CmoCh02G015230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G015230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor ERF026-like
Location	Cmo_Chr02: 8862933 .. 8863445 (+)
RNA-Seq Expression	CmoCh02G015230
Synteny	CmoCh02G015230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTTGACTTCCTCTTCTTCGTCATCTTCATCGACCACGAAGCATCCTCTGTACAGAGGAATTCGGTGCAGGGGTGGAAAATGGGTGTCGGAGATCCGGGAGCCACGTAAGACGACACGCATATGGCTAGGTACATTTCCGACACCCGAGATGGCTGCCACAGCTTACGACGTTGCCGCTCTCGCTCTCCGAGGTGATCAAGCCATCCTTAACTTCCCCTCCTCTGTTGCCTCCTATCCTGTTCCTGCCTCCACCTCCCCGCTTGACATACGCAATGCTGCCTCCGCCGCCGCCAATGCGTTGAACAAAGTTGAGACTTGCAGCACTAACATTGAAGATAGTGGTAATACGGCGTCGTTCGTGGATGAGGAGGAGATTTTTGGGATGCCAAGTTTGCTGGCCGACATGGCGGAGGGGATGATGGTGTCGCCGCCAAGAATGAACTCTCCACCGCTGTCTGATGACAACTCCGATGGAACGGAATGTTTATGGAACTATTTTTTATGA

mRNA sequence

ATGGCTTCTTTGACTTCCTCTTCTTCGTCATCTTCATCGACCACGAAGCATCCTCTGTACAGAGGAATTCGGTGCAGGGGTGGAAAATGGGTGTCGGAGATCCGGGAGCCACGTAAGACGACACGCATATGGCTAGGTACATTTCCGACACCCGAGATGGCTGCCACAGCTTACGACGTTGCCGCTCTCGCTCTCCGAGGTGATCAAGCCATCCTTAACTTCCCCTCCTCTGTTGCCTCCTATCCTGTTCCTGCCTCCACCTCCCCGCTTGACATACGCAATGCTGCCTCCGCCGCCGCCAATGCGTTGAACAAAGTTGAGACTTGCAGCACTAACATTGAAGATAGTGGTAATACGGCGTCGTTCGTGGATGAGGAGGAGATTTTTGGGATGCCAAGTTTGCTGGCCGACATGGCGGAGGGGATGATGGTGTCGCCGCCAAGAATGAACTCTCCACCGCTGTCTGATGACAACTCCGATGGAACGGAATGTTTATGGAACTATTTTTTATGA

Coding sequence (CDS)

ATGGCTTCTTTGACTTCCTCTTCTTCGTCATCTTCATCGACCACGAAGCATCCTCTGTACAGAGGAATTCGGTGCAGGGGTGGAAAATGGGTGTCGGAGATCCGGGAGCCACGTAAGACGACACGCATATGGCTAGGTACATTTCCGACACCCGAGATGGCTGCCACAGCTTACGACGTTGCCGCTCTCGCTCTCCGAGGTGATCAAGCCATCCTTAACTTCCCCTCCTCTGTTGCCTCCTATCCTGTTCCTGCCTCCACCTCCCCGCTTGACATACGCAATGCTGCCTCCGCCGCCGCCAATGCGTTGAACAAAGTTGAGACTTGCAGCACTAACATTGAAGATAGTGGTAATACGGCGTCGTTCGTGGATGAGGAGGAGATTTTTGGGATGCCAAGTTTGCTGGCCGACATGGCGGAGGGGATGATGGTGTCGCCGCCAAGAATGAACTCTCCACCGCTGTCTGATGACAACTCCGATGGAACGGAATGTTTATGGAACTATTTTTTATGA

Protein sequence

MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL

Homology

[Close]

BLAST of CmoCh02G015230 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.0e-45
Identity = 101/177 (57.06%), Postives = 122/177 (68.93%), Query Frame = 0


Query: 3   SLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAA 62
           +L ++ +  S   K+P+YRGIRCR GKWVSEIREP+KTTR+WLGT+PTPEMAA AYDVAA
Sbjct: 73  TLMATDTDISRRKKNPVYRGIRCRSGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAA 132

Query: 63  LALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAA---NALNKVETCSTNIED---- 122
           LAL+G   +LNFP S+ SYP+P S+S   IR AA+AAA    A           ED    
Sbjct: 133 LALKGGDTLLNFPDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKKEDKVYD 192

Query: 123 --SGNTASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSD--DNSDGTECLWNY 169
               +T  FVDEEE+  MP LLADMA+GMMV+PP M SPP  D  +NSDG E LW+Y
Sbjct: 193 TAESSTMGFVDEEELLNMPGLLADMAKGMMVAPPWMGSPPSDDSPENSDG-ESLWSY 248

[Close]

BLAST of CmoCh02G015230 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.4e-41
Identity = 97/188 (51.60%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 7   SSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALR 66
           +S+   S  K P+YRGIRCR GKWVSEIREPRKTTRIWLGT+P  EMAA AYDVAA+AL+
Sbjct: 6   ASAGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALK 65

Query: 67  GDQAILNFPSSVASYPVPASTSPLDIRNAASAAA--------------------NALNKV 126
           G +A+LNFP SV SYPVP STS  DIR AA+AAA                    ++ ++ 
Sbjct: 66  GREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRA 125

Query: 127 ETCSTNIEDSGNTA----SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGT 169
             C  +  D G+++     F+DEEE+  MP+LLA+MAEGMMV+PP       SDD+ + +
Sbjct: 126 RECHVD-NDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENS 185

[Close]

BLAST of CmoCh02G015230 vs. ExPASy Swiss-Prot
Match: Q9FJ90 (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-37
Identity = 88/171 (51.46%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 16  KHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALRGDQAILNFP 75
           KH ++RGIR R GKWVSEIREPRKTTRIWLGT+P PEMAA AYDVAALAL+G  A+LNFP
Sbjct: 61  KHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFP 120

Query: 76  SSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNI-------------EDSGNTAS- 135
               +Y  P S S  DIR AAS AA      +     +             E S N+ S 
Sbjct: 121 GLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVSCNSCSL 180

Query: 136 -FVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGT---ECLWNY 169
            F+DEE +  MP+LL +MAEGM++SPPRM   P  +D+S      + LW+Y
Sbjct: 181 EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of CmoCh02G015230 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.9e-36
Identity = 90/180 (50.00%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 9   SSSSSTTKHPLYRGIRCR--GGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALR 68
           +S  +  +HPLYRG+R R    KWVSEIREPRK  RIWLGTF TPEMAA AYDVAALAL+
Sbjct: 4   TSKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALK 63

Query: 69  GDQAILNFPSSVASYPVPASTSPLDIRNAASAAANAL-----------NKVET----CST 128
           G QA LNFP+SV+S P P S SP DI+ AA++AA A            N  +T    C  
Sbjct: 64  GSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMN 123

Query: 129 NIEDSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPR---MNSPPLSDDNSDGTECLWNY 169
           +  D+ N   F+DE+ +F MP++L +MAEGM++SPPR    ++   +D    G + LWN+
Sbjct: 124 SSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

[Close]

BLAST of CmoCh02G015230 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 3.3e-33
Identity = 84/172 (48.84%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 15  TKHPLYRGIRCR-GGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALRGDQAILN 74
           T+HP+YRG+R R  GKWVSE+REP K TRIWLGTF T EMAA A+DVAALALRG  A LN
Sbjct: 43  TRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLN 102

Query: 75  FPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSG---------------- 134
           F  S     +P ST   DI+ AA+ AA A    ETC T   + G                
Sbjct: 103 FADSAWRLRIPESTCAKDIQKAAAEAALAFQD-ETCDTTTTNHGLDMEETMVEAIYTPEQ 162

Query: 135 -NTASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNY 169
              A ++DEE +FGMP+LL +MAEGM++ PP +      D   DG   LW+Y
Sbjct: 163 SEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

[Close]

BLAST of CmoCh02G015230 vs. ExPASy TrEMBL
Match: A0A6J1H2C4 (ethylene-responsive transcription factor ERF026-like OS=Cucurbita moschata OX=3662 GN=LOC111459744 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60
           MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV
Sbjct: 1   MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60

Query: 61  AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSGNTA 120
           AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSGNTA
Sbjct: 61  AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSGNTA 120

Query: 121 SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL 171
           SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL
Sbjct: 121 SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL 170

[Close]

BLAST of CmoCh02G015230 vs. ExPASy TrEMBL
Match: A0A6J1K5S4 (ethylene-responsive transcription factor ERF026-like OS=Cucurbita maxima OX=3661 GN=LOC111491416 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.0e-82
Identity = 164/181 (90.61%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 1   MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60
           MASLTSSSSSSSST KHPLYRGIRCR GKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV
Sbjct: 1   MASLTSSSSSSSSTKKHPLYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60

Query: 61  AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAAS---AAANALNKVETCSTNIE--- 120
           AALALRGDQAI+NFPSS+ASYP+PASTSPLDIRNAAS   AAANALNKVETCSTNIE   
Sbjct: 61  AALALRGDQAIINFPSSIASYPLPASTSPLDIRNAASAAAAAANALNKVETCSTNIEDTT 120

Query: 121 -----DSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYF 171
                DSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPR+NSPPLSDDNSDGTECLWNYF
Sbjct: 121 ITNIRDSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPRINSPPLSDDNSDGTECLWNYF 180

[Close]

BLAST of CmoCh02G015230 vs. ExPASy TrEMBL
Match: A0A6J1E354 (ethylene-responsive transcription factor ERF027-like OS=Cucurbita moschata OX=3662 GN=LOC111430369 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.8e-61
Identity = 132/188 (70.21%), Postives = 146/188 (77.66%), Query Frame = 0


Query: 2   ASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVA 61
           +S+ SS +SSSST KH LYRGIRCR GKWVSEIREPRKT RIWLGTFPTPEMAA AYDVA
Sbjct: 59  SSMASSITSSSSTKKHSLYRGIRCRSGKWVSEIREPRKTKRIWLGTFPTPEMAAAAYDVA 118

Query: 62  ALALRGDQAILNFPSSVASYPVPASTSPLDIRNAAS-----AAANALNKVETCSTNIEDS 121
           ALALRGD A+LNFP+S+ SYP+PASTSP+DIR AAS     +AAN L KVE   +NI+D+
Sbjct: 119 ALALRGDDAVLNFPASIPSYPIPASTSPIDIRAAASTAAAASAANTLKKVEGACSNIDDT 178

Query: 122 G-------------NTASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDD---NSD 169
                          T  FVDEEEIFGMPSLLADMAEGMMVSPPR+NSPP SDD   NSD
Sbjct: 179 KIITVEDCSNTTLLKTEEFVDEEEIFGMPSLLADMAEGMMVSPPRINSPPPSDDSIENSD 238

[Close]

BLAST of CmoCh02G015230 vs. ExPASy TrEMBL
Match: A0A6J1DZ30 (ethylene-responsive transcription factor ERF026-like OS=Momordica charantia OX=3673 GN=LOC111025942 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.7e-59
Identity = 132/189 (69.84%), Postives = 143/189 (75.66%), Query Frame = 0


Query: 3   SLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAA 62
           S +SS +SS ST KH LYRGIRCR GKWVSEIREPRKTTRIWLGTFPTPEMAA AYDVAA
Sbjct: 46  SSSSSMASSISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAA 105

Query: 63  LALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAA-----NALNK------------ 122
           LALRG  A+LNFP+S+ SYP+P STSP+DIR AASAAA     NAL K            
Sbjct: 106 LALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGS 165

Query: 123 VETCSTNIEDSGNTAS--FVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDD---NSD 170
           VE  +T +     T S  FVDEEE+FGMPSLLADMAEGMMVSPPRMNSPP SDD   NSD
Sbjct: 166 VEDTTTTVATDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPPRMNSPPPSDDSMENSD 225

[Close]

BLAST of CmoCh02G015230 vs. ExPASy TrEMBL
Match: A0A6J1HYE3 (ethylene-responsive transcription factor ERF027-like OS=Cucurbita maxima OX=3661 GN=LOC111469150 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.1e-58
Identity = 132/190 (69.47%), Postives = 144/190 (75.79%), Query Frame = 0


Query: 2   ASLTSS--SSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYD 61
           +S+ SS  SSSSSST KH LYRGIRCR GKWVSEIREPRKT RIWLGTFPT EMAA AYD
Sbjct: 55  SSMASSITSSSSSSTKKHSLYRGIRCRSGKWVSEIREPRKTKRIWLGTFPTAEMAAAAYD 114

Query: 62  VAALALRGDQAILNFPSSVASYPVPASTSPLDIRNAAS-----AAANALNKVETCSTNIE 121
           VAALALRG  A+LNFP+S+ SYP+PASTSP+DIR AAS     +AANAL K E   +NIE
Sbjct: 115 VAALALRGGDAVLNFPASIPSYPIPASTSPIDIRAAASTAAAASAANALKKAEGACSNIE 174

Query: 122 DSG-------------NTASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDD---N 169
           D+               T  FVDEEEIF MPSLLADMAEGMMVSPPR+NSPP SDD   N
Sbjct: 175 DTKIITVEDCSNTTLLKTEEFVDEEEIFSMPSLLADMAEGMMVSPPRINSPPPSDDSMEN 234

[Close]

BLAST of CmoCh02G015230 vs. NCBI nr
Match: XP_022958541.1 (ethylene-responsive transcription factor ERF026-like [Cucurbita moschata])

HSP 1 Score: 335.1 bits (858), Expect = 3.5e-88
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60
           MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV
Sbjct: 1   MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60

Query: 61  AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSGNTA 120
           AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSGNTA
Sbjct: 61  AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSGNTA 120

Query: 121 SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL 171
           SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL
Sbjct: 121 SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL 170

[Close]

BLAST of CmoCh02G015230 vs. NCBI nr
Match: KAG6606123.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.4 bits (838), Expect = 7.3e-86
Identity = 167/170 (98.24%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60
           MASLTSSSSSSSST KHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV
Sbjct: 1   MASLTSSSSSSSSTKKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60

Query: 61  AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSGNTA 120
           AALALRGDQAILNFPSSVASYPVP STSPLDIRNAASAAANALNKVET STNIEDSGNTA
Sbjct: 61  AALALRGDQAILNFPSSVASYPVPVSTSPLDIRNAASAAANALNKVETSSTNIEDSGNTA 120

Query: 121 SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL 171
           SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL
Sbjct: 121 SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL 170

[Close]

BLAST of CmoCh02G015230 vs. NCBI nr
Match: XP_023521236.1 (ethylene-responsive transcription factor ERF026-like [Cucurbita pepo subsp. pepo] >XP_023521505.1 ethylene-responsive transcription factor ERF026-like [Cucurbita pepo subsp. pepo] >XP_023532975.1 ethylene-responsive transcription factor ERF026-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.5 bits (820), Expect = 8.9e-84
Identity = 164/171 (95.91%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60
           MASLTSSS+SSSST KHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV
Sbjct: 1   MASLTSSSASSSSTKKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60

Query: 61  AALALRGDQAILNFPSSVASYPVPASTSPLDIRN-AASAAANALNKVETCSTNIEDSGNT 120
           AALALRGDQAILNFPSSVASYPVP STSPLDIRN AA+AAANALNKVETC TNIEDSGNT
Sbjct: 61  AALALRGDQAILNFPSSVASYPVPVSTSPLDIRNAAAAAAANALNKVETCRTNIEDSGNT 120

Query: 121 ASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYFL 171
           ASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDG ECLWNYFL
Sbjct: 121 ASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGAECLWNYFL 171

[Close]

BLAST of CmoCh02G015230 vs. NCBI nr
Match: XP_022996100.1 (ethylene-responsive transcription factor ERF026-like [Cucurbita maxima])

HSP 1 Score: 313.9 bits (803), Expect = 8.4e-82
Identity = 164/181 (90.61%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 1   MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60
           MASLTSSSSSSSST KHPLYRGIRCR GKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV
Sbjct: 1   MASLTSSSSSSSSTKKHPLYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60

Query: 61  AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAAS---AAANALNKVETCSTNIE--- 120
           AALALRGDQAI+NFPSS+ASYP+PASTSPLDIRNAAS   AAANALNKVETCSTNIE   
Sbjct: 61  AALALRGDQAIINFPSSIASYPLPASTSPLDIRNAASAAAAAANALNKVETCSTNIEDTT 120

Query: 121 -----DSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNYF 171
                DSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPR+NSPPLSDDNSDGTECLWNYF
Sbjct: 121 ITNIRDSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPRINSPPLSDDNSDGTECLWNYF 180

[Close]

BLAST of CmoCh02G015230 vs. NCBI nr
Match: KAG7036065.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 309.7 bits (792), Expect = 1.6e-80
Identity = 161/165 (97.58%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MASLTSSSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60
           MASLTSSSSSSSST KHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV
Sbjct: 1   MASLTSSSSSSSSTKKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDV 60

Query: 61  AALALRGDQAILNFPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSGNTA 120
           AALALRGDQAILNFPSSVASYPVP STSPLDIRNAASAAANALNKVET STNIEDSGNTA
Sbjct: 61  AALALRGDQAILNFPSSVASYPVPVSTSPLDIRNAASAAANALNKVETSSTNIEDSGNTA 120

Query: 121 SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECL 166
           SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTE L
Sbjct: 121 SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTEFL 165

[Close]

BLAST of CmoCh02G015230 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.1e-42
Identity = 97/188 (51.60%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 7   SSSSSSSTTKHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALR 66
           +S+   S  K P+YRGIRCR GKWVSEIREPRKTTRIWLGT+P  EMAA AYDVAA+AL+
Sbjct: 6   ASAGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALK 65

Query: 67  GDQAILNFPSSVASYPVPASTSPLDIRNAASAAA--------------------NALNKV 126
           G +A+LNFP SV SYPVP STS  DIR AA+AAA                    ++ ++ 
Sbjct: 66  GREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRA 125

Query: 127 ETCSTNIEDSGNTA----SFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGT 169
             C  +  D G+++     F+DEEE+  MP+LLA+MAEGMMV+PP       SDD+ + +
Sbjct: 126 RECHVD-NDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENS 185

[Close]

BLAST of CmoCh02G015230 vs. TAIR 10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 6.0e-38
Identity = 88/171 (51.46%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 16  KHPLYRGIRCRGGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALRGDQAILNFP 75
           KH ++RGIR R GKWVSEIREPRKTTRIWLGT+P PEMAA AYDVAALAL+G  A+LNFP
Sbjct: 61  KHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFP 120

Query: 76  SSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNI-------------EDSGNTAS- 135
               +Y  P S S  DIR AAS AA      +     +             E S N+ S 
Sbjct: 121 GLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVSCNSCSL 180

Query: 136 -FVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGT---ECLWNY 169
            F+DEE +  MP+LL +MAEGM++SPPRM   P  +D+S      + LW+Y
Sbjct: 181 EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of CmoCh02G015230 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 90/180 (50.00%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 9   SSSSSTTKHPLYRGIRCR--GGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALR 68
           +S  +  +HPLYRG+R R    KWVSEIREPRK  RIWLGTF TPEMAA AYDVAALAL+
Sbjct: 4   TSKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALK 63

Query: 69  GDQAILNFPSSVASYPVPASTSPLDIRNAASAAANAL-----------NKVET----CST 128
           G QA LNFP+SV+S P P S SP DI+ AA++AA A            N  +T    C  
Sbjct: 64  GSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMN 123

Query: 129 NIEDSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPR---MNSPPLSDDNSDGTECLWNY 169
           +  D+ N   F+DE+ +F MP++L +MAEGM++SPPR    ++   +D    G + LWN+
Sbjct: 124 SSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

[Close]

BLAST of CmoCh02G015230 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-34
Identity = 84/172 (48.84%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 15  TKHPLYRGIRCR-GGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALRGDQAILN 74
           T+HP+YRG+R R  GKWVSE+REP K TRIWLGTF T EMAA A+DVAALALRG  A LN
Sbjct: 43  TRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLN 102

Query: 75  FPSSVASYPVPASTSPLDIRNAASAAANALNKVETCSTNIEDSG---------------- 134
           F  S     +P ST   DI+ AA+ AA A    ETC T   + G                
Sbjct: 103 FADSAWRLRIPESTCAKDIQKAAAEAALAFQD-ETCDTTTTNHGLDMEETMVEAIYTPEQ 162

Query: 135 -NTASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNY 169
              A ++DEE +FGMP+LL +MAEGM++ PP +      D   DG   LW+Y
Sbjct: 163 SEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

[Close]

BLAST of CmoCh02G015230 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 124.8 bits (312), Expect = 6.7e-29
Identity = 73/175 (41.71%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 15  TKHPLYRGIRCR-GGKWVSEIREPRKTTRIWLGTFPTPEMAATAYDVAALALRGDQAILN 74
           T+HP+YRG+R R  GKWV E+REP K +RIWLGTFPT EMAA A+DVAALALRG  A LN
Sbjct: 49  TRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLN 108

Query: 75  FPSSVASYPVPASTSPLDIRNAASAAANALNKVETC--------------------STNI 134
           F  S     +P +T P +I+ AAS AA A     T                         
Sbjct: 109 FADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRA 168

Query: 135 EDSGNTASFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPLSDDNSDGTECLWNY 169
           E+      ++D+E + GMP+   +MAEGM++ PP +     +D +  G   LW++
Sbjct: 169 EEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNH-NDFDGVGDVSLWSF 222

The following BLAST results are available for this feature:

BLAST of CmoCh02G015230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAN9	5.0e-45	57.06	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38Q39	4.4e-41	51.60	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FJ90	8.5e-37	51.46	Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SJR0	1.9e-36	50.00	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93835	3.3e-33	48.84	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CmoCh02G015230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2C4	1.7e-88	100.00	ethylene-responsive transcription factor ERF026-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1K5S4	4.0e-82	90.61	ethylene-responsive transcription factor ERF026-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E354	8.8e-61	70.21	ethylene-responsive transcription factor ERF027-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1DZ30	3.7e-59	69.84	ethylene-responsive transcription factor ERF026-like OS=Momordica charantia OX=3...	[more]
A0A6J1HYE3	3.1e-58	69.47	ethylene-responsive transcription factor ERF027-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of CmoCh02G015230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958541.1	3.5e-88	100.00	ethylene-responsive transcription factor ERF026-like [Cucurbita moschata]	[more]
KAG6606123.1	7.3e-86	98.24	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023521236.1	8.9e-84	95.91	ethylene-responsive transcription factor ERF026-like [Cucurbita pepo subsp. pepo...	[more]
XP_022996100.1	8.4e-82	90.61	ethylene-responsive transcription factor ERF026-like [Cucurbita maxima]	[more]
KAG7036065.1	1.6e-80	97.58	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of CmoCh02G015230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12630.1	3.1e-42	51.60	Integrase-type DNA-binding superfamily protein	[more]
AT5G52020.1	6.0e-38	51.46	Integrase-type DNA-binding superfamily protein	[more]
AT2G36450.1	1.3e-37	50.00	Integrase-type DNA-binding superfamily protein	[more]
AT4G25490.1	2.4e-34	48.84	C-repeat/DRE binding factor 1	[more]
AT5G51990.1	6.7e-29	41.71	C-repeat-binding factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 57..77 score: 57.14 coord: 20..31 score: 38.48
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 19..81 e-value: 7.1E-29 score: 111.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 18..67 e-value: 1.3E-10 score: 41.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 19..75 score: 19.927988
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 18..77 e-value: 4.68855E-28 score: 97.3422
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 19..77 e-value: 6.4E-21 score: 76.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31985:SF218	ETHYLENE RESPONSE FACTOR	coord: 8..169
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 8..169
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 19..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G015230.1	CmoCh02G015230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity