACTCCGCCGGTGCCTGGCAGGACGCCCACGCCACATTCTACGGCGGCAGTGATGCTTCCGGAACCATGGGTGGTTCTTGTGGGTATGGGAATCTCTACAGCCAGGGGTATGGTGTTAACACTGCGGCTTTGAGTACTGCACTCTACAACAATGGCCTTAGCTGTGGTGCTTGCTTTGAGATCAAGTGCGCTAATGACCCCCAATGGTGCCATCCCGGTAGCCCTTCTATATTCATTACGGCTACCAATTTTTGTCCCCCCAATTACGCTCTTCCTAGTGACAATGGCGGCTGGTGTAACCCTCCTCGCACCCATTTCGATCTCGCTATGCCTATGTTCCTGAAAATCGCCGAGTACCGCGCCGGAATCGTTCCCGTCTCTTACCGCCGGGTGCCATGTAGGAAACAAGGGGGAATCAGGTTCACAATCAACGGTTTCCGTTACTTCAACTTGGTATTGATCACGAACGTCGCGGGTGCAGGGAATATCGTGAGGGTTAGCGTGAAAGGATCAAACACGGGTTGGATGAGCATGAGTCATAACTGGGGGCAAAATTGGCAATCCAACGTCGTTTTAGTGGGCCAGGCTCTGTCCTTCCGCGTCACCGGCAGTGACCGTCGTACCTCAACTTCATTGAACGTGGTGCCTTCTAATTGGCAGTTCGGTCAGACATTCACGGGAAAGAATTTCCGCGTTTGA

Protein sequence

MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNLYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALPSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSLNVVPSNWQFGQTFTGKNFRV

Homology

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BLAST of CmoCh03G004350 vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 1.7e-129
Identity = 215/244 (88.11%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 18  LFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNLYSQGYGVNTAALSTAL 77
           LF L+ ARIPG+YS GAWQ+AHATFYGGSDASGTMGG+CGYGNLYSQGYG NTAALSTAL
Sbjct: 14  LFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTAL 73

Query: 78  YNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALPSDNGGWCNPPRTHFDL 137
           +NNG+SCGACFE+KCANDPQWCH GSPSI ITATNFCPPN A PSDNGGWCNPPR HFDL
Sbjct: 74  FNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDL 133

Query: 138 AMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGNIVRVSV 197
           AMP+FLKIA+YRAGIVPVSYRRVPCRK+GGIRFTING RYFNLVLITNVAGAG+IVR SV
Sbjct: 134 AMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASV 193

Query: 198 KGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSLNVVPSNWQFGQTFTGK 257
           KGS TGWMS+S NWGQNWQSN VLVGQALSFRVTGSDRRTSTS N+VPSNWQFGQTF GK
Sbjct: 194 KGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGK 253

Query: 258 NFRV 262
           NFRV
Sbjct: 254 NFRV 257

[Close]

BLAST of CmoCh03G004350 vs. ExPASy Swiss-Prot
Match: Q38865 (Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 449.5 bits (1155), Expect = 2.6e-125
Identity = 209/261 (80.08%), Postives = 235/261 (90.04%), Query Frame = 0


Query: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60
           MA L L+    ++  +++  LS ARIPGVY+ G W+ AHATFYGGSDASGTMGG+CGYGN
Sbjct: 1   MAMLGLV----LSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGN 60

Query: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120
           LYSQGYGVNTAALSTAL+NNG SCGACFE+KCA+DP+WCH GSPSIFITATNFCPPN+A 
Sbjct: 61  LYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQ 120

Query: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180
           PSDNGGWCNPPR HFDLAMPMFLKIAEYRAGIVPVS+RRVPCRK+GGIRFTINGFRYFNL
Sbjct: 121 PSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNL 180

Query: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240
           VL+TNVAGAGNIVR+ VKG++T WM+MS NWGQNWQSN VLVGQ+LSFRVT SDRR+STS
Sbjct: 181 VLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTS 240

Query: 241 LNVVPSNWQFGQTFTGKNFRV 262
            N+ P+NW+FGQTF GKNFRV
Sbjct: 241 WNIAPANWKFGQTFMGKNFRV 257

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BLAST of CmoCh03G004350 vs. ExPASy Swiss-Prot
Match: Q852A1 (Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 9.1e-123
Identity = 205/239 (85.77%), Postives = 215/239 (89.96%), Query Frame = 0


Query: 25  RIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNLYSQGYGVNTAALSTALYNNGLSC 84
           RIPG Y  G WQ AHATFYGGSDASGTMGG+CGYGNLYSQGYGVN AALSTAL+N+G SC
Sbjct: 26  RIPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSC 85

Query: 85  GACFEIKCANDP--QWCHPGSPSIFITATNFCPPNYALPSDNGGWCNPPRTHFDLAMPMF 144
           GACFEIKC N P  +WCHPGSPSI ITATNFCPPNYALPSDNGGWCNPPR HFDLAMPMF
Sbjct: 86  GACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMF 145

Query: 145 LKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGNIVRVSVKGSNT 204
           L IAEYRAGIVPVSYRRVPCRK+GG+RFTINGFRYFNLVLITNVAGAG+IVR SVKG++T
Sbjct: 146 LHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTST 205

Query: 205 GWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSLNVVPSNWQFGQTFTGKNFRV 262
           GWM MS NWGQNWQSN VLVGQALSFRVTGSDRRTSTS N  P+ W FGQTF GKNFRV
Sbjct: 206 GWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFRV 264

[Close]

BLAST of CmoCh03G004350 vs. ExPASy Swiss-Prot
Match: Q9M2S9 (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 8.5e-121
Identity = 201/259 (77.61%), Postives = 226/259 (87.26%), Query Frame = 0


Query: 3   SLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNLY 62
           +++ L  ++I     L   + A IP V+S G+WQ AHATFYGG+DASGTMGG+CGYGNLY
Sbjct: 2   AINPLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLY 61

Query: 63  SQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALPS 122
           SQGYG NTAALST+L+N+G SCGACFEIKC NDP+WCHPG+PS+F+TATNFCPPN A PS
Sbjct: 62  SQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPS 121

Query: 123 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 182
           DNGGWCNPPR+HFDLAMP+FLKIAEYRAGIVP+SYRRV CRK GGIRFTING RYFNLVL
Sbjct: 122 DNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVL 181

Query: 183 ITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSLN 242
           ITNVAGAG+I R SVKGS TGWMS++ NWGQNWQSN VLVGQ+LSFRVT SDRRTSTS N
Sbjct: 182 ITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWN 241

Query: 243 VVPSNWQFGQTFTGKNFRV 262
           + PSNWQFGQTF GKNFRV
Sbjct: 242 IAPSNWQFGQTFVGKNFRV 260

[Close]

BLAST of CmoCh03G004350 vs. ExPASy Swiss-Prot
Match: O80932 (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.2e-120
Identity = 199/246 (80.89%), Postives = 220/246 (89.43%), Query Frame = 0


Query: 16  SSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNLYSQGYGVNTAALST 75
           S L   ++A+IPGVYS G WQ+AHATFYGGSDASGTMGG+CGYGNLYSQGYGVNTAALST
Sbjct: 17  SFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALST 76

Query: 76  ALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALPSDNGGWCNPPRTHF 135
           AL+NNG SCGACFEIKC +DP+WC PG+PSI +TATNFCPPN+A PSD+GGWCNPPR HF
Sbjct: 77  ALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHF 136

Query: 136 DLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGNIVRV 195
           DLAMPMFLKI  YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVL+TNVAGAG+I  V
Sbjct: 137 DLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGV 196

Query: 196 SVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSLNVVPSNWQFGQTFT 255
           SVKGS T W+ MS NWGQNWQSN VL+GQ+LSFRVT SDRR+STS NV P+ WQFGQTF+
Sbjct: 197 SVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFS 256

Query: 256 GKNFRV 262
           GKNFRV
Sbjct: 257 GKNFRV 262

[Close]

BLAST of CmoCh03G004350 vs. ExPASy TrEMBL
Match: A0A6J1GFN0 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111453739 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 3.7e-151
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60
           MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN
Sbjct: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60

Query: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120
           LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL
Sbjct: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120

Query: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180
           PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL
Sbjct: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180

Query: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240
           VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS
Sbjct: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240

Query: 241 LNVVPSNWQFGQTFTGKNFRV 262
           LNVVPSNWQFGQTFTGKNFRV
Sbjct: 241 LNVVPSNWQFGQTFTGKNFRV 261

[Close]

BLAST of CmoCh03G004350 vs. ExPASy TrEMBL
Match: A0A6J1ISD0 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111478867 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.1e-150
Identity = 259/261 (99.23%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60
           MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN
Sbjct: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60

Query: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120
           LYSQGYGVNTAALSTALYNNGL CGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL
Sbjct: 61  LYSQGYGVNTAALSTALYNNGLRCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120

Query: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180
           PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL
Sbjct: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180

Query: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240
           VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQ+LSFRVTGSDRRTSTS
Sbjct: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQSLSFRVTGSDRRTSTS 240

Query: 241 LNVVPSNWQFGQTFTGKNFRV 262
           LNVVPSNWQFGQTFTGKNFRV
Sbjct: 241 LNVVPSNWQFGQTFTGKNFRV 261

[Close]

BLAST of CmoCh03G004350 vs. ExPASy TrEMBL
Match: A0A5A7STM7 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold184G00420 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.0e-137
Identity = 239/260 (91.92%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 2   ASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNL 61
           +SLSLL  +   +FSSLFLLSHARIPGVYS G WQDAHATFYGGSDASGTMGG+CGYGNL
Sbjct: 3   SSLSLLFSL---AFSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNL 62

Query: 62  YSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALP 121
           YSQGYGVNTAALSTAL+NNGLSCGACFEIKCANDP+WCHPGSPSIFITATNFCPPN+ALP
Sbjct: 63  YSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALP 122

Query: 122 SDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV 181
           +DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 123 NDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV 182

Query: 182 LITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSL 241
           LITNVAGAG+IVRVSVKGSNTGWMSMS NWGQNWQSN VLVGQ LSFRVTGSDRRTSTS 
Sbjct: 183 LITNVAGAGDIVRVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRVTGSDRRTSTSW 242

Query: 242 NVVPSNWQFGQTFTGKNFRV 262
           NV PSNWQFGQTFTGKNFRV
Sbjct: 243 NVAPSNWQFGQTFTGKNFRV 259

[Close]

BLAST of CmoCh03G004350 vs. ExPASy TrEMBL
Match: Q06BI7 (Expansin OS=Cucumis melo OX=3656 GN=EXP1 PE=2 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.0e-137
Identity = 238/260 (91.54%), Postives = 247/260 (95.00%), Query Frame = 0


Query: 2   ASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNL 61
           +SLSLL  +   +FSSLFL SHARIPGVYS G WQDAHATFYGGSDASGTMGG+CGYGNL
Sbjct: 3   SSLSLLFSL---AFSSLFLFSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNL 62

Query: 62  YSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALP 121
           YSQGYGVNTAALSTAL+NNGLSCGACFEIKCANDP+WCHPGSPSIFITATNFCPPN+ALP
Sbjct: 63  YSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALP 122

Query: 122 SDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV 181
           +DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 123 NDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV 182

Query: 182 LITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSL 241
           LITNVAGAG+IVRVSVKGSNTGWMSMS NWGQNWQSN VLVGQ LSFRVTGSDRRTSTS 
Sbjct: 183 LITNVAGAGDIVRVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRVTGSDRRTSTSW 242

Query: 242 NVVPSNWQFGQTFTGKNFRV 262
           NV PSNWQFGQTFTGKNFRV
Sbjct: 243 NVAPSNWQFGQTFTGKNFRV 259

[Close]

BLAST of CmoCh03G004350 vs. ExPASy TrEMBL
Match: A0A0A0L282 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_4G296100 PE=3 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.4e-136
Identity = 235/260 (90.38%), Postives = 247/260 (95.00%), Query Frame = 0


Query: 2   ASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNL 61
           +SLSLL  + +   SSLFLLSHARIPGVYS G WQDAHATFYGGSDASGTMGG+CGYGNL
Sbjct: 3   SSLSLLFSLFL---SSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGNL 62

Query: 62  YSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALP 121
           YSQGYGVNTAALSTAL+NNGLSCGACFEIKCANDP+WCHPGSPSIFITATNFCPPN+ALP
Sbjct: 63  YSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHPGSPSIFITATNFCPPNFALP 122

Query: 122 SDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV 181
           +DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 123 NDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV 182

Query: 182 LITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSL 241
           LITNVAGAG+IV+VSVKGSNTGWMSMS NWGQNWQSN VLVGQ LSFR+TGSDRRTSTS 
Sbjct: 183 LITNVAGAGDIVKVSVKGSNTGWMSMSRNWGQNWQSNAVLVGQTLSFRLTGSDRRTSTSW 242

Query: 242 NVVPSNWQFGQTFTGKNFRV 262
           NV PSNWQFGQTFTGKNFR+
Sbjct: 243 NVAPSNWQFGQTFTGKNFRI 259

[Close]

BLAST of CmoCh03G004350 vs. NCBI nr
Match: XP_022950727.1 (expansin-A4-like [Cucurbita moschata] >KAG7033834.1 Expansin-A4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 543.9 bits (1400), Expect = 7.6e-151
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60
           MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN
Sbjct: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60

Query: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120
           LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL
Sbjct: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120

Query: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180
           PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL
Sbjct: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180

Query: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240
           VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS
Sbjct: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240

Query: 241 LNVVPSNWQFGQTFTGKNFRV 262
           LNVVPSNWQFGQTFTGKNFRV
Sbjct: 241 LNVVPSNWQFGQTFTGKNFRV 261

[Close]

BLAST of CmoCh03G004350 vs. NCBI nr
Match: XP_023544172.1 (expansin-A4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542.7 bits (1397), Expect = 1.7e-150
Identity = 260/261 (99.62%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60
           MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN
Sbjct: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60

Query: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120
           LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL
Sbjct: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120

Query: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180
           PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL
Sbjct: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180

Query: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240
           VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQ+LSFRVTGSDRRTSTS
Sbjct: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQSLSFRVTGSDRRTSTS 240

Query: 241 LNVVPSNWQFGQTFTGKNFRV 262
           LNVVPSNWQFGQTFTGKNFRV
Sbjct: 241 LNVVPSNWQFGQTFTGKNFRV 261

[Close]

BLAST of CmoCh03G004350 vs. NCBI nr
Match: KAG6603650.1 (Expansin-A4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 540.8 bits (1392), Expect = 6.4e-150
Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60
           MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN
Sbjct: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60

Query: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120
           LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL
Sbjct: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120

Query: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180
           PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRV CRKQGGIRFTINGFRYFNL
Sbjct: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVACRKQGGIRFTINGFRYFNL 180

Query: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240
           VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS
Sbjct: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240

Query: 241 LNVVPSNWQFGQTFTGKNFRV 262
           LNVVPSNWQFGQTFTGKNFRV
Sbjct: 241 LNVVPSNWQFGQTFTGKNFRV 261

[Close]

BLAST of CmoCh03G004350 vs. NCBI nr
Match: XP_022979135.1 (expansin-A4-like [Cucurbita maxima])

HSP 1 Score: 540.8 bits (1392), Expect = 6.4e-150
Identity = 259/261 (99.23%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60
           MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN
Sbjct: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60

Query: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120
           LYSQGYGVNTAALSTALYNNGL CGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL
Sbjct: 61  LYSQGYGVNTAALSTALYNNGLRCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120

Query: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180
           PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL
Sbjct: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180

Query: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240
           VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQ+LSFRVTGSDRRTSTS
Sbjct: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQSLSFRVTGSDRRTSTS 240

Query: 241 LNVVPSNWQFGQTFTGKNFRV 262
           LNVVPSNWQFGQTFTGKNFRV
Sbjct: 241 LNVVPSNWQFGQTFTGKNFRV 261

[Close]

BLAST of CmoCh03G004350 vs. NCBI nr
Match: XP_038880867.1 (expansin-A4-like [Benincasa hispida])

HSP 1 Score: 514.2 bits (1323), Expect = 6.5e-142
Identity = 245/261 (93.87%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60
           MASLSLLC I+  SFSSLFLLSHARIPGVYS G WQDAHATFYGGSDASGTMGG+CGYGN
Sbjct: 1   MASLSLLCSIAFVSFSSLFLLSHARIPGVYSGGPWQDAHATFYGGSDASGTMGGACGYGN 60

Query: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120
           LYSQGYGVNTAALSTAL+NNGLSCGACFEIKCANDP+WCHPGSPSIFITATNFCPPN+AL
Sbjct: 61  LYSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPKWCHPGSPSIFITATNFCPPNFAL 120

Query: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180
           P+DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL
Sbjct: 121 PNDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180

Query: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240
           VLITNVAGAG+IVRVSVKGSNTGWMSMS NWGQNWQSN VLVGQALSFRVTGSDRRTSTS
Sbjct: 181 VLITNVAGAGDIVRVSVKGSNTGWMSMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTS 240

Query: 241 LNVVPSNWQFGQTFTGKNFRV 262
            NV PSNWQFGQTFTGKNFRV
Sbjct: 241 WNVAPSNWQFGQTFTGKNFRV 261

[Close]

BLAST of CmoCh03G004350 vs. TAIR 10
Match: AT2G39700.1 (expansin A4 )

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-130
Identity = 215/244 (88.11%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 18  LFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNLYSQGYGVNTAALSTAL 77
           LF L+ ARIPG+YS GAWQ+AHATFYGGSDASGTMGG+CGYGNLYSQGYG NTAALSTAL
Sbjct: 14  LFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTAL 73

Query: 78  YNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALPSDNGGWCNPPRTHFDL 137
           +NNG+SCGACFE+KCANDPQWCH GSPSI ITATNFCPPN A PSDNGGWCNPPR HFDL
Sbjct: 74  FNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDL 133

Query: 138 AMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGNIVRVSV 197
           AMP+FLKIA+YRAGIVPVSYRRVPCRK+GGIRFTING RYFNLVLITNVAGAG+IVR SV
Sbjct: 134 AMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASV 193

Query: 198 KGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSLNVVPSNWQFGQTFTGK 257
           KGS TGWMS+S NWGQNWQSN VLVGQALSFRVTGSDRRTSTS N+VPSNWQFGQTF GK
Sbjct: 194 KGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGK 253

Query: 258 NFRV 262
           NFRV
Sbjct: 254 NFRV 257

[Close]

BLAST of CmoCh03G004350 vs. TAIR 10
Match: AT2G28950.1 (expansin A6 )

HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-126
Identity = 209/261 (80.08%), Postives = 235/261 (90.04%), Query Frame = 0


Query: 1   MASLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGN 60
           MA L L+    ++  +++  LS ARIPGVY+ G W+ AHATFYGGSDASGTMGG+CGYGN
Sbjct: 1   MAMLGLV----LSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGN 60

Query: 61  LYSQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYAL 120
           LYSQGYGVNTAALSTAL+NNG SCGACFE+KCA+DP+WCH GSPSIFITATNFCPPN+A 
Sbjct: 61  LYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQ 120

Query: 121 PSDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL 180
           PSDNGGWCNPPR HFDLAMPMFLKIAEYRAGIVPVS+RRVPCRK+GGIRFTINGFRYFNL
Sbjct: 121 PSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNL 180

Query: 181 VLITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTS 240
           VL+TNVAGAGNIVR+ VKG++T WM+MS NWGQNWQSN VLVGQ+LSFRVT SDRR+STS
Sbjct: 181 VLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTS 240

Query: 241 LNVVPSNWQFGQTFTGKNFRV 262
            N+ P+NW+FGQTF GKNFRV
Sbjct: 241 WNIAPANWKFGQTFMGKNFRV 257

[Close]

BLAST of CmoCh03G004350 vs. TAIR 10
Match: AT3G55500.1 (expansin A16 )

HSP 1 Score: 434.5 bits (1116), Expect = 6.1e-122
Identity = 201/259 (77.61%), Postives = 226/259 (87.26%), Query Frame = 0


Query: 3   SLSLLCCISIASFSSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNLY 62
           +++ L  ++I     L   + A IP V+S G+WQ AHATFYGG+DASGTMGG+CGYGNLY
Sbjct: 2   AINPLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLY 61

Query: 63  SQGYGVNTAALSTALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALPS 122
           SQGYG NTAALST+L+N+G SCGACFEIKC NDP+WCHPG+PS+F+TATNFCPPN A PS
Sbjct: 62  SQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPS 121

Query: 123 DNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVL 182
           DNGGWCNPPR+HFDLAMP+FLKIAEYRAGIVP+SYRRV CRK GGIRFTING RYFNLVL
Sbjct: 122 DNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVL 181

Query: 183 ITNVAGAGNIVRVSVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSLN 242
           ITNVAGAG+I R SVKGS TGWMS++ NWGQNWQSN VLVGQ+LSFRVT SDRRTSTS N
Sbjct: 182 ITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWN 241

Query: 243 VVPSNWQFGQTFTGKNFRV 262
           + PSNWQFGQTF GKNFRV
Sbjct: 242 IAPSNWQFGQTFVGKNFRV 260

[Close]

BLAST of CmoCh03G004350 vs. TAIR 10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein )

HSP 1 Score: 432.2 bits (1110), Expect = 3.0e-121
Identity = 199/246 (80.89%), Postives = 220/246 (89.43%), Query Frame = 0


Query: 16  SSLFLLSHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNLYSQGYGVNTAALST 75
           S L   ++A+IPGVYS G WQ+AHATFYGGSDASGTMGG+CGYGNLYSQGYGVNTAALST
Sbjct: 17  SFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALST 76

Query: 76  ALYNNGLSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALPSDNGGWCNPPRTHF 135
           AL+NNG SCGACFEIKC +DP+WC PG+PSI +TATNFCPPN+A PSD+GGWCNPPR HF
Sbjct: 77  ALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHF 136

Query: 136 DLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGNIVRV 195
           DLAMPMFLKI  YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVL+TNVAGAG+I  V
Sbjct: 137 DLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGV 196

Query: 196 SVKGSNTGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSLNVVPSNWQFGQTFT 255
           SVKGS T W+ MS NWGQNWQSN VL+GQ+LSFRVT SDRR+STS NV P+ WQFGQTF+
Sbjct: 197 SVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFS 256

Query: 256 GKNFRV 262
           GKNFRV
Sbjct: 257 GKNFRV 262

[Close]

BLAST of CmoCh03G004350 vs. TAIR 10
Match: AT5G02260.1 (expansin A9 )

HSP 1 Score: 420.6 bits (1080), Expect = 9.1e-118
Identity = 188/240 (78.33%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 22  SHARIPGVYSAGAWQDAHATFYGGSDASGTMGGSCGYGNLYSQGYGVNTAALSTALYNNG 81
           ++A+IPGVY+ G W +AHATFYG +DASGTMGG+CGYGNLYSQGYGVNTAALSTAL+NNG
Sbjct: 19  ANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNG 78

Query: 82  LSCGACFEIKCANDPQWCHPGSPSIFITATNFCPPNYALPSDNGGWCNPPRTHFDLAMPM 141
           LSCG+CFE+KC NDP WC PG+PSI ITATNFCPPN+   SDNGGWCNPPR HFDLAMPM
Sbjct: 79  LSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPM 138

Query: 142 FLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGNIVRVSVKGSN 201
           FL IA+Y+AGIVPVSYRR+PCRK+GGIRFTINGF+YFNLVL+TNVAGAG++++VSVKGSN
Sbjct: 139 FLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSN 198

Query: 202 TGWMSMSHNWGQNWQSNVVLVGQALSFRVTGSDRRTSTSLNVVPSNWQFGQTFTGKNFRV 261
           T W+ +S NWGQNWQSN +LVGQ+LSFRV  SD R+STS N+ PSNWQFGQT++GKNFRV
Sbjct: 199 TQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFRV 258

The following BLAST results are available for this feature:

BLAST of CmoCh03G004350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48818	1.7e-129	88.11	Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1	[more]
Q38865	2.6e-125	80.08	Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2	[more]
Q852A1	9.1e-123	85.77	Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1	[more]
Q9M2S9	8.5e-121	77.61	Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1	[more]
O80932	4.2e-120	80.89	Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1	[more]

BLAST of CmoCh03G004350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFN0	3.7e-151	100.00	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111453739 PE=3 SV=1	[more]
A0A6J1ISD0	3.1e-150	99.23	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111478867 PE=3 SV=1	[more]
A0A5A7STM7	1.0e-137	91.92	Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold184G00420 PE=3 ...	[more]
Q06BI7	3.0e-137	91.54	Expansin OS=Cucumis melo OX=3656 GN=EXP1 PE=2 SV=1	[more]
A0A0A0L282	4.4e-136	90.38	Expansin OS=Cucumis sativus OX=3659 GN=Csa_4G296100 PE=3 SV=1	[more]

BLAST of CmoCh03G004350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950727.1	7.6e-151	100.00	expansin-A4-like [Cucurbita moschata] >KAG7033834.1 Expansin-A4 [Cucurbita argyr...	[more]
XP_023544172.1	1.7e-150	99.62	expansin-A4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6603650.1	6.4e-150	99.62	Expansin-A4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022979135.1	6.4e-150	99.23	expansin-A4-like [Cucurbita maxima]	[more]
XP_038880867.1	6.5e-142	93.87	expansin-A4-like [Benincasa hispida]	[more]

BLAST of CmoCh03G004350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39700.1	1.2e-130	88.11	expansin A4	[more]
AT2G28950.1	1.8e-126	80.08	expansin A6	[more]
AT3G55500.1	6.1e-122	77.61	expansin A16	[more]
AT2G37640.1	3.0e-121	80.89	Barwin-like endoglucanases superfamily protein	[more]
AT5G02260.1	9.1e-118	78.33	expansin A9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 242..256 score: 59.17 coord: 204..218 score: 66.33 coord: 52..70 score: 71.71 coord: 74..92 score: 68.29 coord: 150..166 score: 68.53 coord: 34..49 score: 67.66
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 213..234 score: 72.27 coord: 242..258 score: 66.47 coord: 65..79 score: 83.33 coord: 142..155 score: 78.33 coord: 178..199 score: 70.76 coord: 106..116 score: 83.94 coord: 125..142 score: 78.89 coord: 92..103 score: 56.11 coord: 166..178 score: 84.1
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 70..157 e-value: 1.7E-58 score: 210.3
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 53..167 score: 30.672594
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 70..157 e-value: 3.1E-22 score: 78.7
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 168..245 e-value: 5.9E-25 score: 87.1
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 177..256 score: 21.327717
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 22..163 e-value: 9.8E-47 score: 160.5
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 34..185
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 167..259 e-value: 3.4E-23 score: 83.4
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 164..256
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 7..260
None	No IPR available	PANTHER	PTHR31867:SF100	EXPANSIN	coord: 7..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G004350.1	CmoCh03G004350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane