CmoCh02G015830 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G015830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	polyadenylate-binding protein RBP47B'
Location	Cmo_Chr02: 9133323 .. 9136396 (+)
RNA-Seq Expression	CmoCh02G015830
Synteny	CmoCh02G015830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCTATGGCAGGCCAACCAGCGCACCATCAACCAACTACGGTGGAGGAAGTTAGAACACTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTCGCTCACACTGGCGAGGTTCGTTCGTTTGTTTCTTCTTTAATTTTGCGCGCTTTTGTGTTTATCATATTACTTTTAATCGATAGAATTTCAAGTGGTTTTCGACTTTTTGTTATCGTAGTGCAATATGTAATTATTATATGGGTCTGAATTGGTTAGTTTTCTTCTGGTCTTGGAAGTGAATTTGGGTGCATAAAATTAAAATTAGAATGTGTTTGTATTTTGTTCTATTGCTGTGAGAAACGAAGCACGCGGAGGGCCTTTCTATGACCTTTCATGCCACCGAATGGGGATGAATTGAATGCTTGAGAGCCGTGGTAGTAGAAATGCCAGTGTAAAATTATAGTTATTTTCTAGTAGTTGTTATATTATAATGGCTCATACAAGTTTATTCTTGAATCTTGATGTCTAGTGGTAGTTTTTTTGTTATTGTATTTGAGTCAGAGCTTAGTTGCTTATTTTTTATACAGGTTATGTCAATTAAAATCATTCGCAATAAGATCACTGGCCAGCCTGAGGGTTATGGGTTTGTAGAGTTTGTTTCTCATGCAGCAGCAGAAAGAATTTTGCAGACGTACAATGGTTCTCAGATGCCCGGAACTGAGCAAACTTTCAGGTTGAATTGGGCATCTTTTGGAATTGGAGAAAGGCGCCCTGACGCTGGCCCTGAGCACTCTATTTTTGTTGGGGATTTGGCTCCTGATGTTACAGATTATCTGTTGCAGGAGACCTTTAGAGTGCAGTATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATACTCTAGGTAAAGGTAAAGGCAATATAGTCATTTCTCACGCTTTCTAATATTCGTGACCCATATGGAGTGAGTATAAGCTTTTTAAGCATTCATCCAAGTTTCTAGTCTGGTTCATATCTGTGCCAGTGGTCATAGTTATGAAGATGTTTGGCTCTAAAATTTGAATTTCACCCCTGTTAATGAAAGTTATCATTTTTTTTTTTTTTTGCATCAGTAAACCTAAAGCTAGGAGTTCAATATGTACGAATGATTTTTCTGAAATTTTTATAGATATTATCCATATTAGTGTTCTTAGATTTAAGATGAAAACTTATAAAGTTAATAGTTATATATTTTGAATGTATATGTCAAAATATATTCTATTCCTTAATGATTTTTTTGGATAAACAAGTTATTCAGCTGAATTACGAATGAGATAGAATTCATTGTTGTTATTGTCTTTCCTTCGCTTAAAGAGAAAATCTTTGGAGGGGATGGTAATTTACTATTTCTAAGCTCAATACTTATGACCAACGACCTTACTTGAACACGATCTATTCTATAGGTTGTACAACTATGTCATTGGTGTCTAAAATCGTACTTACCTATGTGCCTCTTGTCTCAGCAATGTACCCAGTTCCTTCCTACACTACACCCGTGCCTGTGCTTCCTGCAGATTATGATGCAAATAACACAACTGTAAGTGAAGGGGCAGTGTTACTCTTTCTTGTTTCTATGCTTGTCTCTCACTACATTGTTCTTTATGCAGATCTTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTCTGCAGTTTGGTGAGATTGTTTATGCAAAAATTCCTGCTGGGAAAGGTTGTGGTTTTGTACAGTTTGGTACGAGGTATGCTTAGGCATGATTAATTTTATTGATTTAAGTTGAGTAAATTGCATCTCTCCTTGCTCCTGATCCAATGCCTTGAAAGAAGGCTCTGAATAATAATGGTCTGAAGTGGGAGACAAAATTCTTGTGGAATAGAAGGAAAATTCTTGTGTATGTAGGATATATTATCTATTTCTGTTTTTCACCATGAACATTTGGATTTGGATTAAATATGTTCTCCAAATTGTGTCCATGCAGACCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGGTAATCGGTCAGCAAGTGGTTCGTACTTCTTGGGGTAGAAATCCGGCTATCAAGCAGGTAATTGATATTCTATAGAGACATCTACAAAGCTATACCAGACACAATCATTGACTAATTCTATTTTTCGAAGGACTTCGAATTTTCCATGTTTTCTGTAATCCCCTTGTTCATGGATGTTTTCTGTTAGCAAGTTCTCACAATATCCTGTATAAGGCTCATAGTGAACCAGAGTTCTCTGTATTGAGTAGACTTTGAGTTTGATGAAATGGGGATGGACTTTTAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCAAACCAGTGGAGCGCTTACTATGGTGGCTATGGTGGAGCTTATGATGCTTATGGATATGGAGTCGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATACCTCGTATCCTCAACAGGTACGTTTCATCAGAATAAAATGAGCGGGAATCAAGAGCATATATTTATAGAAAAAAGGTTGTTCTATTCAGAAAATTGATTGCCTTTTCTGATCTTGGAACTATTTATTTGAACTCTTTTCTTTTAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCTGTTCCCGCTGTGGAACAGGCAGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAGTTGTAAGTTTCTCTCTTCTGCCCCTCTGGAGATAAAAGATTGCAAATTAACAAGTCTCATTATATGAACTTGCATTGACATCAGATCGTTAATTGGCAGTTTAAATTATGCATACCTTTCCAAACATGAAAGCGCCATTTTAGGGTGGCCCTTATGGTTGACCACCTCTTCACTGGTTAAGCAAACGTGA

mRNA sequence

ATGGCAGCTATGGCAGGCCAACCAGCGCACCATCAACCAACTACGGTGGAGGAAGTTAGAACACTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTCGCTCACACTGGCGAGGTTATGTCAATTAAAATCATTCGCAATAAGATCACTGGCCAGCCTGAGGGTTATGGGTTTGTAGAGTTTGTTTCTCATGCAGCAGCAGAAAGAATTTTGCAGACGTACAATGGTTCTCAGATGCCCGGAACTGAGCAAACTTTCAGGTTGAATTGGGCATCTTTTGGAATTGGAGAAAGGCGCCCTGACGCTGGCCCTGAGCACTCTATTTTTGTTGGGGATTTGGCTCCTGATGTTACAGATTATCTGTTGCAGGAGACCTTTAGAGTGCAGTATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATACTCTAGGTAAAGCAATGTACCCAGTTCCTTCCTACACTACACCCGTGCCTGTGCTTCCTGCAGATTATGATGCAAATAACACAACTATCTTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTCTGCAGTTTGGTGAGATTGTTTATGCAAAAATTCCTGCTGGGAAAGGTTGTGGTTTTGTACAGTTTGGTACGAGACCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGGTAATCGGTCAGCAAGTGGTTCGTACTTCTTGGGGTAGAAATCCGGCTATCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCAAACCAGTGGAGCGCTTACTATGGTGGCTATGGTGGAGCTTATGATGCTTATGGATATGGAGTCGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATACCTCGTATCCTCAACAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCTGTTCCCGCTGTGGAACAGGCAGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAGTTTTTAAATTATGCATACCTTTCCAAACATGAAAGCGCCATTTTAGGGTGGCCCTTATGGTTGACCACCTCTTCACTGGTTAAGCAAACGTGA

Coding sequence (CDS)

ATGGCAGCTATGGCAGGCCAACCAGCGCACCATCAACCAACTACGGTGGAGGAAGTTAGAACACTTTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTCGCTCACACTGGCGAGGTTATGTCAATTAAAATCATTCGCAATAAGATCACTGGCCAGCCTGAGGGTTATGGGTTTGTAGAGTTTGTTTCTCATGCAGCAGCAGAAAGAATTTTGCAGACGTACAATGGTTCTCAGATGCCCGGAACTGAGCAAACTTTCAGGTTGAATTGGGCATCTTTTGGAATTGGAGAAAGGCGCCCTGACGCTGGCCCTGAGCACTCTATTTTTGTTGGGGATTTGGCTCCTGATGTTACAGATTATCTGTTGCAGGAGACCTTTAGAGTGCAGTATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTGTTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATACTCTAGGTAAAGCAATGTACCCAGTTCCTTCCTACACTACACCCGTGCCTGTGCTTCCTGCAGATTATGATGCAAATAACACAACTATCTTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTCTGCAGTTTGGTGAGATTGTTTATGCAAAAATTCCTGCTGGGAAAGGTTGTGGTTTTGTACAGTTTGGTACGAGACCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGGTAATCGGTCAGCAAGTGGTTCGTACTTCTTGGGGTAGAAATCCGGCTATCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCAAACCAGTGGAGCGCTTACTATGGTGGCTATGGTGGAGCTTATGATGCTTATGGATATGGAGTCGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATACCTCGTATCCTCAACAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCTGTTCCCGCTGTGGAACAGGCAGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAGTTTTTAAATTATGCATACCTTTCCAAACATGAAAGCGCCATTTTAGGGTGGCCCTTATGGTTGACCACCTCTTCACTGGTTAAGCAAACGTGA

Protein sequence

MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQVDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLVKQT

Homology

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BLAST of CmoCh02G015830 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.5e-162
Identity = 293/422 (69.43%), Postives = 335/422 (79.38%), Query Frame = 0


Query: 7   QPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNG+QMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFRV Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYTLGKAMYPV---PSYTTPVP--VLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY + KA+YPV    +   PV   V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGR 306
           TEEELK+ F Q GE++Y KIPA KG G+VQF TRPSAEEA+Q+MQG+VIGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQV 366
           NP   QD   W  Q DPNQW+ YY GYG  YDAY YG  QDPS+YAYG Y GY  YPQQ 
Sbjct: 311 NPG--QD--GWVTQADPNQWNGYY-GYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQG 370

Query: 367 DGVQDLA-AVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 423
           +G QD++ + AG V   EQ  E  D L TPDV+ LN AYLS H SAILG P+W  TSSL 
Sbjct: 371 EGTQDISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLT 422

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BLAST of CmoCh02G015830 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.1e-113
Identity = 218/360 (60.56%), Postives = 255/360 (70.83%), Query Frame = 0


Query: 3   AMAGQPAHHQPT-TVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPE 62
           AMA    +  PT    EVR+LWIGDLQYW+DE+YL++CF HTGE++S K+IRNK TGQ E
Sbjct: 66  AMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSE 125

Query: 63  GYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLA 122
           GYGF+EF SHAAAE ILQTYNG+ MP  EQ FR+NWAS G GERR D+  EH+IFVGDLA
Sbjct: 126 GYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGDLA 185

Query: 123 PDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCS 182
            DVTDY+LQETF+  Y SVRGAKVVTD  TGRSKGYGFVKFADE+E+ RAM+EMNGV CS
Sbjct: 186 ADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCS 245

Query: 183 TRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPNI 242
           TRPMRI  A  KK +G  Q     KA Y  P  T        + D NNTTIFVG LDP +
Sbjct: 246 TRPMRIGPAANKKPVGTPQ-----KATYQNPQAT------QGESDPNNTTIFVGGLDPTV 305

Query: 243 TEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGR 302
            EE L+Q F  +GE+V+ KI AGK CGFVQFGTR SAE+A+  + G  +G Q +R SWGR
Sbjct: 306 AEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGR 365

Query: 303 NPAIKQ-DLATWGQQVDPNQWSAYYGGYGGAYDAYGYG-VVQDPSLYAYGAYSGYTSYPQ 360
           +P+ KQ D   WG         AYY GYG  Y+AYGY    QDP++Y YG Y GY +Y Q
Sbjct: 366 SPSSKQTDQTQWG-----GSGGAYY-GYGQGYEAYGYAPPAQDPNMY-YGNYPGYANYQQ 406

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BLAST of CmoCh02G015830 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.8e-112
Identity = 212/355 (59.72%), Postives = 254/355 (71.55%), Query Frame = 0


Query: 13  PTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFVEFVSHA 72
           P   +EV+TLWIGDLQ W+DESY+ +CFA TGEV S+K+IR+K +GQ +GYGFVEF S A
Sbjct: 83  PAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRA 142

Query: 73  AAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQET 132
           AA+RILQTYNG  MP  E  FRLNWAS   GE+R D  P+++IFVGDLA DVTDYLLQET
Sbjct: 143 AADRILQTYNGQMMPNVEMVFRLNWAS--AGEKRDDT-PDYTIFVGDLAADVTDYLLQET 202

Query: 133 FRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATP 192
           FRV YPSV+GAKVVTD  T RSKGYGFVKF D  E+ RAM+EMNG+ CS+RPMRI  A  
Sbjct: 203 FRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAAN 262

Query: 193 KKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQ 252
           KKT GVQ++         VP+         ++ D NNTTIFVG LDPN+TE+ LKQ F  
Sbjct: 263 KKTTGVQER---------VPN----AQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAP 322

Query: 253 FGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNPAIKQDLATW 312
           +GE+V+ KIP GK CGFVQ+  RPSAE+A+  +QG +IG Q VR SWGR+ + KQ     
Sbjct: 323 YGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQ----- 382

Query: 313 GQQVDPNQWSA------YYGGYGGAYDAY-GYGVVQDPSLYAYGAYSGYTSYPQQ 361
             Q D NQW A      YYGGYG  Y+AY GY   QDP++Y YGAY+GY +Y QQ
Sbjct: 383 -PQHDSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQ 415

[Close]

BLAST of CmoCh02G015830 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 7.9e-108
Identity = 206/361 (57.06%), Postives = 256/361 (70.91%), Query Frame = 0


Query: 7   QPAHHQPTTV----EEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEG 66
           Q     PT +    E+ +T+WIGDLQ W+DESYL+SCF+  GEV+S+KIIRNK TGQ E 
Sbjct: 67  QKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSER 126

Query: 67  YGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAP 126
           YGFVEF +HAAAE++LQ+YNG+ MP TEQ FRLNWA F  GE+R + G + SIFVGDLA 
Sbjct: 127 YGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLAS 186

Query: 127 DVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCST 186
           DVTD +L++TF  +YPS++GAKVV D NTG SKGYGFV+F DE+ER+RAM+EMNGVYCS+
Sbjct: 187 DVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSS 246

Query: 187 RPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVL---PADYDANNTTIFVGNLDP 246
           R MRI  ATPKK     +QY+  +A+     Y +         +D D++NTTIFVG LD 
Sbjct: 247 RAMRIGVATPKKP-SAHEQYS-SQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDS 306

Query: 247 NITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSW 306
            +T+EEL+Q+F QFGE+V  KIPAGKGCGFVQF  R SA+EAIQK+ G +IG+Q VR SW
Sbjct: 307 EVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSW 366

Query: 307 GRNPAIKQDLATWGQQVDPNQWSAYYGGYGGA--YDAYGYGVV--QDPSLYAYGAYSGYT 357
           GR+PA KQ     G     +QW+   GGY G   Y  YGYG    QD  +YA GA  G +
Sbjct: 367 GRSPANKQMRTDSG-----SQWN---GGYNGRQNYGGYGYGASQNQDSGMYATGAAYGAS 417

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BLAST of CmoCh02G015830 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-107
Identity = 198/350 (56.57%), Postives = 249/350 (71.14%), Query Frame = 0


Query: 5   AGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGSQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N + +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFR  YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            SY +    +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNP 304
           + LK  F Q+GEIV+ KIPAGK CGFVQF  +  AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSG 354
           + K       Q  DP+Q+  YYGGYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 SNK-------QSGDPSQF--YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of CmoCh02G015830 vs. ExPASy TrEMBL
Match: A0A6J1H3K6 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459701 PE=4 SV=1)

HSP 1 Score: 874.4 bits (2258), Expect = 1.9e-250
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
           VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           KQT
Sbjct: 421 KQT 423

[Close]

BLAST of CmoCh02G015830 vs. ExPASy TrEMBL
Match: A0A6J1H274 (polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459701 PE=4 SV=1)

HSP 1 Score: 864.8 bits (2233), Expect = 1.5e-247
Identity = 421/423 (99.53%), Postives = 421/423 (99.53%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTL  AMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTL--AMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
           VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           KQT
Sbjct: 421 KQT 421

[Close]

BLAST of CmoCh02G015830 vs. ExPASy TrEMBL
Match: A0A6J1K6N6 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491635 PE=4 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 8.4e-246
Identity = 416/423 (98.35%), Postives = 421/423 (99.53%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRVQYPSVRGAKVVTD NTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDSNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+LGKAMYPVP+YT+PVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPTYTSPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFG+RPSAEEAIQKMQGKVIGQQVVRTS G
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGSRPSAEEAIQKMQGKVIGQQVVRTSLG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
           VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           K+T
Sbjct: 421 KKT 423

[Close]

BLAST of CmoCh02G015830 vs. ExPASy TrEMBL
Match: A0A6J1K1T3 (polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491635 PE=4 SV=1)

HSP 1 Score: 849.4 bits (2193), Expect = 6.7e-243
Identity = 414/423 (97.87%), Postives = 419/423 (99.05%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRVQYPSVRGAKVVTD NTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDSNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+L  AMYPVP+YT+PVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSL--AMYPVPTYTSPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFG+RPSAEEAIQKMQGKVIGQQVVRTS G
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGSRPSAEEAIQKMQGKVIGQQVVRTSLG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
           VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           K+T
Sbjct: 421 KKT 421

[Close]

BLAST of CmoCh02G015830 vs. ExPASy TrEMBL
Match: A0A1S3ATQ6 (polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 829.7 bits (2142), Expect = 5.5e-237
Identity = 399/423 (94.33%), Postives = 409/423 (96.69%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MA +AGQP HHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNG+QMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFR QYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+LGKAMYPVP+YTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI Y KIPAGKGCGFVQFGTR SAEEAIQKMQGK+IGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPA KQDLATWGQQVDPNQWSAYY GYGG YDAYGYGVVQDPSLYAYGAYSGY SYPQQ
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYY-GYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
           VDGVQDLA VAGAVP+VEQ EEWNDTLDTPDV++LN AYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           +QT
Sbjct: 421 RQT 422

[Close]

BLAST of CmoCh02G015830 vs. NCBI nr
Match: XP_022958490.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 874.4 bits (2258), Expect = 4.0e-250
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
           VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           KQT
Sbjct: 421 KQT 423

[Close]

BLAST of CmoCh02G015830 vs. NCBI nr
Match: XP_023533305.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 868.2 bits (2242), Expect = 2.9e-248
Identity = 419/423 (99.05%), Postives = 422/423 (99.76%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+LGKAMYPVP+YTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQ 
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQP 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
           VDGVQDLAAVAGAVPAVEQ+EEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           KQT
Sbjct: 421 KQT 423

[Close]

BLAST of CmoCh02G015830 vs. NCBI nr
Match: KAG6606177.1 (Polyadenylate-binding protein RBP47B', partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 867.5 bits (2240), Expect = 4.9e-248
Identity = 419/423 (99.05%), Postives = 420/423 (99.29%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+LGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGV QDPSLYAYGAYSGYTSYPQ 
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVAQDPSLYAYGAYSGYTSYPQP 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
            DGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 ADGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           KQT
Sbjct: 421 KQT 423

[Close]

BLAST of CmoCh02G015830 vs. NCBI nr
Match: XP_022958491.1 (polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 864.8 bits (2233), Expect = 3.2e-247
Identity = 421/423 (99.53%), Postives = 421/423 (99.53%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTL  AMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTL--AMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
           VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           KQT
Sbjct: 421 KQT 421

[Close]

BLAST of CmoCh02G015830 vs. NCBI nr
Match: XP_022996400.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022996401.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 859.0 bits (2218), Expect = 1.7e-245
Identity = 416/423 (98.35%), Postives = 421/423 (99.53%), Query Frame = 0


Query: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
           MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1   MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRVQYPSVRGAKVVTD NTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDSNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+LGKAMYPVP+YT+PVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPTYTSPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
           ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFG+RPSAEEAIQKMQGKVIGQQVVRTS G
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGSRPSAEEAIQKMQGKVIGQQVVRTSLG 300

Query: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
           RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360

Query: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420
           VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 420

Query: 421 KQT 424
           K+T
Sbjct: 421 KKT 423

[Close]

BLAST of CmoCh02G015830 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 573.9 bits (1478), Expect = 1.0e-163
Identity = 293/422 (69.43%), Postives = 335/422 (79.38%), Query Frame = 0


Query: 7   QPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNG+QMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFRV Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYTLGKAMYPV---PSYTTPVP--VLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY + KA+YPV    +   PV   V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGR 306
           TEEELK+ F Q GE++Y KIPA KG G+VQF TRPSAEEA+Q+MQG+VIGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQV 366
           NP   QD   W  Q DPNQW+ YY GYG  YDAY YG  QDPS+YAYG Y GY  YPQQ 
Sbjct: 311 NPG--QD--GWVTQADPNQWNGYY-GYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQG 370

Query: 367 DGVQDLA-AVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLV 423
           +G QD++ + AG V   EQ  E  D L TPDV+ LN AYLS H SAILG P+W  TSSL 
Sbjct: 371 EGTQDISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLT 422

[Close]

BLAST of CmoCh02G015830 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 568.5 bits (1464), Expect = 4.4e-162
Identity = 286/417 (68.59%), Postives = 327/417 (78.42%), Query Frame = 0


Query: 7   QPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNG+QMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFRV Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPNITEEEL 246
           ISAATPKK +GVQQQY     +    +      V P + D   TTI V NLD N+TEEEL
Sbjct: 191 ISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEEL 250

Query: 247 KQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNPAIK 306
           K+ F Q GE++Y KIPA KG G+VQF TRPSAEEA+Q+MQG+VIGQQ VR SW +NP   
Sbjct: 251 KKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPG-- 310

Query: 307 QDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQVDGVQD 366
           QD   W  Q DPNQW+ YY GYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +G QD
Sbjct: 311 QD--GWVTQADPNQWNGYY-GYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGEGTQD 370

Query: 367 LA-AVAGAVPAVEQAEEWNDTLDTPDVEFLNYAYLSKHESAILGWPLWLTTSSLVKQ 423
           ++ + AG V   EQ  E  D L TPDV+ LN AYLS H SAILG P+W  TSSL  Q
Sbjct: 371 ISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQ 418

[Close]

BLAST of CmoCh02G015830 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 391.3 bits (1004), Expect = 9.5e-109
Identity = 198/350 (56.57%), Postives = 249/350 (71.14%), Query Frame = 0


Query: 5   AGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGSQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N + +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFR  YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            SY +    +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNP 304
           + LK  F Q+GEIV+ KIPAGK CGFVQF  +  AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSG 354
           + K       Q  DP+Q+  YYGGYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 SNK-------QSGDPSQF--YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of CmoCh02G015830 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 378.6 bits (971), Expect = 6.4e-105
Identity = 205/357 (57.42%), Postives = 249/357 (69.75%), Query Frame = 0


Query: 11  HQPTTVEEVRTLWIGDLQYWVDESYLNSCF--AHTGEVMSIKIIRNKITGQPEGYGFVEF 70
           HQ     E +T+W+GDLQ W+DE+YLNS F  A   E++S+K+IRNK  G  EGYGFVEF
Sbjct: 94  HQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEF 153

Query: 71  VSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDY 130
            SH  A+++LQ +NG+ MP T+Q FRLNWASF  GE+R  + GP+ SIFVGDLAPDV+D 
Sbjct: 154 ESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDA 213

Query: 131 LLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRI 190
           LL ETF  +YPSV+ AKVV D NTGRSKGYGFV+F DENER +AM+EMNGV CS+R MRI
Sbjct: 214 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 273

Query: 191 SAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPNITEEELK 250
             ATP+KT G QQQ        P  ++T       ++ D  NTTIFVG LD ++T+E+LK
Sbjct: 274 GPATPRKTNGYQQQ----GGYMPSGAFTR------SEGDTINTTIFVGGLDSSVTDEDLK 333

Query: 251 QTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNPAIKQ 310
           Q F +FGEIV  KIP GKGCGFVQF  RP+AEEA++K+ G VIG+Q VR SWGRNPA KQ
Sbjct: 334 QPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQ 393

Query: 311 DLATWGQQ-VDPNQWSAYYGGYGGAYDAYGYGVVQ-DPSLY-AYGAYSGYTSYPQQV 362
               +G Q VDP     YYGG    Y+ YGY V Q DP +Y A   Y  Y  + QQV
Sbjct: 394 PRDKYGNQWVDP-----YYGGQ--FYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQQV 433

[Close]

BLAST of CmoCh02G015830 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 376.3 bits (965), Expect = 3.2e-104
Identity = 193/352 (54.83%), Postives = 237/352 (67.33%), Query Frame = 0


Query: 13  PTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFVEFVSHA 72
           P +  +V++LWIGDLQ W+DE+Y+ S FA +GE  S K+IRNK+TGQ EGYGF+EFVSH+
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHS 112

Query: 73  AAERILQTYNGSQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDYLLQE 132
            AER+LQTYNG+ MP TEQTFRLNWA  G GE+R    GP+H+IFVGDLAP+VTDY+L +
Sbjct: 113 VAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSD 172

Query: 133 TFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAAT 192
           TF+  Y SV+GAKVV D  TGRSKGYGFV+FADENE+ RAM+EMNG YCSTRPMRI  A 
Sbjct: 173 TFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 232

Query: 193 PKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFL 252
            K  + +Q       AMY              D D NNTTIFVG LD N+T++ELK  F 
Sbjct: 233 NKNALPMQ------PAMYQNTQGAN-----AGDNDPNNTTIFVGGLDANVTDDELKSIFG 292

Query: 253 QFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNPAIKQDLAT 312
           QFGE+++ KIP GK CGFVQ+  + SAE A+  + G  +G Q +R SWGR+P  + D A 
Sbjct: 293 QFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQ 352

Query: 313 WGQQVDPNQWSAYYGGYGGAYDAYGYGV---VQDPSLYAYGAYSGYTSYPQQ 361
           W           YYG        YGY      QDP+ Y YG Y+GY +Y QQ
Sbjct: 353 W-------NGGGYYGYPPQPQGGYGYAAQPPTQDPNAY-YGGYTGYGNYQQQ 385

The following BLAST results are available for this feature:

BLAST of CmoCh02G015830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXZ9	1.5e-162	69.43	Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'...	[more]
Q9LEB4	2.1e-113	60.56	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0J9Y2	1.8e-112	59.72	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9LEB3	7.9e-108	57.06	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9SAB3	1.3e-107	56.57	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]

BLAST of CmoCh02G015830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3K6	1.9e-250	100.00	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1H274	1.5e-247	99.53	polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita moschata OX=3...	[more]
A0A6J1K6N6	8.4e-246	98.35	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1K1T3	6.7e-243	97.87	polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A1S3ATQ6	5.5e-237	94.33	polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of CmoCh02G015830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958490.1	4.0e-250	100.00	polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata]	[more]
XP_023533305.1	2.9e-248	99.05	polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita pepo subsp. pep...	[more]
KAG6606177.1	4.9e-248	99.05	Polyadenylate-binding protein RBP47B', partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022958491.1	3.2e-247	99.53	polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita moschata]	[more]
XP_022996400.1	1.7e-245	98.35	polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022...	[more]

BLAST of CmoCh02G015830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19350.1	1.0e-163	69.43	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	4.4e-162	68.59	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G11650.2	9.5e-109	56.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G47500.1	6.4e-105	57.42	RNA-binding protein 47C'	[more]
AT5G54900.1	3.2e-104	54.83	RNA-binding protein 45A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 231..298 e-value: 2.7E-22 score: 90.1 coord: 21..96 e-value: 8.2E-14 score: 61.9 coord: 114..188 e-value: 2.2E-20 score: 83.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 22..90 e-value: 5.7E-14 score: 51.7 coord: 115..180 e-value: 7.3E-16 score: 57.8 coord: 232..295 e-value: 1.4E-18 score: 66.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..100 score: 15.391531
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 113..192 score: 17.165293
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 230..302 score: 17.06296
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 19..99 e-value: 5.0E-24 score: 86.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 222..307 e-value: 3.6E-24 score: 86.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 103..209 e-value: 2.2E-22 score: 81.5
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 10..360
None	No IPR available	PANTHER	PTHR47640:SF6	POLYADENYLATE-BINDING PROTEIN RBP45A-RELATED	coord: 10..360
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 21..101 e-value: 1.25964E-47 score: 155.884
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 229..300 e-value: 4.1206E-38 score: 130.501
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 112..191 e-value: 8.87772E-54 score: 171.693
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 112..304
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 8..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G015830.1	CmoCh02G015830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding