CmoCh03G002610 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G002610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	B3 domain-containing protein At2g31420-like
Location	Cmo_Chr03: 3904558 .. 3905373 (+)
RNA-Seq Expression	CmoCh03G002610
Synteny	CmoCh03G002610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTCGTCTTCATCTCCGCCGGCGAAAACAGGAATTCACTCAGTCCAAATCTCACTCGCGACGGCGTTCAAGATCAAGATCAAGAAAGCGTCGAGGACGACGAACATCTTTCACTAATTAAGCGAAAGAGGAGTCCAAACAAACGAACTCCAAAGCGGCTCAAACTTTTAAAAGAAAGATCTCTTAAGCGCCCAATCGTCCAATCGATTGCTTCTCCAGTCCTCGAAGCATCAGCGGAACAACCGGACATCATATTCGACGCTGAAACCGAAAGCGATAGCGATGTGAATGACGATCTAGATGATTTATTGATCGGTTTTAAGCAGGATGTACACGAATTTGATAGGATATTAGCGGACGGTTTACCGCAGAATTACAAGAGTTTGATGATTTTCATGGGAGCGTCGTCGAAATCGAGCCCTAATTTTTTGCTGCAGAAGCGATTGAAGAAGGGAGATGTGGATGAACGGCGAAATCGGCTTGTGATTCCGCAGAGGAAGATGAGAAATAATTTTCTGGATCTGGAGGAGGAGGAGAAGTTGAACATGGAGAGATGGTGGATTGTGGAGGTCATCGAGCCGGATTGTTCTGTGAGTTTGATGACGCTGAGTAAATGGGAGACGCCGAGTGGGGCGGCGTATGTGTTCATCACGGAGTGGAATGGACTGGTGGAGAGAAATGAGTTGAAGGAAGGAGACTTGGTTCAGCTATGGAGTTTTCGAGTTCACGGCGGCGGCGACGACGACCATGGGAGGCTCTGCTTCATGCTTTTAGAGATATGTGAAGAAGGAGATGATGAAACTGATGCTTGA

mRNA sequence

ATGGGTGTCGTCTTCATCTCCGCCGGCGAAAACAGGAATTCACTCAGTCCAAATCTCACTCGCGACGGCGTTCAAGATCAAGATCAAGAAAGCGTCGAGGACGACGAACATCTTTCACTAATTAAGCGAAAGAGGAGTCCAAACAAACGAACTCCAAAGCGGCTCAAACTTTTAAAAGAAAGATCTCTTAAGCGCCCAATCGTCCAATCGATTGCTTCTCCAGTCCTCGAAGCATCAGCGGAACAACCGGACATCATATTCGACGCTGAAACCGAAAGCGATAGCGATGTGAATGACGATCTAGATGATTTATTGATCGGTTTTAAGCAGGATGTACACGAATTTGATAGGATATTAGCGGACGGTTTACCGCAGAATTACAAGAGTTTGATGATTTTCATGGGAGCGTCGTCGAAATCGAGCCCTAATTTTTTGCTGCAGAAGCGATTGAAGAAGGGAGATGTGGATGAACGGCGAAATCGGCTTGTGATTCCGCAGAGGAAGATGAGAAATAATTTTCTGGATCTGGAGGAGGAGGAGAAGTTGAACATGGAGAGATGGTGGATTGTGGAGGTCATCGAGCCGGATTGTTCTGTGAGTTTGATGACGCTGAGTAAATGGGAGACGCCGAGTGGGGCGGCGTATGTGTTCATCACGGAGTGGAATGGACTGGTGGAGAGAAATGAGTTGAAGGAAGGAGACTTGGTTCAGCTATGGAGTTTTCGAGTTCACGGCGGCGGCGACGACGACCATGGGAGGCTCTGCTTCATGCTTTTAGAGATATGTGAAGAAGGAGATGATGAAACTGATGCTTGA

Coding sequence (CDS)

ATGGGTGTCGTCTTCATCTCCGCCGGCGAAAACAGGAATTCACTCAGTCCAAATCTCACTCGCGACGGCGTTCAAGATCAAGATCAAGAAAGCGTCGAGGACGACGAACATCTTTCACTAATTAAGCGAAAGAGGAGTCCAAACAAACGAACTCCAAAGCGGCTCAAACTTTTAAAAGAAAGATCTCTTAAGCGCCCAATCGTCCAATCGATTGCTTCTCCAGTCCTCGAAGCATCAGCGGAACAACCGGACATCATATTCGACGCTGAAACCGAAAGCGATAGCGATGTGAATGACGATCTAGATGATTTATTGATCGGTTTTAAGCAGGATGTACACGAATTTGATAGGATATTAGCGGACGGTTTACCGCAGAATTACAAGAGTTTGATGATTTTCATGGGAGCGTCGTCGAAATCGAGCCCTAATTTTTTGCTGCAGAAGCGATTGAAGAAGGGAGATGTGGATGAACGGCGAAATCGGCTTGTGATTCCGCAGAGGAAGATGAGAAATAATTTTCTGGATCTGGAGGAGGAGGAGAAGTTGAACATGGAGAGATGGTGGATTGTGGAGGTCATCGAGCCGGATTGTTCTGTGAGTTTGATGACGCTGAGTAAATGGGAGACGCCGAGTGGGGCGGCGTATGTGTTCATCACGGAGTGGAATGGACTGGTGGAGAGAAATGAGTTGAAGGAAGGAGACTTGGTTCAGCTATGGAGTTTTCGAGTTCACGGCGGCGGCGACGACGACCATGGGAGGCTCTGCTTCATGCTTTTAGAGATATGTGAAGAAGGAGATGATGAAACTGATGCTTGA

Protein sequence

MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILADGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHGGGDDDHGRLCFMLLEICEEGDDETDA

Homology

[Close]

BLAST of CmoCh03G002610 vs. ExPASy Swiss-Prot
Match: Q5RM09 (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.0e-09
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = 0


Query: 130 LMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE-----EEKLN 189
           L +    +    P  +++K L   DVD R+NRL IP    ++N+FL L+E     E+++ 
Sbjct: 168 LQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRLIDEDEIT 227

Query: 190 MERWWIVEVIEPDCSVSL--MTLSKW--ETPSGAAY---VFITEWNGLVERNELKEGDLV 249
            E    V     D       M   +W   T SG++Y   V   EW+ +VE N LKEGD +
Sbjct: 228 NEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKI 287

Query: 250 QLWSFRVHGGGDDDHGRLCFMLL 260
            LWSFR        +  LCF L+
Sbjct: 288 SLWSFR-------SNDILCFALV 303

[Close]

BLAST of CmoCh03G002610 vs. ExPASy Swiss-Prot
Match: Q9LSF7 (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 39/130 (30.00%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFL----------DLEEEEKLNMERWWIVEVI 204
           + +K L   DV+  +NRL +P    +RN+FL          D++ ++K+ +       ++
Sbjct: 216 IFEKTLFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRIIDKDIKNDKKIGVG----AILV 275

Query: 205 EPDCSVSLMTLSKWETPSGAA-----YVFITEWNGLVERNELKEGDLVQLWSFRVHGGGD 259
           +  C    + L +WE    +      Y  I  WN +VE N LKEGD + LWSFR      
Sbjct: 276 DQRCKKWGVMLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKEGDNISLWSFR------ 334

[Close]

BLAST of CmoCh03G002610 vs. ExPASy Swiss-Prot
Match: Q9FLV7 (B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24050 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.1e-05
Identity = 40/113 (35.40%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE----EEKLNMERWWIVEVIEPD--C 204
           + +K L   DV+  +NRL +P    +RN+FL   E     E +N      V  I  D  C
Sbjct: 219 IFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDINNNNKIGVGAILVDQRC 278

Query: 205 SVSLMTLSKWETPSGA-----AYVFITEWNGLVERNELKEGDLVQLWSFRVHG 246
               + L +WE    +     +Y  I  WN +VE N LKEGD + LWSFR  G
Sbjct: 279 KKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFRCCG 331

[Close]

BLAST of CmoCh03G002610 vs. ExPASy Swiss-Prot
Match: Q9LRX6 (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.3e-04
Identity = 35/113 (30.97%), Postives = 56/113 (49.56%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE-----EEKLNMERWWIVEVIEPDCS 204
           + +K L   D++  +NRL +P    ++N+FL   E     E+  N ++  +  ++    S
Sbjct: 229 IFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRS 288

Query: 205 VSL-MTLSKWETPSGAA-----YVFITEWNGLVERNELKEGDLVQLWSFRVHG 246
           V   + L +WE    +      Y  I  WN +VE N LKEGD + +WSFR  G
Sbjct: 289 VKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRG 341

[Close]

BLAST of CmoCh03G002610 vs. ExPASy TrEMBL
Match: A0A6J1GF95 (B3 domain-containing protein At2g31420-like OS=Cucurbita moschata OX=3662 GN=LOC111453649 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.8e-148
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA 120
           RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA
Sbjct: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA 120

Query: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVHGGGDDDHGRLCFMLLEICEEGDDETDA 272
           FRVHGGGDDDHGRLCFMLLEICEEGDDETDA
Sbjct: 241 FRVHGGGDDDHGRLCFMLLEICEEGDDETDA 271

[Close]

BLAST of CmoCh03G002610 vs. ExPASy TrEMBL
Match: A0A6J1ITM1 (uncharacterized protein LOC111478299 OS=Cucurbita maxima OX=3661 GN=LOC111478299 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.4e-129
Identity = 248/273 (90.84%), Postives = 255/273 (93.41%), Query Frame = 0


Query: 1   MGVVFISAGENRNSLSPNLTRDGV--QDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLL 60
           MG+VFISAGEN NS SPNL  DGV  QDQDQESVEDDE LSLIKRKRSPNKRTPKRLKLL
Sbjct: 1   MGLVFISAGENMNSHSPNLISDGVQDQDQDQESVEDDERLSLIKRKRSPNKRTPKRLKLL 60

Query: 61  KERSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRI 120
           KERSLKRPIVQSIASPVLEASAEQPDIIFD ETESDSDV DDL DLLIGFKQDV+EFDRI
Sbjct: 61  KERSLKRPIVQSIASPVLEASAEQPDIIFDTETESDSDVKDDLGDLLIGFKQDVYEFDRI 120

Query: 121 LADGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE 180
           LADGL Q+YKSLMIFMGASS SSP+FLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE
Sbjct: 121 LADGLHQDYKSLMIFMGASSNSSPSFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE 180

Query: 181 EEKLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQL 240
           EEKLNMERWW+VEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDL+QL
Sbjct: 181 EEKLNMERWWMVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLIQL 240

Query: 241 WSFRVHGGGDDDHGRLCFMLLEICEEGDDETDA 272
           WSFRVHGG   DHGRLCFMLLEICE   DETD+
Sbjct: 241 WSFRVHGG---DHGRLCFMLLEICE--GDETDS 268

[Close]

BLAST of CmoCh03G002610 vs. ExPASy TrEMBL
Match: A0A0A0L012 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192190 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.6e-64
Identity = 134/243 (55.14%), Postives = 177/243 (72.84%), Query Frame = 0


Query: 28  DQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEASAEQP---D 87
           DQ   + D+HL LIKRKR+  K+  +R KL +E+ LKR ++  +  P+   S E+P   D
Sbjct: 28  DQNPSDQDDHLPLIKRKRTRMKQLARRHKLFREKRLKRQLIHPVDDPI-PKSKEEPRGKD 87

Query: 88  IIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILADGLPQNYKSLMIFMGASSKSSPNF 147
            +FD+ETES+SD + + + L+     ++ E ++   + +P  YK+LMIFMG S    P+ 
Sbjct: 88  FVFDSETESESDTDPNQETLIFRVLAEMVESEKDSLEIIPDEYKNLMIFMGGSWNFCPSL 147

Query: 148 LLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWIVEVIEPDCSVSLMTL 207
           +++KRLKKGDV+ERRNRL+IPQRK R NFLD+EEEE+LN + WW+VE+IEPDC+VSL+TL
Sbjct: 148 VMEKRLKKGDVEERRNRLLIPQRKTRTNFLDVEEEEQLNRDVWWMVEIIEPDCTVSLITL 207

Query: 208 SKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHGGGDDDHGRLCFMLLEICEE 267
           SKWET  G AYV ITEWNGLVERN+LKEGDL+QLWSFR  G    D GRLCFMLLE+ E 
Sbjct: 208 SKWETWKGVAYVLITEWNGLVERNDLKEGDLMQLWSFRAGG----DRGRLCFMLLEVEEI 265

[Close]

BLAST of CmoCh03G002610 vs. ExPASy TrEMBL
Match: A0A5A7SSE3 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold7305G00010 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 7.9e-64
Identity = 131/238 (55.04%), Postives = 171/238 (71.85%), Query Frame = 0


Query: 28  DQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEASAEQ--PDI 87
           DQ   +DD+HL LIKRKR+  K+  +R K  +E+ LKRP+   +  P+ ++  E    D+
Sbjct: 30  DQNPSDDDDHLPLIKRKRTRMKQLARRHKRDREKILKRPLKHPVNDPIPKSDEEPQGKDL 89

Query: 88  IFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILADGLPQNYKSLMIFMGASSKSSPNFL 147
           +FD ETES+ D + + + L      ++ E +R   + +P+ YK LMIFMG S    P+ +
Sbjct: 90  VFDTETESEGDADQNQETLTFMALAEIVESEREFLENIPEEYKKLMIFMGGSWDVCPSLV 149

Query: 148 LQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWIVEVIEPDCSVSLMTLS 207
           ++KRLKKGDV+ERRNRL+IPQRK R  FL++EEEEKLN + WW+VE+IEPDC+VSL+TLS
Sbjct: 150 MEKRLKKGDVEERRNRLLIPQRKTRTTFLEVEEEEKLNTDVWWMVEIIEPDCTVSLITLS 209

Query: 208 KWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHGGGDDDHGRLCFMLLEICE 264
           KWET  G AYV ITEWNGLVERN+LKEGDL+QLWSFR  GG     GRLCFMLLE+ E
Sbjct: 210 KWETRKGVAYVLITEWNGLVERNDLKEGDLMQLWSFRAGGG----RGRLCFMLLEVEE 263

[Close]

BLAST of CmoCh03G002610 vs. ExPASy TrEMBL
Match: A0A5D3C998 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00460 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 7.9e-64
Identity = 131/238 (55.04%), Postives = 171/238 (71.85%), Query Frame = 0


Query: 28  DQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKERSLKRPIVQSIASPVLEASAEQ--PDI 87
           DQ   +DD+HL LIKRKR+  K+  +R K  +E+ LKRP+   +  P+ ++  E    D+
Sbjct: 30  DQNPSDDDDHLPLIKRKRTRMKQLARRHKRDREKLLKRPLKHPVNDPIPKSDEEPQGKDL 89

Query: 88  IFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILADGLPQNYKSLMIFMGASSKSSPNFL 147
           +FD ETES+ D + + + L      ++ E +R   + +P+ YK LMIFMG S    P+ +
Sbjct: 90  VFDTETESEGDADQNQETLTFMALAEIVESEREFLENIPEEYKKLMIFMGGSWDVCPSLV 149

Query: 148 LQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWIVEVIEPDCSVSLMTLS 207
           ++KRLKKGDV+ERRNRL+IPQRK R  FL++EEEEKLN + WW+VE+IEPDC+VSL+TLS
Sbjct: 150 MEKRLKKGDVEERRNRLLIPQRKTRTTFLEVEEEEKLNTDVWWMVEIIEPDCTVSLITLS 209

Query: 208 KWETPSGAAYVFITEWNGLVERNELKEGDLVQLWSFRVHGGGDDDHGRLCFMLLEICE 264
           KWET  G AYV ITEWNGLVERN+LKEGDL+QLWSFR  GG     GRLCFMLLE+ E
Sbjct: 210 KWETRKGVAYVLITEWNGLVERNDLKEGDLMQLWSFRAGGG----RGRLCFMLLEVEE 263

[Close]

BLAST of CmoCh03G002610 vs. NCBI nr
Match: XP_022950597.1 (B3 domain-containing protein At2g31420-like [Cucurbita moschata])

HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA 120
           RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA
Sbjct: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA 120

Query: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVHGGGDDDHGRLCFMLLEICEEGDDETDA 272
           FRVHGGGDDDHGRLCFMLLEICEEGDDETDA
Sbjct: 241 FRVHGGGDDDHGRLCFMLLEICEEGDDETDA 271

[Close]

BLAST of CmoCh03G002610 vs. NCBI nr
Match: KAG7033674.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 522.3 bits (1344), Expect = 2.5e-144
Identity = 268/272 (98.53%), Postives = 268/272 (98.53%), Query Frame = 0


Query: 1   MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MGVVFISAGENRNSL PNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGVVFISAGENRNSLGPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA 120
           RSLKRPIVQSI SPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIG KQDVHEFDRILA
Sbjct: 61  RSLKRPIVQSIGSPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGCKQDVHEFDRILA 120

Query: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVHG-GGDDDHGRLCFMLLEICEEGDDETDA 272
           FRVHG GGDDDHGRLCFMLLEICEEGDDETDA
Sbjct: 241 FRVHGSGGDDDHGRLCFMLLEICEEGDDETDA 272

[Close]

BLAST of CmoCh03G002610 vs. NCBI nr
Match: KAG6603494.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 521.9 bits (1343), Expect = 3.2e-144
Identity = 267/272 (98.16%), Postives = 268/272 (98.53%), Query Frame = 0


Query: 1   MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MGVVFISAGENRNSL PNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGVVFISAGENRNSLGPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA 120
           RSLKRPI+QSI SPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIG KQDVHEFDRILA
Sbjct: 61  RSLKRPIIQSIGSPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGCKQDVHEFDRILA 120

Query: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVHG-GGDDDHGRLCFMLLEICEEGDDETDA 272
           FRVHG GGDDDHGRLCFMLLEICEEGDDETDA
Sbjct: 241 FRVHGSGGDDDHGRLCFMLLEICEEGDDETDA 272

[Close]

BLAST of CmoCh03G002610 vs. NCBI nr
Match: XP_023544949.1 (B3 domain-containing protein At2g31420-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.1 bits (1289), Expect = 5.9e-138
Identity = 257/273 (94.14%), Postives = 264/273 (96.70%), Query Frame = 0


Query: 1   MGVVFISAGENRNSLSPNLTRDGVQDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60
           MG+VFISAGEN NSLSPNLT DGVQDQD+ESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE
Sbjct: 1   MGLVFISAGENMNSLSPNLTSDGVQDQDRESVEDDEHLSLIKRKRSPNKRTPKRLKLLKE 60

Query: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRILA 120
           RSLKRPIVQSIASPVLEASAEQPDIIFDAETES+SDVNDDLDDLLIG KQDVHEFDRIL 
Sbjct: 61  RSLKRPIVQSIASPVLEASAEQPDIIFDAETESESDVNDDLDDLLIGCKQDVHEFDRILV 120

Query: 121 DGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180
           DGLPQ+YKSLMIFMGASS SSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE
Sbjct: 121 DGLPQDYKSLMIFMGASSNSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEE 180

Query: 181 KLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240
           KLNMERWW+VEVIEPDCSVSL+TLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS
Sbjct: 181 KLNMERWWMVEVIEPDCSVSLITLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQLWS 240

Query: 241 FRVH--GGGDDDHGRLCFMLLEICEEGDDETDA 272
           FRVH   GGD DHGRLCFMLLEICEEGDDETD+
Sbjct: 241 FRVHVGEGGDGDHGRLCFMLLEICEEGDDETDS 273

[Close]

BLAST of CmoCh03G002610 vs. NCBI nr
Match: XP_022978264.1 (uncharacterized protein LOC111478299 [Cucurbita maxima])

HSP 1 Score: 470.3 bits (1209), Expect = 1.1e-128
Identity = 248/273 (90.84%), Postives = 255/273 (93.41%), Query Frame = 0


Query: 1   MGVVFISAGENRNSLSPNLTRDGV--QDQDQESVEDDEHLSLIKRKRSPNKRTPKRLKLL 60
           MG+VFISAGEN NS SPNL  DGV  QDQDQESVEDDE LSLIKRKRSPNKRTPKRLKLL
Sbjct: 1   MGLVFISAGENMNSHSPNLISDGVQDQDQDQESVEDDERLSLIKRKRSPNKRTPKRLKLL 60

Query: 61  KERSLKRPIVQSIASPVLEASAEQPDIIFDAETESDSDVNDDLDDLLIGFKQDVHEFDRI 120
           KERSLKRPIVQSIASPVLEASAEQPDIIFD ETESDSDV DDL DLLIGFKQDV+EFDRI
Sbjct: 61  KERSLKRPIVQSIASPVLEASAEQPDIIFDTETESDSDVKDDLGDLLIGFKQDVYEFDRI 120

Query: 121 LADGLPQNYKSLMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE 180
           LADGL Q+YKSLMIFMGASS SSP+FLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE
Sbjct: 121 LADGLHQDYKSLMIFMGASSNSSPSFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEE 180

Query: 181 EEKLNMERWWIVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLVQL 240
           EEKLNMERWW+VEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDL+QL
Sbjct: 181 EEKLNMERWWMVEVIEPDCSVSLMTLSKWETPSGAAYVFITEWNGLVERNELKEGDLIQL 240

Query: 241 WSFRVHGGGDDDHGRLCFMLLEICEEGDDETDA 272
           WSFRVHGG   DHGRLCFMLLEICE   DETD+
Sbjct: 241 WSFRVHGG---DHGRLCFMLLEICE--GDETDS 268

[Close]

BLAST of CmoCh03G002610 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 62.8 bits (151), Expect = 5.0e-10
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = 0


Query: 130 LMIFMGASSKSSPNFLLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE-----EEKLN 189
           L +    +    P  +++K L   DVD R+NRL IP    ++N+FL L+E     E+++ 
Sbjct: 168 LQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRLIDEDEIT 227

Query: 190 MERWWIVEVIEPDCSVSL--MTLSKW--ETPSGAAY---VFITEWNGLVERNELKEGDLV 249
            E    V     D       M   +W   T SG++Y   V   EW+ +VE N LKEGD +
Sbjct: 228 NEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKI 287

Query: 250 QLWSFRVHGGGDDDHGRLCFMLL 260
            LWSFR        +  LCF L+
Sbjct: 288 SLWSFR-------SNDILCFALV 303

[Close]

BLAST of CmoCh03G002610 vs. TAIR 10
Match: AT5G24050.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-06
Identity = 40/113 (35.40%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE----EEKLNMERWWIVEVIEPD--C 204
           + +K L   DV+  +NRL +P    +RN+FL   E     E +N      V  I  D  C
Sbjct: 219 IFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDINNNNKIGVGAILVDQRC 278

Query: 205 SVSLMTLSKWETPSGA-----AYVFITEWNGLVERNELKEGDLVQLWSFRVHG 246
               + L +WE    +     +Y  I  WN +VE N LKEGD + LWSFR  G
Sbjct: 279 KKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFRCCG 331

[Close]

BLAST of CmoCh03G002610 vs. TAIR 10
Match: AT3G24850.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-05
Identity = 35/113 (30.97%), Postives = 56/113 (49.56%), Query Frame = 0


Query: 145 LLQKRLKKGDVDERRNRLVIP-QRKMRNNFLDLEE-----EEKLNMERWWIVEVIEPDCS 204
           + +K L   D++  +NRL +P    ++N+FL   E     E+  N ++  +  ++    S
Sbjct: 229 IFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRS 288

Query: 205 VSL-MTLSKWETPSGAA-----YVFITEWNGLVERNELKEGDLVQLWSFRVHG 246
           V   + L +WE    +      Y  I  WN +VE N LKEGD + +WSFR  G
Sbjct: 289 VKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRG 341

The following BLAST results are available for this feature:

BLAST of CmoCh03G002610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RM09	7.0e-09	33.57	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q9LSF7	1.2e-05	30.00	B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25...	[more]
Q9FLV7	2.1e-05	35.40	B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24...	[more]
Q9LRX6	2.3e-04	30.97	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh03G002610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GF95	6.8e-148	100.00	B3 domain-containing protein At2g31420-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1ITM1	5.4e-129	90.84	uncharacterized protein LOC111478299 OS=Cucurbita maxima OX=3661 GN=LOC111478299...	[more]
A0A0A0L012	3.6e-64	55.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192190 PE=4 SV=1	[more]
A0A5A7SSE3	7.9e-64	55.04	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3C998	7.9e-64	55.04	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of CmoCh03G002610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950597.1	1.4e-147	100.00	B3 domain-containing protein At2g31420-like [Cucurbita moschata]	[more]
KAG7033674.1	2.5e-144	98.53	B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6603494.1	3.2e-144	98.16	B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023544949.1	5.9e-138	94.14	B3 domain-containing protein At2g31420-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978264.1	1.1e-128	90.84	uncharacterized protein LOC111478299 [Cucurbita maxima]	[more]

BLAST of CmoCh03G002610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05920.1	5.0e-10	33.57	Domain of unknown function (DUF313)	[more]
AT5G24050.1	1.5e-06	35.40	Domain of unknown function (DUF313)	[more]
AT3G24850.1	1.7e-05	30.97	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 135..256 e-value: 2.8E-16 score: 61.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 141..243
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 128..226 e-value: 2.9E-9 score: 37.1
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 27..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..36
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 27..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G002610.1	CmoCh03G002610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding