CmoCh03G002890 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G002890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	KH domain-containing protein
Location	Cmo_Chr03: 4114763 .. 4121010 (+)
RNA-Seq Expression	CmoCh03G002890
Synteny	CmoCh03G002890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCAGCTTCCGTATATTTACAGGCGTCCACCCTTTTACTCCTTACCTCCTGACCTCTGCCTCCGCCTCCGCCTCCATCGTCGGAACTGTTCTTATCCACCGTCTTCGCCGGCGACATCGCCGTCTCCATCTTCCGACATCCCTCTTCCATTTCCCAATCCTACGATTCTCAGAACATCCATTTCTGCTCACAGTTAAATAGCCAAAGGCCATGTCCGGTATGTACGGTACCAACTTCTCCCCTGCAAGAACTGCTTCGCCTCACATCAGGACTACTCCTGATGGAGACAGGTACCACTTCCGATAATCCACTTCCGAGAATTTTCTTTAATTTAACGATTCTAGAGTTTGCTCAGCTTGTTAAAGCTGAGATTACTAATTGAATAATCAATCCCCCCTTTGGTTCTTTGTTTTTTAATCTTTAGTCAGTACTTGTCGGAGCTACTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGTAGCCGACTTTTGAATCAAGGTAGTGCTCTTCTCTGAATTTTTGGTGTTCCTGAATTTATTTCAGTGCTTAATTATTGCGGCGGTGTTTATGTGTATGTCTAGATCGGTGAAGCTGGTGAACTTCTCCTTTTTCCTCTTTAGTATCATTAGCGATTGCTCTCTTTGCCCTCGGGGTTGACTGTTGAATTGTGCATATGTTAGTCTTGGATAATCTCTTTCACTTTCTTGAATCTGGTTTTGTGGAATTCTGTTCTTTTGATTGCTGGAAAAATCTTAGCTACTCTTGTTGGGTGCTTAATTCTTCTAGTACACGATGTTCTACATGTTATGCATATCCATTCTGTTAGATTTTTCTTCTTAAGTTTTGGAGAGTTATGCATTCTTTATACTAATATCTTGTACAAAAGTCTCTTCTGATGTATCACTGTCATGAACTAATATACCATTGAAAGACCAAAAGCCTCGTGCTTACGTTAAGCTTCGAAAAGCGATATTCAAGCTTTTTGTGTTATAAGAATTGAAGGTTTAATTCATTAAGTTTGGTTTAGAATGTTATTAGATGTTTATTAATTCTTGTTATGTCAGTACGGGAGTATATGATTGTTCGCTAAAATCATGTCTACACCTATGAAAGCTAAAATATCTCAAAATATACTATAGGAGAAGTGTTTAGTTGTTAATTCTTCCTACCCATATTATACGCTATTAACGATTTCCGAACGCTTTCTAAAATTTTCTCTGTATCTTTTCTTTTCTTTTTTTTTTTGATAAGAGAATAAAATTTTCTCTATATCACCTTTTTTCTAAAATATTTTATGAGGAATGAGACTAGATGACCCAAGTTCTAGTGGGCTGACTCTTGAGGGTGAGAATAAGTGGTGCACAATAACGTTGCGAGTCCTGACAAAGTGCGATTGTGACACCAAAATGATTTTTTTTGGTGCGAATCCCGACCTTTCATTTAACATTTTAACGAATTTTCTACTCTAAAAGTAATTTTGAATTATTTACAATAATGTGTAATTTTGAAAAAATAAAGATTATTTATAATTTGAAAATATTGTAAAGAATGAAACAAGTGGACTTCGTCTTCAAATCTTAGCTGTATCATGAAGTGATGGTTCCATTTGGACCCAATATATAATCTATTCATCAGTAGTGGAGGTTTGAATTCATCTAAATTGGTGATGCGACAATCTCATGCTGACAATCTGTTCTTTTTTGGTCATTCACTATAACTTAGTCTATGACATAAGAACTGAAGGCTGGATGTTGAATGTGGTAAAGCTTTTCAAGTGAAGGCTAATCATTTAAGGCCCCGAAATATGTAGTAGTTTTAGAACTCAAAGTGTGAATAAAAAAAAACGGTGCTCTTAGTAGACCTTGTGTAAGAGCTTCCTCGATCAGGATCTATTCGTTAGGTTGTACCTCTTGCATTTTTGAGTTCTAAGTCTAGTGCTGTTCGAACTTACGGAGTTGTCCTTGGATTCTTTGGTGTTTGATAGTCACGTAATGCTCCAAGGCTCAAGTTTCAACCTCCATTTAAATTGCCATATTGGGTGTTGATGAACTTCATCCTGCTCTGAACAGCATAGTATTTGTTTGCACTTCCTAATTGATCTTGTTATAGAGTTCGGTTTTGTTTATAAGTATTCTTCTCTGTACTTAATGCACAAATATATTTCTATATCTTCCTTTTGGTATGTTTCTGCTTTTCAATTCTGTCGGTAACTTCTAACAGCAAGCTCTTTAAATGCAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGCGACCTCGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATATCTAATGTTAGTACCACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGGTAATTACTATTTTAGCATCAAAACTCCATTGGTAACTCCTGATACCTGTTGATCTCATCATTTTGAGTACAATTTTAGTATGTTTTGATATATAGGCTAACATATGCCATCATTGTTACTCGATAGTTTGAAGGTAACATTGTAATTCTCCCTCTAAAGTAGGCTCGTAGCTTGAGGGATTGGGGCTGCAATAAATGTTGCAGTGTGCCATTATTTATAGCTAATTACAAAAGTTTGTTCGTCATTTTATTTAATATGAATTTTGGGAATATATGCAGCGAGAGAAGGAGCGGACTTGAATTTGTCTTTAACTCAGTATTTGTTCTTGAGTTGAACACGTCTCATGAAATTGATAGTTTCTTTTCCATTAGTTAATCTTCTTATTTTTGTGTGTTTGTTTGTTCGTTCTCAATAAGATTGTAATAATACTAATTAATTTGCTTATTGAGATCTAATTTACTCTCATAGATGGGAAAAAACGTGAAACTTATTATTTTTTTCGGTAAGAAACTGTGCTTTCATATAGAGAAATGAAAGAACTAGATCTACCAGAGAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGCCAACAATAAAAATGGAGACTCGTTGAAATTACAAAAAGTGGAATTTGCCTATTGTAACGACCCAAGACCACTGCTAGCAAATATTGTCCTCTTTGGGCTTTCTCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTGTTAGGGAGAGATTTCTACACCCTTATAAAGATGCTTCGTTCTCTTCTCCAACCGATGTGGGATCTCACACTATGTTAAGAGCCTATGTTAAGAGCTTGTAGCCTTGAGTACATTTCTAGCCTGTAAACTTCCAATCTTGAAAATCTTACTCCAATGACTTCAAAAATAAAAGAAGTGTGAGAGGATTTCTTTGGCTCCATGTTTAGGCTTGTGATAATGAATATATTTTGCTATTTTTTTACTTTCTCGTTTGAGTGGCCAAAAAATTCTTCGCCATTCTTGAGGATTGCCTTGCACGGGCTACGCTTATTGGTTCTCCACTTTAAAACTCAACTGAAAGCATCATCTATAAGACCAAAGAAGAAGAAGAAGAAAAAAGAAAAAAAGAATTAGAAACAAATCTGGATAATCCCAATGTTTCTAGCAAAAGTTGGCCTCTTGATGGTACATTATTCGAAGTTATTACAAAGAACCATTGAAGAATGTTTCAACAATATATAGATGGCATTATGATAATGTTTTTCCAGGCTACTTTTTTCTGTTGCAGTTCTTTCATCTTCATTTTGGATCCCCTGATTGATTATTTGATCTTTGCATACTGATATCTCCTGCACTTACAGTCCTCATATCCTGTTATATTCATATAGAATTCTTTCTATGTTAATTAGTCTTCAGGATGGTTTGGTTTAAAAAAAGTTGTTTTAATATGGTAGAACCTTTTGAAACTTACAGCAGAGATTAAGTAGAGCCACCGGAATGACAATGGACTGGCAAAGTGCACCTGCGAGTCCTAGTTCGCTCACCGTGAAGAGAATTCTACGTTTGGAAATACCTGTGGATACTTACCCCAATGTAAGTTCTGTCGAAGTACAGATGTTTTTTGTTTGCTGGTCATACGCTAGCCGGTTTGTACGACCTGTACGTACACAAACCTATATATTAATACTTGAAGTTTCTGCTCTTTGTGGATGTCAGTTCAATTTTGTAGGGCGACTTTTGGGTCCTCGGGGCAATTCCTTGAAACGTGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCCGTAAAGGATCCAGACAAGGTACTATAAGGGTATCTCTAATTTGGAATCAATGTATCACATGATGGATCTCTCAAGAATCAAGACTATTGTAGAGATATTTTGCTTCTCTCATTGGATTGTTATCATTCTGTTGAGCAGTAGTATTGGTTATAAATTGTATTCGTACTTAATTTATTTAACTTTTACATTGTCAAGGAAGAGAAGTTACGGGGACGACCCGGCTACGAGCACTTGAACGAACCACTGCACATCTTGATTGAGGCAGATTTACCAGCCAATATTGTTGATATAAGGCTCAGACAGGCACAAGAAATTATTGAAGAACTGCTCAAACCCGTGGTATATTTTCTTACCTTGGTTACGTTTTTCGAGCGATTTTGGCTGGCCAAAGTCACTCTTTTCATGCTCAAAAGTACTTCCCACTAAAATCATCATGTTGTGGAAGAAATTTATAAGCATACACCTTTATATTTATTTTACTCAAAGCCTTGTTCTATTACTCATTTACTTGTTTATGAAACTAAAGTTGCCTTCAAGTACCTTTCTTGAATCAATGGGTCAAGTTATCATCTTACCTACGTTAATCATCAACCCCTCATGGATTTCTTGCATTCCACGTCCTTTGATGCAATCGGTTCAGATTTTTCTTTTTTCTTTTCCCCGAACACGCTGTGTTCTAACAGACTCCTGATTCTTCTGGCATATGAATAATCAACTTGCAGGACGAGAGCCAAGATTACATAAAAAGGCAGCAGCTACGCGAACTCGCTATGCTAAATTCAAGTTTCAGAGAAGACAGTCCAGGACCTGGTGGTAGCGTCTCTCCATTCAACTCAAGCGGAATGAAGCGTGCCAAAACAGGTCGTTAAGTGCTCATATCCTTTCTTACCTTAAAGAATTTCTACCCCAGTCCAGAATTCAGTCACTTGTATAACTCGATGTGAATCTGACCGACCGTGTGACCGACCGTGTGACGTAGCTAGGAGTAAGGGGAGGCGTAACTTCAGTTCCAGGTGAGCCTTCTCTCTGTGTTCCTGAGTGTAGGTTTGAATAGGTCAGTTTTTCCAACAAAGTTAATATATTCATTGGATTTATTCTTGTGTTAGGGACTGCTGAAGAGTGTGTAGTTTTACATTATTAATGCAAAAACATTAGGAAGTGATGAATGTAATATTGTTTGATATTTCTTAGGTGTTGTAATGTAAAAGCAATGTCAGTGTCAATTATATTTTTGGAATGATATATGAAAGAACAGTGCAAAAACTCAATCAATGTGCTTCTCAGTTTGTGTTTGCTATCAAGTTTCAGAATATGATTCTCCTCTCTTTTTTTCCATTTGCTGAAAAAGTTGTGAACATATG

mRNA sequence

ATTTCAGCTTCCGTATATTTACAGGCGTCCACCCTTTTACTCCTTACCTCCTGACCTCTGCCTCCGCCTCCGCCTCCATCGTCGGAACTGTTCTTATCCACCGTCTTCGCCGGCGACATCGCCGTCTCCATCTTCCGACATCCCTCTTCCATTTCCCAATCCTACGATTCTCAGAACATCCATTTCTGCTCACAGTTAAATAGCCAAAGGCCATGTCCGGTATGTACGGTACCAACTTCTCCCCTGCAAGAACTGCTTCGCCTCACATCAGGACTACTCCTGATGGAGACAGTCAGTACTTGTCGGAGCTACTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGTAGCCGACTTTTGAATCAAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGCGACCTCGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATATCTAATGTTAGTACCACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGCAGAGATTAAGTAGAGCCACCGGAATGACAATGGACTGGCAAAGTGCACCTGCGAGTCCTAGTTCGCTCACCGTGAAGAGAATTCTACGTTTGGAAATACCTGTGGATACTTACCCCAATTTCAATTTTGTAGGGCGACTTTTGGGTCCTCGGGGCAATTCCTTGAAACGTGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCCGTAAAGGATCCAGACAAGGAAGAGAAGTTACGGGGACGACCCGGCTACGAGCACTTGAACGAACCACTGCACATCTTGATTGAGGCAGATTTACCAGCCAATATTGTTGATATAAGGCTCAGACAGGCACAAGAAATTATTGAAGAACTGCTCAAACCCGTGGACGAGAGCCAAGATTACATAAAAAGGCAGCAGCTACGCGAACTCGCTATGCTAAATTCAAGTTTCAGAGAAGACAGTCCAGGACCTGGTGGTAGCGTCTCTCCATTCAACTCAAGCGGAATGAAGCGTGCCAAAACAGGTCGTTAAGTGCTCATATCCTTTCTTACCTTAAAGAATTTCTACCCCAGTCCAGAATTCAGTCACTTGTATAACTCGATGTGAATCTGACCGACCGTGTGACCGACCGTGTGACGTAGCTAGGAGTAAGGGGAGGCGTAACTTCAGTTCCAGGTGAGCCTTCTCTCTGTGTTCCTGAGTGTAGGTTTGAATAGGTCAGTTTTTCCAACAAAGTTAATATATTCATTGGATTTATTCTTGTGTTAGGGACTGCTGAAGAGTGTGTAGTTTTACATTATTAATGCAAAAACATTAGGAAGTGATGAATGTAATATTGTTTGATATTTCTTAGGTGTTGTAATGTAAAAGCAATGTCAGTGTCAATTATATTTTTGGAATGATATATGAAAGAACAGTGCAAAAACTCAATCAATGTGCTTCTCAGTTTGTGTTTGCTATCAAGTTTCAGAATATGATTCTCCTCTCTTTTTTTCCATTTGCTGAAAAAGTTGTGAACATATG

Coding sequence (CDS)

ATGTCCGGTATGTACGGTACCAACTTCTCCCCTGCAAGAACTGCTTCGCCTCACATCAGGACTACTCCTGATGGAGACAGTCAGTACTTGTCGGAGCTACTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGTAGCCGACTTTTGAATCAAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGCGACCTCGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATATCTAATGTTAGTACCACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGCAGAGATTAAGTAGAGCCACCGGAATGACAATGGACTGGCAAAGTGCACCTGCGAGTCCTAGTTCGCTCACCGTGAAGAGAATTCTACGTTTGGAAATACCTGTGGATACTTACCCCAATTTCAATTTTGTAGGGCGACTTTTGGGTCCTCGGGGCAATTCCTTGAAACGTGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCCGTAAAGGATCCAGACAAGGAAGAGAAGTTACGGGGACGACCCGGCTACGAGCACTTGAACGAACCACTGCACATCTTGATTGAGGCAGATTTACCAGCCAATATTGTTGATATAAGGCTCAGACAGGCACAAGAAATTATTGAAGAACTGCTCAAACCCGTGGACGAGAGCCAAGATTACATAAAAAGGCAGCAGCTACGCGAACTCGCTATGCTAAATTCAAGTTTCAGAGAAGACAGTCCAGGACCTGGTGGTAGCGTCTCTCCATTCAACTCAAGCGGAATGAAGCGTGCCAAAACAGGTCGTTAA

Protein sequence

MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR

Homology

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BLAST of CmoCh03G002890 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 7.3e-126
Identity = 238/287 (82.93%), Postives = 255/287 (88.85%), Query Frame = 0


Query: 1   MSGMYGTN--FSPARTASPHIRTTPDGD-SQYLSELLAEHQKFGPFMQVLPICSRLLNQE 60
           MSG+Y  +  FSPAR ASP IR+TP+ D SQYL+ELLAEHQK  PFMQVLPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMT 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS TGL GWNGL QE RLS   GMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRG 180
           MDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDES 240
           KGS+KDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+IRLRQAQEIIEELLKPVDES
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 QDYIKRQQLRELAMLNS-SFREDSPGP--GGSVSPFNSSGMKRAKTG 282
           QD+IKRQQLRELA+LNS + RE+SPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of CmoCh03G002890 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 7.3e-126
Identity = 227/284 (79.93%), Postives = 250/284 (88.03%), Query Frame = 0


Query: 1   MSGMYG-TNFSPARTASPHIRT-TPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEI 60
           MSG+Y   NFSP+R ASP IRT + D DSQY+S+LLAEHQK GPFMQVLPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTM 120
            R++GMM NQGF D DRLRHRSPSPMAS NL+SNVS  GL GWNGLP E R+    GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           +WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQ 240
           GS+KDP+KEEKL+G+PGYEHLNE LHILIEADLP +IVDI+LRQAQEIIEEL+KPVDESQ
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           DYIKRQQLRELA+LNS+ RE+SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 DYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of CmoCh03G002890 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-112
Identity = 206/283 (72.79%), Postives = 237/283 (83.75%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTP-DGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEIL 60
           MSG+Y   FSPAR  SP IR+ P D DSQYL+ELLAEHQK GPFMQVLPICS+LL+QEI+
Sbjct: 1   MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIM 60

Query: 61  RVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMD 120
           RVS ++ N GF D DR R RSPSPM+S N  SN S  G S WNGL QE RL    G +MD
Sbjct: 61  RVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQE-RLGFPQGTSMD 120

Query: 121 WQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKG 180
           WQ AP SPSS  VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVE +TGCRV+IRGKG
Sbjct: 121 WQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKG 180

Query: 181 SVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQD 240
           S+KDP KE+KLRG+PGYEHL++PLHILIEA+ PA+I+D RLR AQE+IEELLKPVDESQD
Sbjct: 181 SIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQD 240

Query: 241 YIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           + KRQQLRELAMLNS+ REDSP P GSVSPF++ GMKRAKTG+
Sbjct: 241 FYKRQQLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of CmoCh03G002890 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-75
Identity = 150/274 (54.74%), Postives = 194/274 (70.80%), Query Frame = 0


Query: 8   NFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILRVSGMMSN 67
           NFS    + P      +   +YLSELLAE  K  PF+ VLP   RL+NQEILRV+ ++ N
Sbjct: 43  NFSGGLRSQPSFLVEQE---KYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLEN 102

Query: 68  QGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGW-NGLPQEQRLSRATGMTMDWQSAPAS 127
                L + R   PSP+AS  +  N S   ++GW +  P E+ +S  +    +W ++P S
Sbjct: 103 A----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVS--SSPAPNWLNSPGS 162

Query: 128 PSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSVKDPDK 187
            S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GS+KDP K
Sbjct: 163 SSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIK 222

Query: 188 EEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQL 247
           E+ +RG+PGYEHLNEPLHIL+EA+LP  IVD RL QA+EI+++LL PV+E+ D+ K+QQL
Sbjct: 223 EDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQL 282

Query: 248 RELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKT 281
           RELA+LN S RE+     GS+SP+NS GMKRAKT
Sbjct: 283 RELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of CmoCh03G002890 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.0e-74
Identity = 146/254 (57.48%), Postives = 185/254 (72.83%), Query Frame = 0


Query: 28  QYLSELLAEHQKFGPFMQVLPICSRLLNQEILRVSGMMSNQGFCDLDRLRHRSPSPMASS 87
           +YLSELLAE  K  PF+ VLP   RLLNQEILRV+ ++ N        L H  PSP+AS 
Sbjct: 64  KYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASG 123

Query: 88  NLISNVSTTGLSGW-NGLPQEQRLSRATGMTMDWQSAPASPSSLTVKRILRLEIPVDTYP 147
            +  N +   ++GW +  P E+ +  + G   +W ++P S S L  KR +R++IPVD YP
Sbjct: 124 GIFQN-ARADMNGWASQFPSERSVPSSPG--PNWLNSPGSSSGLIAKRTIRVDIPVDNYP 183

Query: 148 NFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHIL 207
           NFNFVGRLLGPRGNSLKRVE +T CRV IRG+GS+KDP KEE +RG+PGYEHLNEPLHIL
Sbjct: 184 NFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHIL 243

Query: 208 IEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSSFREDSPGPGGS 267
           +EA+LP  IVD RL QA+EI+++LL P++E+ D  K+QQLRELA+LN + RE+     GS
Sbjct: 244 VEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGS 303

Query: 268 VSPFNSSGMKRAKT 281
           VSP+NS GMKRAKT
Sbjct: 304 VSPYNSLGMKRAKT 312

[Close]

BLAST of CmoCh03G002890 vs. ExPASy TrEMBL
Match: A0A6J1GG96 (KH domain-containing protein At2g38610-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453879 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 3.7e-157
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240
           VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY
Sbjct: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240

Query: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of CmoCh03G002890 vs. ExPASy TrEMBL
Match: A0A6J1IM72 (KH domain-containing protein At2g38610-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478291 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.1e-156
Identity = 281/282 (99.65%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120
           VSGMMSNQGFCDLDRL+HRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLQHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240
           VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY
Sbjct: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240

Query: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of CmoCh03G002890 vs. ExPASy TrEMBL
Match: A0A6J1GH93 (KH domain-containing protein At2g38610-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453879 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 3.5e-155
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQE RLSRATGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQE-RLSRATGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240
           VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY
Sbjct: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240

Query: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of CmoCh03G002890 vs. ExPASy TrEMBL
Match: A0A6J1ISI3 (KH domain-containing protein At2g38610-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478291 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.0e-154
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120
           VSGMMSNQGFCDLDRL+HRSPSPMASSNLISNVSTTGLSGWNGLPQE RLSRATGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLQHRSPSPMASSNLISNVSTTGLSGWNGLPQE-RLSRATGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240
           VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY
Sbjct: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240

Query: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of CmoCh03G002890 vs. ExPASy TrEMBL
Match: A0A6J1EB88 (KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432543 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.2e-151
Identity = 271/282 (96.10%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMY TNFSPARTASPHIRTTPD DSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVS+ GLSGWNGLPQEQRLSR  GMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240
           +KDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDIRLRQAQEIIEELLKPVDES DY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSSFRE+SPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of CmoCh03G002890 vs. NCBI nr
Match: XP_022950933.1 (KH domain-containing protein At2g38610-like isoform X1 [Cucurbita moschata] >XP_023543333.1 KH domain-containing protein At2g38610-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.9 bits (1452), Expect = 7.7e-157
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240
           VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY
Sbjct: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240

Query: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of CmoCh03G002890 vs. NCBI nr
Match: XP_022978251.1 (KH domain-containing protein At2g38610-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 562.4 bits (1448), Expect = 2.2e-156
Identity = 281/282 (99.65%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120
           VSGMMSNQGFCDLDRL+HRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLQHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240
           VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY
Sbjct: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240

Query: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of CmoCh03G002890 vs. NCBI nr
Match: KAG7033700.1 (KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 557.4 bits (1435), Expect = 7.2e-155
Identity = 282/288 (97.92%), Postives = 282/288 (97.92%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60

Query: 61  --EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT
Sbjct: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288

[Close]

BLAST of CmoCh03G002890 vs. NCBI nr
Match: XP_022950934.1 (KH domain-containing protein At2g38610-like isoform X2 [Cucurbita moschata] >XP_023543334.1 KH domain-containing protein At2g38610-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6603519.1 KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 557.4 bits (1435), Expect = 7.2e-155
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQE RLSRATGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQE-RLSRATGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240
           VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY
Sbjct: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240

Query: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of CmoCh03G002890 vs. NCBI nr
Match: XP_022978253.1 (KH domain-containing protein At2g38610-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 555.8 bits (1431), Expect = 2.1e-154
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDW 120
           VSGMMSNQGFCDLDRL+HRSPSPMASSNLISNVSTTGLSGWNGLPQE RLSRATGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLQHRSPSPMASSNLISNVSTTGLSGWNGLPQE-RLSRATGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240
           VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY
Sbjct: 181 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 240

Query: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of CmoCh03G002890 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 451.4 bits (1160), Expect = 5.2e-127
Identity = 238/287 (82.93%), Postives = 255/287 (88.85%), Query Frame = 0


Query: 1   MSGMYGTN--FSPARTASPHIRTTPDGD-SQYLSELLAEHQKFGPFMQVLPICSRLLNQE 60
           MSG+Y  +  FSPAR ASP IR+TP+ D SQYL+ELLAEHQK  PFMQVLPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMT 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS TGL GWNGL QE RLS   GMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRG 180
           MDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDES 240
           KGS+KDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+IRLRQAQEIIEELLKPVDES
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 QDYIKRQQLRELAMLNS-SFREDSPGP--GGSVSPFNSSGMKRAKTG 282
           QD+IKRQQLRELA+LNS + RE+SPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of CmoCh03G002890 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 451.4 bits (1160), Expect = 5.2e-127
Identity = 238/287 (82.93%), Postives = 255/287 (88.85%), Query Frame = 0


Query: 1   MSGMYGTN--FSPARTASPHIRTTPDGD-SQYLSELLAEHQKFGPFMQVLPICSRLLNQE 60
           MSG+Y  +  FSPAR ASP IR+TP+ D SQYL+ELLAEHQK  PFMQVLPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMT 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS TGL GWNGL QE RLS   GMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRG 180
           MDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDES 240
           KGS+KDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+IRLRQAQEIIEELLKPVDES
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 QDYIKRQQLRELAMLNS-SFREDSPGP--GGSVSPFNSSGMKRAKTG 282
           QD+IKRQQLRELA+LNS + RE+SPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of CmoCh03G002890 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 451.4 bits (1160), Expect = 5.2e-127
Identity = 227/284 (79.93%), Postives = 250/284 (88.03%), Query Frame = 0


Query: 1   MSGMYG-TNFSPARTASPHIRT-TPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEI 60
           MSG+Y   NFSP+R ASP IRT + D DSQY+S+LLAEHQK GPFMQVLPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTM 120
            R++GMM NQGF D DRLRHRSPSPMAS NL+SNVS  GL GWNGLP E R+    GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           +WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQ 240
           GS+KDP+KEEKL+G+PGYEHLNE LHILIEADLP +IVDI+LRQAQEIIEEL+KPVDESQ
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 283
           DYIKRQQLRELA+LNS+ RE+SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 DYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of CmoCh03G002890 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 283.9 bits (725), Expect = 1.4e-76
Identity = 150/274 (54.74%), Postives = 194/274 (70.80%), Query Frame = 0


Query: 8   NFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILRVSGMMSN 67
           NFS    + P      +   +YLSELLAE  K  PF+ VLP   RL+NQEILRV+ ++ N
Sbjct: 43  NFSGGLRSQPSFLVEQE---KYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLEN 102

Query: 68  QGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGW-NGLPQEQRLSRATGMTMDWQSAPAS 127
                L + R   PSP+AS  +  N S   ++GW +  P E+ +S  +    +W ++P S
Sbjct: 103 A----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVS--SSPAPNWLNSPGS 162

Query: 128 PSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSVKDPDK 187
            S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GS+KDP K
Sbjct: 163 SSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIK 222

Query: 188 EEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQL 247
           E+ +RG+PGYEHLNEPLHIL+EA+LP  IVD RL QA+EI+++LL PV+E+ D+ K+QQL
Sbjct: 223 EDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQL 282

Query: 248 RELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKT 281
           RELA+LN S RE+     GS+SP+NS GMKRAKT
Sbjct: 283 RELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of CmoCh03G002890 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 281.6 bits (719), Expect = 7.1e-76
Identity = 146/254 (57.48%), Postives = 185/254 (72.83%), Query Frame = 0


Query: 28  QYLSELLAEHQKFGPFMQVLPICSRLLNQEILRVSGMMSNQGFCDLDRLRHRSPSPMASS 87
           +YLSELLAE  K  PF+ VLP   RLLNQEILRV+ ++ N        L H  PSP+AS 
Sbjct: 64  KYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASG 123

Query: 88  NLISNVSTTGLSGW-NGLPQEQRLSRATGMTMDWQSAPASPSSLTVKRILRLEIPVDTYP 147
            +  N +   ++GW +  P E+ +  + G   +W ++P S S L  KR +R++IPVD YP
Sbjct: 124 GIFQN-ARADMNGWASQFPSERSVPSSPG--PNWLNSPGSSSGLIAKRTIRVDIPVDNYP 183

Query: 148 NFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHIL 207
           NFNFVGRLLGPRGNSLKRVE +T CRV IRG+GS+KDP KEE +RG+PGYEHLNEPLHIL
Sbjct: 184 NFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHIL 243

Query: 208 IEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSSFREDSPGPGGS 267
           +EA+LP  IVD RL QA+EI+++LL P++E+ D  K+QQLRELA+LN + RE+     GS
Sbjct: 244 VEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGS 303

Query: 268 VSPFNSSGMKRAKT 281
           VSP+NS GMKRAKT
Sbjct: 304 VSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of CmoCh03G002890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVI3	7.3e-126	82.93	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q8GYR4	7.3e-126	79.93	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q75GR5	2.1e-112	72.79	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q0WLR1	2.0e-75	54.74	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q9FKT4	1.0e-74	57.48	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of CmoCh03G002890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GG96	3.7e-157	100.00	KH domain-containing protein At2g38610-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1IM72	1.1e-156	99.65	KH domain-containing protein At2g38610-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1GH93	3.5e-155	99.65	KH domain-containing protein At2g38610-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1ISI3	1.0e-154	99.29	KH domain-containing protein At2g38610-like isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1EB88	5.2e-151	96.10	KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita moschata OX=...	[more]

BLAST of CmoCh03G002890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950933.1	7.7e-157	100.00	KH domain-containing protein At2g38610-like isoform X1 [Cucurbita moschata] >XP_...	[more]
XP_022978251.1	2.2e-156	99.65	KH domain-containing protein At2g38610-like isoform X1 [Cucurbita maxima]	[more]
KAG7033700.1	7.2e-155	97.92	KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022950934.1	7.2e-155	99.65	KH domain-containing protein At2g38610-like isoform X2 [Cucurbita moschata] >XP_...	[more]
XP_022978253.1	2.1e-154	99.29	KH domain-containing protein At2g38610-like isoform X2 [Cucurbita maxima]	[more]

BLAST of CmoCh03G002890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38610.1	5.2e-127	82.93	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	5.2e-127	82.93	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	5.2e-127	79.93	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	1.4e-76	54.74	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	7.1e-76	57.48	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 132..232 e-value: 1.0E-5 score: 35.0
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 23..70 e-value: 2.0E-13 score: 49.8
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 149..185 e-value: 1.2E-4 score: 21.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 20..263 e-value: 3.5E-69 score: 234.9
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 139..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..282
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 2..282
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 137..257 e-value: 1.32412E-54 score: 170.888
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 2..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G002890.1	CmoCh03G002890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding