CmoCh02G016610 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G016610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein TORNADO 2-like
Location	Cmo_Chr02: 9561863 .. 9562791 (-)
RNA-Seq Expression	CmoCh02G016610
Synteny	CmoCh02G016610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTACTCCCACAAAACAACAGCCTCCCAGAAATGGCACTCATCAAAACAGTAATCGGAGCTATAAATTTCATAGCCATGCTCCTCTCCGTCCCCATCATCGGCGCCGGAATATGGCTGGCCACCCAACAAGACAATGCCTGCGTCCAAATCCTCCAATGGCCTATCATCTTTTTCGGCGTCATTGTCCTTATTGTTGCCGTCGCCGGCTTCATCGGAGCCTTCTGGCGCATCAGCTGGCTGCTGATTGTTTACCTCATCGCCATGCTGGTCCTCATTGTGCTTCTGGCTTGCTTGGTGGGTTTTATTTACATGGTCACCATTAGAGGGTCTGGGCATCTGGAGCCCAACCGGGCTTACTTGGAGTATCATCTGGATGACTTTTCTGGGTTTTTGAGGCACAGAGTTGAAAGCTCGTTTAAATGGGATTTGATTCGGAGCTGCTTGAGTTCTTCTAGTACATGTGGGCAGTTGAATCAGAGCTTTCGTATGGCTCAAGATTTCTTTAACGCTCCTATTTCTCCTCTCCAGGTATCTGTTTCGTGATATAGTAATTATGTAATAAAAGTTTTGATTAATTTTTTGTTTGTTTTTGTTTTTTAAGTCAGGATGCTGCAAGCCGCCGACGCTGTGTGGGTACACATTTGTGAACCCAACATACTGGATAATGCCGATAAACAATGCAGCCGACATGGACTGCTTGAAGTGGAACAACGATCAAACCCAGCTGTGTTATGGCTGTGACTCTTGCAAGGCAGGGTTGCTGGAGAGCTTGAAGAATCAATGGAGGAAGGCTGATATTGTGCTGCTCTTGGTGCTGGTTGCTCTCATTTCTGTGTATTTGATTGCTTGTTGTGCGTTTAAGAATGCGAAAACAGAGAAGCTGTTTGACAAATACAAGCAGGGCCGTGAAAGCCAAGGCTATGTCTGA

mRNA sequence

CTTACTCCCACAAAACAACAGCCTCCCAGAAATGGCACTCATCAAAACAGTAATCGGAGCTATAAATTTCATAGCCATGCTCCTCTCCGTCCCCATCATCGGCGCCGGAATATGGCTGGCCACCCAACAAGACAATGCCTGCGTCCAAATCCTCCAATGGCCTATCATCTTTTTCGGCGTCATTGTCCTTATTGTTGCCGTCGCCGGCTTCATCGGAGCCTTCTGGCGCATCAGCTGGCTGCTGATTGTTTACCTCATCGCCATGCTGGTCCTCATTGTGCTTCTGGCTTGCTTGGTGGGTTTTATTTACATGGTCACCATTAGAGGGTCTGGGCATCTGGAGCCCAACCGGGCTTACTTGGAGTATCATCTGGATGACTTTTCTGGGTTTTTGAGGCACAGAGTTGAAAGCTCGTTTAAATGGGATTTGATTCGGAGCTGCTTGAGTTCTTCTAGTACATGTGGGCAGTTGAATCAGAGCTTTCGTATGGCTCAAGATTTCTTTAACGCTCCTATTTCTCCTCTCCAGTCAGGATGCTGCAAGCCGCCGACGCTGTGTGGGTACACATTTGTGAACCCAACATACTGGATAATGCCGATAAACAATGCAGCCGACATGGACTGCTTGAAGTGGAACAACGATCAAACCCAGCTGTGTTATGGCTGTGACTCTTGCAAGGCAGGGTTGCTGGAGAGCTTGAAGAATCAATGGAGGAAGGCTGATATTGTGCTGCTCTTGGTGCTGGTTGCTCTCATTTCTGTGTATTTGATTGCTTGTTGTGCGTTTAAGAATGCGAAAACAGAGAAGCTGTTTGACAAATACAAGCAGGGCCGTGAAAGCCAAGGCTATGTCTGA

Coding sequence (CDS)

ATGGCACTCATCAAAACAGTAATCGGAGCTATAAATTTCATAGCCATGCTCCTCTCCGTCCCCATCATCGGCGCCGGAATATGGCTGGCCACCCAACAAGACAATGCCTGCGTCCAAATCCTCCAATGGCCTATCATCTTTTTCGGCGTCATTGTCCTTATTGTTGCCGTCGCCGGCTTCATCGGAGCCTTCTGGCGCATCAGCTGGCTGCTGATTGTTTACCTCATCGCCATGCTGGTCCTCATTGTGCTTCTGGCTTGCTTGGTGGGTTTTATTTACATGGTCACCATTAGAGGGTCTGGGCATCTGGAGCCCAACCGGGCTTACTTGGAGTATCATCTGGATGACTTTTCTGGGTTTTTGAGGCACAGAGTTGAAAGCTCGTTTAAATGGGATTTGATTCGGAGCTGCTTGAGTTCTTCTAGTACATGTGGGCAGTTGAATCAGAGCTTTCGTATGGCTCAAGATTTCTTTAACGCTCCTATTTCTCCTCTCCAGTCAGGATGCTGCAAGCCGCCGACGCTGTGTGGGTACACATTTGTGAACCCAACATACTGGATAATGCCGATAAACAATGCAGCCGACATGGACTGCTTGAAGTGGAACAACGATCAAACCCAGCTGTGTTATGGCTGTGACTCTTGCAAGGCAGGGTTGCTGGAGAGCTTGAAGAATCAATGGAGGAAGGCTGATATTGTGCTGCTCTTGGTGCTGGTTGCTCTCATTTCTGTGTATTTGATTGCTTGTTGTGCGTTTAAGAATGCGAAAACAGAGAAGCTGTTTGACAAATACAAGCAGGGCCGTGAAAGCCAAGGCTATGTCTGA

Protein sequence

MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGFIGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGFLRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTFVNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVALISVYLIACCAFKNAKTEKLFDKYKQGRESQGYV

Homology

[Close]

BLAST of CmoCh02G016610 vs. ExPASy Swiss-Prot
Match: Q9FIQ5 (Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 9.6e-107
Identity = 183/267 (68.54%), Postives = 222/267 (83.15%), Query Frame = 0


Query: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60
           M L   VIG INFI +LLS+P+IGAGIWLA    N+CV++LQWP+I  GV++L+V +AGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120
           IG FWRI+WLL+VYLIAML+LIVLL CLVGFIYMVTIRGSGH EP+RAYLEY L DFSG+
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF 180
           LR RV+ S+KW+ IR+CLS+++ C +LNQ + +AQDFFNA + P+QSGCCKPPT CG+TF
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 240
           VNPTYWI PI+ +ADMDCL W+NDQ  LCY CDSCKAGLL ++K  W KADI LLL L+ 
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query: 241 LISVYLIACCAFKNAKTEKLFDKYKQG 268
           LI VY+I CCAF+NA+TE +F KYKQG
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQG 267

[Close]

BLAST of CmoCh02G016610 vs. ExPASy Swiss-Prot
Match: Q9ZUN5 (Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-74
Identity = 137/268 (51.12%), Postives = 188/268 (70.15%), Query Frame = 0


Query: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60
           MAL   +   +N +A+L S+PI  +GIWLA++ DN CV +L+WP++  GV++L+V+  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120
           IGA+     LL VYL  M +LI LL  ++ F ++VT     +  P R Y EY L+ FS +
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFF-NAPISPLQSGCCKPPTLCGYT 180
           L+  V  S  W  +R+CL+ ++ C +LNQ F  A  FF ++ I+PLQSGCCKPPT CGY 
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLV 240
           FVNPT W+ P N AAD DC  W+NDQ+QLCY C+SCKAGLL +L+ +WRKA+++L++ +V
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 241 ALISVYLIACCAFKNAKTEKLFDKYKQG 268
            LI VY+IAC AF+NA+TE LF KYKQG
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQG 268

[Close]

BLAST of CmoCh02G016610 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.3e-58
Identity = 112/256 (43.75%), Postives = 170/256 (66.41%), Query Frame = 0


Query: 7   VIGAINFIAMLLSVPIIGAGIWLATQQDNA-CVQILQWPIIFFGVIVLIVAVAGFIGAFW 66
           +IG +NF+  LLS+PI+G GIWL+++ ++  C++ LQWP+I  G+ +++V++AGF GA +
Sbjct: 7   LIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAGACY 66

Query: 67  RISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGFLRHRV 126
           R  +L+ +YL+ ML++I  L   + F Y VT +GSG    NR YL+Y+L+D+SG+L+ RV
Sbjct: 67  RNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGWLKDRV 126

Query: 127 ESSFKWDLIRSCLSSSSTCGQLNQSF----RMAQDFFNAPISPLQSGCCKPPTLCGYTFV 186
                W  I SCL  S  C ++ ++F      A  FF   +SP++SGCCKPPT CG+++V
Sbjct: 127 SDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYV 186

Query: 187 NPTYWIMPINN-AADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 246
           N T W         + DC+ W+NDQ+ LCY C SCKAG+L SLK  WRK  ++ ++VL+ 
Sbjct: 187 NETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLII 246

Query: 247 LISVYLIACCAFKNAK 257
           L+  Y+IA  A++N K
Sbjct: 247 LVIFYVIAYAAYRNVK 262

[Close]

BLAST of CmoCh02G016610 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.7e-56
Identity = 110/256 (42.97%), Postives = 165/256 (64.45%), Query Frame = 0


Query: 7   VIGAINFIAMLLSVPIIGAGIWLATQQDNA-CVQILQWPIIFFGVIVLIVAVAGFIGAFW 66
           +IG INF   LLS+PI+G GIWL+++ ++  C++ LQWP+I  G+ ++++++AG  GA +
Sbjct: 7   LIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGACY 66

Query: 67  RISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGFLRHRV 126
           +  +L+ +YL  M  +I  L     F Y+VT +GSG    NR YL+Y+L+D+SG+L+ RV
Sbjct: 67  QNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKDRV 126

Query: 127 ESSFKWDLIRSCLSSSSTCGQLNQSF----RMAQDFFNAPISPLQSGCCKPPTLCGYTFV 186
             +  W  I SC+  S  C ++ +        A  F+   +SP++SGCCKPPT CGYT+V
Sbjct: 127 TDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYTYV 186

Query: 187 NPTYWIMPINNAA-DMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 246
           N T WI        + DC+ WNNDQ  LCY C SCKAG+L SLK  WRK  ++ ++V++ 
Sbjct: 187 NETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVII 246

Query: 247 LISVYLIACCAFKNAK 257
           L+  Y+IAC A++N K
Sbjct: 247 LVIFYVIACAAYQNVK 262

[Close]

BLAST of CmoCh02G016610 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.8e-55
Identity = 108/260 (41.54%), Postives = 162/260 (62.31%), Query Frame = 0


Query: 7   VIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGFIGAFWR 66
           ++G +NF+  LLS+PI+  GIWL+ +    C + L  P+I  GV +++VA+AG IG+  R
Sbjct: 8   LVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGSCCR 67

Query: 67  ISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGFLRHRVE 126
           ++WLL VYL  M +LI+L+ C+  F ++VT +G+G     + Y EY L D+S +L+ RVE
Sbjct: 68  VTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQKRVE 127

Query: 127 SSFKWDLIRSCLSSSSTCGQLNQSF--RMAQDFFNAPISPLQSGCCKPPTLCGYTFVNPT 186
           +   W+ IRSCL  S  C +L   F       F+   ++ LQSGCCKP   CG+ +VNPT
Sbjct: 128 NGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYVNPT 187

Query: 187 YWIMPINNA-ADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVALIS 246
            W         + DC  W+N + +LC+ C SCKAGLL+++K+ W+K  IV ++ LV LI 
Sbjct: 188 TWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLII 247

Query: 247 VYLIACCAFKNAKTEKLFDK 264
           VY + CCAF+N K +  + +
Sbjct: 248 VYSVGCCAFRNNKRDDSYSR 267

[Close]

BLAST of CmoCh02G016610 vs. ExPASy TrEMBL
Match: A0A6J1EYR1 (protein TORNADO 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437433 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 4.6e-152
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60
           MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF
Sbjct: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60

Query: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120
           IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF
Sbjct: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120

Query: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF 180
           LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF
Sbjct: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 240
           VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA
Sbjct: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 240

Query: 241 LISVYLIACCAFKNAKTEKLFDKYKQGRESQGYV 275
           LISVYLIACCAFKNAKTEKLFDKYKQGRESQGYV
Sbjct: 241 LISVYLIACCAFKNAKTEKLFDKYKQGRESQGYV 274

[Close]

BLAST of CmoCh02G016610 vs. ExPASy TrEMBL
Match: A0A6J1KA46 (protein TORNADO 2 OS=Cucurbita maxima OX=3661 GN=LOC111491491 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 9.5e-150
Identity = 270/274 (98.54%), Postives = 270/274 (98.54%), Query Frame = 0


Query: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60
           MAL KTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF
Sbjct: 1   MALTKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60

Query: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120
           IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF
Sbjct: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120

Query: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF 180
           LRHRVESSFKWDLIRSCLSSSS CGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF
Sbjct: 121 LRHRVESSFKWDLIRSCLSSSSMCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 240
           VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLL LVA
Sbjct: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLALVA 240

Query: 241 LISVYLIACCAFKNAKTEKLFDKYKQGRESQGYV 275
           LISVYLIACCAFKNAKTEKLFDKYKQGRE QGYV
Sbjct: 241 LISVYLIACCAFKNAKTEKLFDKYKQGRERQGYV 274

[Close]

BLAST of CmoCh02G016610 vs. ExPASy TrEMBL
Match: A0A5A7T5J8 (Protein TORNADO 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004550 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.8e-136
Identity = 238/274 (86.86%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60
           MAL KTV+GAINFIAM++S+PIIGAGIWLATQQDNACVQILQWP+I FGV+VL+VAVAGF
Sbjct: 1   MALNKTVMGAINFIAMVVSIPIIGAGIWLATQQDNACVQILQWPLIIFGVVVLLVAVAGF 60

Query: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120
           IGAF RI+WLLI YL+AML+LIVLL CLVGFIYMVTIRGSGHLEPNR+YLEYHL+DFSGF
Sbjct: 61  IGAFLRINWLLIAYLVAMLILIVLLGCLVGFIYMVTIRGSGHLEPNRSYLEYHLEDFSGF 120

Query: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF 180
           LRHRV+SSFKWDLIRSCLSSSS C +LNQSFR+AQDFF APISPLQSGCCKPPTLCGYTF
Sbjct: 121 LRHRVQSSFKWDLIRSCLSSSSMCAELNQSFRLAQDFFTAPISPLQSGCCKPPTLCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 240
           VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADI+LLL L+A
Sbjct: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 240

Query: 241 LISVYLIACCAFKNAKTEKLFDKYKQGRESQGYV 275
           L+SVYLIA C F+NAKT+KLFDKYKQG+  Q Y+
Sbjct: 241 LVSVYLIAACVFRNAKTQKLFDKYKQGQPPQPYI 274

[Close]

BLAST of CmoCh02G016610 vs. ExPASy TrEMBL
Match: A0A0A0LEA8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901690 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.8e-136
Identity = 239/274 (87.23%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60
           MAL KTV+GAINFIAM++S+PIIGAGIWLATQQDNACVQILQWP+I FGVIVL+VAVAGF
Sbjct: 1   MALNKTVMGAINFIAMVVSIPIIGAGIWLATQQDNACVQILQWPLIIFGVIVLLVAVAGF 60

Query: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120
           IGAF RI+WLLI YL+AML+LIVLL CLVGFIYMVTIRGSGHLEPNR+YLEYHL+DFSGF
Sbjct: 61  IGAFCRINWLLIAYLVAMLILIVLLGCLVGFIYMVTIRGSGHLEPNRSYLEYHLEDFSGF 120

Query: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF 180
           LRHRV+SSFKWDLIRSCLSSSS C +LNQSFR+AQDFF APISPLQSGCCKPPTLCGYTF
Sbjct: 121 LRHRVQSSFKWDLIRSCLSSSSMCAELNQSFRLAQDFFTAPISPLQSGCCKPPTLCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 240
           VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADI+LLL L+A
Sbjct: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 240

Query: 241 LISVYLIACCAFKNAKTEKLFDKYKQGRESQGYV 275
           LISVY+IA C F+NAKT+KLFDKYKQG+  Q Y+
Sbjct: 241 LISVYMIAACVFRNAKTQKLFDKYKQGQPPQPYI 274

[Close]

BLAST of CmoCh02G016610 vs. ExPASy TrEMBL
Match: A0A1S3CQH2 (protein TORNADO 2 OS=Cucumis melo OX=3656 GN=LOC103503551 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.8e-136
Identity = 238/274 (86.86%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60
           MAL KTV+GAINFIAM++S+PIIGAGIWLATQQDNACVQILQWP+I FGV+VL+VAVAGF
Sbjct: 1   MALNKTVMGAINFIAMVVSIPIIGAGIWLATQQDNACVQILQWPLIIFGVVVLLVAVAGF 60

Query: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120
           IGAF RI+WLLI YL+AML+LIVLL CLVGFIYMVTIRGSGHLEPNR+YLEYHL+DFSGF
Sbjct: 61  IGAFLRINWLLIAYLVAMLILIVLLGCLVGFIYMVTIRGSGHLEPNRSYLEYHLEDFSGF 120

Query: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF 180
           LRHRV+SSFKWDLIRSCLSSSS C +LNQSFR+AQDFF APISPLQSGCCKPPTLCGYTF
Sbjct: 121 LRHRVQSSFKWDLIRSCLSSSSMCAELNQSFRLAQDFFTAPISPLQSGCCKPPTLCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 240
           VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADI+LLL L+A
Sbjct: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 240

Query: 241 LISVYLIACCAFKNAKTEKLFDKYKQGRESQGYV 275
           L+SVYLIA C F+NAKT+KLFDKYKQG+  Q Y+
Sbjct: 241 LVSVYLIAACVFRNAKTQKLFDKYKQGQPPQPYI 274

[Close]

BLAST of CmoCh02G016610 vs. TAIR 10
Match: AT5G46700.1 (Tetraspanin family protein )

HSP 1 Score: 387.9 bits (995), Expect = 6.8e-108
Identity = 183/267 (68.54%), Postives = 222/267 (83.15%), Query Frame = 0


Query: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60
           M L   VIG INFI +LLS+P+IGAGIWLA    N+CV++LQWP+I  GV++L+V +AGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120
           IG FWRI+WLL+VYLIAML+LIVLL CLVGFIYMVTIRGSGH EP+RAYLEY L DFSG+
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFFNAPISPLQSGCCKPPTLCGYTF 180
           LR RV+ S+KW+ IR+CLS+++ C +LNQ + +AQDFFNA + P+QSGCCKPPT CG+TF
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 240
           VNPTYWI PI+ +ADMDCL W+NDQ  LCY CDSCKAGLL ++K  W KADI LLL L+ 
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query: 241 LISVYLIACCAFKNAKTEKLFDKYKQG 268
           LI VY+I CCAF+NA+TE +F KYKQG
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQG 267

[Close]

BLAST of CmoCh02G016610 vs. TAIR 10
Match: AT2G19580.1 (tetraspanin2 )

HSP 1 Score: 280.4 bits (716), Expect = 1.5e-75
Identity = 137/268 (51.12%), Postives = 188/268 (70.15%), Query Frame = 0


Query: 1   MALIKTVIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGF 60
           MAL   +   +N +A+L S+PI  +GIWLA++ DN CV +L+WP++  GV++L+V+  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAFWRISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGF 120
           IGA+     LL VYL  M +LI LL  ++ F ++VT     +  P R Y EY L+ FS +
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRHRVESSFKWDLIRSCLSSSSTCGQLNQSFRMAQDFF-NAPISPLQSGCCKPPTLCGYT 180
           L+  V  S  W  +R+CL+ ++ C +LNQ F  A  FF ++ I+PLQSGCCKPPT CGY 
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLV 240
           FVNPT W+ P N AAD DC  W+NDQ+QLCY C+SCKAGLL +L+ +WRKA+++L++ +V
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 241 ALISVYLIACCAFKNAKTEKLFDKYKQG 268
            LI VY+IAC AF+NA+TE LF KYKQG
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQG 268

[Close]

BLAST of CmoCh02G016610 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 225.3 bits (573), Expect = 5.9e-59
Identity = 112/256 (43.75%), Postives = 170/256 (66.41%), Query Frame = 0


Query: 7   VIGAINFIAMLLSVPIIGAGIWLATQQDNA-CVQILQWPIIFFGVIVLIVAVAGFIGAFW 66
           +IG +NF+  LLS+PI+G GIWL+++ ++  C++ LQWP+I  G+ +++V++AGF GA +
Sbjct: 7   LIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAGACY 66

Query: 67  RISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGFLRHRV 126
           R  +L+ +YL+ ML++I  L   + F Y VT +GSG    NR YL+Y+L+D+SG+L+ RV
Sbjct: 67  RNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGWLKDRV 126

Query: 127 ESSFKWDLIRSCLSSSSTCGQLNQSF----RMAQDFFNAPISPLQSGCCKPPTLCGYTFV 186
                W  I SCL  S  C ++ ++F      A  FF   +SP++SGCCKPPT CG+++V
Sbjct: 127 SDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYV 186

Query: 187 NPTYWIMPINN-AADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 246
           N T W         + DC+ W+NDQ+ LCY C SCKAG+L SLK  WRK  ++ ++VL+ 
Sbjct: 187 NETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLII 246

Query: 247 LISVYLIACCAFKNAK 257
           L+  Y+IA  A++N K
Sbjct: 247 LVIFYVIAYAAYRNVK 262

[Close]

BLAST of CmoCh02G016610 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 218.8 bits (556), Expect = 5.5e-57
Identity = 110/256 (42.97%), Postives = 165/256 (64.45%), Query Frame = 0


Query: 7   VIGAINFIAMLLSVPIIGAGIWLATQQDNA-CVQILQWPIIFFGVIVLIVAVAGFIGAFW 66
           +IG INF   LLS+PI+G GIWL+++ ++  C++ LQWP+I  G+ ++++++AG  GA +
Sbjct: 7   LIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGACY 66

Query: 67  RISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGFLRHRV 126
           +  +L+ +YL  M  +I  L     F Y+VT +GSG    NR YL+Y+L+D+SG+L+ RV
Sbjct: 67  QNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKDRV 126

Query: 127 ESSFKWDLIRSCLSSSSTCGQLNQSF----RMAQDFFNAPISPLQSGCCKPPTLCGYTFV 186
             +  W  I SC+  S  C ++ +        A  F+   +SP++SGCCKPPT CGYT+V
Sbjct: 127 TDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYTYV 186

Query: 187 NPTYWIMPINNAA-DMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVA 246
           N T WI        + DC+ WNNDQ  LCY C SCKAG+L SLK  WRK  ++ ++V++ 
Sbjct: 187 NETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVII 246

Query: 247 LISVYLIACCAFKNAK 257
           L+  Y+IAC A++N K
Sbjct: 247 LVIFYVIACAAYQNVK 262

[Close]

BLAST of CmoCh02G016610 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 216.5 bits (550), Expect = 2.7e-56
Identity = 108/260 (41.54%), Postives = 162/260 (62.31%), Query Frame = 0


Query: 7   VIGAINFIAMLLSVPIIGAGIWLATQQDNACVQILQWPIIFFGVIVLIVAVAGFIGAFWR 66
           ++G +NF+  LLS+PI+  GIWL+ +    C + L  P+I  GV +++VA+AG IG+  R
Sbjct: 8   LVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGSCCR 67

Query: 67  ISWLLIVYLIAMLVLIVLLACLVGFIYMVTIRGSGHLEPNRAYLEYHLDDFSGFLRHRVE 126
           ++WLL VYL  M +LI+L+ C+  F ++VT +G+G     + Y EY L D+S +L+ RVE
Sbjct: 68  VTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQKRVE 127

Query: 127 SSFKWDLIRSCLSSSSTCGQLNQSF--RMAQDFFNAPISPLQSGCCKPPTLCGYTFVNPT 186
           +   W+ IRSCL  S  C +L   F       F+   ++ LQSGCCKP   CG+ +VNPT
Sbjct: 128 NGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYVNPT 187

Query: 187 YWIMPINNA-ADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIVLLLVLVALIS 246
            W         + DC  W+N + +LC+ C SCKAGLL+++K+ W+K  IV ++ LV LI 
Sbjct: 188 TWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLII 247

Query: 247 VYLIACCAFKNAKTEKLFDK 264
           VY + CCAF+N K +  + +
Sbjct: 248 VYSVGCCAFRNNKRDDSYSR 267

The following BLAST results are available for this feature:

BLAST of CmoCh02G016610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIQ5	9.6e-107	68.54	Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1	[more]
Q9ZUN5	2.2e-74	51.12	Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1	[more]
Q9M1E7	8.3e-58	43.75	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	7.7e-56	42.97	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]
Q8S8Q6	3.8e-55	41.54	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]

BLAST of CmoCh02G016610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYR1	4.6e-152	100.00	protein TORNADO 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437433 PE=4 SV=1	[more]
A0A6J1KA46	9.5e-150	98.54	protein TORNADO 2 OS=Cucurbita maxima OX=3661 GN=LOC111491491 PE=4 SV=1	[more]
A0A5A7T5J8	7.8e-136	86.86	Protein TORNADO 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00...	[more]
A0A0A0LEA8	7.8e-136	87.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901690 PE=4 SV=1	[more]
A0A1S3CQH2	7.8e-136	86.86	protein TORNADO 2 OS=Cucumis melo OX=3656 GN=LOC103503551 PE=4 SV=1	[more]

BLAST of CmoCh02G016610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46700.1	6.8e-108	68.54	Tetraspanin family protein	[more]
AT2G19580.1	1.5e-75	51.12	tetraspanin2	[more]
AT3G45600.1	5.9e-59	43.75	tetraspanin3	[more]
AT5G60220.1	5.5e-57	42.97	tetraspanin4	[more]
AT2G23810.1	2.7e-56	41.54	tetraspanin8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 4..250 e-value: 2.5E-24 score: 86.3
None	No IPR available	PANTHER	PTHR32191:SF14	PROTEIN TORNADO 2	coord: 1..267
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G016610.1	CmoCh02G016610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma