CmoCh02G017600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G017600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Auxin-responsive protein
Location	Cmo_Chr02: 10070696 .. 10074378 (-)
RNA-Seq Expression	CmoCh02G017600
Synteny	CmoCh02G017600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCAATGCCGTTGCTTCAATATCAATCTCCATCTTCTTCATCACGCCACCACCATTAAACCTTCCTTCTCTCTCTTCCCCTTTCCTAATCTCTCCCAAACAAATCCTCCTCACCATTCACACGACATTGCTTTTTATTTGCTCGTTATTGTTAGTTGTTGTTGTTGACGTTGATTTTTTCATTTCCTTTCACTTCAAGACTTCGTTTCTGATCAACCCACTCCCTCCTTAAATCCCCCTTACCTCTGCTTCAATTTCTTCGTCTTCCTCTCTCATTACGGTTTAATCTAGTAATTTTCTGTGCTTTTTCAACGAGGAGCTGCTGTAATTTCTGAAGAATTTATGTCGACTGTTTCCAGAGATGAAAGCGTGGTGTTGTCTTCGGAAGACGAGTCTCCGGATGAATCTGAGATCGAATTGGGGCTAGGGCTCAGCCTCGGCGTTCGTGATTCGGCACACAAGATTCAGAAAGTTGCGATGCTTCAATTTGGGAAAATTTTAACGGCTGAGGATTTTCCTGCGTCGATCTCCTCTCACTCGTCTATGTCTTCGTCGAGCTCATCTGTTTGTTCCTCGTCGTGGCCTTGTGGATTCAGTGTCACTAATCGCTCGAAGATAAATTCTGATTCTGCAGCAACTACTAATGGCGGGAGGTATTGATTACTAATTCTTGCTGATGCCGAGGGATTTAGTGCGTAGTTGATTCGACCTTTTCTATGGTTTAACCAATTTTGTGAAGCATACGAATTTAATTTCTCTGATCGATCACTACTAGTTTTAGATTTGTCTATTAACACAGTTCTAACGCGATTTAATTACGGTCTCAATGGGTGATTATTGCCAATCGGACTTTCAAGTTTTTTTTTTGACTTTTGTGGCTCTCTTTCCGTCTTGTAACGGTCTATTATTACTCCCGTAGCTGTGAATTTGCATGTGTTTCTCTGGTTCTGCTTTTCAGTACACTATTGATTCGAATCTCTGAATATTTATTTTGATGAATCTGATACTGACAGATATGTTAGCTCTTGCTTCCTTTTATGGTTCCTCTGGTTCCCTCTTCCCCATCCCGAAAGCAAAACAGTAAGCTGAATATAGATAGGGAATCATTTTAAACATTTTCGGATTGACTTACTGCCGTACTTCATCTAATTAATATGATACGGCTGTGAATAAACTGAAAACTGGCCTTTGCTAGACTTCAAAGGATGAGATGCCCTGATATGATTAGACGGCACAGCCCTTTCAAATGTCTTTCTAATACTTGTCAAGTCGTCATGGTAATTTATTTGGTAGAACTTCAAGTTAACATTCAATAGGAGCGTAATTGCTACCTCATAACCTAAGAATTAGACTCATACATGTGAGATCACACATCGGTTAGAGAAGAGAGCAAAACACTTTTTACAAAGGTGTTGAAAACTCTCTCTAGCAGACTCGTTTTAAAACCTTGAGGGGAAACTCGAAAGGGAAAGCCCAAACAAGACAATATTTGCTAGCGGCGGACTTGAGCCGTTACAAATGGTATCAGAGTCAGGCACCGAACGGTGTTCCAGTAAGAACGTTGGCCCCCAAGGAGTAGAACGAACCATTCTTTATCAGGGTGTGTAAACCTCCATAGCAAACGTGTTTTAAAACCTTGAGGGGAAACTTTCTGGGAAAGTCCGGGAAAGTCCAAAGAGGACGCTTGCGTTGGGCTTTGACTGTTACAATCGACTCAAAAGAAAGTTCAAAACCCTTCAATTATCTTCATTTACCAGACATCAGAAAGTTAGGATTGGTTTGAGGCAATAAAGAAGGACGCATCAAATTTTTATTTTTCTGCCTCTTCTATGATCTCTGCGGCATTAACACCCTGCCAAACAAGAAGGATGAATGTGGAAAAGCTCGAACAGCTCCCATTGTAGCTTACAGGCCTTAGGGTCCGGATAAAACAAAAGACACTCTTCTTTCATTCCTCTTCTTTTTGTTTCCTTATCTGTTCTGGGTACAAATTGATTAAAATTACAATAGTCTTGCCAACAAATGTAATATTTTGATTTATTTTTCCAGAAGTAACCAGGTCGTGGGGTGGCCACCGATCAGAGCTTCTAGGATCAGTACCTTGGCTAACCAGGCAAAACCTCATTCTGTAGAAGGATTCAAGGCAGAAGCTGGCAAGAATAAAAACAAGCATACGGAGGCAGGGACACCTAATGGTGTTGGTGATAAACACAAAGCAAATGAAAAGAGTAGGAATTCCAGAAATTCTTTGTACGTGAAGGTTAATATGGATGGAGTTCTTATTGGAAGAAAGGTTAACCTCAGTGCTTACAGTAGCTACGAAACCTTGGCCCAAAAAGTAGAGAACATGTTCCTTGATCCCACTGCACTAGCTGATTCAACTGGTAATTCCTTTCTCGCCTCTGTAACTTCATGTTTATAAGTGAATTTTGTGTTGATGCTATCGTTTTGTCTGAATGAAATTAAGACAACCTTTTACTTAAAAGATCTTTAGGATTACTTTAAAGCTTCCTAAAGAAGGATAATGTTGAGAATGTCTGAAAGAACGGGTCTCTTCCTGAAGTAAATGCCAGTATTTTTGGATTGGATTCAACCATTTTCTTGAGGTTGGAGAGAAGCTTCTTATTATCAGTTGTGAGGCAAAAATTTCAACTCTTTTGGCAAAAATTTCAACCCTTATTAATTTATTGATGAATATGTGTTGTTCTAGAATCAATTCATGAAGGTAGATATTTTCTGTCTGGTAACCGATAATGACGCCTTTTCATCTGATACAGGATCAAGCATAAAGGAAAATGACATGGTGAGACCCTCCAGACTACTAAATGGACTATCCGAGTACATGCTTACTTACGAGGATCGGGATGGAGATTGGATGCTAGTTGGCGATGTTCCATGGGGGTACACGTCCTTTTCATTCTAATTCTTCTGATGAAATTTATAACACAATCTTCTGAACTAGATACTCTCAGTAACTCCAGTTTCTTGCAACTGTTTTAAGAGGGGTCTTCTATTTGTTTAATTTTTCTTTCGTGTATAAGTAATTTTGATTCTCTTTTGATCATATATCCAGAATGTTTACCAACTCCGTGAAGAGGCTTAGGATAATGAGAGCCGCTGAAGCTAATCAAATTGACAAGTGATCTGCCAGCAGGATTGGAAACTCACCAATTGAAGACGTTTCCTTTTTTCTTTTTTTTTTTTTTAGCACAACACCGATTCTCTGGTAAATTTGCAGCTATGGAGCAGCAAGAGAAAGGATTGGTATTTATATGAGCAAGGCCAATATGTATGGGACTGAGGCAGCCGATATAAGCTTGAAAACTGTGCAAAGGAGAAGAGGGAATAGGCGAAGTATTAAGAAAAGAAAAAAAAATTGACTTTCTTTTTTGGCTTTCTGATCTCGTTCCCCACAATTTGTGTATTTTTGAAGTCACTCACAGCCGTAAAGCCATGCACATTTGCCGATGTGGGAATGTTTATGCTCTAGTTTTCCTCTCCACCAATGGAGATTGGAGAGAAAATGCTGTGGTTATGTGTGTTTTGTAAACAGGTAAAGTTTTGAATTTCAATAAAATAAAATGATTACAATAATATGCTTGTATTGCTTATACATATATAGCTTGAAACTTCAAATATTATTTGTTATACAAGCCTTTCCATTTTCAGTTAATTCTAATGGC

mRNA sequence

AATCAATGCCGTTGCTTCAATATCAATCTCCATCTTCTTCATCACGCCACCACCATTAAACCTTCCTTCTCTCTCTTCCCCTTTCCTAATCTCTCCCAAACAAATCCTCCTCACCATTCACACGACATTGCTTTTTATTTGCTCGTTATTGTTAGTTGTTGTTGTTGACGTTGATTTTTTCATTTCCTTTCACTTCAAGACTTCGTTTCTGATCAACCCACTCCCTCCTTAAATCCCCCTTACCTCTGCTTCAATTTCTTCGTCTTCCTCTCTCATTACGGTTTAATCTAGTAATTTTCTGTGCTTTTTCAACGAGGAGCTGCTGTAATTTCTGAAGAATTTATGTCGACTGTTTCCAGAGATGAAAGCGTGGTGTTGTCTTCGGAAGACGAGTCTCCGGATGAATCTGAGATCGAATTGGGGCTAGGGCTCAGCCTCGGCGTTCGTGATTCGGCACACAAGATTCAGAAAGTTGCGATGCTTCAATTTGGGAAAATTTTAACGGCTGAGGATTTTCCTGCGTCGATCTCCTCTCACTCGTCTATGTCTTCGTCGAGCTCATCTGTTTGTTCCTCGTCGTGGCCTTGTGGATTCAGTGTCACTAATCGCTCGAAGATAAATTCTGATTCTGCAGCAACTACTAATGGCGGGAGAAGTAACCAGGTCGTGGGGTGGCCACCGATCAGAGCTTCTAGGATCAGTACCTTGGCTAACCAGGCAAAACCTCATTCTGTAGAAGGATTCAAGGCAGAAGCTGGCAAGAATAAAAACAAGCATACGGAGGCAGGGACACCTAATGGTGTTGGTGATAAACACAAAGCAAATGAAAAGAGTAGGAATTCCAGAAATTCTTTGTACGTGAAGGTTAATATGGATGGAGTTCTTATTGGAAGAAAGGTTAACCTCAGTGCTTACAGTAGCTACGAAACCTTGGCCCAAAAAGTAGAGAACATGTTCCTTGATCCCACTGCACTAGCTGATTCAACTGGATCAAGCATAAAGGAAAATGACATGGTGAGACCCTCCAGACTACTAAATGGACTATCCGAGTACATGCTTACTTACGAGGATCGGGATGGAGATTGGATGCTAGTTGGCGATGTTCCATGGGGAATGTTTACCAACTCCGTGAAGAGGCTTAGGATAATGAGAGCCGCTGAAGCTAATCAAATTGACAAGTGATCTGCCAGCAGGATTGGAAACTCACCAATTGAAGACGTTTCCTTTTTTCTTTTTTTTTTTTTTAGCACAACACCGATTCTCTGGTAAATTTGCAGCTATGGAGCAGCAAGAGAAAGGATTGGTATTTATATGAGCAAGGCCAATATGTATGGGACTGAGGCAGCCGATATAAGCTTGAAAACTGTGCAAAGGAGAAGAGGGAATAGGCGAAGTATTAAGAAAAGAAAAAAAAATTGACTTTCTTTTTTGGCTTTCTGATCTCGTTCCCCACAATTTGTGTATTTTTGAAGTCACTCACAGCCGTAAAGCCATGCACATTTGCCGATGTGGGAATGTTTATGCTCTAGTTTTCCTCTCCACCAATGGAGATTGGAGAGAAAATGCTGTGGTTATGTGTGTTTTGTAAACAGGTAAAGTTTTGAATTTCAATAAAATAAAATGATTACAATAATATGCTTGTATTGCTTATACATATATAGCTTGAAACTTCAAATATTATTTGTTATACAAGCCTTTCCATTTTCAGTTAATTCTAATGGC

Coding sequence (CDS)

ATGTCGACTGTTTCCAGAGATGAAAGCGTGGTGTTGTCTTCGGAAGACGAGTCTCCGGATGAATCTGAGATCGAATTGGGGCTAGGGCTCAGCCTCGGCGTTCGTGATTCGGCACACAAGATTCAGAAAGTTGCGATGCTTCAATTTGGGAAAATTTTAACGGCTGAGGATTTTCCTGCGTCGATCTCCTCTCACTCGTCTATGTCTTCGTCGAGCTCATCTGTTTGTTCCTCGTCGTGGCCTTGTGGATTCAGTGTCACTAATCGCTCGAAGATAAATTCTGATTCTGCAGCAACTACTAATGGCGGGAGAAGTAACCAGGTCGTGGGGTGGCCACCGATCAGAGCTTCTAGGATCAGTACCTTGGCTAACCAGGCAAAACCTCATTCTGTAGAAGGATTCAAGGCAGAAGCTGGCAAGAATAAAAACAAGCATACGGAGGCAGGGACACCTAATGGTGTTGGTGATAAACACAAAGCAAATGAAAAGAGTAGGAATTCCAGAAATTCTTTGTACGTGAAGGTTAATATGGATGGAGTTCTTATTGGAAGAAAGGTTAACCTCAGTGCTTACAGTAGCTACGAAACCTTGGCCCAAAAAGTAGAGAACATGTTCCTTGATCCCACTGCACTAGCTGATTCAACTGGATCAAGCATAAAGGAAAATGACATGGTGAGACCCTCCAGACTACTAAATGGACTATCCGAGTACATGCTTACTTACGAGGATCGGGATGGAGATTGGATGCTAGTTGGCGATGTTCCATGGGGAATGTTTACCAACTCCGTGAAGAGGCTTAGGATAATGAGAGCCGCTGAAGCTAATCAAATTGACAAGTGA

Protein sequence

MSTVSRDESVVLSSEDESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFPASISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRISTLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGVLIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLTYEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQIDK

Homology

[Close]

BLAST of CmoCh02G017600 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-38
Identity = 115/260 (44.23%), Postives = 154/260 (59.23%), Query Frame = 0


Query: 21  ESEIELGLGLSLGVRDSAHKIQKV----AMLQFGKILTAEDFPASISSHSSMSSSSSSVC 80
           ESE+ELGLGLSLG   +A KI K     A  + G++LTA+DFP   S  S  ++ S+S  
Sbjct: 11  ESELELGLGLSLG-GGTAAKIGKSGGGGAWGERGRLLTAKDFP---SVGSKRAADSASHA 70

Query: 81  SSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRISTLANQAKPHSVEGFKA 140
            SS P       RS              S+QVVGWPPI + R+++L N            
Sbjct: 71  GSSPP-------RS--------------SSQVVGWPPIGSHRMNSLVNN----------- 130

Query: 141 EAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSL-YVKVNMDGVLIGRKVNLSAYSSYE 200
           +A K+  +  EAG      D+ K   K  N +  + ++KVNMDGV IGRKV+L+A+SSYE
Sbjct: 131 QATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYE 190

Query: 201 TLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLTYEDRDGDWMLVGDVP 260
            LAQ +E+MF        + G+    +   +P RLL+G SE++LTYED++GDWMLVGDVP
Sbjct: 191 NLAQTLEDMF-----FRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVP 229

Query: 261 WGMFTNSVKRLRIMRAAEAN 276
           W MF NSVKRLR+M+ +EAN
Sbjct: 251 WRMFINSVKRLRVMKTSEAN 229

[Close]

BLAST of CmoCh02G017600 vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.8e-37
Identity = 114/257 (44.36%), Postives = 148/257 (57.59%), Query Frame = 0


Query: 19  PDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFPASISSHSSMSSSSSSVCSS 78
           P ESE+ELGLGLSLG           A  + G+ILTA+DFP   S  S  S+ SSS   +
Sbjct: 15  PAESELELGLGLSLG---------GGAWKERGRILTAKDFP---SVGSKRSAESSSHQGA 74

Query: 79  SWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRISTLANQAKPHSVEGFKAEA 138
           S P                      RS+QVVGWPPI   R+++L N     +++  +AE 
Sbjct: 75  SPP----------------------RSSQVVGWPPIGLHRMNSLVNN---QAMKAARAEE 134

Query: 139 GKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGVLIGRKVNLSAYSSYETLA 198
           G  + K  +      V    K N K +      +VKVNMDGV IGRKV++ A+SSYE LA
Sbjct: 135 GDGEKKVVKNDELKDV--SMKVNPKVQGLG---FVKVNMDGVGIGRKVDMRAHSSYENLA 194

Query: 199 QKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLTYEDRDGDWMLVGDVPWGM 258
           Q +E MF         TG++ +E   V+P RLL+G S+++LTYED++GDWMLVGDVPW M
Sbjct: 195 QTLEEMFF------GMTGTTCREK--VKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRM 221

Query: 259 FTNSVKRLRIMRAAEAN 276
           F NSVKRLRIM  +EA+
Sbjct: 255 FINSVKRLRIMGTSEAS 221

[Close]

BLAST of CmoCh02G017600 vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.2e-37
Identity = 115/277 (41.52%), Postives = 156/277 (56.32%), Query Frame = 0


Query: 2   STVSRDESVVLSSED-ESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFPA 61
           S +S DE++V+S ED  SP  +E+ELGL LSLG +   ++  +V                
Sbjct: 11  SALSNDENLVVSCEDSSSPIGNELELGLTLSLGRK--GYRDCRV---------------- 70

Query: 62  SISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRIS 121
             +  SS SSSSSS+  +S   G       K  +DS A T+G    QVVGWPPIR  R++
Sbjct: 71  -YADDSSSSSSSSSLSRASVIAGI------KRTADSMAATSG----QVVGWPPIRTYRMN 130

Query: 122 TLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGV 181
           ++ NQAK  + E    E  +  NK+                  S   RNS++VKV MDG+
Sbjct: 131 SMVNQAKASATEDPNLEISQAVNKN---------------RSDSTKMRNSMFVKVTMDGI 190

Query: 182 LIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKEND--MVRPSRLL-NGLSEY 241
            IGRK++L+A+  YE+L+  +E MFL P       GS   E D  M  P ++L +G S  
Sbjct: 191 PIGRKIDLNAHKCYESLSNTLEEMFLKP-----KLGSRTLETDGHMETPVKILPDGSSGL 238

Query: 242 MLTYEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEA 275
           +LTYED++GDWMLVGDVPWGMF  SV+RLRIM+ +EA
Sbjct: 251 VLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 238

[Close]

BLAST of CmoCh02G017600 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-33
Identity = 110/270 (40.74%), Postives = 144/270 (53.33%), Query Frame = 0


Query: 15  EDESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDF--PASISSHSSMSSSS 74
           E  + D+ E+ELGL L         K Q+       +ILTA D    A++S  SS+SSSS
Sbjct: 25  ESSAGDDEELELGLSL-------GSKKQQQQQHAPCRILTARDLQPAAALSPDSSVSSSS 84

Query: 75  SSVCSSSWPCGFSVTNRSKINSDSAATTNG-------GRSNQVVGWPPIRASRISTLANQ 134
                   P   +     +    +A T+ G         S  VVGWPPIR  R+++L NQ
Sbjct: 85  --------PAAAAAAGGKRAEGPTATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQ 144

Query: 135 AKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGVLIGRK 194
           AK ++ E           K T     +   DK +  +K R +    +VKVNMDG +IGRK
Sbjct: 145 AKENTSE--------TDTKKTATNESDVQKDKEEGEKKGRVAG---WVKVNMDGEVIGRK 204

Query: 195 VNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLTYEDRD 254
           V+L+A+ SY+TLA  +E MF  P     S G     N      +LL+  +EY LTYEDRD
Sbjct: 205 VDLNAHRSYKTLALALELMFTKP-----SIGLCASHN--TNSLKLLDNSAEYQLTYEDRD 261

Query: 255 GDWMLVGDVPWGMFTNSVKRLRIMRAAEAN 276
           GDWMLVGDVPW MF +SVKRLRIMR ++AN
Sbjct: 265 GDWMLVGDVPWEMFVSSVKRLRIMRTSDAN 261

[Close]

BLAST of CmoCh02G017600 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-33
Identity = 110/270 (40.74%), Postives = 144/270 (53.33%), Query Frame = 0


Query: 15  EDESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDF--PASISSHSSMSSSS 74
           E  + D+ E+ELGL L         K Q+       +ILTA D    A++S  SS+SSSS
Sbjct: 25  ESSAGDDEELELGLSL-------GSKKQQQQQHAPCRILTARDLQPAAALSPDSSVSSSS 84

Query: 75  SSVCSSSWPCGFSVTNRSKINSDSAATTNG-------GRSNQVVGWPPIRASRISTLANQ 134
                   P   +     +    +A T+ G         S  VVGWPPIR  R+++L NQ
Sbjct: 85  --------PAAAAAAGGKRAEGPTATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQ 144

Query: 135 AKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGVLIGRK 194
           AK ++ E           K T     +   DK +  +K R +    +VKVNMDG +IGRK
Sbjct: 145 AKENTSE--------TDTKKTATNESDVQKDKEEGEKKGRVAG---WVKVNMDGEVIGRK 204

Query: 195 VNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLTYEDRD 254
           V+L+A+ SY+TLA  +E MF  P     S G     N      +LL+  +EY LTYEDRD
Sbjct: 205 VDLNAHRSYKTLALALELMFTKP-----SIGLCASHN--TNSLKLLDNSAEYQLTYEDRD 261

Query: 255 GDWMLVGDVPWGMFTNSVKRLRIMRAAEAN 276
           GDWMLVGDVPW MF +SVKRLRIMR ++AN
Sbjct: 265 GDWMLVGDVPWEMFVSSVKRLRIMRTSDAN 261

[Close]

BLAST of CmoCh02G017600 vs. ExPASy TrEMBL
Match: A0A6J1ESV8 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437270 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.1e-148
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MSTVSRDESVVLSSEDESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFPA 60
           MSTVSRDESVVLSSEDESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFPA
Sbjct: 1   MSTVSRDESVVLSSEDESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFPA 60

Query: 61  SISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRIS 120
           SISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRIS
Sbjct: 61  SISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRIS 120

Query: 121 TLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGV 180
           TLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGV
Sbjct: 121 TLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGV 180

Query: 181 LIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLT 240
           LIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLT
Sbjct: 181 LIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLT 240

Query: 241 YEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQIDK 280
           YEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQIDK
Sbjct: 241 YEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQIDK 279

[Close]

BLAST of CmoCh02G017600 vs. ExPASy TrEMBL
Match: A0A6J1JYC5 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111490866 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.5e-147
Identity = 277/279 (99.28%), Postives = 278/279 (99.64%), Query Frame = 0


Query: 1   MSTVSRDESVVLSSEDESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFPA 60
           MSTVSRDESVVLSSEDESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKIL AE+FPA
Sbjct: 1   MSTVSRDESVVLSSEDESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILMAEEFPA 60

Query: 61  SISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRIS 120
           SISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRIS
Sbjct: 61  SISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRIS 120

Query: 121 TLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGV 180
           TLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGV
Sbjct: 121 TLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGV 180

Query: 181 LIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLT 240
           LIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLT
Sbjct: 181 LIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLT 240

Query: 241 YEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQIDK 280
           YEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQIDK
Sbjct: 241 YEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQIDK 279

[Close]

BLAST of CmoCh02G017600 vs. ExPASy TrEMBL
Match: A0A6J1DMX4 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111022706 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 9.8e-110
Identity = 220/280 (78.57%), Postives = 250/280 (89.29%), Query Frame = 0


Query: 1   MSTVSRDESVVLSSED-ESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFP 60
           MST+S+D+++V SSED  SPD+S+IELGLGL+L VRDS+ KIQKVAMLQF KILTA+DFP
Sbjct: 21  MSTISKDDNLVFSSEDSSSPDDSDIELGLGLTLRVRDSSRKIQKVAMLQFAKILTAQDFP 80

Query: 61  ASISSHSSMSSSSSSVCSSSWPCGFS--VTNRSKINSDSAATTNGGRSNQVVGWPPIRAS 120
           +SISSHSSMSSS+SSVCSSS  CG +   T RS   SDSAA TNGGRS+QVVGWPPIRAS
Sbjct: 81  SSISSHSSMSSSTSSVCSSSSLCGPNNVTTGRSNRISDSAAPTNGGRSSQVVGWPPIRAS 140

Query: 121 RISTLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNM 180
           RISTL NQAKP S E  K ++GKNK+KHTEAGT +GV +K+KAN++SRNSR+SL+VKVNM
Sbjct: 141 RISTLVNQAKPQSGEEVKVDSGKNKSKHTEAGTLDGVCEKNKANQESRNSRSSLFVKVNM 200

Query: 181 DGVLIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEY 240
           DGV IGRKVNLSA+ SYETLAQ +ENMFLDPTAL DS+GSSIKE D+VRPSRLLNGLSEY
Sbjct: 201 DGVPIGRKVNLSAHRSYETLAQTLENMFLDPTALVDSSGSSIKERDIVRPSRLLNGLSEY 260

Query: 241 MLTYEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQI 278
           MLTYEDR+GDWMLVGDVPWGMFTNSVKRLRIMRAAEAN+I
Sbjct: 261 MLTYEDREGDWMLVGDVPWGMFTNSVKRLRIMRAAEANRI 300

[Close]

BLAST of CmoCh02G017600 vs. ExPASy TrEMBL
Match: A0A6J1HRM2 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111466867 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 3.2e-108
Identity = 219/280 (78.21%), Postives = 240/280 (85.71%), Query Frame = 0


Query: 1   MSTVSRDESVVLSSEDES-PDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFP 60
           MST+ +DE+V+LSSE  S PDESEIELGLGLSLGVRDS  KIQKV++ QFG+ILTAEDF 
Sbjct: 16  MSTICKDENVMLSSEGSSCPDESEIELGLGLSLGVRDS-RKIQKVSIAQFGRILTAEDF- 75

Query: 61  ASISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRI 120
                       SSS+CSSS   G +VTN SK NSDSAAT NGGRS+QVVGWPPIRASRI
Sbjct: 76  ------------SSSICSSSSLSGVNVTNGSKRNSDSAATINGGRSSQVVGWPPIRASRI 135

Query: 121 STLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDG 180
           STL NQAKPHSVE FKA AGKNKNKHT AGT NGV D++KANE+SRNSRNS+YVKVNMDG
Sbjct: 136 STLVNQAKPHSVEEFKAVAGKNKNKHTAAGTLNGVSDRNKANEESRNSRNSVYVKVNMDG 195

Query: 181 VLIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYML 240
           VLIGRKVNLSA+SSYE LAQ +ENMFLDPTAL DSTGSSIKE+D+ RPSRLLNGLS YML
Sbjct: 196 VLIGRKVNLSAHSSYEALAQTIENMFLDPTALVDSTGSSIKEHDIARPSRLLNGLSGYML 255

Query: 241 TYEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQIDK 280
           TYEDR+GDWMLVGDVPWGMFT SVKRLRIM+AAEANQI +
Sbjct: 256 TYEDREGDWMLVGDVPWGMFTQSVKRLRIMKAAEANQIGR 281

[Close]

BLAST of CmoCh02G017600 vs. ExPASy TrEMBL
Match: A0A6J1HKN6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463887 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.6e-107
Identity = 218/280 (77.86%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MSTVSRDESVVLSSEDES-PDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFP 60
           MST+ +DE+V+LSSE  S PDESEIELGLGLSLGVRDS  KIQKV++ QFG+ILTAEDF 
Sbjct: 16  MSTICKDENVMLSSEGSSCPDESEIELGLGLSLGVRDS-RKIQKVSVAQFGRILTAEDF- 75

Query: 61  ASISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRI 120
                       SSS+CSSS   G +VTN SK NSDSAAT NGGR +QVVGWPPIRASRI
Sbjct: 76  ------------SSSICSSSSLSGVNVTNGSKRNSDSAATINGGRGSQVVGWPPIRASRI 135

Query: 121 STLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDG 180
           STL NQAK HSVE FKA AGKNKNKHTEAGT NGV D++KANE+ R SRNS+YVKVNMDG
Sbjct: 136 STLVNQAKSHSVEEFKAVAGKNKNKHTEAGTLNGVSDRNKANEERRTSRNSVYVKVNMDG 195

Query: 181 VLIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYML 240
           VLIGRKVNLSA+SSYETLAQ VENMFLDPTAL DSTGSSIKE+D+VRPSRLLNGLS YML
Sbjct: 196 VLIGRKVNLSAHSSYETLAQTVENMFLDPTALVDSTGSSIKEHDIVRPSRLLNGLSGYML 255

Query: 241 TYEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQIDK 280
           TYED++GDWMLVGDVPWGMFT SVKRLRIM+AAEANQI +
Sbjct: 256 TYEDKEGDWMLVGDVPWGMFTQSVKRLRIMKAAEANQIGR 281

[Close]

BLAST of CmoCh02G017600 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-41
Identity = 112/260 (43.08%), Postives = 153/260 (58.85%), Query Frame = 0


Query: 21  ESEIELGLGLSLGVRDSAHKIQKV----AMLQFGKILTAEDFPASISSHSSMSSSSSSVC 80
           ESE+ELGLGLSLG   +A KI K     A  + G++LTA+DFP                 
Sbjct: 11  ESELELGLGLSLG-GGTAAKIGKSGGGGAWGERGRLLTAKDFP----------------- 70

Query: 81  SSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRISTLANQAKPHSVEGFKA 140
                   SV ++   +S S A ++  RS+QVVGWPPI + R+++L N            
Sbjct: 71  --------SVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNN----------- 130

Query: 141 EAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSL-YVKVNMDGVLIGRKVNLSAYSSYE 200
           +A K+  +  EAG      D+ K   K  N +  + ++KVNMDGV IGRKV+L+A+SSYE
Sbjct: 131 QATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYE 190

Query: 201 TLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLTYEDRDGDWMLVGDVP 260
            LAQ +E+MF        + G+    +   +P RLL+G SE++LTYED++GDWMLVGDVP
Sbjct: 191 NLAQTLEDMF-----FRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVP 228

Query: 261 WGMFTNSVKRLRIMRAAEAN 276
           W MF NSVKRLR+M+ +EAN
Sbjct: 251 WRMFINSVKRLRVMKTSEAN 228

[Close]

BLAST of CmoCh02G017600 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-41
Identity = 112/260 (43.08%), Postives = 153/260 (58.85%), Query Frame = 0


Query: 21  ESEIELGLGLSLGVRDSAHKIQKV----AMLQFGKILTAEDFPASISSHSSMSSSSSSVC 80
           ESE+ELGLGLSLG   +A KI K     A  + G++LTA+DFP                 
Sbjct: 11  ESELELGLGLSLG-GGTAAKIGKSGGGGAWGERGRLLTAKDFP----------------- 70

Query: 81  SSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRISTLANQAKPHSVEGFKA 140
                   SV ++   +S S A ++  RS+QVVGWPPI + R+++L N            
Sbjct: 71  --------SVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNN----------- 130

Query: 141 EAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSL-YVKVNMDGVLIGRKVNLSAYSSYE 200
           +A K+  +  EAG      D+ K   K  N +  + ++KVNMDGV IGRKV+L+A+SSYE
Sbjct: 131 QATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYE 190

Query: 201 TLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLTYEDRDGDWMLVGDVP 260
            LAQ +E+MF        + G+    +   +P RLL+G SE++LTYED++GDWMLVGDVP
Sbjct: 191 NLAQTLEDMF-----FRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVP 228

Query: 261 WGMFTNSVKRLRIMRAAEAN 276
           W MF NSVKRLR+M+ +EAN
Sbjct: 251 WRMFINSVKRLRVMKTSEAN 228

[Close]

BLAST of CmoCh02G017600 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 115/260 (44.23%), Postives = 154/260 (59.23%), Query Frame = 0


Query: 21  ESEIELGLGLSLGVRDSAHKIQKV----AMLQFGKILTAEDFPASISSHSSMSSSSSSVC 80
           ESE+ELGLGLSLG   +A KI K     A  + G++LTA+DFP   S  S  ++ S+S  
Sbjct: 11  ESELELGLGLSLG-GGTAAKIGKSGGGGAWGERGRLLTAKDFP---SVGSKRAADSASHA 70

Query: 81  SSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRISTLANQAKPHSVEGFKA 140
            SS P       RS              S+QVVGWPPI + R+++L N            
Sbjct: 71  GSSPP-------RS--------------SSQVVGWPPIGSHRMNSLVNN----------- 130

Query: 141 EAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSL-YVKVNMDGVLIGRKVNLSAYSSYE 200
           +A K+  +  EAG      D+ K   K  N +  + ++KVNMDGV IGRKV+L+A+SSYE
Sbjct: 131 QATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYE 190

Query: 201 TLAQKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLTYEDRDGDWMLVGDVP 260
            LAQ +E+MF        + G+    +   +P RLL+G SE++LTYED++GDWMLVGDVP
Sbjct: 191 NLAQTLEDMF-----FRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVP 229

Query: 261 WGMFTNSVKRLRIMRAAEAN 276
           W MF NSVKRLR+M+ +EAN
Sbjct: 251 WRMFINSVKRLRVMKTSEAN 229

[Close]

BLAST of CmoCh02G017600 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-38
Identity = 114/257 (44.36%), Postives = 148/257 (57.59%), Query Frame = 0


Query: 19  PDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFPASISSHSSMSSSSSSVCSS 78
           P ESE+ELGLGLSLG           A  + G+ILTA+DFP   S  S  S+ SSS   +
Sbjct: 15  PAESELELGLGLSLG---------GGAWKERGRILTAKDFP---SVGSKRSAESSSHQGA 74

Query: 79  SWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRISTLANQAKPHSVEGFKAEA 138
           S P                      RS+QVVGWPPI   R+++L N     +++  +AE 
Sbjct: 75  SPP----------------------RSSQVVGWPPIGLHRMNSLVNN---QAMKAARAEE 134

Query: 139 GKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGVLIGRKVNLSAYSSYETLA 198
           G  + K  +      V    K N K +      +VKVNMDGV IGRKV++ A+SSYE LA
Sbjct: 135 GDGEKKVVKNDELKDV--SMKVNPKVQGLG---FVKVNMDGVGIGRKVDMRAHSSYENLA 194

Query: 199 QKVENMFLDPTALADSTGSSIKENDMVRPSRLLNGLSEYMLTYEDRDGDWMLVGDVPWGM 258
           Q +E MF         TG++ +E   V+P RLL+G S+++LTYED++GDWMLVGDVPW M
Sbjct: 195 QTLEEMFF------GMTGTTCREK--VKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRM 221

Query: 259 FTNSVKRLRIMRAAEAN 276
           F NSVKRLRIM  +EA+
Sbjct: 255 FINSVKRLRIMGTSEAS 221

[Close]

BLAST of CmoCh02G017600 vs. TAIR 10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-38
Identity = 116/281 (41.28%), Postives = 157/281 (55.87%), Query Frame = 0


Query: 2   STVSRDESVVLSSED-ESPDESEIELGLGLSLGVRDSAHKIQKVAMLQFGKILTAEDFPA 61
           S +S DE++V+S ED  SP  +E+ELGL LSLG +   ++  +V                
Sbjct: 11  SALSNDENLVVSCEDSSSPIGNELELGLTLSLGRK--GYRDCRV---------------- 70

Query: 62  SISSHSSMSSSSSSVCSSSWPCGFSVTNRSKINSDSAATTNGGRSNQVVGWPPIRASRIS 121
             +  SS SSSSSS+  +S   G       K  +DS A T+G    QVVGWPPIR  R++
Sbjct: 71  -YADDSSSSSSSSSLSRASVIAGI------KRTADSMAATSG----QVVGWPPIRTYRMN 130

Query: 122 TLANQAKPHSVEGFKAEAGKNKNKHTEAGTPNGVGDKHKANEKSRNSRNSLYVKVNMDGV 181
           ++ NQAK  + E    E  +  NK+                  S   RNS++VKV MDG+
Sbjct: 131 SMVNQAKASATEDPNLEISQAVNKN---------------RSDSTKMRNSMFVKVTMDGI 190

Query: 182 LIGRKVNLSAYSSYETLAQKVENMFLDPTALADSTGSSIKEND--MVRPSRLL-NGLSEY 241
            IGRK++L+A+  YE+L+  +E MFL P       GS   E D  M  P ++L +G S  
Sbjct: 191 PIGRKIDLNAHKCYESLSNTLEEMFLKP-----KLGSRTLETDGHMETPVKILPDGSSGL 242

Query: 242 MLTYEDRDGDWMLVGDVPWGMFTNSVKRLRIMRAAEANQID 279
           +LTYED++GDWMLVGDVPWGMF  SV+RLRIM+ +EA   D
Sbjct: 251 VLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKD 242

The following BLAST results are available for this feature:

BLAST of CmoCh02G017600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38831	1.5e-38	44.23	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
Q38830	4.8e-37	44.36	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=...	[more]
Q38829	8.2e-37	41.52	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]
A2XB18	2.5e-33	40.74	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]
Q0DWF2	2.5e-33	40.74	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]

BLAST of CmoCh02G017600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESV8	3.1e-148	100.00	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437270 PE=3 SV=1	[more]
A0A6J1JYC5	4.5e-147	99.28	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111490866 PE=3 SV=1	[more]
A0A6J1DMX4	9.8e-110	78.57	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111022706 PE=3 SV=...	[more]
A0A6J1HRM2	3.2e-108	78.21	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111466867 PE=3 SV=1	[more]
A0A6J1HKN6	4.6e-107	77.86	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463887 PE=3 SV=1	[more]

BLAST of CmoCh02G017600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33310.1	1.5e-41	43.08	auxin-induced protein 13	[more]
AT2G33310.3	1.5e-41	43.08	auxin-induced protein 13	[more]
AT2G33310.2	1.1e-39	44.23	auxin-induced protein 13	[more]
AT1G04550.2	3.4e-38	44.36	AUX/IAA transcriptional regulator family protein	[more]
AT4G28640.2	3.4e-38	41.28	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 89..276 e-value: 3.3E-56 score: 190.8
None	No IPR available	GENE3D	3.10.20.90		coord: 164..279 e-value: 1.8E-37 score: 129.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..167
None	No IPR available	PANTHER	PTHR31734:SF190	AUXIN-RESPONSIVE PROTEIN IAA11	coord: 10..275
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 161..269
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 10..275
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 170..273 score: 24.346092

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G017600.1	CmoCh02G017600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding