CmoCh02G017700 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTTGTTCCTTCCTTTGATTTAAGGATGAAAATTGAGGCGAGTCTTGTCTCATCCATTGCAAGTTCAAGTGCAAGGCAGCATAGTAGTGCAGAGGTAAAGGAAGATATATCTAAACCATTAAGAGTCCTACTGCCTACTTGTTTGGAGGAGGTATATCCTAAGTTGCCAGATTCTCAACAGGTTTCAATGGAACGAGAACTGGTATCAAGGCCACTTGTTCATTCCAACCATTTACACTCTAGCAGTGGAGTAGTTGGCAATATATTTTCATCTTCTCCAGGGTTTTCAACAGATCTTCACTACTCATCCGTTTCGTTTTATGAAAACCAATCATCAACAAACCATCCTACTGGTGAAAATGTCAATTCCTGGTGTACGGATGCACTGCCAGATTTTCTGGAAGCTCCTGAAAATAACCCTGTTGGCAATAGTCACGTAGAAAACAATAGTTGCAGCTCTCTTATGGTTTCAGATGAATTCAGTAAAGAAAATGATTGGCAGGATTGGACAGATAGACTAATAACTGATGATTCATTGACTTCTAATTGGAGTGACCTTCTAGTGGATGCCAATGTTGCAGATTTGGAACCAAAGGTTGGAGTTCTTTCACAATACTCTGCATATTTTTGTCCATTTGACTGGCTTAATACTTCTAAGAGGGACTTATAATTGTTTTGGTCTTGTTGATTCCGCAGATAGCGTACCAAGCATCTAAACCAGTGATAAAAATGCAAGTGCAGCAGTCTCAAATTCAAAGTCAGCTTCCTTCTTCTGGGGAAATTTCTATGATTGCTACCTCAACTCCCTCTTCAAATGGAGCTCCCTCCAAGCCACGAATGCGATGGACACCAGAACTTCATGATGCATTTGTAGAGGCTGTAAACAAACTTGGTGGCAGTGAAAGTGTGTATTGCCCGCCTTCTTCACGTCCTGTCTTGATAATGGTTATTATATCTAAATGGCTTTACTATTTCATCTGTCAGGAGCTACTCCAAAAGGTGTTCTAAAGCTTATGCAAGTGGAGGGTTTGACAATCTATCATGTGAAGAGCCACTTGCAGGTATATTTACTTCTACATGAACGAGTTATAATGAAAAAAGAAAAAAAAGAAAAAAAAAAGATTCAGACATCAGTAATCTATATGAGCCGACCCGTTCTGCACTGTGTGCATATGTCCAAACATTTTTTGGGTAATAAGCAACTATTCATGTCTGAACATTCCTGTATTCGATACTTTAAATGACTATATGGCTTCTTGCTTGCAGAAATATAGGACGGCTAGATACCAACCAGAATCATCAAAAGGTATAGCAAATACTTATGATATCTGACTTAGGTTCTGCACTTTGTAATGCATGCAAAGTTTTACCCCTGTATTTAAGTTCAATAGTTAGATCAAGATGGCGCATATGATTTGATTTTGTTGGATACTCTGGATTTAAAAATTGAATGAATTTTCAATGCAGGGGCAATGGAGAAAAGCACCACCTCGCTTGAGGATATTTCATCCCTCGATTTGAAAACGTTAGTCAATTTTTTGGGTTTTATTTTTGGAAAATTTAAGTGTATGCAGTTTTATATGTTCAAGCATGGTTCAAAGGCTGGTGGCATTATCAGTTTGAGATTCTACGCATTTGTAGTTGGACTTGTTTGTTCAAGATGACTGAGACTTCTAAGCATAGTTGACTGGACTTATTTACTCATTTATTGCTTTATTAGCTCATTCATGATGGCTGTGATGTCTAGGCATATTTTGTTCACTTGTCTATGCATTTCTTGCTTTATGAGTTCATTCAAGAGGGTTGAGATTTCTAGGCATATTTAGTTGGACTTTTTTATTCCATCCTTCTTTGGTTTTTTTTTTTTTTTTTTTCCAATTATTCACTTTCTCTCAGAATGCCAAAAAGGATCAATATTCCCCTTAAACTATTTGTTAAACTAGCGGATTTACTGTTCACATGGGAATACTTTTAGGGTACATTTGTCTAGGAATTATTTTACTGGGGTCCTCAATGTTTACGTTCTTCTTGTGAACAACCAATTTTTCCGAAGTATAAAATGGGTTTCCTAGTATTGATCTGGCTTTGCATAGCAGGAGTATTGATATCACAGAGGCTCTACGTCTGCAGATGGAAGTTCAGAAAAAGTTACATGAGCAACTCGAGGTATGTATTTGTTACTTTGAACAGATTCTGCTGATCAATTGAGTTAAATCCTCTCCAGAAAGCGTGCCCCAAGGATTGGCAACGTGATAATTCTGATAAACTACCTTGAATTTAGCCACAAGAACTCACATGTTCGTTATAACCTTTTATTGATGATGTTAAATGCCTTTTTGTTTTACCCCGTTCAATGTAGTGAAATCTGATTTAGTCTCGACAGTTATGAAGTATGATGGGAAGGTCATGGGACTTCGGGTTATGAAAGAAAATATCAACATATTATAAGAGAGATGCTTTAATTTAGATAGCAGAAATTGCTAGTTGGAGCCTCTCCTTTATGATAATTTGCTTTAGGCAATCATGGAATTCGTTCCCAACGAAGCATTCCTTGTAAGGGTGTGAAAATCTCTCCCTAACATACGCGTTTTAAAAATCTTGAACGGAAGCCCGAAGGGAAAAGCCCAAAGCGGACAATATTTGCTAGCGGAGGGCTAGGGCCATTACAAATTATAAGTGAGATGTTTTAATTTTGATAGCAGAAATTGCTTGTTGGAGCCCCCCCTTTATGATAATTTGCTTTAGGCAATCATATAATACTCCTGTGTGCTTCATAAATTGTGAAAGAATGGTATATTTTTATTCTTTTGATGGTCTGGTAATAATGTGGATAACACACAAGTGCCTGGATTGATGGAGAGCTTAAGAACTGGTTAGTCCTTTATCAGATCAGTCTGTGTTTGATGAATTCTGGTAGATGGTGTGTGTGTGTGTGTGTTTGTGGTCTGATTTCATGTGATCATAACGCATTAGTCCCACATTTTTACGACGCCCCATCCCTCCATTTGGTATTTAACGATTGTGAGGTAATTCCTTTCTTGTTCGCTGTTTGACAGATCCAACGAAATTTACAGTTAAGAATAGAAGAACAAGGGAAGTACCTTCAAATGATGTTTGAAAAACAATGCAAGTCAGGCAATAACCTGAAAGCATCCACATTGGATGAGTCTCCATTTTCAGATACGGTTGATGATTTCTCTGCCAAAACAGAGCTGGAAACTTCCCAGGTGGAAATTTGCACAGCCCGCACTGATCCATGTGATGCTGACACAATATCCGAAAATGTTACTAACGTAGAAGGCGGGAAGCCAGAAGCTCGGAATAGAAAAGTCCCCGAAAATACCGAGCCAGACGTTTCAAAATCTAGCTCCCAGCTATCAAAGCGCCAAAGGACAGAGAATTAGGCTGTGCTGTTTCAGGTCTGTCTTCTTTGTATTGTCCAAAGTCATTACTGAATCTTGAAAATGCCAGTGTAGGTTGCGGGAAAGGGTAGGTACCTGGTTTTGGCTTTGAGTATCACTTAGGCATATTAGATATAAATGGTCTCACATTCTAGTTTATTAGCAAAGACTGAAATCCAAGTTTTGGTTACATCATTCTCCTGTACACAGAGATTGTACACTCAGTAGCAGCTTTAGTGCTGAGTTGATTTCAATATGCAACAGCAAGGGTTCTCTGTTAGAAATTGCTGTCAACATTTGTGTAATTCAACCAAAA ATGAAATTTGTTCCTTCCTTTGATTTAAGGATGAAAATTGAGGCGAGTCTTGTCTCATCCATTGCAAGTTCAAGTGCAAGGCAGCATAGTAGTGCAGAGGTTTCAATGGAACGAGAACTGGTATCAAGGCCACTTGTTCATTCCAACCATTTACACTCTAGCAGTGGAGTAGTTGGCAATATATTTTCATCTTCTCCAGGGTTTTCAACAGATCTTCACTACTCATCCGTTTCGTTTTATGAAAACCAATCATCAACAAACCATCCTACTGGTGAAAATGTCAATTCCTGGTGTACGGATGCACTGCCAGATTTTCTGGAAGCTCCTGAAAATAACCCTGTTGGCAATAGTCACGTAGAAAACAATAGTTGCAGCTCTCTTATGGTTTCAGATGAATTCAGTAAAGAAAATGATTGGCAGGATTGGACAGATAGACTAATAACTGATGATTCATTGACTTCTAATTGGAGTGACCTTCTAGTGGATGCCAATGTTGCAGATTTGGAACCAAAGATAGCGTACCAAGCATCTAAACCAGTGATAAAAATGCAAGTGCAGCAGTCTCAAATTCAAAGTCAGCTTCCTTCTTCTGGGGAAATTTCTATGATTGCTACCTCAACTCCCTCTTCAAATGGAGCTCCCTCCAAGCCACGAATGCGATGGACACCAGAACTTCATGATGCATTTGTAGAGGCTGTAAACAAACTTGGTGGCAGTGAAAGAGCTACTCCAAAAGGTGTTCTAAAGCTTATGCAAGTGGAGGGTTTGACAATCTATCATGTGAAGAGCCACTTGCAGAAATATAGGACGGCTAGATACCAACCAGAATCATCAAAAGGGGCAATGGAGAAAAGCACCACCTCGCTTGAGGATATTTCATCCCTCGATTTGAAAACGAGTATTGATATCACAGAGGCTCTACGTCTGCAGATGGAAGTTCAGAAAAAGTTACATGAGCAACTCGAGATCCAACGAAATTTACAGTTAAGAATAGAAGAACAAGGGAAGTACCTTCAAATGATGTTTGAAAAACAATGCAAGTCAGGCAATAACCTGAAAGCATCCACATTGGATGAGTCTCCATTTTCAGATACGGTTGATGATTTCTCTGCCAAAACAGAGCTGGAAACTTCCCAGGTGGAAATTTGCACAGCCCGCACTGATCCATGTGATGCTGACACAATATCCGAAAATGTTACTAACGTAGAAGGCGGGAAGCCAGAAGCTCGGAATAGAAAAGTCCCCGAAAATACCGAGCCAGACGTTTCAAAATCTAGCTCCCAGCTATCAAAGCGCCAAAGGACAGAGAATTAGGCTGTGCTGTTTCAGGTCTGTCTTCTTTGTATTGTCCAAAGTCATTACTGAATCTTGAAAATGCCAGTGTAGGTTGCGGGAAAGGGTAGGTACCTGGTTTTGGCTTTGAGTATCACTTAGGCATATTAGATATAAATGGTCTCACATTCTAGTTTATTAGCAAAGACTGAAATCCAAGTTTTGGTTACATCATTCTCCTGTACACAGAGATTGTACACTCAGTAGCAGCTTTAGTGCTGAGTTGATTTCAATATGCAACAGCAAGGGTTCTCTGTTAGAAATTGCTGTCAACATTTGTGTAATTCAACCAAAA ATGAAATTTGTTCCTTCCTTTGATTTAAGGATGAAAATTGAGGCGAGTCTTGTCTCATCCATTGCAAGTTCAAGTGCAAGGCAGCATAGTAGTGCAGAGGTTTCAATGGAACGAGAACTGGTATCAAGGCCACTTGTTCATTCCAACCATTTACACTCTAGCAGTGGAGTAGTTGGCAATATATTTTCATCTTCTCCAGGGTTTTCAACAGATCTTCACTACTCATCCGTTTCGTTTTATGAAAACCAATCATCAACAAACCATCCTACTGGTGAAAATGTCAATTCCTGGTGTACGGATGCACTGCCAGATTTTCTGGAAGCTCCTGAAAATAACCCTGTTGGCAATAGTCACGTAGAAAACAATAGTTGCAGCTCTCTTATGGTTTCAGATGAATTCAGTAAAGAAAATGATTGGCAGGATTGGACAGATAGACTAATAACTGATGATTCATTGACTTCTAATTGGAGTGACCTTCTAGTGGATGCCAATGTTGCAGATTTGGAACCAAAGATAGCGTACCAAGCATCTAAACCAGTGATAAAAATGCAAGTGCAGCAGTCTCAAATTCAAAGTCAGCTTCCTTCTTCTGGGGAAATTTCTATGATTGCTACCTCAACTCCCTCTTCAAATGGAGCTCCCTCCAAGCCACGAATGCGATGGACACCAGAACTTCATGATGCATTTGTAGAGGCTGTAAACAAACTTGGTGGCAGTGAAAGAGCTACTCCAAAAGGTGTTCTAAAGCTTATGCAAGTGGAGGGTTTGACAATCTATCATGTGAAGAGCCACTTGCAGAAATATAGGACGGCTAGATACCAACCAGAATCATCAAAAGGGGCAATGGAGAAAAGCACCACCTCGCTTGAGGATATTTCATCCCTCGATTTGAAAACGAGTATTGATATCACAGAGGCTCTACGTCTGCAGATGGAAGTTCAGAAAAAGTTACATGAGCAACTCGAGATCCAACGAAATTTACAGTTAAGAATAGAAGAACAAGGGAAGTACCTTCAAATGATGTTTGAAAAACAATGCAAGTCAGGCAATAACCTGAAAGCATCCACATTGGATGAGTCTCCATTTTCAGATACGGTTGATGATTTCTCTGCCAAAACAGAGCTGGAAACTTCCCAGGTGGAAATTTGCACAGCCCGCACTGATCCATGTGATGCTGACACAATATCCGAAAATGTTACTAACGTAGAAGGCGGGAAGCCAGAAGCTCGGAATAGAAAAGTCCCCGAAAATACCGAGCCAGACGTTTCAAAATCTAGCTCCCAGCTATCAAAGCGCCAAAGGACAGAGAATTAG MKFVPSFDLRMKIEASLVSSIASSSARQHSSAEVSMERELVSRPLVHSNHLHSSSGVVGNIFSSSPGFSTDLHYSSVSFYENQSSTNHPTGENVNSWCTDALPDFLEAPENNPVGNSHVENNSCSSLMVSDEFSKENDWQDWTDRLITDDSLTSNWSDLLVDANVADLEPKIAYQASKPVIKMQVQQSQIQSQLPSSGEISMIATSTPSSNGAPSKPRMRWTPELHDAFVEAVNKLGGSERATPKGVLKLMQVEGLTIYHVKSHLQKYRTARYQPESSKGAMEKSTTSLEDISSLDLKTSIDITEALRLQMEVQKKLHEQLEIQRNLQLRIEEQGKYLQMMFEKQCKSGNNLKASTLDESPFSDTVDDFSAKTELETSQVEICTARTDPCDADTISENVTNVEGGKPEARNRKVPENTEPDVSKSSSQLSKRQRTEN Homology
BLAST of CmoCh02G017700 vs. ExPASy Swiss-Prot
Match: Q94CL7 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=PHR1 PE=1 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.4e-78 Identity = 197/393 (50.13%), Postives = 251/393 (63.87%), Query Frame = 0
BLAST of CmoCh02G017700 vs. ExPASy Swiss-Prot
Match: F4J3P7 (Myb family transcription factor PHL13 OS=Arabidopsis thaliana OX=3702 GN=PHL13 PE=2 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 5.0e-65 Identity = 161/340 (47.35%), Postives = 205/340 (60.29%), Query Frame = 0
BLAST of CmoCh02G017700 vs. ExPASy Swiss-Prot
Match: B8B5N8 (Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. indica OX=39946 GN=PHR2 PE=3 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.4e-59 Identity = 174/389 (44.73%), Postives = 223/389 (57.33%), Query Frame = 0
BLAST of CmoCh02G017700 vs. ExPASy Swiss-Prot
Match: Q6Z156 (Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR2 PE=1 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.4e-59 Identity = 174/389 (44.73%), Postives = 223/389 (57.33%), Query Frame = 0
BLAST of CmoCh02G017700 vs. ExPASy Swiss-Prot
Match: Q8GUN5 (Protein PHR1-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=PHL1 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.6e-58 Identity = 164/374 (43.85%), Postives = 224/374 (59.89%), Query Frame = 0
BLAST of CmoCh02G017700 vs. ExPASy TrEMBL
Match: A0A6J1ETG1 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437396 PE=3 SV=1) HSP 1 Score: 828.6 bits (2139), Expect = 1.3e-236 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
BLAST of CmoCh02G017700 vs. ExPASy TrEMBL
Match: A0A6J1ESM8 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437396 PE=3 SV=1) HSP 1 Score: 813.1 bits (2099), Expect = 5.5e-232 Identity = 437/466 (93.78%), Postives = 437/466 (93.78%), Query Frame = 0
BLAST of CmoCh02G017700 vs. ExPASy TrEMBL
Match: A0A6J1K6Q9 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111491651 PE=3 SV=1) HSP 1 Score: 794.3 bits (2050), Expect = 2.6e-226 Identity = 427/460 (92.83%), Postives = 432/460 (93.91%), Query Frame = 0
BLAST of CmoCh02G017700 vs. ExPASy TrEMBL
Match: A0A6J1K8P2 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491651 PE=3 SV=1) HSP 1 Score: 793.5 bits (2048), Expect = 4.5e-226 Identity = 427/466 (91.63%), Postives = 433/466 (92.92%), Query Frame = 0
BLAST of CmoCh02G017700 vs. ExPASy TrEMBL
Match: A0A6J1KAQ4 (protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491651 PE=3 SV=1) HSP 1 Score: 780.4 bits (2014), Expect = 3.9e-222 Identity = 427/489 (87.32%), Postives = 433/489 (88.55%), Query Frame = 0
BLAST of CmoCh02G017700 vs. TAIR 10
Match: AT4G28610.1 (phosphate starvation response 1 ) HSP 1 Score: 295.0 bits (754), Expect = 9.6e-80 Identity = 197/393 (50.13%), Postives = 251/393 (63.87%), Query Frame = 0
BLAST of CmoCh02G017700 vs. TAIR 10
Match: AT3G04450.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 250.0 bits (637), Expect = 3.5e-66 Identity = 161/340 (47.35%), Postives = 205/340 (60.29%), Query Frame = 0
BLAST of CmoCh02G017700 vs. TAIR 10
Match: AT3G04450.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 250.0 bits (637), Expect = 3.5e-66 Identity = 161/340 (47.35%), Postives = 205/340 (60.29%), Query Frame = 0
BLAST of CmoCh02G017700 vs. TAIR 10
Match: AT5G29000.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 236.1 bits (601), Expect = 5.3e-62 Identity = 144/266 (54.14%), Postives = 189/266 (71.05%), Query Frame = 0
BLAST of CmoCh02G017700 vs. TAIR 10
Match: AT5G29000.3 (Homeodomain-like superfamily protein ) HSP 1 Score: 236.1 bits (601), Expect = 5.3e-62 Identity = 144/266 (54.14%), Postives = 189/266 (71.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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