Homology
BLAST of CmoCh03G003980 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 733.8 bits (1893), Expect = 3.5e-210
Identity = 468/1357 (34.49%), Postives = 737/1357 (54.31%), Query Frame = 0
Query: 16 FNGEK-YEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKNDAKALFIIQ 75
FNG+ + W +M+ LL Q L +++ VD +P + E + D +A I+
Sbjct: 11 FNGDNGFSTWQRRMRDLLIQQGLHKVLD---VDSKKPDTMKAEDWADL---DERAASAIR 70
Query: 76 QAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMTNGESIADF 135
+ + + + I T++ W+ L+ + SK + KL L++ L M+ G +
Sbjct: 71 LHLSDDVVNNIIDEDTARGIWTRLESLYM--SKTLTNKLY-LKKQLYALHMSEGTNFLSH 130
Query: 136 LSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILSVDELMGSL 195
L+ +++Q+ G KI +E +L SL +D++ I K L
Sbjct: 131 LNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIEL--------- 190
Query: 196 QAHEARINRASERNEEKALQVKETTNNERENSHLAGRSRGRGGFRSFHGGRDNRGRWRSD 255
++ AL + E + EN A + GRG RS+ +N GR +
Sbjct: 191 ------------KDVTSALLLNEKMRKKPENQGQALITEGRG--RSYQRSSNNYGRSGAR 250
Query: 256 GQRQFNEQKNVIQCYYCKRYGHTKSNC-----------WYKNQQMNFAAENEEEEEKLLM 315
G+ + + V CY C + GH K +C KN N AA + + +L
Sbjct: 251 GKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDD-NTAAMVQNNDNVVLF 310
Query: 316 -----ACMDTNPRKGDLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKG 375
CM + + + W VD+ S+H T + LF V++GNT ++ G G
Sbjct: 311 INEEEECMHLSGPESE-WVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIG 370
Query: 376 TVKVETGHGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGHKVQI 435
+ ++T G L +V+ VPDL NL+S L G+ F + +T K +
Sbjct: 371 DICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLT--KGSLVIAK 430
Query: 436 AMTSNKMFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRIDS 495
+ ++ + + AA + LWH R GH+ GL+IL K ++ + +
Sbjct: 431 GVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLI-SYAKGTT 490
Query: 496 TNLCEGCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSR 555
C+ C++GKQ R SF R+ + L+L+++D+CGPM+ S+GG+ YF+ FIDD SR
Sbjct: 491 VKPCDYCLFGKQHRVSFQTSSERKL-NILDLVYSDVCGPMEIESMGGNKYFVTFIDDASR 550
Query: 556 MSWVYFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQRE 615
WVY L+ K + FQ FQ F A+VE ++GR +K LR+D GGE+ S+EF +C GI+ E
Sbjct: 551 KLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHE 610
Query: 616 LTAPYTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVMNR 675
T P TP+ NG+AER NRTIVE RSML+ +LP FW EAV T+ YL+N SP+ +
Sbjct: 611 KTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFE 670
Query: 676 TPYEAWHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYNPI 735
P W ++ S SHL++FGC A+A + R KLD+KS CIFIGY + Y+L++P+
Sbjct: 671 IPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPV 730
Query: 736 SEKILVRRDVIFNENVSWDWSKEQEQQKITVEVSPNEETRVNSSASP-NVSTATQNVSNS 795
+K++ RDV+F E S + +K+ + PN T ++S +P + + T VS
Sbjct: 731 KKKVIRSRDVVFRE--SEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQ 790
Query: 796 SS------SASLNSDSSLEELSDETP----------PKKYKSLTDIYASCQFALTVSD-- 855
D +EE+ T ++ + + Y S ++ L D
Sbjct: 791 GEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDRE 850
Query: 856 PMCYDEA---AEREEWKKAMVEEMQSIEKNGTWEMVDLPNEKNAINLKWVFKTKFAPDGS 915
P E E+ + KAM EEM+S++KNGT+++V+LP K + KWVFK K D
Sbjct: 851 PESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCK 910
Query: 916 IQKHKARLVAKGYAQQQGIDFEETFSPVARFETVRTILALAAELRWPVYQFDVKSAFLNG 975
+ ++KARLV KG+ Q++GIDF+E FSPV + ++RTIL+LAA L V Q DVK+AFL+G
Sbjct: 911 LVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHG 970
Query: 976 DLQEEVYVAQPEGFIKKDKETKVYKLRKALYGLKQAPRAWYSKIDGYFQKKGYMRSENEP 1035
DL+EE+Y+ QPEGF K+ V KL K+LYGLKQAPR WY K D + + + Y+++ ++P
Sbjct: 971 DLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDP 1030
Query: 1036 TLYVKKEGKSDFIIICLYVDDIIYTSSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVY 1095
+Y K+ +++FII+ LYVDD++ L+ K K + F+M D+G LG+++
Sbjct: 1031 CVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIV 1090
Query: 1096 QVEDG--IFISQRKYAKDIMSKFGMLNCKPAATP----MNINEKLQHDDGAEMTDARR-- 1155
+ +++SQ KY + ++ +F M N KP +TP + +++K+ E + +
Sbjct: 1091 RERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVP 1150
Query: 1156 FRSLVGGLIY-LTHTRPDIAFPVGIISKFMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSK 1215
+ S VG L+Y + TRPDIA VG++S+F+++P K H+ A K +LRY+ GT + +
Sbjct: 1151 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG 1210
Query: 1216 SSNFKLYGFTDSDWAGSLDDRRSISANVFTLGSGAITWSSKKQATVALSTSEAEYVAATS 1275
S L G+TD+D AG +D+R+S + +FT GAI+W SK Q VALST+EAEY+AAT
Sbjct: 1211 SDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATE 1270
Query: 1276 AACQAIWLRRMLADLQQEQKGATKIFCDNKATISMTKNPAFHSRTKHIELRHHYIRDLVA 1325
+ IWL+R L +L QK ++CD+++ I ++KN +H+RTKHI++R+H+IR++V
Sbjct: 1271 TGKEMIWLKRFLQELGLHQKEYV-VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVD 1325
BLAST of CmoCh03G003980 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 578.9 bits (1491), Expect = 1.4e-163
Identity = 415/1436 (28.90%), Postives = 711/1436 (49.51%), Query Frame = 0
Query: 16 FNGEKYEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKNDAKALFIIQQ 75
F+GEKY W +++ LL Q++ +V+ + ++ + ++ ER AK+ I +
Sbjct: 11 FDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERC-------AKSTII--E 70
Query: 76 AVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMTNGESIADFL 135
+ ++ + + T++Q L ++ S + +LR+ +L +++ S+
Sbjct: 71 YLSDSFLNFATSDITARQILENLDAVYERKS---LASQLALRKRLLSLKLSSEMSLLSHF 130
Query: 136 SRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILSVDELMGSLQ 195
++S++ G KI + ++ +L +L +D ++ AIE + + L++ + L
Sbjct: 131 HIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEEN-LTLAFVKNRLL 190
Query: 196 AHEARINRASERNEEKALQVKETTNNERENSHLAGRSRGRGGFRSFHGGRDNRGRWRSDG 255
E +I +K + NN ++L ++R + F G
Sbjct: 191 DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLF-KNRVTKPKKIFKG------------ 250
Query: 256 QRQFNEQKNVIQCYYCKRYGHTKSNCW-YKNQQMNFAAENEEEEEK--------LLMACM 315
K ++C++C R GH K +C+ YK N ENE++ + ++
Sbjct: 251 -----NSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVN 310
Query: 316 DTNPRKGDLWFVDSGCSNHMTGTKSLFKE-LDETQKIKVQLGNTKE-MQVEGKGTVKVET 375
+T+ + +DSG S+H+ +SL+ + ++ +K+ + E + +G V++
Sbjct: 311 NTSVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRN 370
Query: 376 GHGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGHKVQIAMTSNK 435
H L++V F + NL+SV +L G S+ FD + +T K+G + + S
Sbjct: 371 DHE--ITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSG--VTISKNG--LMVVKNSGM 430
Query: 436 MFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRID----STN 495
+ + + N + +++ A K++ LWH R+GH+ L ++ K M ++ S
Sbjct: 431 LNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCE 490
Query: 496 LCEGCIYGKQTRKSFPVGKAR-RASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSRM 555
+CE C+ GKQ R F K + L ++H+D+CGP+ +L YF++F+D ++
Sbjct: 491 ICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHY 550
Query: 556 SWVYFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQREL 615
Y +++KS+ F FQ F A E + L D G E++S E FC ++GI L
Sbjct: 551 CVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHL 610
Query: 616 TAPYTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVM--N 675
T P+TP+ NG++ER RTI E AR+M+ +L FW EAV T+ YL+N P++A++ +
Sbjct: 611 TVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSS 670
Query: 676 RTPYEAWHRRKPSVSHLRIFGCVAYA-LKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYN 735
+TPYE WH +KP + HLR+FG Y +K Q K D+KS K IF+GY + +KL++
Sbjct: 671 KTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQ--GKFDDKSFKSIFVGY--EPNGFKLWD 730
Query: 736 PISEKILVRRDVIFN------------ENVSWDWSKEQEQQK--------ITVEVS---- 795
++EK +V RDV+ + E V SKE E + I E
Sbjct: 731 AVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESK 790
Query: 796 -------------------PNEETRVNSSASPNVSTATQNV------------------- 855
PN+ ++ + PN S N+
Sbjct: 791 ECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKK 850
Query: 856 -------------SNSSSSASLNSDSSLEELSDETPPKK------YKSLTDIYASCQFAL 915
N + S + L+E+ + P K + + Q +
Sbjct: 851 RKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISY 910
Query: 916 TVSD-----------------PMCYDEAAEREE---WKKAMVEEMQSIEKNGTWEMVDLP 975
D P +DE R++ W++A+ E+ + + N TW + P
Sbjct: 911 NEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRP 970
Query: 976 NEKNAINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQGIDFEETFSPVARFETVRTILA 1035
KN ++ +WVF K+ G+ ++KARLVA+G+ Q+ ID+EETF+PVAR + R IL+
Sbjct: 971 ENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILS 1030
Query: 1036 LAAELRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDKETKVYKLRKALYGLKQAPRA 1095
L + V+Q DVK+AFLNG L+EE+Y+ P+G V KL KA+YGLKQA R
Sbjct: 1031 LVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARC 1090
Query: 1096 WYSKIDGYFQKKGYMRSENEPTLYVKKEGK-SDFIIICLYVDDIIYTSSSNSLLDKFKSQ 1155
W+ + ++ ++ S + +Y+ +G ++ I + LYVDD++ + + ++ FK
Sbjct: 1091 WFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRY 1150
Query: 1156 MMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDIMSKFGMLNCKPAATPM--NIN 1215
+M +F M+D+ + +F+G+ + ED I++SQ Y K I+SKF M NC +TP+ IN
Sbjct: 1151 LMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKIN 1210
Query: 1216 EKLQHDDGAEMTDARRFRSLVGGLIY-LTHTRPDIAFPVGIISKFMQHPSKVHYGAAKRV 1275
+L + D T RSL+G L+Y + TRPD+ V I+S++ + + KRV
Sbjct: 1211 YELLNSDEDCNTPC---RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRV 1270
Query: 1276 LRYIAGTMEYGIWYSKSSNF--KLYGFTDSDWAGSLDDRRSISANVFTL-GSGAITWSSK 1325
LRY+ GT++ + + K+ F K+ G+ DSDWAGS DR+S + +F + I W++K
Sbjct: 1271 LRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTK 1330
BLAST of CmoCh03G003980 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 553.1 bits (1424), Expect = 8.4e-156
Identity = 406/1415 (28.69%), Postives = 673/1415 (47.56%), Query Frame = 0
Query: 63 KKNDAKALFIIQQAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFET 122
++ D I A+ ++ ++ ATT+ Q W L+K + S + +L+ + R
Sbjct: 78 RRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITR---- 137
Query: 123 LLMTNGESIADFLSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDL 182
Q+ G+ + + V +VL +L + V+ I AKD
Sbjct: 138 -------------------FDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQI-AAKD- 197
Query: 183 SILSVDELMGSLQAHEARINRASERNEEKALQVKETTNN--ERENSHLAGRSRGRGGFRS 242
+ S+ E+ HE INR S+ + +V T N N++ RG R+
Sbjct: 198 TPPSLTEI------HERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRN 257
Query: 243 FHGGRDNRGRWR--SDGQRQFNEQKN--VIQCYYCKRYGHTKSNCWYKNQQMNFAAENEE 302
++ + W+ S G R N Q + +C C GH+ C +Q + + +
Sbjct: 258 YNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQS 317
Query: 303 E------EEKLLMACMDTNPRKGDLWFVDSGCSNHMTGT-KSLFKELDETQKIKVQLGNT 362
+ + +A +P + W +DSG ++H+T +L T V + +
Sbjct: 318 TSPFTPWQPRANLAV--NSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADG 377
Query: 363 KEMQVEGKGTVKVETGHGKIKQLDNVQFVPDLGYNLLSVGQLM-TRGHSVLFDDNTCVIT 422
+ + G+ + T + L+ V +VP++ NL+SV +L T SV F + +
Sbjct: 378 STIPITHTGSASLPTSSRSL-DLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVK 437
Query: 423 HKKSGHKVQIAMTSNKMFPLDISNMEDFALAAS--TKDDSTLWHLRYGHLHMNGLKILRN 482
+G + T ++++ I++ + ++ AS +K + WH R GH L IL +
Sbjct: 438 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGH---PSLAILNS 497
Query: 483 KGMVFGLPRIDSTN---LCEGCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSL 542
LP ++ ++ C C K + F +S LE I++D+ S+
Sbjct: 498 VISNHSLPVLNPSHKLLSCSDCFINKSHKVPFS-NSTITSSKPLEYIYSDVWS-SPILSI 557
Query: 543 GGSIYFLLFIDDYSRMSWVYFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFIS 602
Y+++F+D ++R +W+Y L+ KS+ F +FK++VEN+ I L +D GGEF+
Sbjct: 558 DNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV- 617
Query: 603 KEFNLFCEEEGIQRELTAPYTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATS 662
+ + GI + P+TPE NG++ERK+R IVEM ++L +P +W A + +
Sbjct: 618 -VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVA 677
Query: 663 VYLLNISPTKAVMNRTPYEAWHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFI 722
VYL+N PT + ++P++ + P+ L++FGC Y RP R KL++KS++C F+
Sbjct: 678 VYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFM 737
Query: 723 GYCTQSKAYKLYNPISEKILVRRDVIFNE------NVSWDWSKEQEQQK----------- 782
GY AY + + ++ R V F+E ++ S QEQ+
Sbjct: 738 GYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTT 797
Query: 783 -------------------------------ITVEVS----------------------- 842
T +VS
Sbjct: 798 LPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHN 857
Query: 843 -------PNEETRVNSSA----SPNVSTATQNVSNSSS---------------SASLNSD 902
P++ NS++ +PN ++ + N N +S S S++
Sbjct: 858 GPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEP 917
Query: 903 SSLEELSDETPP------------------------------------KKYKSLTDIYAS 962
+S S TPP +KY T + A+
Sbjct: 918 NSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAAN 977
Query: 963 CQFALTVSDPMCYDEAAEREEWKKAMVEEMQSIEKNGTWEMVDLPNEK-NAINLKWVFKT 1022
S+P +A + + W++AM E+ + N TW++V P + +W+F
Sbjct: 978 -------SEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1037
Query: 1023 KFAPDGSIQKHKARLVAKGYAQQQGIDFEETFSPVARFETVRTILALAAELRWPVYQFDV 1082
KF DGS+ ++KARLVAKGY Q+ G+D+ ETFSPV + ++R +L +A + WP+ Q DV
Sbjct: 1038 KFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1097
Query: 1083 KSAFLNGDLQEEVYVAQPEGFIKKDKETKVYKLRKALYGLKQAPRAWYSKIDGYFQKKGY 1142
+AFL G L +EVY++QP GF+ KD+ V +LRKA+YGLKQAPRAWY ++ Y G+
Sbjct: 1098 NNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGF 1157
Query: 1143 MRSENEPTLYVKKEGKSDFIIICLYVDDIIYTSSSNSLLDKFKSQMMSEFEMSDMGLLHY 1202
+ S ++ +L+V + G+S I + +YVDDI+ T + LL + F + + LHY
Sbjct: 1158 VNSISDTSLFVLQRGRS-IIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHY 1217
Query: 1203 FLGLEVYQVEDGIFISQRKYAKDIMSKFGMLNCKPAATPMNINEKLQHDDGAEMTDARRF 1262
FLG+E +V G+ +SQR+Y D++++ ML KP ATPM + KL G ++ D +
Sbjct: 1218 FLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEY 1277
Query: 1263 RSLVGGLIYLTHTRPDIAFPVGIISKFMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSKSS 1322
R +VG L YL TRPD+++ V +S++M P+ H+ A KRVLRY+AGT ++GI+ K +
Sbjct: 1278 RGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGN 1337
Query: 1323 NFKLYGFTDSDWAGSLDDRRSISANVFTLGSGAITWSSKKQATVALSTSEAEYVAATSAA 1325
L+ ++D+DWAG DD S + + LG I+WSSKKQ V S++EAEY + + +
Sbjct: 1338 TLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTS 1397
BLAST of CmoCh03G003980 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 551.2 bits (1419), Expect = 3.2e-155
Identity = 401/1407 (28.50%), Postives = 664/1407 (47.19%), Query Frame = 0
Query: 63 KKNDAKALFIIQQAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFET 122
K+ D + A+ ++ ++ ATT+ Q W L+K + S + +L++ + +
Sbjct: 78 KRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQW-- 137
Query: 123 LLMTNG-ESIADFLSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKD 182
T G ++I D++ + Q+ G+ + + V +VL +L ++ V+ I AKD
Sbjct: 138 ---TKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQI-AAKD 197
Query: 183 LSILSVDELMGSLQAHEARINRASERNEEKALQVKETTNNERENSHLAGRSRGRGGFRSF 242
+ ++ E+ L HE++I S A + T N + + G +
Sbjct: 198 -TPPTLTEIHERLLNHESKILAVS-----SATVIPITANAVSHRNTTTTNNNNNGNRNNR 257
Query: 243 HGGRDNRGRWRSDGQRQFNEQKNVIQ-------CYYCKRYGHTKSNCWYKNQQMNFAAEN 302
+ R+N + Q N N Q C C GH+ C +Q +F +
Sbjct: 258 YDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRC---SQLQHFLSSV 317
Query: 303 EEEEEKLLMACMDT-------NPRKGDLWFVDSGCSNHMT---GTKSLFKELDETQKIKV 362
++ +P + W +DSG ++H+T SL + + V
Sbjct: 318 NSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMV 377
Query: 363 QLGNTKEMQVEGKGTVKVETGHGKIKQLDNVQFVPDLGYNLLSVGQLM-TRGHSVLFDDN 422
G+T + + G+ + T + L N+ +VP++ NL+SV +L G SV F
Sbjct: 378 ADGST--IPISHTGSTSLST-KSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPA 437
Query: 423 TCVITHKKSGHKVQIAMTSNKMFPLDISNMEDFALAASTKDDST--LWHLRYGHLHMNGL 482
+ + +G + T ++++ I++ + +L AS +T WH R GH + L
Sbjct: 438 SFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 497
Query: 483 KILRNKGMVFGLPRIDSTNLCEGCIYGKQTRKSFPVGKARRASHCLELIHADL-CGPMQT 542
+ + + L C C+ K + F ++ LE I++D+ P+ +
Sbjct: 498 NSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTI-NSTRPLEYIYSDVWSSPILS 557
Query: 543 NSLGGSIYFLLFIDDYSRMSWVYFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGE 602
+ Y+++F+D ++R +W+Y L+ KS+ + F FK ++EN+ I +D GGE
Sbjct: 558 HD--NYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGE 617
Query: 603 FISKEFNLFCEEEGIQRELTAPYTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAV 662
F++ + + GI + P+TPE NG++ERK+R IVE ++L +P +W A
Sbjct: 618 FVA--LWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAF 677
Query: 663 ATSVYLLNISPTKAVMNRTPYEAWHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKC 722
A +VYL+N PT + +P++ P+ LR+FGC Y RP + KLD+KS +C
Sbjct: 678 AVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQC 737
Query: 723 IFIGYCTQSKAYKLYNPISEKILVRRDVIFNENV--------------------SWDWS- 782
+F+GY AY + + ++ + R V F+EN S WS
Sbjct: 738 VFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSP 797
Query: 783 ------------------------------------------------------------ 842
Sbjct: 798 HTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAP 857
Query: 843 ------------KEQEQQKITVEVSPNEETRVN-SSASPNVSTATQNVSNSSSSASLNSD 902
+ Q Q + S N T + S + ++ST Q+ S+S S + S
Sbjct: 858 RQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASS 917
Query: 903 SSLEELSDET---PPKKYKSLTD--------------------IYASCQFALTV-----S 962
SS PP + + I + +++L V S
Sbjct: 918 SSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAES 977
Query: 963 DPMCYDEAAEREEWKKAMVEEMQSIEKNGTWEMV-DLPNEKNAINLKWVFKTKFAPDGSI 1022
+P +A + E W+ AM E+ + N TW++V P+ + +W+F K+ DGS+
Sbjct: 978 EPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSL 1037
Query: 1023 QKHKARLVAKGYAQQQGIDFEETFSPVARFETVRTILALAAELRWPVYQFDVKSAFLNGD 1082
++KARLVAKGY Q+ G+D+ ETFSPV + ++R +L +A + WP+ Q DV +AFL G
Sbjct: 1038 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1097
Query: 1083 LQEEVYVAQPEGFIKKDKETKVYKLRKALYGLKQAPRAWYSKIDGYFQKKGYMRSENEPT 1142
L ++VY++QP GFI KD+ V KLRKALYGLKQAPRAWY ++ Y G++ S ++ +
Sbjct: 1098 LTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTS 1157
Query: 1143 LYVKKEGKSDFIIICLYVDDIIYTSSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQ 1202
L+V + GKS + + +YVDDI+ T + +LL + F + D LHYFLG+E +
Sbjct: 1158 LFVLQRGKS-IVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKR 1217
Query: 1203 VEDGIFISQRKYAKDIMSKFGMLNCKPAATPMNINEKLQHDDGAEMTDARRFRSLVGGLI 1262
V G+ +SQR+Y D++++ M+ KP TPM + KL G ++TD +R +VG L
Sbjct: 1218 VPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQ 1277
Query: 1263 YLTHTRPDIAFPVGIISKFMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFT 1322
YL TRPDI++ V +S+FM P++ H A KR+LRY+AGT +GI+ K + L+ ++
Sbjct: 1278 YLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYS 1337
Query: 1323 DSDWAGSLDDRRSISANVFTLGSGAITWSSKKQATVALSTSEAEYVAATSAACQAIWLRR 1325
D+DWAG DD S + + LG I+WSSKKQ V S++EAEY + + + + W+
Sbjct: 1338 DADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICS 1397
BLAST of CmoCh03G003980 vs. ExPASy Swiss-Prot
Match:
P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)
HSP 1 Score: 185.7 bits (470), Expect = 3.5e-45
Identity = 98/225 (43.56%), Postives = 140/225 (62.22%), Query Frame = 0
Query: 1011 ICLYVDDIIYTSSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYA 1070
+ LYVDDI+ T SSN+LL+ Q+ S F M D+G +HYFLG+++ G+F+SQ KYA
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 1071 KDIMSKFGMLNCKPAATPMNINEKLQHD-DGAEMTDARRFRSLVGGLIYLTHTRPDIAFP 1130
+ I++ GML+CKP +TP+ + KL A+ D FRS+VG L YLT TRPDI++
Sbjct: 63 EQILNNAGMLDCKPMSTPLPL--KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 122
Query: 1131 VGIISKFMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRR 1190
V I+ + M P+ + KRVLRY+ GT+ +G++ K+S + F DSDWAG RR
Sbjct: 123 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 182
Query: 1191 SISANVFTLGSGAITWSSKKQATVALSTSEAEYVAATSAACQAIW 1235
S + LG I+WS+K+Q TV+ S++E EY A A + W
Sbjct: 183 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of CmoCh03G003980 vs. ExPASy TrEMBL
Match:
A0A438CQE1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2419 PE=4 SV=1)
HSP 1 Score: 1634.0 bits (4230), Expect = 0.0e+00
Identity = 826/1311 (63.01%), Postives = 1011/1311 (77.12%), Query Frame = 0
Query: 28 MKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKNDAKALFIIQQAVHETIFSRIAA 87
MKTL +SQ+LWDLVE+G+ P +E+ RL+E K D+KALF IQQAVHE+IFS+IAA
Sbjct: 1 MKTLFKSQDLWDLVENGY-----PYPDEEARLKENTKKDSKALFFIQQAVHESIFSKIAA 60
Query: 88 ATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMTNGESIADFLSRTMAIVSQMRT 147
ATT+K+AW+ L+ FQG SKVI VKLQSLRRDFETL M NGES+ DFLSR AIV+QMR+
Sbjct: 61 ATTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGESVQDFLSRVAAIVNQMRS 120
Query: 148 YGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILSVDELMGSLQAHEARINRASER 207
YGE I D+T+VAKVLRSLTPKFDHVVAAIEE+KDLS S DELMGSLQ+HE R++R ++
Sbjct: 121 YGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVRLSRTEDK 180
Query: 208 NEEKALQVK-ETTNNERENSHLAGRSRGRGGFRSFHGGRDNRGRWRSDGQRQFNEQKNVI 267
NEEKA K ET++ + GR GRGG GR RGR R D Q
Sbjct: 181 NEEKAFYTKGETSDQKNGGREATGRGCGRGGAH----GRGGRGRGRGDAQ---------- 240
Query: 268 QCYYCKRYGHTKSNCWYKNQQMNFA--AENEEEEEKLLMACMDTNPRKGDLWFVDSGCSN 327
+ CW K +Q A E EE++ KL MA + ++WF+DSGCSN
Sbjct: 241 ------------AECWKKERQEKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSN 300
Query: 328 HMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKGTVKVETGHGKIKQLDNVQFVPDLGYN 387
HMTG KSLFKELDE+ K+KV+LG+ K++QVEGKGTV V GHG +K L NV F+P L N
Sbjct: 301 HMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQN 360
Query: 388 LLSVGQLMTRGHSVLFDDNTCVITHKKSGH-KVQIAMTSNKMFPLDISNMEDFALAASTK 447
LLSVGQLM G+S+LF TCVI KKS V + M +NK+FPL++S++E AL
Sbjct: 361 LLSVGQLMVSGYSILFYGATCVIKDKKSDQIIVDVRMAANKLFPLEVSSIEKHALVVKET 420
Query: 448 DDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRIDSTNLCEGCIYGKQTRKSFPVGKARRA 507
+S LWHLRYGHL++ GLK+L K MVFGLP+IDS N+CEGCIYGKQ++K FP G++RRA
Sbjct: 421 SESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRA 480
Query: 508 SHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSRMSWVYFLQHKSETFQKFQMFKAMVE 567
S CLE+IHADLCGPMQT S GGS YFLLFIDD+SRMSWVYFLQ K+ETF+ F+ FKA VE
Sbjct: 481 SSCLEIIHADLCGPMQTASFGGSRYFLLFIDDHSRMSWVYFLQSKAETFETFKKFKAFVE 540
Query: 568 NQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQRELTAPYTPEQNGIAERKNRTIVEMAR 627
QSG+ IKVLRTDRGGEF+S +F +FCEEEG+ RELT PY+PEQ G+AERKNRT+VEMAR
Sbjct: 541 KQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQKGVAERKNRTVVEMAR 600
Query: 628 SMLQARRLPDQFWAEAVATSVYLLNISPTKAVMNRTPYEAWHRRKPSVSHLRIFGCVAYA 687
SM++A+ L + FWAE VAT+VYLLNISPTKAV+NRTPYEAW+ RKP VSHL++FG VAY
Sbjct: 601 SMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYT 660
Query: 688 LKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYNPISEKILVRRDVIFNENVSWDWSKEQE 747
L R KLDEKS KCIFIGYC+QSK YKLYNP+S KI+V R+V+F+E SW W ++
Sbjct: 661 LFNSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSED 720
Query: 748 QQKITVEVSPNEETRVNSSASPNVSTATQNVSNSSSSASLNSDSSLEELSDETPPKKYKS 807
VE+S E + P+V + + S S+ S SS + S+ETPP+K++S
Sbjct: 721 --GALVEISSESEVAQSEDQQPSVQIPASPIPSHSPSSPNLSSSSSSQSSEETPPRKFRS 780
Query: 808 LTDIYASCQFALTVSDPMCYDEAAEREEWKKAMVEEMQSIEKNGTWEMVDLPNEKNAINL 867
L DIY + Q L V+DP ++EA E+EEW AM EE+ +IEKN TWE+V+LP +KN I +
Sbjct: 781 LRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKNVIGV 840
Query: 868 KWVFKTKFAPDGSIQKHKARLVAKGYAQQQGIDFEETFSPVARFETVRTILALAAELRWP 927
KWVF+TK+ DGSIQKHKARLVAKGYAQQ G+D+++TFSPVARFETVRT+LALAA + W
Sbjct: 841 KWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWC 900
Query: 928 VYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDKETKVYKLRKALYGLKQAPRAWYSKIDGY 987
VYQFDVKS FLNG+L EEVYV+QPEGFI KE VY+L+KALYGLKQAPRAWYSKI+ Y
Sbjct: 901 VYQFDVKSTFLNGELVEEVYVSQPEGFIVPGKEEHVYRLKKALYGLKQAPRAWYSKIESY 960
Query: 988 FQKKGYMRSENEPTLYVKKEGKSDFIIICLYVDDIIYTSSSNSLLDKFKSQMMSEFEMSD 1047
F + G+ RS++EP LY+K++GK+D +IICLYVDD+IY SS+SL+++FK+ M +FEMSD
Sbjct: 961 FVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSD 1020
Query: 1048 MGLLHYFLGLEVYQVEDGIFISQRKYAKDIMSKFGMLNCKPAATPMNINEKLQHDDGAEM 1107
+GLLH+FLGLEV QVEDG+F+SQRKYA D++ KF MLN K ATPMN NEKLQ +DG E
Sbjct: 1021 LGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNYKVVATPMNSNEKLQAEDGTER 1080
Query: 1108 TDARRFRSLVGGLIYLTHTRPDIAFPVGIISKFMQHPSKVHYGAAKRVLRYIAGTMEYGI 1167
DARRFRSLVGGLIYLTHTRPDI F VG+IS+FM PSK H GAAKR+LRYIAGT ++ I
Sbjct: 1081 ADARRFRSLVGGLIYLTHTRPDITFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFRI 1140
Query: 1168 WYSKSSNFKLYGFTDSDWAGSLDDRRSISANVFTLGSGAITWSSKKQATVALSTSEAEYV 1227
WY FKL G+TDSDWAG L+DR+S S +F+LGSGA+ WSSKKQA ALS+SEAEY
Sbjct: 1141 WYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYT 1200
Query: 1228 AATSAACQAIWLRRMLADLQQEQKGATKIFCDNKATISMTKNPAFHSRTKHIELRHHYIR 1287
AATS+ACQA+WLRR+LAD+ QE + T I+CDNKA I+MTKNPA+H RTKH+++R H+IR
Sbjct: 1201 AATSSACQAVWLRRILADIYQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIR 1260
Query: 1288 DLVADEEIVLEYCNTDEQLADILTKALSKEKFCYFRRLLGICNFESRGSVE 1335
DLV + ++VL+YCNT+EQ+AD+LTKALS++K YFR LG+CNFESRGSVE
Sbjct: 1261 DLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCNFESRGSVE 1277
BLAST of CmoCh03G003980 vs. ExPASy TrEMBL
Match:
Q6L3N8 (Putative gag-pol polyprotein, identical OS=Solanum demissum OX=50514 GN=SDM1_42t00010 PE=4 SV=1)
HSP 1 Score: 1621.3 bits (4197), Expect = 0.0e+00
Identity = 822/1340 (61.34%), Postives = 1031/1340 (76.94%), Query Frame = 0
Query: 7 SSSAPLLPIFNGEKYEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKND 66
+SS PL+PIF GE Y++WS+KMKTL +SQELWD+VE G + ++RE +K D
Sbjct: 8 ASSQPLIPIFRGENYQFWSLKMKTLFKSQELWDIVETGIPE------GNANQMREHRKRD 67
Query: 67 AKALFIIQQAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMT 126
+KALF IQQA+ + IF RI+A TSKQAW IL++E+ GD KVI VKLQ+LRRDFETL M
Sbjct: 68 SKALFTIQQALDDEIFPRISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFETLFMN 127
Query: 127 NGESIADFLSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILS 186
ES+ +LSRT AIV++MR+YGEKI ++ +V+KVLRSLT KF+HVV AIEE+KDLS S
Sbjct: 128 ENESVQGYLSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTYS 187
Query: 187 VDELMGSLQAHEARINRASERNEEKALQVKETTNNERENSHLAGRSRGRGGFRSFHGGRD 246
DELM SL AHE R+NR+ E+ +EKA QVK + + + + AGR GRG FR G
Sbjct: 188 FDELMSSLLAHEDRLNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHGRGNFRGRGRGGS 247
Query: 247 NRGRWRSDGQRQFNEQKNVIQCYYCKRYGHTKSNCWYK----NQQMNFAAENEEEEEKLL 306
RGR + +F + K+ IQC YCK++GH + +CW K + NF +N EEE KL
Sbjct: 248 GRGR---NQVGEFRQYKSNIQCRYCKKFGHKEVDCWTKQKDEQKDANF-TQNVEEESKLF 307
Query: 307 MACMDTNPRKGDLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKGTVKV 366
MA +WF+DSGCSNHM+ +KSLF++LDE+QK +V+LG+ K++ +EGKGTV++
Sbjct: 308 MASSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEI 367
Query: 367 ETGHGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGHKV-QIAMT 426
+T G +K L +VQ+VP L +NLLSVGQLMT G+SV+F DN C I K+SG + ++ MT
Sbjct: 368 KTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMT 427
Query: 427 SNKMFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRIDSTNL 486
NKMFPLDISN+ + AL K+++ LWHLRYGHL++N LK+L K MV GLP I +L
Sbjct: 428 QNKMFPLDISNVGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELDL 487
Query: 487 CEGCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSRMSW 546
CEGCIYGKQTRKSFPVGK+ RA+ CLEL+HADLCGPM+ SLGGS YFL+F DDYSR SW
Sbjct: 488 CEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSW 547
Query: 547 VYFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQRELTA 606
VYFL+ KSETF+ F+ FKA VENQSG IK LRTDRGGEF+S +FNLFCEE GI+RELTA
Sbjct: 548 VYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTA 607
Query: 607 PYTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVMNRTPY 666
PYTPEQNG+AERKNRT+VEMARS L+A+ LPD FW EAVAT VY LNISPTK V N TP
Sbjct: 608 PYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPL 667
Query: 667 EAWHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYNPISEK 726
EAW+ +KP VSHLRIFGC+AYAL KLDEKS KCIF+GY QSKAY+LYNPIS K
Sbjct: 668 EAWNGKKPRVSHLRIFGCIAYAL--VNFHSKLDEKSTKCIFVGYSLQSKAYRLYNPISGK 727
Query: 727 ILVRRDVIFNENVSWDWSKEQEQQKITVEVSPNEETRVNSSASPNVSTATQNVSN--SSS 786
+++ R+V+FNE+VSW+++ I + + +EE+ V+ SPN S + +VS+ + S
Sbjct: 728 VIISRNVVFNEDVSWNFNSGNMMSNIQL-LPTDEESAVDFGNSPNSSPVSSSVSSPIAPS 787
Query: 787 SASLNSDSSLEEL------SDETPPKKYKSLTDIYASCQFALTVSDPMCYDEAAEREEWK 846
+ +SS+E + ++ P KY + + SCQFAL VSDP+CY+EA E+ EWK
Sbjct: 788 TTVAPDESSVEPIPLRRSTREKKPNPKYSN--TVNTSCQFALLVSDPICYEEAVEQSEWK 847
Query: 847 KAMVEEMQSIEKNGTWEMVDLPNEKNAINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQ 906
AM+EE+Q+IE+N TWE+VD P KN I LKWVF+TK+ DGSIQKHKARLVAKGY+QQQ
Sbjct: 848 NAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQ 907
Query: 907 GIDFEETFSPVARFETVRTILALAAELRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKK 966
G+DF+ETFSPVARFETVR +LALAA+L PVYQFDVKSAFLNGDL+EEVYV+QP+GF+
Sbjct: 908 GVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMIT 967
Query: 967 DKETKVYKLRKALYGLKQAPRAWYSKIDGYFQKKGYMRSENEPTLYVKKEGKSDFIIICL 1026
E KVYKLRKALYGLKQAPRAWYSKID +FQ G+ RS+NEPTLY+KK+G +F+++CL
Sbjct: 968 GNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCL 1027
Query: 1027 YVDDIIYTSSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDI 1086
YVDD+IY SS SL++ FKS MM FEMSD+GLL YFLGLEV Q +DGIFISQ+KYA+D+
Sbjct: 1028 YVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQKKYAEDL 1087
Query: 1087 MSKFGMLNCKPAATPMNINEKLQHDDGAEMTDARRFRSLVGGLIYLTHTRPDIAFPVGII 1146
+ KF M+NC+ A TPMNINEKLQ DG E + + FRSLVGGL YLTHTRPDIAF V ++
Sbjct: 1088 LKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVV 1147
Query: 1147 SKFMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRRSISA 1206
S+F+Q P+K H+GAAKRVLRY+AGT ++GIWYSK+ NF+L GFTDSD+AG LDDR+S S
Sbjct: 1148 SRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSG 1207
Query: 1207 NVFTLGSGAITWSSKKQATVALSTSEAEYVAATSAACQAIWLRRMLADLQQEQKGATKIF 1266
+ F+ GSG +TWSSKKQ TVALSTSEAEY AA+ AA QA+WLR++L D EQK +T+IF
Sbjct: 1208 SCFSFGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTEIF 1267
Query: 1267 CDNKATISMTKNPAFHSRTKHIELRHHYIRDLVADEEIVLEYCNTDEQLADILTKALSKE 1326
D+K+ I+M KNP+FH RTKHI++++H+IR LVAD IVL++C+T+EQ ADI TK+L +
Sbjct: 1268 SDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAADIFTKSLPQA 1327
Query: 1327 KFCYFRRLLGICNFESRGSV 1334
K YFR LG+C+FESRGSV
Sbjct: 1328 KHEYFRLQLGVCDFESRGSV 1332
BLAST of CmoCh03G003980 vs. ExPASy TrEMBL
Match:
A0A438C6S9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1623 PE=4 SV=1)
HSP 1 Score: 1604.0 bits (4152), Expect = 0.0e+00
Identity = 824/1339 (61.54%), Postives = 1012/1339 (75.58%), Query Frame = 0
Query: 7 SSSAPLLPIFNGEKYEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKND 66
S S P +PIF GE YE+WSIKMKTL +SQ+LWDLVE+G+ P +E+ RL+E K D
Sbjct: 10 SVSQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTKKD 69
Query: 67 AKALFIIQQAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMT 126
+KALF IQQAV E+IFS+IAAATT+K+ W+ L+ FQG SKVI VKLQSLRRDFETL M
Sbjct: 70 SKALFFIQQAVRESIFSKIAAATTAKEVWTTLKTTFQGSSKVITVKLQSLRRDFETLHMK 129
Query: 127 NGESIADFLSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILS 186
NGES+ DFLSR AIV+QMR+YGE I D+T+VAKVLRSLTPKFDHVVA IEE+KDLS S
Sbjct: 130 NGESMQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVATIEESKDLSTYS 189
Query: 187 VDELMGSLQAHEARINRASERNEEKALQVK-ETTNNERENSHLAGRSRGRGGFRSFHGGR 246
DELMGSLQ+HE R++R E+NEEKA K ET++ + GR RGRGG GR
Sbjct: 190 FDELMGSLQSHEVRLSRTEEKNEEKAFYTKGETSDQKNGGREATGRGRGRGGAH----GR 249
Query: 247 DNRGRWRSDG---QRQF---NEQKNVIQCYYCKRYGHTKSNCWYKNQQMNFA--AENEEE 306
RGR R D QRQ N K+ IQCYYCKR+GH ++ CW K +Q A E EE+
Sbjct: 250 GGRGRGRGDAQGDQRQLTEKNRNKSNIQCYYCKRFGHVQAECWKKERQEKQANYVEQEED 309
Query: 307 EEKLLMACMDTNPRKGDLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGK 366
+ KL MA + ++WF+DSGCSNHMTG KSLFKELDE+ K+KV+LG+ K++QVEGK
Sbjct: 310 QVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGK 369
Query: 367 GTVKVETGHGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGH-KV 426
GTV V GHG +K L NV F+P L NLLSVGQLM G+S+LFD TCVI KKS V
Sbjct: 370 GTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIV 429
Query: 427 QIAMTSNKMFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRI 486
+ M +NK+FPL++S++E AL +S LWHLRYGHL++ GLK+L K MVFGLP+I
Sbjct: 430 DVRMAANKLFPLEVSSIEKHALVVKGTSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI 489
Query: 487 DSTNLCEGCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDY 546
DS N+CEGCIYGKQ++K FP G++RRAS CLE+IHADLCGPMQT S GGS YFLLF DD+
Sbjct: 490 DSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDH 549
Query: 547 SRMSWVYFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQ 606
SRMSWVYFLQ K+ETF+ F+ FKA VE QSG+ IKVLRTDRGGEF+S +F +FCEEEG+
Sbjct: 550 SRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLH 609
Query: 607 RELTAPYTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVM 666
RELT P +PEQNG+AERKNRT+VEMARSM++A+ L + FWAE VAT+VYLLNISPTKAV+
Sbjct: 610 RELTTPCSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVL 669
Query: 667 NRTPYEAWHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYN 726
NRTPYEA C K K YKLYN
Sbjct: 670 NRTPYEA---------------C-------------------KVHLYWLLLLIKGYKLYN 729
Query: 727 PISEKILVRRDVIFNENVSWDWSKEQEQQKITVEVSPNEETRVNSSASPNVS-TATQNVS 786
P+S KI+V R+V+F+E SW W ++ VE+S E + P+V A+ S
Sbjct: 730 PVSGKIIVSRNVVFDEKASWTWRVSED--GALVEISSESEVARSEDRQPSVQIPASPTPS 789
Query: 787 NSSSSASLNSDSSLEELSDETPPKKYKSLTDIYASCQFALTVSDPMCYDEAAEREEWKKA 846
+S SS +L+S SS + S+ETP +K++SL DIY + Q L V+DP ++E E+EEW A
Sbjct: 790 HSPSSPNLSSSSS-SQSSEETPLRKFRSLRDIYETTQ-VLFVADPTTFEEVVEKEEWCSA 849
Query: 847 MVEEMQSIEKNGTWEMVDLPNEKNAINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQGI 906
M EE+ +IEKN WE+V+LP +KN I +KWVF+TK+ DGSIQKHKARLVAKGYAQQ G+
Sbjct: 850 MKEEIAAIEKNEIWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGV 909
Query: 907 DFEETFSPVARFETVRTILALAAELRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDK 966
D+++TFSPVARFETVRT+LALAA + W VYQFDVKSAFLNG+L EEVYV+QPEGFI K
Sbjct: 910 DYDDTFSPVARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYVSQPEGFIVPGK 969
Query: 967 ETKVYKLRKALYGLKQAPRAWYSKIDGYFQKKGYMRSENEPTLYVKKEGKSDFIIICLYV 1026
E VY+L+KALYGLKQAPRAWYSKID YF + G+ RS++EP +Y+K++GK+D +IICLYV
Sbjct: 970 EEHVYRLKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNIYLKRQGKNDLLIICLYV 1029
Query: 1027 DDIIYTSSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDIMS 1086
DD+IY SS+ L+++FK+ M +FEMSD+GLLH+FLGLEV QVEDG+F+SQRKY D++
Sbjct: 1030 DDMIYMGSSSFLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYVVDLLK 1089
Query: 1087 KFGMLNCKPAATPMNINEKLQHDDGAEMTDARRFRSLVGGLIYLTHTRPDIAFPVGIISK 1146
KF MLNCK AT MN NEKLQ +DG E DARRFRSLVGGLIYLTHTRPDIAF VG+IS+
Sbjct: 1090 KFNMLNCKVVATLMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFSVGVISR 1149
Query: 1147 FMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRRSISANV 1206
FM +PSK H GAAKR+LRYIAGT ++GIWY FKL G+TDSDWAG L DR++ S +
Sbjct: 1150 FMHYPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLKDRKNTSGYM 1209
Query: 1207 FTLGSGAITWSSKKQATVALSTSEAEYVAATSAACQAIWLRRMLADLQQEQKGATKIFCD 1266
F+LGSGA+ WSSKKQA +ALS+SEAEY ATS+ACQA+WLRR+LAD+ QE + T I+CD
Sbjct: 1210 FSLGSGAVCWSSKKQAVIALSSSEAEYTVATSSACQAVWLRRILADINQEHEEPTVIYCD 1269
Query: 1267 NKATISMTKNPAFHSRTKHIELRHHYIRDLVADEEIVLEYCNTDEQLADILTKALSKEKF 1326
NKA I+MTKNPA+H RTKH+++R H+IRDLV + ++VL+YCNT+EQ+AD+LTKALS++K
Sbjct: 1270 NKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKH 1301
Query: 1327 CYFRRLLGICNFESRGSVE 1335
YFR LG+CNFESRGSVE
Sbjct: 1330 VYFRSKLGVCNFESRGSVE 1301
BLAST of CmoCh03G003980 vs. ExPASy TrEMBL
Match:
A0A438G6H0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2082 PE=4 SV=1)
HSP 1 Score: 1593.9 bits (4126), Expect = 0.0e+00
Identity = 816/1333 (61.22%), Postives = 1001/1333 (75.09%), Query Frame = 0
Query: 7 SSSAPLLPIFNGEKYEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKND 66
S S P +PIF GE YE+WSIKMKTL +SQ+LWDLVE+G+ P +E+ RL+E K D
Sbjct: 10 SVSQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTKKD 69
Query: 67 AKALFIIQQAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMT 126
+KALF IQQA G SKVI VKLQSLRRDFETL M
Sbjct: 70 SKALFFIQQA---------------------------GSSKVITVKLQSLRRDFETLHMK 129
Query: 127 NGESIADFLSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILS 186
NGES+ DFLSR IV+QMR+YGE I D+T+VAKVLRSLTPKFDHVVAAIEE+KDLS S
Sbjct: 130 NGESVQDFLSRVATIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYS 189
Query: 187 VDELMGSLQAHEARINRASERNEEKALQVK-ETTNNERENSHLAGRSRGRGGFRSFHGGR 246
DELMGSLQ+HE R++R E+NEEKA K ET++ + E GR RGRGG GR
Sbjct: 190 FDELMGSLQSHEVRLSRTEEKNEEKAFYTKGETSDQKNEGREATGRGRGRGGAH----GR 249
Query: 247 DNRGRWRSDGQRQFNEQKNVIQCYYCKRYGHTKSNCWYKNQQMNFA--AENEEEEEKLLM 306
RGR R++ CW K +Q A E EE++ KL M
Sbjct: 250 GGRGRGRAE--------------------------CWKKERQEKQANYVEQEEDQVKLFM 309
Query: 307 ACMDTNPRKGDLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKGTVKVE 366
A + ++WF+DSGCSNHMTG KSLFKELDE+ K+KV+LG+ K++QVEGKG V V
Sbjct: 310 AYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGIVAVN 369
Query: 367 TGHGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGH-KVQIAMTS 426
GHG +K L NV F+P L NLLSV QLM G+S+LFD TCVI KKS V + M +
Sbjct: 370 NGHGNVKLLYNVYFIPSLTQNLLSVRQLMVSGYSILFDGATCVIKDKKSDQIIVDVRMAA 429
Query: 427 NKMFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRIDSTNLC 486
NK+FPL++S++E AL +S LWHLRYGHL++ GLK+L K MVFGLP+IDS N+C
Sbjct: 430 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVC 489
Query: 487 EGCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSRMSWV 546
EGCIYGKQ++K FP G++RRAS CLE+IHADLCGPMQT S GG+ YFLLF DD+S+MSWV
Sbjct: 490 EGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGNRYFLLFTDDHSKMSWV 549
Query: 547 YFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQRELTAP 606
YFLQ K+ETF+ F+ FKA V QSG+ IKVLRTDRGGEF+S +F +FCEEEG+ RELT
Sbjct: 550 YFLQSKAETFETFKKFKAFVGKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTS 609
Query: 607 YTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVMNRTPYE 666
Y+PEQNG+AERKNRT+VE+ARSM++A+ L + FWAE VAT+VYLLNIS TKAV+NR PYE
Sbjct: 610 YSPEQNGVAERKNRTVVEIARSMMKAKNLSNHFWAEGVATAVYLLNISQTKAVLNRIPYE 669
Query: 667 AWHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYNPISEKI 726
AW+ RKP VSHL++F VAY L KLDEKS KCIFIGYC+QSK YKLYNP+S KI
Sbjct: 670 AWYGRKPWVSHLKVFCSVAYTLIDSHNCSKLDEKSAKCIFIGYCSQSKGYKLYNPVSGKI 729
Query: 727 LVRRDVIFNENVSWDWSKEQEQQKITVEVSPNEETRVNSSASPNVS-TATQNVSNSSSSA 786
+V R+V+F+E SW W ++ VE+S E + P+V A+ S+S SS
Sbjct: 730 IVSRNVVFDEKASWTWRVSED--GALVEISSESEVAQSEDQQPSVQIPASPTPSHSPSSP 789
Query: 787 SLNSDSSLEELSDETPPKKYKSLTDIYASCQFALTVSDPMCYDEAAEREEWKKAMVEEMQ 846
+L+S SS + S+E PP+K++SL DIY + Q L V+DP ++EA E+EEW AM EE+
Sbjct: 790 NLSSSSS-SQSSEEAPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIA 849
Query: 847 SIEKNGTWEMVDLPNEKNAINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQGIDFEETF 906
+IEKN TWE+V+LP +KN I +KWVF+TK+ DGSIQKHKARLVAKGYAQQ G+D+++TF
Sbjct: 850 AIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTF 909
Query: 907 SPVARFETVRTILALAAELRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDKETKVYK 966
SPVARFET+RT+LALAA + W VYQFDVKSAFLNG+L EEVYV+QPEGFI KE VY+
Sbjct: 910 SPVARFETIRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYVSQPEGFIVPGKEEHVYR 969
Query: 967 LRKALYGLKQAPRAWYSKIDGYFQKKGYMRSENEPTLYVKKEGKSDFIIICLYVDDIIYT 1026
L+KALYGLKQAPRAWYSKID YF + G+ RS++EP LY+K++GK+D +IICLYVDD+IY
Sbjct: 970 LKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYM 1029
Query: 1027 SSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDIMSKFGMLN 1086
SS+SL+++FK+ M +FEMSD+GLLH+FLGLEV QVEDG+F+SQRKYA D++ KF MLN
Sbjct: 1030 GSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLN 1089
Query: 1087 CKPAATPMNINEKLQHDDGAEMTDARRFRSLVGGLIYLTHTRPDIAFPVGIISKFMQHPS 1146
CK ATPMN NEKLQ +DG E DAR FRSLVGGLIYLTHTRPDIAF VG+IS+FM PS
Sbjct: 1090 CKVVATPMNSNEKLQAEDGTERDDARMFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPS 1149
Query: 1147 KVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRRSISANVFTLGSG 1206
K H GAAKR+LRYIAGT ++GIWY FKL G+TDSDWAG L+DR+S S +F+LGSG
Sbjct: 1150 KQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSG 1209
Query: 1207 AITWSSKKQATVALSTSEAEYVAATSAACQAIWLRRMLADLQQEQKGATKIFCDNKATIS 1266
A+ WSSKKQA ALS+SEAEY AATS+ACQA+WLRR+LAD+ QE + T I+CDNKA I+
Sbjct: 1210 AVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIA 1269
Query: 1267 MTKNPAFHSRTKHIELRHHYIRDLVADEEIVLEYCNTDEQLADILTKALSKEKFCYFRRL 1326
MTKNP +H RTKH+++R H+IRDLV + ++VL+YCNT+EQ+AD+LTK LS++K YFR
Sbjct: 1270 MTKNPTYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKTLSRDKHVYFRSK 1276
Query: 1327 LGICNFESRGSVE 1335
LG+CNFESRGSVE
Sbjct: 1330 LGVCNFESRGSVE 1276
BLAST of CmoCh03G003980 vs. ExPASy TrEMBL
Match:
A5AHH2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032906 PE=4 SV=1)
HSP 1 Score: 1578.9 bits (4087), Expect = 0.0e+00
Identity = 805/1331 (60.48%), Postives = 993/1331 (74.61%), Query Frame = 0
Query: 15 IFNGEKYEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKNDAKALFIIQ 74
+ GE YE+WSIKMKTL +SQ+LWDLVE+G+ P +E+ RL+E K D+KALF IQ
Sbjct: 132 VVEGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTKKDSKALFFIQ 191
Query: 75 QAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMTNGESIADF 134
QA+HE+IFS+IA ATT+K+AW+ L+ FQG SKVI VKLQSLRRDFETL M NGES DF
Sbjct: 192 QAIHESIFSKIAVATTAKEAWTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGESXQDF 251
Query: 135 LSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILSVDELMGSL 194
LSR AIV+QMR+YGE I D+T+VAKVLRSLTPKFDHVVA IEE+KDLS S DELMGSL
Sbjct: 252 LSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAXIEESKDLSTYSFDELMGSL 311
Query: 195 QAHEARINRASERNEEKALQVK-ETTNNERENSHLAGRSRGRGGFRSFHGGRDNRGRWRS 254
Q+HE R++ ++NEEK K ET++ + GR RGRGG GR RGR R
Sbjct: 312 QSHEVRLSXTEDKNEEKXFYTKGETSDXKNGGREXTGRGRGRGGAH----GRGGRGRGRG 371
Query: 255 DG---QRQFNEQ---KNVIQCYYCKRYGHTKSNCWYKNQQMNFA--AENEEEEEKLLMAC 314
D QRQ E+ K+ I CYYCKR+GH ++ CW K +Q A E EE++ KL MA
Sbjct: 372 DAQGDQRQSTEKSRNKSNIXCYYCKRFGHVQAECWKKERQEKQANYVEQEEDQVKLFMAY 431
Query: 315 MDTNPRKGDLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKGTVKVETG 374
+ ++WF+DSGCSNHMTG KSLFKELDE+ K+ V+LG+ ++QVEGKGTV V G
Sbjct: 432 NEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLXVKLGDDXQVQVEGKGTVAVNNG 491
Query: 375 HGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGHK--VQIAMTSN 434
HG +K L NV F+P L L+ C T+ K + V + M +N
Sbjct: 492 HGNVKLLYNVYFIPSLTEKLVK-----------------CGATYDKKSDQIIVDVRMAAN 551
Query: 435 KMFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRIDSTNLCE 494
K+FPL++S++E AL +S LWHLRYGHL++ GLK+L K MVF LP+IDS N+CE
Sbjct: 552 KLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFELPKIDSVNVCE 611
Query: 495 GCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSRMSWVY 554
GCIYGKQ++K FP G++RRAS CLE+IHADLCGPMQT S GGS YFLLF DD+SRMSWVY
Sbjct: 612 GCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVY 671
Query: 555 FLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQRELTAPY 614
FLQ K+ETF+ F+ FKA VE QSG+ IKVLRTDR GEF+S +F +FCEEEG+ RELT PY
Sbjct: 672 FLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRXGEFLSNDFKVFCEEEGLHRELTTPY 731
Query: 615 TPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVMNRTPYEA 674
+PEQNG+AERKNRT+VEMARSM+ A+ L + FWAE VAT+VYLLNISPTKAV+NRTPYEA
Sbjct: 732 SPEQNGVAERKNRTVVEMARSMMXAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEA 791
Query: 675 WHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYNPISEKIL 734
W+ RKP VSHL++FG VAY L R KLDEKS KCIFIGYC+QSK YKLYNP+S KI+
Sbjct: 792 WYGRKPWVSHLKVFGSVAYTLXBSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKII 851
Query: 735 VRRDVIFNENVSWDWSKEQEQQKITVEVSPNEETRVNSSASPNVSTATQNVSNSSSSASL 794
V R+V+F+E S W ++ VE+S E + P+V + S S+
Sbjct: 852 VSRNVVFDEKASXTWRVSED--GALVEISSESEMAQSEDQQPSVQIPXSPTPSHSPSSPN 911
Query: 795 NSDSSLEELSDETPPKKYKSLTDIYASCQFALTVSDPMCYDEAAEREEWKKAMVEEMQSI 854
S SS + S+ETPP+K++SL DIY + Q L V+DP ++EA E+EEW AM EE+ +I
Sbjct: 912 LSXSSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIAAI 971
Query: 855 EKNGTWEMVDLPNEKNAINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQGIDFEETFSP 914
EKN TWE+V+LP +KN I +KWVF+TK+ DGSIQKHKARLVAKGYAQQ G+D+++TFSP
Sbjct: 972 EKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSP 1031
Query: 915 VARFETVRTILALAAELRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDKETKVYKLR 974
VARFETVRT+LALAA + W VYQFDVKSAFLNG+L EEVY +QPEGFI DKE VY+L+
Sbjct: 1032 VARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLK 1091
Query: 975 KALYGLKQAPRAWYSKIDGYFQKKGYMRSENEPTLYVKKEGKSDFIIICLYVDDIIYTSS 1034
ALYGLKQAPRAWYSKID YF + G+ +S++EP LY+K++GK+D +IICLYVDD+IY S
Sbjct: 1092 XALYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGS 1151
Query: 1035 SNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDIMSKFGMLNCK 1094
S+SL+++FK+ M +FEMSD+GLLH+FLGLEV QVEDG+F+SQRKYA D++ KF MLNCK
Sbjct: 1152 SSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCK 1211
Query: 1095 PAATPMNINEKLQHDDGAEMTDARRFRSLVGGLIYLTHTRPDIAFPVGIISKFMQHPSKV 1154
A PMN NEKLQ +DG E DARRFRSLVGGLIYLTHTRPDIAF VG+IS+FM PSK
Sbjct: 1212 VVAIPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQ 1271
Query: 1155 HYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRRSISANVFTLGSGAI 1214
H GA KR+LRYIAGT ++ IW FKL G+TDSDWAG L+DR+S S +F+LGS
Sbjct: 1272 HLGATKRLLRYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGS--- 1331
Query: 1215 TWSSKKQATVALSTSEAEYVAATSAACQAIWLRRMLADLQQEQKGATKIFCDNKATISMT 1274
AEY ATS+ACQA+WLRR+LAD+ QE + T I+CDNKA I+MT
Sbjct: 1332 ----------------AEYTVATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMT 1391
Query: 1275 KNPAFHSRTKHIELRHHYIRDLVADEEIVLEYCNTDEQLADILTKALSKEKFCYFRRLLG 1334
KNPA+H RTKH+++R H+IRDLV + ++VL+YCNT+EQ+AD+LTKALS++K YFR LG
Sbjct: 1392 KNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLG 1414
BLAST of CmoCh03G003980 vs. NCBI nr
Match:
RVW25417.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 1634.0 bits (4230), Expect = 0.0e+00
Identity = 826/1311 (63.01%), Postives = 1011/1311 (77.12%), Query Frame = 0
Query: 28 MKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKNDAKALFIIQQAVHETIFSRIAA 87
MKTL +SQ+LWDLVE+G+ P +E+ RL+E K D+KALF IQQAVHE+IFS+IAA
Sbjct: 1 MKTLFKSQDLWDLVENGY-----PYPDEEARLKENTKKDSKALFFIQQAVHESIFSKIAA 60
Query: 88 ATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMTNGESIADFLSRTMAIVSQMRT 147
ATT+K+AW+ L+ FQG SKVI VKLQSLRRDFETL M NGES+ DFLSR AIV+QMR+
Sbjct: 61 ATTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGESVQDFLSRVAAIVNQMRS 120
Query: 148 YGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILSVDELMGSLQAHEARINRASER 207
YGE I D+T+VAKVLRSLTPKFDHVVAAIEE+KDLS S DELMGSLQ+HE R++R ++
Sbjct: 121 YGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVRLSRTEDK 180
Query: 208 NEEKALQVK-ETTNNERENSHLAGRSRGRGGFRSFHGGRDNRGRWRSDGQRQFNEQKNVI 267
NEEKA K ET++ + GR GRGG GR RGR R D Q
Sbjct: 181 NEEKAFYTKGETSDQKNGGREATGRGCGRGGAH----GRGGRGRGRGDAQ---------- 240
Query: 268 QCYYCKRYGHTKSNCWYKNQQMNFA--AENEEEEEKLLMACMDTNPRKGDLWFVDSGCSN 327
+ CW K +Q A E EE++ KL MA + ++WF+DSGCSN
Sbjct: 241 ------------AECWKKERQEKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSN 300
Query: 328 HMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKGTVKVETGHGKIKQLDNVQFVPDLGYN 387
HMTG KSLFKELDE+ K+KV+LG+ K++QVEGKGTV V GHG +K L NV F+P L N
Sbjct: 301 HMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQN 360
Query: 388 LLSVGQLMTRGHSVLFDDNTCVITHKKSGH-KVQIAMTSNKMFPLDISNMEDFALAASTK 447
LLSVGQLM G+S+LF TCVI KKS V + M +NK+FPL++S++E AL
Sbjct: 361 LLSVGQLMVSGYSILFYGATCVIKDKKSDQIIVDVRMAANKLFPLEVSSIEKHALVVKET 420
Query: 448 DDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRIDSTNLCEGCIYGKQTRKSFPVGKARRA 507
+S LWHLRYGHL++ GLK+L K MVFGLP+IDS N+CEGCIYGKQ++K FP G++RRA
Sbjct: 421 SESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRA 480
Query: 508 SHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSRMSWVYFLQHKSETFQKFQMFKAMVE 567
S CLE+IHADLCGPMQT S GGS YFLLFIDD+SRMSWVYFLQ K+ETF+ F+ FKA VE
Sbjct: 481 SSCLEIIHADLCGPMQTASFGGSRYFLLFIDDHSRMSWVYFLQSKAETFETFKKFKAFVE 540
Query: 568 NQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQRELTAPYTPEQNGIAERKNRTIVEMAR 627
QSG+ IKVLRTDRGGEF+S +F +FCEEEG+ RELT PY+PEQ G+AERKNRT+VEMAR
Sbjct: 541 KQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQKGVAERKNRTVVEMAR 600
Query: 628 SMLQARRLPDQFWAEAVATSVYLLNISPTKAVMNRTPYEAWHRRKPSVSHLRIFGCVAYA 687
SM++A+ L + FWAE VAT+VYLLNISPTKAV+NRTPYEAW+ RKP VSHL++FG VAY
Sbjct: 601 SMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYT 660
Query: 688 LKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYNPISEKILVRRDVIFNENVSWDWSKEQE 747
L R KLDEKS KCIFIGYC+QSK YKLYNP+S KI+V R+V+F+E SW W ++
Sbjct: 661 LFNSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSED 720
Query: 748 QQKITVEVSPNEETRVNSSASPNVSTATQNVSNSSSSASLNSDSSLEELSDETPPKKYKS 807
VE+S E + P+V + + S S+ S SS + S+ETPP+K++S
Sbjct: 721 --GALVEISSESEVAQSEDQQPSVQIPASPIPSHSPSSPNLSSSSSSQSSEETPPRKFRS 780
Query: 808 LTDIYASCQFALTVSDPMCYDEAAEREEWKKAMVEEMQSIEKNGTWEMVDLPNEKNAINL 867
L DIY + Q L V+DP ++EA E+EEW AM EE+ +IEKN TWE+V+LP +KN I +
Sbjct: 781 LRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKNVIGV 840
Query: 868 KWVFKTKFAPDGSIQKHKARLVAKGYAQQQGIDFEETFSPVARFETVRTILALAAELRWP 927
KWVF+TK+ DGSIQKHKARLVAKGYAQQ G+D+++TFSPVARFETVRT+LALAA + W
Sbjct: 841 KWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWC 900
Query: 928 VYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDKETKVYKLRKALYGLKQAPRAWYSKIDGY 987
VYQFDVKS FLNG+L EEVYV+QPEGFI KE VY+L+KALYGLKQAPRAWYSKI+ Y
Sbjct: 901 VYQFDVKSTFLNGELVEEVYVSQPEGFIVPGKEEHVYRLKKALYGLKQAPRAWYSKIESY 960
Query: 988 FQKKGYMRSENEPTLYVKKEGKSDFIIICLYVDDIIYTSSSNSLLDKFKSQMMSEFEMSD 1047
F + G+ RS++EP LY+K++GK+D +IICLYVDD+IY SS+SL+++FK+ M +FEMSD
Sbjct: 961 FVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSD 1020
Query: 1048 MGLLHYFLGLEVYQVEDGIFISQRKYAKDIMSKFGMLNCKPAATPMNINEKLQHDDGAEM 1107
+GLLH+FLGLEV QVEDG+F+SQRKYA D++ KF MLN K ATPMN NEKLQ +DG E
Sbjct: 1021 LGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNYKVVATPMNSNEKLQAEDGTER 1080
Query: 1108 TDARRFRSLVGGLIYLTHTRPDIAFPVGIISKFMQHPSKVHYGAAKRVLRYIAGTMEYGI 1167
DARRFRSLVGGLIYLTHTRPDI F VG+IS+FM PSK H GAAKR+LRYIAGT ++ I
Sbjct: 1081 ADARRFRSLVGGLIYLTHTRPDITFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFRI 1140
Query: 1168 WYSKSSNFKLYGFTDSDWAGSLDDRRSISANVFTLGSGAITWSSKKQATVALSTSEAEYV 1227
WY FKL G+TDSDWAG L+DR+S S +F+LGSGA+ WSSKKQA ALS+SEAEY
Sbjct: 1141 WYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYT 1200
Query: 1228 AATSAACQAIWLRRMLADLQQEQKGATKIFCDNKATISMTKNPAFHSRTKHIELRHHYIR 1287
AATS+ACQA+WLRR+LAD+ QE + T I+CDNKA I+MTKNPA+H RTKH+++R H+IR
Sbjct: 1201 AATSSACQAVWLRRILADIYQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIR 1260
Query: 1288 DLVADEEIVLEYCNTDEQLADILTKALSKEKFCYFRRLLGICNFESRGSVE 1335
DLV + ++VL+YCNT+EQ+AD+LTKALS++K YFR LG+CNFESRGSVE
Sbjct: 1261 DLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCNFESRGSVE 1277
BLAST of CmoCh03G003980 vs. NCBI nr
Match:
AAT38758.1 (Putative gag-pol polyprotein, identical [Solanum demissum])
HSP 1 Score: 1621.3 bits (4197), Expect = 0.0e+00
Identity = 822/1340 (61.34%), Postives = 1031/1340 (76.94%), Query Frame = 0
Query: 7 SSSAPLLPIFNGEKYEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKND 66
+SS PL+PIF GE Y++WS+KMKTL +SQELWD+VE G + ++RE +K D
Sbjct: 8 ASSQPLIPIFRGENYQFWSLKMKTLFKSQELWDIVETGIPE------GNANQMREHRKRD 67
Query: 67 AKALFIIQQAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMT 126
+KALF IQQA+ + IF RI+A TSKQAW IL++E+ GD KVI VKLQ+LRRDFETL M
Sbjct: 68 SKALFTIQQALDDEIFPRISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFETLFMN 127
Query: 127 NGESIADFLSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILS 186
ES+ +LSRT AIV++MR+YGEKI ++ +V+KVLRSLT KF+HVV AIEE+KDLS S
Sbjct: 128 ENESVQGYLSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTYS 187
Query: 187 VDELMGSLQAHEARINRASERNEEKALQVKETTNNERENSHLAGRSRGRGGFRSFHGGRD 246
DELM SL AHE R+NR+ E+ +EKA QVK + + + + AGR GRG FR G
Sbjct: 188 FDELMSSLLAHEDRLNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHGRGNFRGRGRGGS 247
Query: 247 NRGRWRSDGQRQFNEQKNVIQCYYCKRYGHTKSNCWYK----NQQMNFAAENEEEEEKLL 306
RGR + +F + K+ IQC YCK++GH + +CW K + NF +N EEE KL
Sbjct: 248 GRGR---NQVGEFRQYKSNIQCRYCKKFGHKEVDCWTKQKDEQKDANF-TQNVEEESKLF 307
Query: 307 MACMDTNPRKGDLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKGTVKV 366
MA +WF+DSGCSNHM+ +KSLF++LDE+QK +V+LG+ K++ +EGKGTV++
Sbjct: 308 MASSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEI 367
Query: 367 ETGHGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGHKV-QIAMT 426
+T G +K L +VQ+VP L +NLLSVGQLMT G+SV+F DN C I K+SG + ++ MT
Sbjct: 368 KTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMT 427
Query: 427 SNKMFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRIDSTNL 486
NKMFPLDISN+ + AL K+++ LWHLRYGHL++N LK+L K MV GLP I +L
Sbjct: 428 QNKMFPLDISNVGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELDL 487
Query: 487 CEGCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSRMSW 546
CEGCIYGKQTRKSFPVGK+ RA+ CLEL+HADLCGPM+ SLGGS YFL+F DDYSR SW
Sbjct: 488 CEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSW 547
Query: 547 VYFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQRELTA 606
VYFL+ KSETF+ F+ FKA VENQSG IK LRTDRGGEF+S +FNLFCEE GI+RELTA
Sbjct: 548 VYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTA 607
Query: 607 PYTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVMNRTPY 666
PYTPEQNG+AERKNRT+VEMARS L+A+ LPD FW EAVAT VY LNISPTK V N TP
Sbjct: 608 PYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPL 667
Query: 667 EAWHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYNPISEK 726
EAW+ +KP VSHLRIFGC+AYAL KLDEKS KCIF+GY QSKAY+LYNPIS K
Sbjct: 668 EAWNGKKPRVSHLRIFGCIAYAL--VNFHSKLDEKSTKCIFVGYSLQSKAYRLYNPISGK 727
Query: 727 ILVRRDVIFNENVSWDWSKEQEQQKITVEVSPNEETRVNSSASPNVSTATQNVSN--SSS 786
+++ R+V+FNE+VSW+++ I + + +EE+ V+ SPN S + +VS+ + S
Sbjct: 728 VIISRNVVFNEDVSWNFNSGNMMSNIQL-LPTDEESAVDFGNSPNSSPVSSSVSSPIAPS 787
Query: 787 SASLNSDSSLEEL------SDETPPKKYKSLTDIYASCQFALTVSDPMCYDEAAEREEWK 846
+ +SS+E + ++ P KY + + SCQFAL VSDP+CY+EA E+ EWK
Sbjct: 788 TTVAPDESSVEPIPLRRSTREKKPNPKYSN--TVNTSCQFALLVSDPICYEEAVEQSEWK 847
Query: 847 KAMVEEMQSIEKNGTWEMVDLPNEKNAINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQ 906
AM+EE+Q+IE+N TWE+VD P KN I LKWVF+TK+ DGSIQKHKARLVAKGY+QQQ
Sbjct: 848 NAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQ 907
Query: 907 GIDFEETFSPVARFETVRTILALAAELRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKK 966
G+DF+ETFSPVARFETVR +LALAA+L PVYQFDVKSAFLNGDL+EEVYV+QP+GF+
Sbjct: 908 GVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMIT 967
Query: 967 DKETKVYKLRKALYGLKQAPRAWYSKIDGYFQKKGYMRSENEPTLYVKKEGKSDFIIICL 1026
E KVYKLRKALYGLKQAPRAWYSKID +FQ G+ RS+NEPTLY+KK+G +F+++CL
Sbjct: 968 GNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCL 1027
Query: 1027 YVDDIIYTSSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDI 1086
YVDD+IY SS SL++ FKS MM FEMSD+GLL YFLGLEV Q +DGIFISQ+KYA+D+
Sbjct: 1028 YVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQKKYAEDL 1087
Query: 1087 MSKFGMLNCKPAATPMNINEKLQHDDGAEMTDARRFRSLVGGLIYLTHTRPDIAFPVGII 1146
+ KF M+NC+ A TPMNINEKLQ DG E + + FRSLVGGL YLTHTRPDIAF V ++
Sbjct: 1088 LKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVV 1147
Query: 1147 SKFMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRRSISA 1206
S+F+Q P+K H+GAAKRVLRY+AGT ++GIWYSK+ NF+L GFTDSD+AG LDDR+S S
Sbjct: 1148 SRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSG 1207
Query: 1207 NVFTLGSGAITWSSKKQATVALSTSEAEYVAATSAACQAIWLRRMLADLQQEQKGATKIF 1266
+ F+ GSG +TWSSKKQ TVALSTSEAEY AA+ AA QA+WLR++L D EQK +T+IF
Sbjct: 1208 SCFSFGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTEIF 1267
Query: 1267 CDNKATISMTKNPAFHSRTKHIELRHHYIRDLVADEEIVLEYCNTDEQLADILTKALSKE 1326
D+K+ I+M KNP+FH RTKHI++++H+IR LVAD IVL++C+T+EQ ADI TK+L +
Sbjct: 1268 SDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAADIFTKSLPQA 1327
Query: 1327 KFCYFRRLLGICNFESRGSV 1334
K YFR LG+C+FESRGSV
Sbjct: 1328 KHEYFRLQLGVCDFESRGSV 1332
BLAST of CmoCh03G003980 vs. NCBI nr
Match:
RVW18954.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 1604.0 bits (4152), Expect = 0.0e+00
Identity = 824/1339 (61.54%), Postives = 1012/1339 (75.58%), Query Frame = 0
Query: 7 SSSAPLLPIFNGEKYEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKND 66
S S P +PIF GE YE+WSIKMKTL +SQ+LWDLVE+G+ P +E+ RL+E K D
Sbjct: 10 SVSQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTKKD 69
Query: 67 AKALFIIQQAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMT 126
+KALF IQQAV E+IFS+IAAATT+K+ W+ L+ FQG SKVI VKLQSLRRDFETL M
Sbjct: 70 SKALFFIQQAVRESIFSKIAAATTAKEVWTTLKTTFQGSSKVITVKLQSLRRDFETLHMK 129
Query: 127 NGESIADFLSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILS 186
NGES+ DFLSR AIV+QMR+YGE I D+T+VAKVLRSLTPKFDHVVA IEE+KDLS S
Sbjct: 130 NGESMQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVATIEESKDLSTYS 189
Query: 187 VDELMGSLQAHEARINRASERNEEKALQVK-ETTNNERENSHLAGRSRGRGGFRSFHGGR 246
DELMGSLQ+HE R++R E+NEEKA K ET++ + GR RGRGG GR
Sbjct: 190 FDELMGSLQSHEVRLSRTEEKNEEKAFYTKGETSDQKNGGREATGRGRGRGGAH----GR 249
Query: 247 DNRGRWRSDG---QRQF---NEQKNVIQCYYCKRYGHTKSNCWYKNQQMNFA--AENEEE 306
RGR R D QRQ N K+ IQCYYCKR+GH ++ CW K +Q A E EE+
Sbjct: 250 GGRGRGRGDAQGDQRQLTEKNRNKSNIQCYYCKRFGHVQAECWKKERQEKQANYVEQEED 309
Query: 307 EEKLLMACMDTNPRKGDLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGK 366
+ KL MA + ++WF+DSGCSNHMTG KSLFKELDE+ K+KV+LG+ K++QVEGK
Sbjct: 310 QVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGK 369
Query: 367 GTVKVETGHGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGH-KV 426
GTV V GHG +K L NV F+P L NLLSVGQLM G+S+LFD TCVI KKS V
Sbjct: 370 GTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIV 429
Query: 427 QIAMTSNKMFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRI 486
+ M +NK+FPL++S++E AL +S LWHLRYGHL++ GLK+L K MVFGLP+I
Sbjct: 430 DVRMAANKLFPLEVSSIEKHALVVKGTSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI 489
Query: 487 DSTNLCEGCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDY 546
DS N+CEGCIYGKQ++K FP G++RRAS CLE+IHADLCGPMQT S GGS YFLLF DD+
Sbjct: 490 DSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDH 549
Query: 547 SRMSWVYFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQ 606
SRMSWVYFLQ K+ETF+ F+ FKA VE QSG+ IKVLRTDRGGEF+S +F +FCEEEG+
Sbjct: 550 SRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLH 609
Query: 607 RELTAPYTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVM 666
RELT P +PEQNG+AERKNRT+VEMARSM++A+ L + FWAE VAT+VYLLNISPTKAV+
Sbjct: 610 RELTTPCSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVL 669
Query: 667 NRTPYEAWHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYN 726
NRTPYEA C K K YKLYN
Sbjct: 670 NRTPYEA---------------C-------------------KVHLYWLLLLIKGYKLYN 729
Query: 727 PISEKILVRRDVIFNENVSWDWSKEQEQQKITVEVSPNEETRVNSSASPNVS-TATQNVS 786
P+S KI+V R+V+F+E SW W ++ VE+S E + P+V A+ S
Sbjct: 730 PVSGKIIVSRNVVFDEKASWTWRVSED--GALVEISSESEVARSEDRQPSVQIPASPTPS 789
Query: 787 NSSSSASLNSDSSLEELSDETPPKKYKSLTDIYASCQFALTVSDPMCYDEAAEREEWKKA 846
+S SS +L+S SS + S+ETP +K++SL DIY + Q L V+DP ++E E+EEW A
Sbjct: 790 HSPSSPNLSSSSS-SQSSEETPLRKFRSLRDIYETTQ-VLFVADPTTFEEVVEKEEWCSA 849
Query: 847 MVEEMQSIEKNGTWEMVDLPNEKNAINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQGI 906
M EE+ +IEKN WE+V+LP +KN I +KWVF+TK+ DGSIQKHKARLVAKGYAQQ G+
Sbjct: 850 MKEEIAAIEKNEIWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGV 909
Query: 907 DFEETFSPVARFETVRTILALAAELRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDK 966
D+++TFSPVARFETVRT+LALAA + W VYQFDVKSAFLNG+L EEVYV+QPEGFI K
Sbjct: 910 DYDDTFSPVARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYVSQPEGFIVPGK 969
Query: 967 ETKVYKLRKALYGLKQAPRAWYSKIDGYFQKKGYMRSENEPTLYVKKEGKSDFIIICLYV 1026
E VY+L+KALYGLKQAPRAWYSKID YF + G+ RS++EP +Y+K++GK+D +IICLYV
Sbjct: 970 EEHVYRLKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNIYLKRQGKNDLLIICLYV 1029
Query: 1027 DDIIYTSSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDIMS 1086
DD+IY SS+ L+++FK+ M +FEMSD+GLLH+FLGLEV QVEDG+F+SQRKY D++
Sbjct: 1030 DDMIYMGSSSFLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYVVDLLK 1089
Query: 1087 KFGMLNCKPAATPMNINEKLQHDDGAEMTDARRFRSLVGGLIYLTHTRPDIAFPVGIISK 1146
KF MLNCK AT MN NEKLQ +DG E DARRFRSLVGGLIYLTHTRPDIAF VG+IS+
Sbjct: 1090 KFNMLNCKVVATLMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFSVGVISR 1149
Query: 1147 FMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRRSISANV 1206
FM +PSK H GAAKR+LRYIAGT ++GIWY FKL G+TDSDWAG L DR++ S +
Sbjct: 1150 FMHYPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLKDRKNTSGYM 1209
Query: 1207 FTLGSGAITWSSKKQATVALSTSEAEYVAATSAACQAIWLRRMLADLQQEQKGATKIFCD 1266
F+LGSGA+ WSSKKQA +ALS+SEAEY ATS+ACQA+WLRR+LAD+ QE + T I+CD
Sbjct: 1210 FSLGSGAVCWSSKKQAVIALSSSEAEYTVATSSACQAVWLRRILADINQEHEEPTVIYCD 1269
Query: 1267 NKATISMTKNPAFHSRTKHIELRHHYIRDLVADEEIVLEYCNTDEQLADILTKALSKEKF 1326
NKA I+MTKNPA+H RTKH+++R H+IRDLV + ++VL+YCNT+EQ+AD+LTKALS++K
Sbjct: 1270 NKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKH 1301
Query: 1327 CYFRRLLGICNFESRGSVE 1335
YFR LG+CNFESRGSVE
Sbjct: 1330 VYFRSKLGVCNFESRGSVE 1301
BLAST of CmoCh03G003980 vs. NCBI nr
Match:
RVW67792.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 1593.9 bits (4126), Expect = 0.0e+00
Identity = 816/1333 (61.22%), Postives = 1001/1333 (75.09%), Query Frame = 0
Query: 7 SSSAPLLPIFNGEKYEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKND 66
S S P +PIF GE YE+WSIKMKTL +SQ+LWDLVE+G+ P +E+ RL+E K D
Sbjct: 10 SVSQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTKKD 69
Query: 67 AKALFIIQQAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMT 126
+KALF IQQA G SKVI VKLQSLRRDFETL M
Sbjct: 70 SKALFFIQQA---------------------------GSSKVITVKLQSLRRDFETLHMK 129
Query: 127 NGESIADFLSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILS 186
NGES+ DFLSR IV+QMR+YGE I D+T+VAKVLRSLTPKFDHVVAAIEE+KDLS S
Sbjct: 130 NGESVQDFLSRVATIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYS 189
Query: 187 VDELMGSLQAHEARINRASERNEEKALQVK-ETTNNERENSHLAGRSRGRGGFRSFHGGR 246
DELMGSLQ+HE R++R E+NEEKA K ET++ + E GR RGRGG GR
Sbjct: 190 FDELMGSLQSHEVRLSRTEEKNEEKAFYTKGETSDQKNEGREATGRGRGRGGAH----GR 249
Query: 247 DNRGRWRSDGQRQFNEQKNVIQCYYCKRYGHTKSNCWYKNQQMNFA--AENEEEEEKLLM 306
RGR R++ CW K +Q A E EE++ KL M
Sbjct: 250 GGRGRGRAE--------------------------CWKKERQEKQANYVEQEEDQVKLFM 309
Query: 307 ACMDTNPRKGDLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKGTVKVE 366
A + ++WF+DSGCSNHMTG KSLFKELDE+ K+KV+LG+ K++QVEGKG V V
Sbjct: 310 AYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGIVAVN 369
Query: 367 TGHGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGH-KVQIAMTS 426
GHG +K L NV F+P L NLLSV QLM G+S+LFD TCVI KKS V + M +
Sbjct: 370 NGHGNVKLLYNVYFIPSLTQNLLSVRQLMVSGYSILFDGATCVIKDKKSDQIIVDVRMAA 429
Query: 427 NKMFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRIDSTNLC 486
NK+FPL++S++E AL +S LWHLRYGHL++ GLK+L K MVFGLP+IDS N+C
Sbjct: 430 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVC 489
Query: 487 EGCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSRMSWV 546
EGCIYGKQ++K FP G++RRAS CLE+IHADLCGPMQT S GG+ YFLLF DD+S+MSWV
Sbjct: 490 EGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGNRYFLLFTDDHSKMSWV 549
Query: 547 YFLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQRELTAP 606
YFLQ K+ETF+ F+ FKA V QSG+ IKVLRTDRGGEF+S +F +FCEEEG+ RELT
Sbjct: 550 YFLQSKAETFETFKKFKAFVGKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTS 609
Query: 607 YTPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVMNRTPYE 666
Y+PEQNG+AERKNRT+VE+ARSM++A+ L + FWAE VAT+VYLLNIS TKAV+NR PYE
Sbjct: 610 YSPEQNGVAERKNRTVVEIARSMMKAKNLSNHFWAEGVATAVYLLNISQTKAVLNRIPYE 669
Query: 667 AWHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYNPISEKI 726
AW+ RKP VSHL++F VAY L KLDEKS KCIFIGYC+QSK YKLYNP+S KI
Sbjct: 670 AWYGRKPWVSHLKVFCSVAYTLIDSHNCSKLDEKSAKCIFIGYCSQSKGYKLYNPVSGKI 729
Query: 727 LVRRDVIFNENVSWDWSKEQEQQKITVEVSPNEETRVNSSASPNVS-TATQNVSNSSSSA 786
+V R+V+F+E SW W ++ VE+S E + P+V A+ S+S SS
Sbjct: 730 IVSRNVVFDEKASWTWRVSED--GALVEISSESEVAQSEDQQPSVQIPASPTPSHSPSSP 789
Query: 787 SLNSDSSLEELSDETPPKKYKSLTDIYASCQFALTVSDPMCYDEAAEREEWKKAMVEEMQ 846
+L+S SS + S+E PP+K++SL DIY + Q L V+DP ++EA E+EEW AM EE+
Sbjct: 790 NLSSSSS-SQSSEEAPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIA 849
Query: 847 SIEKNGTWEMVDLPNEKNAINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQGIDFEETF 906
+IEKN TWE+V+LP +KN I +KWVF+TK+ DGSIQKHKARLVAKGYAQQ G+D+++TF
Sbjct: 850 AIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTF 909
Query: 907 SPVARFETVRTILALAAELRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDKETKVYK 966
SPVARFET+RT+LALAA + W VYQFDVKSAFLNG+L EEVYV+QPEGFI KE VY+
Sbjct: 910 SPVARFETIRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYVSQPEGFIVPGKEEHVYR 969
Query: 967 LRKALYGLKQAPRAWYSKIDGYFQKKGYMRSENEPTLYVKKEGKSDFIIICLYVDDIIYT 1026
L+KALYGLKQAPRAWYSKID YF + G+ RS++EP LY+K++GK+D +IICLYVDD+IY
Sbjct: 970 LKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYM 1029
Query: 1027 SSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDIMSKFGMLN 1086
SS+SL+++FK+ M +FEMSD+GLLH+FLGLEV QVEDG+F+SQRKYA D++ KF MLN
Sbjct: 1030 GSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLN 1089
Query: 1087 CKPAATPMNINEKLQHDDGAEMTDARRFRSLVGGLIYLTHTRPDIAFPVGIISKFMQHPS 1146
CK ATPMN NEKLQ +DG E DAR FRSLVGGLIYLTHTRPDIAF VG+IS+FM PS
Sbjct: 1090 CKVVATPMNSNEKLQAEDGTERDDARMFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPS 1149
Query: 1147 KVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRRSISANVFTLGSG 1206
K H GAAKR+LRYIAGT ++GIWY FKL G+TDSDWAG L+DR+S S +F+LGSG
Sbjct: 1150 KQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSG 1209
Query: 1207 AITWSSKKQATVALSTSEAEYVAATSAACQAIWLRRMLADLQQEQKGATKIFCDNKATIS 1266
A+ WSSKKQA ALS+SEAEY AATS+ACQA+WLRR+LAD+ QE + T I+CDNKA I+
Sbjct: 1210 AVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIA 1269
Query: 1267 MTKNPAFHSRTKHIELRHHYIRDLVADEEIVLEYCNTDEQLADILTKALSKEKFCYFRRL 1326
MTKNP +H RTKH+++R H+IRDLV + ++VL+YCNT+EQ+AD+LTK LS++K YFR
Sbjct: 1270 MTKNPTYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKTLSRDKHVYFRSK 1276
Query: 1327 LGICNFESRGSVE 1335
LG+CNFESRGSVE
Sbjct: 1330 LGVCNFESRGSVE 1276
BLAST of CmoCh03G003980 vs. NCBI nr
Match:
CAN60238.1 (hypothetical protein VITISV_032906 [Vitis vinifera])
HSP 1 Score: 1578.9 bits (4087), Expect = 0.0e+00
Identity = 805/1331 (60.48%), Postives = 993/1331 (74.61%), Query Frame = 0
Query: 15 IFNGEKYEWWSIKMKTLLRSQELWDLVEHGFVDLLEPTIEEKERLRETKKNDAKALFIIQ 74
+ GE YE+WSIKMKTL +SQ+LWDLVE+G+ P +E+ RL+E K D+KALF IQ
Sbjct: 132 VVEGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTKKDSKALFFIQ 191
Query: 75 QAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVIIVKLQSLRRDFETLLMTNGESIADF 134
QA+HE+IFS+IA ATT+K+AW+ L+ FQG SKVI VKLQSLRRDFETL M NGES DF
Sbjct: 192 QAIHESIFSKIAVATTAKEAWTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGESXQDF 251
Query: 135 LSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILSVDELMGSL 194
LSR AIV+QMR+YGE I D+T+VAKVLRSLTPKFDHVVA IEE+KDLS S DELMGSL
Sbjct: 252 LSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAXIEESKDLSTYSFDELMGSL 311
Query: 195 QAHEARINRASERNEEKALQVK-ETTNNERENSHLAGRSRGRGGFRSFHGGRDNRGRWRS 254
Q+HE R++ ++NEEK K ET++ + GR RGRGG GR RGR R
Sbjct: 312 QSHEVRLSXTEDKNEEKXFYTKGETSDXKNGGREXTGRGRGRGGAH----GRGGRGRGRG 371
Query: 255 DG---QRQFNEQ---KNVIQCYYCKRYGHTKSNCWYKNQQMNFA--AENEEEEEKLLMAC 314
D QRQ E+ K+ I CYYCKR+GH ++ CW K +Q A E EE++ KL MA
Sbjct: 372 DAQGDQRQSTEKSRNKSNIXCYYCKRFGHVQAECWKKERQEKQANYVEQEEDQVKLFMAY 431
Query: 315 MDTNPRKGDLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKGTVKVETG 374
+ ++WF+DSGCSNHMTG KSLFKELDE+ K+ V+LG+ ++QVEGKGTV V G
Sbjct: 432 NEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLXVKLGDDXQVQVEGKGTVAVNNG 491
Query: 375 HGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSVLFDDNTCVITHKKSGHK--VQIAMTSN 434
HG +K L NV F+P L L+ C T+ K + V + M +N
Sbjct: 492 HGNVKLLYNVYFIPSLTEKLVK-----------------CGATYDKKSDQIIVDVRMAAN 551
Query: 435 KMFPLDISNMEDFALAASTKDDSTLWHLRYGHLHMNGLKILRNKGMVFGLPRIDSTNLCE 494
K+FPL++S++E AL +S LWHLRYGHL++ GLK+L K MVF LP+IDS N+CE
Sbjct: 552 KLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFELPKIDSVNVCE 611
Query: 495 GCIYGKQTRKSFPVGKARRASHCLELIHADLCGPMQTNSLGGSIYFLLFIDDYSRMSWVY 554
GCIYGKQ++K FP G++RRAS CLE+IHADLCGPMQT S GGS YFLLF DD+SRMSWVY
Sbjct: 612 GCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVY 671
Query: 555 FLQHKSETFQKFQMFKAMVENQSGRHIKVLRTDRGGEFISKEFNLFCEEEGIQRELTAPY 614
FLQ K+ETF+ F+ FKA VE QSG+ IKVLRTDR GEF+S +F +FCEEEG+ RELT PY
Sbjct: 672 FLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRXGEFLSNDFKVFCEEEGLHRELTTPY 731
Query: 615 TPEQNGIAERKNRTIVEMARSMLQARRLPDQFWAEAVATSVYLLNISPTKAVMNRTPYEA 674
+PEQNG+AERKNRT+VEMARSM+ A+ L + FWAE VAT+VYLLNISPTKAV+NRTPYEA
Sbjct: 732 SPEQNGVAERKNRTVVEMARSMMXAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEA 791
Query: 675 WHRRKPSVSHLRIFGCVAYALKRPQVRQKLDEKSEKCIFIGYCTQSKAYKLYNPISEKIL 734
W+ RKP VSHL++FG VAY L R KLDEKS KCIFIGYC+QSK YKLYNP+S KI+
Sbjct: 792 WYGRKPWVSHLKVFGSVAYTLXBSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKII 851
Query: 735 VRRDVIFNENVSWDWSKEQEQQKITVEVSPNEETRVNSSASPNVSTATQNVSNSSSSASL 794
V R+V+F+E S W ++ VE+S E + P+V + S S+
Sbjct: 852 VSRNVVFDEKASXTWRVSED--GALVEISSESEMAQSEDQQPSVQIPXSPTPSHSPSSPN 911
Query: 795 NSDSSLEELSDETPPKKYKSLTDIYASCQFALTVSDPMCYDEAAEREEWKKAMVEEMQSI 854
S SS + S+ETPP+K++SL DIY + Q L V+DP ++EA E+EEW AM EE+ +I
Sbjct: 912 LSXSSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIAAI 971
Query: 855 EKNGTWEMVDLPNEKNAINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQGIDFEETFSP 914
EKN TWE+V+LP +KN I +KWVF+TK+ DGSIQKHKARLVAKGYAQQ G+D+++TFSP
Sbjct: 972 EKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSP 1031
Query: 915 VARFETVRTILALAAELRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDKETKVYKLR 974
VARFETVRT+LALAA + W VYQFDVKSAFLNG+L EEVY +QPEGFI DKE VY+L+
Sbjct: 1032 VARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLK 1091
Query: 975 KALYGLKQAPRAWYSKIDGYFQKKGYMRSENEPTLYVKKEGKSDFIIICLYVDDIIYTSS 1034
ALYGLKQAPRAWYSKID YF + G+ +S++EP LY+K++GK+D +IICLYVDD+IY S
Sbjct: 1092 XALYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGS 1151
Query: 1035 SNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDIMSKFGMLNCK 1094
S+SL+++FK+ M +FEMSD+GLLH+FLGLEV QVEDG+F+SQRKYA D++ KF MLNCK
Sbjct: 1152 SSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCK 1211
Query: 1095 PAATPMNINEKLQHDDGAEMTDARRFRSLVGGLIYLTHTRPDIAFPVGIISKFMQHPSKV 1154
A PMN NEKLQ +DG E DARRFRSLVGGLIYLTHTRPDIAF VG+IS+FM PSK
Sbjct: 1212 VVAIPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQ 1271
Query: 1155 HYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRRSISANVFTLGSGAI 1214
H GA KR+LRYIAGT ++ IW FKL G+TDSDWAG L+DR+S S +F+LGS
Sbjct: 1272 HLGATKRLLRYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGS--- 1331
Query: 1215 TWSSKKQATVALSTSEAEYVAATSAACQAIWLRRMLADLQQEQKGATKIFCDNKATISMT 1274
AEY ATS+ACQA+WLRR+LAD+ QE + T I+CDNKA I+MT
Sbjct: 1332 ----------------AEYTVATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMT 1391
Query: 1275 KNPAFHSRTKHIELRHHYIRDLVADEEIVLEYCNTDEQLADILTKALSKEKFCYFRRLLG 1334
KNPA+H RTKH+++R H+IRDLV + ++VL+YCNT+EQ+AD+LTKALS++K YFR LG
Sbjct: 1392 KNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLG 1414
BLAST of CmoCh03G003980 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 370.2 bits (949), Expect = 7.2e-102
Identity = 207/538 (38.48%), Postives = 318/538 (59.11%), Query Frame = 0
Query: 801 YKSLTDIYASCQFALT-VSDPMCYDEAAEREEWKKAMVEEMQSIEKNGTWEMVDLPNEKN 860
Y+ ++ +Y S + +P Y+EA E W AM +E+ ++E TWE+ LP K
Sbjct: 66 YEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKK 125
Query: 861 AINLKWVFKTKFAPDGSIQKHKARLVAKGYAQQQGIDFEETFSPVARFETVRTILALAAE 920
I KWV+K K+ DG+I+++KARLVAKGY QQ+GIDF ETFSPV + +V+ ILA++A
Sbjct: 126 PIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 185
Query: 921 LRWPVYQFDVKSAFLNGDLQEEVYVAQPEGFIKKDKET----KVYKLRKALYGLKQAPRA 980
+ ++Q D+ +AFLNGDL EE+Y+ P G+ + ++ V L+K++YGLKQA R
Sbjct: 186 YNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQ 245
Query: 981 WYSKIDGYFQKKGYMRSENEPTLYVKKEGKSDFIIICLYVDDIIYTSSSNSLLDKFKSQM 1040
W+ K G+++S ++ T ++K + F+ + +YVDDII S++++ +D+ KSQ+
Sbjct: 246 WFLKFSVTLIGFGFVQSHSDHTYFLKITA-TLFLCVLVYVDDIIICSNNDAAVDELKSQL 305
Query: 1041 MSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYAKDIMSKFGMLNCKPAATPMNINEKL 1100
S F++ D+G L YFLGLE+ + GI I QRKYA D++ + G+L CKP++ PM+ +
Sbjct: 306 KSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF 365
Query: 1101 QHDDGAEMTDARRFRSLVGGLIYLTHTRPDIAFPVGIISKFMQHPSKVHYGAAKRVLRYI 1160
G + DA+ +R L+G L+YL TR DI+F V +S+F + P H A ++L YI
Sbjct: 366 SAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYI 425
Query: 1161 AGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRRSISANVFTLGSGAITWSSKKQATVAL 1220
GT+ G++YS + +L F+D+ + D RRS + LG+ I+W SKKQ V+
Sbjct: 426 KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSK 485
Query: 1221 STSEAEYVAATSAACQAIWLRRMLADLQQEQKGATKIFCDNKATISMTKNPAFHSRTKHI 1280
S++EAEY A + A + +WL + +LQ T +FCDN A I + N FH RTKHI
Sbjct: 486 SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 545
Query: 1281 ELRHHYIRD-LVADEEIVLEYCNTDEQLADILTKALS---KEKFCYFRRLLGICNFES 1330
E H +R+ V + + DEQ D T+ LS + Y + G+ E+
Sbjct: 546 ESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
BLAST of CmoCh03G003980 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 185.7 bits (470), Expect = 2.5e-46
Identity = 98/225 (43.56%), Postives = 140/225 (62.22%), Query Frame = 0
Query: 1011 ICLYVDDIIYTSSSNSLLDKFKSQMMSEFEMSDMGLLHYFLGLEVYQVEDGIFISQRKYA 1070
+ LYVDDI+ T SSN+LL+ Q+ S F M D+G +HYFLG+++ G+F+SQ KYA
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 1071 KDIMSKFGMLNCKPAATPMNINEKLQHD-DGAEMTDARRFRSLVGGLIYLTHTRPDIAFP 1130
+ I++ GML+CKP +TP+ + KL A+ D FRS+VG L YLT TRPDI++
Sbjct: 63 EQILNNAGMLDCKPMSTPLPL--KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 122
Query: 1131 VGIISKFMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGFTDSDWAGSLDDRR 1190
V I+ + M P+ + KRVLRY+ GT+ +G++ K+S + F DSDWAG RR
Sbjct: 123 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 182
Query: 1191 SISANVFTLGSGAITWSSKKQATVALSTSEAEYVAATSAACQAIW 1235
S + LG I+WS+K+Q TV+ S++E EY A A + W
Sbjct: 183 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of CmoCh03G003980 vs. TAIR 10
Match:
AT3G21000.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 98.6 bits (244), Expect = 4.0e-20
Identity = 102/398 (25.63%), Postives = 180/398 (45.23%), Query Frame = 0
Query: 21 YEWWSIKMKTLLRSQELWDLVEHGFVD------LLEPTI--EEKERLRETKKNDAKALFI 80
YE W+ K+ L Q LWD+V +G L TI EE + R+ DAKAL I
Sbjct: 17 YEIWAPITKSTLIEQGLWDVVVNGVPQDPSKNPELAATIQPEELSKWRDFVVKDAKALQI 76
Query: 81 IQQAVHETIFSRIAAATTSKQAWSILQKEFQGDSKVII-----VKLQSLRRDFETLLMTN 140
+Q ++ +++F + +A+++K W +L+K G+ + I V ++ L + E L M +
Sbjct: 77 LQSSLTDSVFRKTLSASSAKDVWDLLRK---GNEQATIRRLEQVTIRRLEKQLEDLKMVD 136
Query: 141 GESIADFLSRTMAIVSQMRTYGEKISDETIVAKVLRSLTPKFDHVVAAIEEAKDLSILSV 200
ES + +L + + I+ ++ + SD I V +L+ FD + + +EE D+ ++
Sbjct: 137 KESGSSYLDKALEILERLGRAKLEKSDYEICKNVFTTLSGSFDGLDSMLEELIDVHKMTS 196
Query: 201 DELMGSLQAHEARINRASERNEEKALQVKETTNNERENSHLAGRSRGRGGFRSFHGGRDN 260
L+ E R E + E+A+ F +D
Sbjct: 197 KSLV------EYFYYRVHESSTEEAI---------------------------FGLLKDL 256
Query: 261 RGRWRSDGQRQFNEQKNVIQCYYCKRYGHTKSNCWYKNQQMNFAAENEEEEEKLLMAC-M 320
R + +S+ C C + H + +C ++ + EE+E+++++ +
Sbjct: 257 RLKSKSEK-----------WCGLCYKNNHNQEDCKFR-----IHTDKEEKEDEIVVDYRL 316
Query: 321 DTNPRKG------DLWFVDSGCSNHMTGTKSLFKELDETQKIKVQLGNTKEMQVEGKGTV 380
+T P G D+W + +MT F LD T K V + + VEGKG V
Sbjct: 317 ETVPNLGAKTYDDDIWIIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDV 362
Query: 381 KVETGHGKIKQLDNVQFVPDLGYNLLSVGQLMTRGHSV 399
K+ GK K + NV FVP L N+LS G+++++ +S+
Sbjct: 377 KIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMVSKRYSI 362
BLAST of CmoCh03G003980 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 95.1 bits (235), Expect = 4.5e-19
Identity = 49/114 (42.98%), Postives = 74/114 (64.91%), Query Frame = 0
Query: 812 QFALTVS-----DPMCYDEAAEREEWKKAMVEEMQSIEKNGTWEMVDLPNEKNAINLKWV 871
+++LT++ +P A + W +AM EE+ ++ +N TW +V P +N + KWV
Sbjct: 15 KYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWV 74
Query: 872 FKTKFAPDGSIQKHKARLVAKGYAQQQGIDFEETFSPVARFETVRTILALAAEL 921
FKTK DG++ + KARLVAKG+ Q++GI F ET+SPV R T+RTIL +A +L
Sbjct: 75 FKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQL 128
BLAST of CmoCh03G003980 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 67.4 bits (163), Expect = 1.0e-10
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0
Query: 1117 IYLTHTRPDIAFPVGIISKFMQHPSKVHYGAAKRVLRYIAGTMEYGIWYSKSSNFKLYGF 1176
+YLT TRPD+ F V +S+F A +VL Y+ GT+ G++YS +S+ +L F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1177 TDSDWAGSLDDRRSIS 1193
DSDWA D RRS++
Sbjct: 61 ADSDWASCPDTRRSVT 76
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 3.5e-210 | 34.49 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| P04146 | 1.4e-163 | 28.90 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
| Q9ZT94 | 8.4e-156 | 28.69 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
| Q94HW2 | 3.2e-155 | 28.50 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
| P92519 | 3.5e-45 | 43.56 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A438CQE1 | 0.0e+00 | 63.01 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| Q6L3N8 | 0.0e+00 | 61.34 | Putative gag-pol polyprotein, identical OS=Solanum demissum OX=50514 GN=SDM1_42t... | [more] |
| A0A438C6S9 | 0.0e+00 | 61.54 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A0A438G6H0 | 0.0e+00 | 61.22 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A5AHH2 | 0.0e+00 | 60.48 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032906 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| RVW25417.1 | 0.0e+00 | 63.01 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| AAT38758.1 | 0.0e+00 | 61.34 | Putative gag-pol polyprotein, identical [Solanum demissum] | [more] |
| RVW18954.1 | 0.0e+00 | 61.54 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| RVW67792.1 | 0.0e+00 | 61.22 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| CAN60238.1 | 0.0e+00 | 60.48 | hypothetical protein VITISV_032906 [Vitis vinifera] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G23160.1 | 7.2e-102 | 38.48 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
| ATMG00810.1 | 2.5e-46 | 43.56 | DNA/RNA polymerases superfamily protein | [more] |
| AT3G21000.1 | 4.0e-20 | 25.63 | Gag-Pol-related retrotransposon family protein | [more] |
| ATMG00820.1 | 4.5e-19 | 42.98 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
| ATMG00240.1 | 1.0e-10 | 42.11 | Gag-Pol-related retrotransposon family protein | [more] |
