CmoCh03G002800 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh03G002800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionLEA_2 domain-containing protein
LocationCmo_Chr03: 4056201 .. 4056857 (+)
RNA-Seq ExpressionCmoCh03G002800
SyntenyCmoCh03G002800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCGCCTCCTCCTCCACCTCTACCTCAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGAAACCGCACGCTCCCGGAGTCGCCGCAACCTCTGCATCGGAGTCTCCGTCGCCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGACCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGCTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGGTTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGCCGAGGTGCCGATTCTGGCCGCGGAAATCGATGCAGGTCAGACCACGCAGATGAACATTACGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTTGTAGCCGGATCGATGCCGTTGAACGCGTACGCGAGAGTTTCAGGTAAGGTGAGGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACGTCGTGTGATTTCAGTATTAACATATCGGAGAGGAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTAA

mRNA sequence

ATGGAAGTCGCCTCCTCCTCCACCTCTACCTCAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGAAACCGCACGCTCCCGGAGTCGCCGCAACCTCTGCATCGGAGTCTCCGTCGCCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGACCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGCTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGGTTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGCCGAGGTGCCGATTCTGGCCGCGGAAATCGATGCAGGTCAGACCACGCAGATGAACATTACGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTTGTAGCCGGATCGATGCCGTTGAACGCGTACGCGAGAGTTTCAGGTAAGGTGAGGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACGTCGTGTGATTTCAGTATTAACATATCGGAGAGGAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTAA

Coding sequence (CDS)

ATGGAAGTCGCCTCCTCCTCCACCTCTACCTCAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGAAACCGCACGCTCCCGGAGTCGCCGCAACCTCTGCATCGGAGTCTCCGTCGCCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGACCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGCTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGGTTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGCCGAGGTGCCGATTCTGGCCGCGGAAATCGATGCAGGTCAGACCACGCAGATGAACATTACGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTTGTAGCCGGATCGATGCCGTTGAACGCGTACGCGAGAGTTTCAGGTAAGGTGAGGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACGTCGTGTGATTTCAGTATTAACATATCGGAGAGGAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTAA

Protein sequence

MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKVRILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Homology
BLAST of CmoCh03G002800 vs. ExPASy TrEMBL
Match: A0A6J1GFM4 (uncharacterized protein LOC111453494 OS=Cucurbita moschata OX=3662 GN=LOC111453494 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.1e-107
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmoCh03G002800 vs. ExPASy TrEMBL
Match: A0A6J1IR72 (uncharacterized protein LOC111477726 OS=Cucurbita maxima OX=3661 GN=LOC111477726 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.0e-101
Identity = 208/218 (95.41%), Postives = 211/218 (96.79%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTST IKDSKSTKSVVD TA SRSRRNLCIGVSV VAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITL+ADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELV EVPILAA+IDAGQTTQMNI LRILADRFVKTSTVFFDVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmoCh03G002800 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.0e-74
Identity = 152/219 (69.41%), Postives = 187/219 (85.39%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKS-VVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTV 60
           ME+ASSS S+SIKD KST+S      ARSR RRN CIG+S  +A++LL++++I+ILAFTV
Sbjct: 1   MEIASSS-SSSIKDPKSTQSAAAAAAARSRKRRNTCIGIS--IAILLLLIILIIILAFTV 60

Query: 61  FKPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNY 120
           FK KRPITT+NSV++ D D+SL++ R SVD N+TL+A +AITNPNKVGFSY NSTAF NY
Sbjct: 61  FKAKRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNY 120

Query: 121 RGELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGK 180
           RGELV E PI+A +IDAG+  +MNITL I+ADR +KT+TVF DVVAGSMPLN YAR+SGK
Sbjct: 121 RGELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGK 180

Query: 181 VRILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           V+ILGIFNIH+VSTTSCDF+++ISER + DQQCNYHTKI
Sbjct: 181 VKILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of CmoCh03G002800 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.5e-73
Identity = 149/218 (68.35%), Postives = 183/218 (83.94%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           ME+ASSS+S  IKD KST+S      RSR RRN CIG+S  +A++LL+++II+ILAFTVF
Sbjct: 1   MEIASSSSSL-IKDPKSTQSTAAAATRSRKRRNTCIGIS--IAILLLLIIIIIILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITT+NSV++ D D+SL++   SVD N+TL+AD+AITNPNKVGFSY NSTAF NYR
Sbjct: 61  KAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELV E PI+A +IDAG+  +MNITL I+ADR +KT+TVF D VAGSMPLN Y R+SGKV
Sbjct: 121 GELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           +ILGIFNIH+VS+TSCDF+++ISER I DQQCNYHTKI
Sbjct: 181 KILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of CmoCh03G002800 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.7e-64
Identity = 141/218 (64.68%), Postives = 173/218 (79.36%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           ME+ASS+T    KD KS         RSR RRN CIGVS  +A VLL++V+IVILAFTVF
Sbjct: 1   MEIASSTT----KDPKS--------IRSRRRRNTCIGVS--IATVLLLIVLIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITTINSV++ D D+SL++ R++V  NITL+ DV+ITNPNKVGFSYSNSTA  NYR
Sbjct: 61  KAKRPITTINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GEL+ E PI +  I+A Q+ +MNIT+ I+ADR +++STV  DVVAGSMPLN Y R+SGKV
Sbjct: 121 GELIGEAPIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           RILGIF I +VS+TSCDF+I+IS+R I DQQC+YHTKI
Sbjct: 181 RILGIFKIRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of CmoCh03G002800 vs. NCBI nr
Match: XP_022950379.1 (uncharacterized protein LOC111453494 [Cucurbita moschata])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmoCh03G002800 vs. NCBI nr
Match: KAG6603510.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033691.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 383.3 bits (983), Expect = 1.4e-102
Identity = 210/218 (96.33%), Postives = 213/218 (97.71%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTST IKDSKSTKSVVDETARSRSRR LCIGVSVAVAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSV RTSVDFNITLVADVAITNPNKVGFSYSNST FFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVF+DVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIHMVSTTSCDFSIN+SERNIKDQ+CNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218

BLAST of CmoCh03G002800 vs. NCBI nr
Match: XP_023544036.1 (uncharacterized protein LOC111803737 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.3 bits (978), Expect = 5.5e-102
Identity = 209/218 (95.87%), Postives = 212/218 (97.25%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTST IKD KSTKSVVDETARSRS  NLCIGVSVAVAVVL +VVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFD+SLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELV EVPILAA+IDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmoCh03G002800 vs. NCBI nr
Match: XP_022977374.1 (uncharacterized protein LOC111477726 [Cucurbita maxima])

HSP 1 Score: 379.4 bits (973), Expect = 2.1e-101
Identity = 208/218 (95.41%), Postives = 211/218 (96.79%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTST IKDSKSTKSVVD TA SRSRRNLCIGVSV VAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120
           KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITL+ADVAITNPNKVGFSYSNSTAFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180
           GELV EVPILAA+IDAGQTTQMNI LRILADRFVKTSTVFFDVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180

Query: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

BLAST of CmoCh03G002800 vs. NCBI nr
Match: XP_008463309.1 (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 8.2e-74
Identity = 152/219 (69.41%), Postives = 187/219 (85.39%), Query Frame = 0

Query: 1   MEVASSSTSTSIKDSKSTKS-VVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTV 60
           ME+ASSS S+SIKD KST+S      ARSR RRN CIG+S  +A++LL++++I+ILAFTV
Sbjct: 1   MEIASSS-SSSIKDPKSTQSAAAAAAARSRKRRNTCIGIS--IAILLLLIILIIILAFTV 60

Query: 61  FKPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNY 120
           FK KRPITT+NSV++ D D+SL++ R SVD N+TL+A +AITNPNKVGFSY NSTAF NY
Sbjct: 61  FKAKRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNY 120

Query: 121 RGELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGK 180
           RGELV E PI+A +IDAG+  +MNITL I+ADR +KT+TVF DVVAGSMPLN YAR+SGK
Sbjct: 121 RGELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGK 180

Query: 181 VRILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           V+ILGIFNIH+VSTTSCDF+++ISER + DQQCNYHTKI
Sbjct: 181 VKILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of CmoCh03G002800 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 91/205 (44.39%), Postives = 141/205 (68.78%), Query Frame = 0

Query: 15  SKSTKSVVDETARS-RSRRNLCIGVSVAVAVVLLVVVIIVILAFTVFKPKRPITTINSVS 74
           S  T+S    TA+  R +RN  I +   + ++LL+ ++IVILAFT+FKPKRP TTI+SV+
Sbjct: 31  SMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVT 90

Query: 75  IDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVAEVPILAAE 134
           +D    S++ +   V  N+TL  D+++ NPN++GFSY +S+A  NYRG+++ E P+ A  
Sbjct: 91  VDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANR 150

Query: 135 IDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKVRILGIFNIHMVST 194
           I A +T  +NITL ++ADR +  + +  DV+AG +PLN + +V+GKV +L IF I + S+
Sbjct: 151 IAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSS 210

Query: 195 TSCDFSINISERNIKDQQCNYHTKI 219
           +SCD SI++S+RN+  Q C Y TK+
Sbjct: 211 SSCDLSISVSDRNVTSQHCKYSTKL 235

BLAST of CmoCh03G002800 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-20
Identity = 69/209 (33.01%), Postives = 116/209 (55.50%), Query Frame = 0

Query: 9   STSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVFKPKRPITT 68
           +T +  S  + S +  T RSR+R    I V+   A  L++  I++ L FTVF+ K PI  
Sbjct: 13  ATILPVSDESASNIKNTHRSRNRIKCSICVT---ATSLILTTIVLTLVFTVFRVKDPIIK 72

Query: 69  INSVSIDDFDMSLSVVRTS----VDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELV 128
           +N V ++  D   SV  T+    +  NI+++ DV++ NPN   F YSN+T    Y+G LV
Sbjct: 73  MNGVMVNGLD---SVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLV 132

Query: 129 AEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVV-AGSMPLNAYARVSGKVRIL 188
            E   L  +    +T++MN+T+ I+ DR +    +  ++  +G + + +Y RV GKV+I+
Sbjct: 133 GEAHGLPGKARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIM 192

Query: 189 GIFNIHMVSTTSCDFSINISERNIKDQQC 213
           GI   H+    +C  ++NI+ + I+D  C
Sbjct: 193 GIVKKHVTVKMNCTMAVNITGQAIQDVDC 215

BLAST of CmoCh03G002800 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 55/190 (28.95%), Postives = 96/190 (50.53%), Query Frame = 0

Query: 30  SRRNLCIGVSVAVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVRTSVD 89
           S+R +C  VS  + V+ ++ +  +ILA  VFKPK PI    S ++D    ++S +   V 
Sbjct: 2   SKRRICCIVSGIIFVLFVIFMTALILA-QVFKPKHPILQTVSSTVDGISTNIS-LPYEVQ 61

Query: 90  FNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVAEVPILAAEIDAGQTTQMNITLRIL 149
            N TL  ++ + NPN   F Y        YR  LV  + + ++ + A  +  +   L + 
Sbjct: 62  LNFTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQ 121

Query: 150 ADRFV-KTSTVFFDVVAGSMPLNAYARVSGKVRILGIFNIHMVSTTSCDFSINISERNIK 209
            D+FV     +  DV+ G + +   A++ GK+ +LGIF I + S + C+  +      ++
Sbjct: 122 LDKFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVE 181

Query: 210 DQQCNYHTKI 219
           DQ C+  TK+
Sbjct: 182 DQVCDLKTKL 189

BLAST of CmoCh03G002800 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-10
Identity = 54/195 (27.69%), Postives = 96/195 (49.23%), Query Frame = 0

Query: 28  SRSRRNLCIGVSVAVAVVLLVVVIIVILA--FTVFKPKRPITTINSVSIDDFDMSLSVVR 87
           S+S  NL    S AVA + +V +II  L    TVF+P+ P  ++ SV +  F    SV  
Sbjct: 2   SKSCSNL---ASCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSF----SVAN 61

Query: 88  TSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVAEVPILAAEIDAGQTTQMNIT 147
           +SV F  +  +  A+ NPN+  FS+ N+     Y G  +    + A EI++G+T +M  T
Sbjct: 62  SSVSFTFSQFS--AVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLAT 121

Query: 148 LRILADRFVKTSTVFF--------DVVAGSMPLNAYARVSGKVRILGIFNIHMVSTTSCD 207
             + +      S+           D    ++ + +   ++G+VR+LG+F   + +  +C 
Sbjct: 122 FSVQSFPLAAASSSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCR 181

Query: 208 FSINISERNIKDQQC 213
            +I+ S+ +I   +C
Sbjct: 182 IAISSSDGSIVAVRC 187

BLAST of CmoCh03G002800 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 55.5 bits (132), Expect = 6.4e-08
Identity = 40/122 (32.79%), Postives = 67/122 (54.92%), Query Frame = 0

Query: 27  RSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVRT 86
           RS  R NL    +VA   +L+++V+++++ FTVFKPK P  ++N+V +  F +S +    
Sbjct: 9   RSSGRTNLA-SCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVSNNTA-- 68

Query: 87  SVDFNITLVADVAITNPNKVGFSYSNSTAFFNYRGELVAEVPILAAEIDAGQTTQMNITL 146
               N +    VA+ NPN+  FS+ +S+    Y G  V  + I A +ID+G+   M  T 
Sbjct: 69  ----NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAATF 123

Query: 147 RI 149
            +
Sbjct: 129 TV 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GFM46.1e-107100.00uncharacterized protein LOC111453494 OS=Cucurbita moschata OX=3662 GN=LOC1114534... [more]
A0A6J1IR721.0e-10195.41uncharacterized protein LOC111477726 OS=Cucurbita maxima OX=3661 GN=LOC111477726... [more]
A0A1S3CJB54.0e-7469.41uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=... [more]
A0A0A0L0941.5e-7368.35LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ... [more]
A0A6J1HS803.7e-6464.68uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106... [more]
Match NameE-valueIdentityDescription
XP_022950379.11.3e-106100.00uncharacterized protein LOC111453494 [Cucurbita moschata][more]
KAG6603510.11.4e-10296.33Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_023544036.15.5e-10295.87uncharacterized protein LOC111803737 [Cucurbita pepo subsp. pepo][more]
XP_022977374.12.1e-10195.41uncharacterized protein LOC111477726 [Cucurbita maxima][more]
XP_008463309.18.2e-7469.41PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT3G54200.11.2e-4344.39Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.13.3e-2033.01Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.11.2e-1428.95Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G23930.16.8e-1027.69Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.16.4e-0832.79Glycine-rich protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 98..185
e-value: 3.0E-9
score: 37.3
NoneNo IPR availableGENE3D2.60.40.1820coord: 51..200
e-value: 2.4E-9
score: 39.1
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 26..217
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 26..217
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 46..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G002800.1CmoCh03G002800.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane